ONTOLOGY REPORT - ANNOTATIONS
Term: positive regulation of macroautophagy
Accession: GO:0016239
browse the term
Definition: Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.
Synonyms: exact_synonym: positive regulation of starvation-induced autophagy; up regulation of macroautophagy; upregulation of macroautophagy
narrow_synonym: activation of macroautophagy; stimulation of macroautophagy
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Bnip3
BCL2 interacting protein 3
acts_upstream_of_or_within
ISO IEA
UniProtKB:O60238 (PMID:19273585) GO_REF:0000107
RGD Ensembl
PMID:19273585
GO_REF:0000107
NCBI chr 1:203,137,778...203,154,962
Ensembl chr 1:203,137,778...203,154,962
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Bnip3l
BCL2 interacting protein 3 like
acts_upstream_of_or_within
ISO IEA
UniProtKB:Q12983 (PMID:19273585) GO_REF:0000107
RGD Ensembl
PMID:19273585
GO_REF:0000107
NCBI chr15:45,350,081...45,373,213
Ensembl chr15:45,334,537...45,373,282
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Dcn
decorin
acts_upstream_of_or_within
ISO
UniProtKB:P35968 (PMID:23798385)
RGD
PMID:23798385
NCBI chr 7:34,167,973...34,208,004
Ensembl chr 7:34,163,011...34,218,926
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Epm2a
EPM2A glucan phosphatase, laforin
acts_upstream_of_or_within
ISO IEA
(PMID:20453062) GO_REF:0000107 MGI:102548|MGI:2182627 (PMID:20453062)
RGD Ensembl
PMID:20453062
GO_REF:0000107
NCBI chr 1:7,547,369...7,673,449
Ensembl chr 1:7,547,342...7,669,604
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Gnai3
G protein subunit alpha i3
involved_in
ISO
(PMID:12642577)
RGD
PMID:12642577
NCBI chr 2:198,430,920...198,468,874
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Gpsm1
G-protein signaling modulator 1
involved_in
ISO
(PMID:12642577)
RGD
PMID:12642577
NCBI chr 3:29,538,929...29,565,921
Ensembl chr 3:29,526,802...29,565,920
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Hif1a
hypoxia inducible factor 1 subunit alpha
acts_upstream_of_or_within
ISO IEA
MGI:2386679 (PMID:19273585) GO_REF:0000107
RGD Ensembl
PMID:19273585
GO_REF:0000107
NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:98,359,910...98,405,323
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Hmox1
heme oxygenase 1
acts_upstream_of_or_within
ISO IEA
MGI:2429784 (PMID:20705711) GO_REF:0000107
RGD Ensembl
PMID:20705711
GO_REF:0000107
NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,472,884...13,479,818
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Ikbkg
inhibitor of nuclear factor kappa B kinase regulatory subunit gamma
involved_in
ISO
(PMID:23778976)
RGD
PMID:23778976
NCBI chr X:157,358,279...157,397,563
Ensembl chr X:157,367,639...157,392,757
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Il4
interleukin 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:26416964)
UniProt RGD
PMID:26416964
GO_REF:0000024
NCBI chr10:38,272,003...38,277,549
Ensembl chr10:38,272,003...38,277,549
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Kdr
kinase insert domain receptor
acts_upstream_of_or_within
ISO IEA
UniProtKB:P07585 (PMID:23798385) GO_REF:0000107
RGD Ensembl
PMID:23798385
GO_REF:0000107
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,572,049...32,615,192
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Larp1
La ribonucleoprotein 1, translational regulator
involved_in
ISO IEA
(PMID:22354037) GO_REF:0000107
RGD Ensembl
PMID:22354037
GO_REF:0000107
NCBI chr10:42,691,833...42,746,816
Ensembl chr10:42,691,600...42,746,816
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Map3k7
mitogen activated protein kinase kinase kinase 7
involved_in
ISO
(PMID:23778976)
RGD
PMID:23778976
NCBI chr 5:51,149,524...51,212,012
Ensembl chr 5:51,154,352...51,212,012
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Pafah1b2
platelet-activating factor acetylhydrolase 1b, catalytic subunit 2
involved_in
ISO IEA
(PMID:22354037) GO_REF:0000107
RGD Ensembl
PMID:22354037
GO_REF:0000107
NCBI chr 8:55,156,778...55,208,800
Ensembl chr 8:55,156,779...55,176,836
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Pim2
Pim-2 proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO IEA
(PMID:17476689) GO_REF:0000107
RGD Ensembl
PMID:17476689
GO_REF:0000107
NCBI chr X:17,289,509...17,294,778
Ensembl chr X:17,289,509...17,294,778
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Pink1
PTEN induced kinase 1
involved_in
ISO IEA
(PMID:20871098) GO_REF:0000107
RGD Ensembl
PMID:20871098
GO_REF:0000107
NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:155,813,838...155,825,950
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Rab12
RAB12, member RAS oncogene family
involved_in
ISO
(PMID:23357852)
RGD
PMID:23357852
NCBI chr 9:113,927,119...113,953,722
Ensembl chr 9:113,927,119...113,953,695
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RGD1359108
similar to RIKEN cDNA 3110043O21
involved_in
ISO IEA ISS
UniProtKB:Q96DA2 (PMID:27103069), (PMID:27334615) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27103069 PMID:27334615
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:54,562,570...54,587,649
Ensembl chr 5:54,562,570...54,587,637
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Rufy4
RUN and FYVE domain containing 4
involved_in
ISO IEA IBA
(PMID:26416964) GO_REF:0000107 GO_REF:0000002 GO_REF:0000033
RGD Ensembl InterPro GO_Central
PMID:26416964
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr 9:83,152,139...83,172,683
Ensembl chr 9:83,154,445...83,172,897
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Scoc
short coiled-coil protein
involved_in
ISO ISS
(PMID:22354037) GO_REF:0000024
RGD GO_Central
PMID:22354037
GO_REF:0000024
NCBI chr19:41,564,166...41,593,932
Ensembl chr19:41,564,112...41,597,912
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Sesn1
sestrin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:46,876,918...46,970,010
Ensembl chr20:46,876,895...46,970,010
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Sesn2
sestrin 2
involved_in
ISO IEA IBA
(PMID:23274085) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:23274085
GO_REF:0000033 GO_REF:0000107
NCBI chr 5:149,986,304...150,005,255
Ensembl chr 5:149,986,317...150,005,255
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Sesn3
sestrin 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:19,415,307...19,470,943
Ensembl chr 8:19,415,347...19,466,904
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Sirt1
sirtuin 1
involved_in
ISO IEA
(PMID:18296641) GO_REF:0000107 (PMID:18296641), (PMID:21189328)
RGD Ensembl
PMID:18296641 PMID:21189328
GO_REF:0000107
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,305,476...25,328,000
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Sting1
stimulator of interferon response cGAMP interactor 1
involved_in
ISS IEA ISO IBA
GO_REF:0000024 GO_REF:0000107 (PMID:30568238) GO_REF:0000033 (PMID:30568238), (PMID:30842662), (PMID:37535724)
UniProt Ensembl RGD GO_Central
PMID:30568238 PMID:30842662 PMID:37535724
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr18:27,606,196...27,612,544
Ensembl chr18:27,606,196...27,611,947
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Supt5h
SPT5 homolog, DSIF elongation factor subunit
involved_in
ISO IEA
(PMID:22354037) GO_REF:0000107
RGD Ensembl
PMID:22354037
GO_REF:0000107
NCBI chr 1:92,714,276...92,745,489
Ensembl chr 1:92,714,281...92,744,445
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Tbk1
TANK-binding kinase 1
involved_in
ISO IEA
(PMID:27103069) GO_REF:0000117 GO_REF:0000107
RGD UniProt Ensembl
PMID:27103069
GO_REF:0000107 GO_REF:0000117
NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:58,963,325...58,996,357
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Trim13
tripartite motif-containing 13
involved_in
ISO IBA IEA
(PMID:22178386) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:22178386
GO_REF:0000033 GO_REF:0000107
NCBI chr15:39,909,587...39,948,719
Ensembl chr15:39,902,284...39,958,892
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Tsc1
TSC complex subunit 1
IDA
RGD
PMID:23435171
RGD:10448950
NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:32,367,670...32,416,568
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Tsc2
TSC complex subunit 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23778976) (PMID:20453062) UniProtKB:Q61037 (PMID:23778976)
Ensembl RGD
PMID:20453062 PMID:23778976
GO_REF:0000107
NCBI chr10:14,125,679...14,160,317
Ensembl chr10:14,125,680...14,160,600
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Wac
WW domain containing adaptor with coiled-coil
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr17:60,617,702...60,677,771
Ensembl chr17:60,617,544...60,679,267
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Wdr24
WD repeat domain 24
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:15,346,835...15,353,384
Ensembl chr10:15,348,241...15,353,582
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Bag3
BAG cochaperone 3
involved_in
ISO IEA
(PMID:18006506) GO_REF:0000107
RGD Ensembl
PMID:18006506
GO_REF:0000107
NCBI chr 1:192,533,460...192,557,281
Ensembl chr 1:192,475,828...192,557,280
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Csnk2a1
casein kinase 2 alpha 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:22017874)
UniProt RGD
PMID:22017874
GO_REF:0000024
NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:161,170,405...161,215,698
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Hspb8
heat shock protein family B (small) member 8
involved_in
ISO IEA
(PMID:18006506) GO_REF:0000107
RGD Ensembl
PMID:18006506
GO_REF:0000107
NCBI chr12:45,835,899...45,866,449
Ensembl chr12:45,837,066...45,851,937
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Htt
huntingtin
involved_in
IEA ISO
GO_REF:0000107 (PMID:25686248)
Ensembl RGD
PMID:25686248
GO_REF:0000107
NCBI chr14:80,070,456...80,219,668
Ensembl chr14:80,070,456...80,219,668
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Kat5
lysine acetyltransferase 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:31857589)
Ensembl RGD
PMID:31857589
GO_REF:0000107
NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:212,325,090...212,332,587
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Zdhhc19
zinc finger DHHC-type palmitoyltransferase 19
involved_in
ISO IEA
(PMID:37802024) GO_REF:0000107
RGD Ensembl
PMID:37802024
GO_REF:0000107
NCBI chr11:81,782,899...81,794,105
Ensembl chr11:81,782,903...81,794,008
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Atg2a
autophagy related 2A
involved_in
ISO IEA
(PMID:30952800), (PMID:31271352) GO_REF:0000107
RGD Ensembl
PMID:30952800 PMID:31271352
GO_REF:0000107
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:212,971,844...212,991,528
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Atg7
autophagy related 7
IMP
RGD
PMID:33372336
RGD:407571673
NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:149,391,390...149,598,319
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Atm
ATM serine/threonine kinase
acts_upstream_of_or_within
ISO
(PMID:37943659)
RGD
PMID:37943659
NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629
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Becn1
beclin 1
IMP
RGD
PMID:25561470
RGD:11561937
NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,731,650...86,747,002
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Chek2
checkpoint kinase 2
acts_upstream_of_or_within
ISO
(PMID:37943659)
RGD
PMID:37943659
NCBI chr12:51,448,838...51,481,159
Ensembl chr12:51,449,140...51,480,667
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Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
ISO IEA
(PMID:21072319) GO_REF:0000107
RGD Ensembl
PMID:21072319
GO_REF:0000107
NCBI chr 2:198,777,323...198,856,497
Ensembl chr 2:198,777,323...198,856,497
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Lrsam1
leucine rich repeat and sterile alpha motif containing 1
involved_in
ISO IEA
(PMID:25484098) GO_REF:0000107
RGD Ensembl
PMID:25484098
GO_REF:0000107
NCBI chr 3:36,621,042...36,661,932
Ensembl chr 3:36,621,042...36,661,825
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Moap1
modulator of apoptosis 1
involved_in
ISO
(PMID:33783314)
RGD
PMID:33783314
NCBI chr 6:127,647,389...127,649,324
Ensembl chr 6:127,613,488...127,669,324
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Pip4k2a
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr17:86,405,080...86,576,597
Ensembl chr17:86,405,081...86,576,430
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Pip4k2b
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr10:83,202,379...83,231,292
Ensembl chr10:83,197,287...83,231,292
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Pip4k2c
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr 7:64,905,322...64,920,380
Ensembl chr 7:64,905,328...64,920,373
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Rab3gap1
RAB3 GTPase activating protein catalytic subunit 1
involved_in
ISO ISS IEA IBA
(PMID:25495476) GO_REF:0000024 GO_REF:0000107 GO_REF:0000033
RGD GO_Central Ensembl
PMID:25495476
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr13:41,908,179...41,981,611
Ensembl chr13:41,908,051...41,981,611
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Rab3gap2
RAB3 GTPase activating non-catalytic protein subunit 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:25495476) GO_REF:0000107
GO_Central RGD Ensembl
PMID:25495476
GO_REF:0000024 GO_REF:0000107
NCBI chr13:99,288,984...99,362,817
Ensembl chr13:99,288,647...99,361,053
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Ralb
RAS like proto-oncogene B
involved_in
ISO IEA
(PMID:24056301) GO_REF:0000107
RGD Ensembl
PMID:24056301
GO_REF:0000107
NCBI chr13:33,140,834...33,176,997
Ensembl chr13:33,140,835...33,176,998
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Sh3glb1
SH3 domain -containing GRB2-like endophilin B1
involved_in
ISO IEA
(PMID:21068542) GO_REF:0000107
RGD Ensembl
PMID:21068542
GO_REF:0000107
NCBI chr 2:236,411,194...236,445,225
Ensembl chr 2:236,410,436...236,445,140
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Snx18
sorting nexin 18
involved_in
ISO IEA
(PMID:29437695) GO_REF:0000107
RGD Ensembl
PMID:29437695
GO_REF:0000107
NCBI chr 2:46,965,498...46,991,516
Ensembl chr 2:46,965,498...46,991,516
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Snx30
sorting nexin family member 30
involved_in
ISO IEA
(PMID:32513819) GO_REF:0000107
RGD Ensembl
PMID:32513819
GO_REF:0000107
NCBI chr 5:79,478,804...79,608,118
Ensembl chr 5:79,478,912...79,607,052
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Snx4
sorting nexin 4
involved_in
ISO IBA IEA
(PMID:32513819), (PMID:33468622) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:32513819 PMID:33468622
GO_REF:0000033 GO_REF:0000107
NCBI chr11:80,965,965...81,023,234
Ensembl chr11:80,965,967...81,028,448
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Snx7
sorting nexin 7
involved_in
ISO IEA
(PMID:32513819) GO_REF:0000107
RGD Ensembl
PMID:32513819
GO_REF:0000107
NCBI chr 2:208,528,041...208,612,597
Ensembl chr 2:208,528,049...208,613,075
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Trim32
tripartite motif-containing 32
involved_in
ISO
(PMID:37943659)
RGD
PMID:37943659
NCBI chr 5:84,020,604...84,031,483
Ensembl chr 5:84,014,803...84,042,748
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Ulk1
unc-51 like autophagy activating kinase 1
IMP
RGD
PMID:23448468
RGD:13208863
NCBI chr12:51,511,492...51,537,746
Ensembl chr12:51,511,492...51,537,746
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Usp33
ubiquitin specific peptidase 33
involved_in
ISO
(PMID:24056301)
RGD
PMID:24056301
NCBI chr 2:243,938,958...243,988,424
Ensembl chr 2:243,943,175...243,988,424
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Wdr45
WD repeat domain 45
involved_in
ISO ISS IEA
(PMID:31271352) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:31271352
GO_REF:0000024 GO_REF:0000107
NCBI chr X:17,448,195...17,454,117
Ensembl chr X:17,448,207...17,454,117
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Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
ISO IEA
(PMID:31271352) GO_REF:0000107
RGD Ensembl
PMID:31271352
GO_REF:0000107
NCBI chr10:95,042,451...95,079,679
Ensembl chr10:95,042,441...95,079,293
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Adrb2
adrenoceptor beta 2
involved_in
ISO IEA ISS
(PMID:23708524) GO_REF:0000107 GO_REF:0000024
RGD Ensembl GO_Central
PMID:23708524
GO_REF:0000024 GO_REF:0000107
NCBI chr18:57,912,760...57,914,802
Ensembl chr18:57,911,348...57,914,803
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Calcoco2
calcium binding and coiled-coil domain 2
involved_in
ISO
(PMID:25771791)
RGD
PMID:25771791
NCBI chr10:81,552,084...81,568,266
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Clec16a
C-type lectin domain containing 16A
acts_upstream_of_or_within
ISO
MGI:5648633 (PMID:24949970)
RGD
PMID:24949970
NCBI chr10:5,434,725...5,631,246
Ensembl chr10:5,434,725...5,630,619
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Fyco1
FYVE and coiled-coil domain autophagy adaptor 1
involved_in
ISO IEA IBA
(PMID:26468287) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:26468287
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:132,289,538...132,356,810
Ensembl chr 8:132,289,539...132,356,451
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Irgm
immunity-related GTPase M
involved_in
ISO IEA
(PMID:16888103) GO_REF:0000107
RGD Ensembl
PMID:16888103
GO_REF:0000107
NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228
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Smcr8
SMCR8-C9orf72 complex subunit
involved_in
ISO IEA
(PMID:28195531) GO_REF:0000107
RGD Ensembl
PMID:28195531
GO_REF:0000107
NCBI chr10:45,957,146...45,968,388
Ensembl chr10:45,957,104...45,968,389
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Tom1
target of myb1 membrane trafficking protein
involved_in
ISO IEA
(PMID:23023224) GO_REF:0000107
RGD Ensembl
PMID:23023224
GO_REF:0000107
NCBI chr19:13,405,482...13,440,384
Ensembl chr19:13,411,157...13,446,110
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Adrb2
adrenoceptor beta 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:23708524) GO_REF:0000107
GO_Central RGD Ensembl
PMID:23708524
GO_REF:0000024 GO_REF:0000107
NCBI chr18:57,912,760...57,914,802
Ensembl chr18:57,911,348...57,914,803
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Htt
huntingtin
involved_in
ISO IEA
(PMID:25686248) GO_REF:0000107
RGD Ensembl
PMID:25686248
GO_REF:0000107
NCBI chr14:80,070,456...80,219,668
Ensembl chr14:80,070,456...80,219,668
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Sesn2
sestrin 2
acts_upstream_of_or_within
ISO IEA
MGI:3587950 (PMID:22958918) GO_REF:0000107
RGD Ensembl
PMID:22958918
GO_REF:0000107
NCBI chr 5:149,986,304...150,005,255
Ensembl chr 5:149,986,317...150,005,255
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Sptlc1
serine palmitoyltransferase, long chain base subunit 1
acts_upstream_of_or_within
ISO
(PMID:25332431)
RGD
PMID:25332431
NCBI chr17:12,029,189...12,068,234
Ensembl chr17:12,029,189...12,068,234
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Sptlc2
serine palmitoyltransferase, long chain base subunit 2
acts_upstream_of_or_within
ISO IEA
(PMID:25332431) GO_REF:0000107
RGD Ensembl
PMID:25332431
GO_REF:0000107
NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:112,679,623...112,762,640
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Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO IEA
(PMID:30217973) GO_REF:0000107
RGD Ensembl
PMID:30217973
GO_REF:0000107
NCBI chr 3:98,156,626...98,345,876
Ensembl chr 3:98,156,652...98,345,872
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Atg7
autophagy related 7
IMP
RGD
PMID:37042059
RGD:407532700
NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:149,391,390...149,598,319
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Cers1
ceramide synthase 1
involved_in
ISO
(PMID:22922758)
RGD
PMID:22922758
NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480
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Dele1
DAP3 binding cell death enhancer 1
involved_in
ISO IEA
(PMID:38340717) GO_REF:0000107
RGD Ensembl
PMID:38340717
GO_REF:0000107
NCBI chr18:30,325,369...30,349,285
Ensembl chr18:30,336,308...30,349,938
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Eif2ak1
eukaryotic translation initiation factor 2 alpha kinase 1
involved_in
ISO IEA ISS
(PMID:38340717) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:38340717
GO_REF:0000024 GO_REF:0000107
NCBI chr12:15,824,431...15,858,266
Ensembl chr12:15,825,124...15,858,281
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Fbxo7
F-box protein 7
involved_in
IMP IEA ISO
PMID:26310625 GO_REF:0000107 (PMID:26310625)
Ensembl RGD
PMID:26310625 PMID:26310625
GO_REF:0000107, RGD:11536096
NCBI chr 7:19,696,951...19,725,180
Ensembl chr 7:19,696,961...19,725,180
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Gdf1
growth differentiation factor 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480
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Htt
huntingtin
involved_in
IEA ISO
GO_REF:0000107 (PMID:25686248)
Ensembl RGD
PMID:25686248
GO_REF:0000107
NCBI chr14:80,070,456...80,219,668
Ensembl chr14:80,070,456...80,219,668
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Irgm
immunity-related GTPase M
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:33510463) (PMID:21102437) (PMID:32939830)
UniProt Ensembl RGD
PMID:21102437 PMID:32939830 PMID:33510463
GO_REF:0000024 GO_REF:0000107
NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228
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Nod2
nucleotide-binding oligomerization domain containing 2
involved_in
ISO
(PMID:31919280)
RGD
PMID:31919280
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846
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Oma1
OMA1 zinc metallopeptidase
acts_upstream_of_or_within
ISO
(PMID:38340717)
RGD
PMID:38340717
NCBI chr 5:123,312,038...123,455,540
Ensembl chr 5:123,312,766...123,366,005
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
IMP IEA ISO
GO_REF:0000107 (PMID:26310625)
Ensembl RGD
PMID:26310625 PMID:28608965
GO_REF:0000107, RGD:13432560
NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:51,210,330...52,430,304
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Slc25a4
solute carrier family 25 member 4
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:31618756) GO_REF:0000107
UniProt RGD Ensembl
PMID:31618756
GO_REF:0000024 GO_REF:0000107
NCBI chr16:52,805,521...52,809,316
Ensembl chr16:52,805,523...52,811,700
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Slc25a5
solute carrier family 25 member 5
involved_in
ISS ISO
GO_REF:0000024 (PMID:31618756)
UniProt RGD
PMID:31618756
GO_REF:0000024
NCBI chr X:120,897,616...120,900,683
Ensembl chr X:120,897,563...120,900,688
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Stub1
STIP1 homology and U-box containing protein 1
involved_in
IMP
PMID:29934347
UniProt
PMID:29934347
RGD:405650300
NCBI chr10:15,355,278...15,357,559
Ensembl chr10:15,355,279...15,357,559
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Ube2a
ubiquitin-conjugating enzyme E2A
involved_in
ISO IEA
(PMID:23685073) GO_REF:0000107
RGD Ensembl
PMID:23685073
GO_REF:0000107
NCBI chr X:120,979,993...120,990,773
Ensembl chr X:120,978,790...120,990,750
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Vps13d
vacuolar protein sorting 13 homolog D
involved_in
ISO IEA
(PMID:29307555) GO_REF:0000107
RGD Ensembl
PMID:29307555
GO_REF:0000107
NCBI chr 5:162,113,732...162,339,121
Ensembl chr 5:162,113,732...162,339,099
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Cdk5rap3
CDK5 regulatory subunit associated protein 3
involved_in
ISO IEA ISS
(PMID:32851973), (PMID:36543799) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:32851973 PMID:36543799
GO_REF:0000024 GO_REF:0000107
NCBI chr10:82,390,845...82,402,814
Ensembl chr10:82,390,845...82,400,001
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Ddrgk1
DDRGK domain containing 1
involved_in
ISO IEA
(PMID:36543799) GO_REF:0000107
RGD Ensembl
PMID:36543799
GO_REF:0000107
NCBI chr 3:138,315,006...138,336,691
Ensembl chr 3:138,315,282...138,335,766
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Ufl1
Ufm1-specific ligase 1
involved_in
ISO IEA ISS
(PMID:36543799) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:36543799
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:43,759,271...43,791,682
Ensembl chr 5:43,758,098...43,791,682
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Atp5if1
ATP synthase inhibitory factor subunit 1
involved_in
ISO
(PMID:24005319)
RGD
PMID:24005319
NCBI chr 5:150,022,960...150,026,677
Ensembl chr 5:150,022,960...150,026,677
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Cdc37
cell division cycle 37, HSP90 cochaperone
involved_in
ISO
(PMID:21855797)
RGD
PMID:21855797
NCBI chr 8:27,954,292...27,966,935
Ensembl chr 8:27,948,016...27,983,931
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Gba1
glucosylceramidase beta 1
acts_upstream_of_or_within
ISO IEA
(PMID:23707074) GO_REF:0000107
RGD Ensembl
PMID:23707074
GO_REF:0000107
NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:176,907,154...176,916,985
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Hdac6
histone deacetylase 6
involved_in
ISO IEA
UniProtKB:Q9JK66 (PMID:20457763) GO_REF:0000107
RGD Ensembl
PMID:20457763
GO_REF:0000107
NCBI chr X:17,222,538...17,244,373
Ensembl chr X:17,222,856...17,244,370
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Hk2
hexokinase 2
involved_in
ISO IEA
(PMID:23962723) GO_REF:0000107
RGD Ensembl
PMID:23962723
GO_REF:0000107
NCBI chr 4:116,792,258...116,841,275
Ensembl chr 4:116,792,258...116,841,275
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Huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:30217973)
RGD
PMID:30217973
NCBI chr X:24,350,708...24,480,798
Ensembl chr X:24,353,217...24,480,798
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Mul1
mitochondrial E3 ubiquitin protein ligase 1
involved_in
ISO IEA
(PMID:24709290) GO_REF:0000107
RGD Ensembl
PMID:24709290
GO_REF:0000107
NCBI chr 5:155,936,112...155,945,163
Ensembl chr 5:155,936,111...155,945,163
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Pink1
PTEN induced kinase 1
involved_in
ISO IEA
(PMID:20871098) GO_REF:0000107
RGD Ensembl
PMID:20871098
GO_REF:0000107
NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:155,813,838...155,825,950
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO IEA
(PMID:20457763), (PMID:20871098), (PMID:23212910) GO_REF:0000107
RGD Ensembl
PMID:20457763 PMID:20871098 PMID:23212910
GO_REF:0000107
NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:51,210,330...52,430,304
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Tomm7
translocase of outer mitochondrial membrane 7
involved_in
ISO
(PMID:24270810)
RGD
PMID:24270810
NCBI chr 4:12,197,503...12,204,344
Ensembl chr 4:12,197,491...12,204,343
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Vdac1
voltage-dependent anion channel 1
involved_in
ISO IEA
(PMID:32047033) GO_REF:0000107
RGD Ensembl
PMID:32047033
GO_REF:0000107
NCBI chr10:37,029,377...37,060,542
Ensembl chr10:37,023,145...37,060,541
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Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:25891078)
RGD
PMID:25891078
NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228
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Lrsam1
leucine rich repeat and sterile alpha motif containing 1
involved_in
ISO IEA
(PMID:23245322) GO_REF:0000107
RGD Ensembl
PMID:23245322
GO_REF:0000107
NCBI chr 3:36,621,042...36,661,932
Ensembl chr 3:36,621,042...36,661,825
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Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (PMID:22033934)
RGD
PMID:22033934
NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:190,797,185...190,803,411
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Nod1
nucleotide-binding oligomerization domain containing 1
acts_upstream_of_or_within
ISO IEA
MGI:2674231 (PMID:22033934) GO_REF:0000107
RGD Ensembl
PMID:22033934
GO_REF:0000107
NCBI chr 4:85,391,142...85,442,281
Ensembl chr 4:85,391,151...85,441,674
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Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:3529594 (PMID:22033934)
RGD
PMID:22033934
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846
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Optn
optineurin
involved_in
ISO IEA
(PMID:21617041) GO_REF:0000107
RGD Ensembl
PMID:21617041
GO_REF:0000107
NCBI chr17:78,118,847...78,169,543
Ensembl chr17:78,118,866...78,169,543
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Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:2660793 (PMID:22033934) GO_REF:0000107
RGD Ensembl
PMID:22033934
GO_REF:0000107
NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663
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Rnf31
ring finger protein 31
involved_in
ISO IEA
(PMID:28481331) GO_REF:0000107
RGD Ensembl
PMID:28481331
GO_REF:0000107
NCBI chr15:33,053,450...33,065,285
Ensembl chr15:33,053,607...33,065,284
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Tbk1
TANK-binding kinase 1
involved_in
ISO IEA
(PMID:21617041) GO_REF:0000107
RGD Ensembl
PMID:21617041
GO_REF:0000107
NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:58,963,325...58,996,357
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Tlr2
toll-like receptor 2
acts_upstream_of_or_within
ISO
MGI:2674036 (PMID:22033934)
RGD
PMID:22033934
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all