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ONTOLOGY REPORT - ANNOTATIONS


Term:process utilizing autophagic mechanism
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Accession:GO:0061919 term browser browse the term
Definition:A cellular process involving delivery of a portion of the cytoplasm to lysosomes or to the plant or fungal vacuole that does not involve direct transport through the endocytic or vacuolar protein sorting (Vps) pathways. This process typically leads to degradation of the cargo; however, it can also be used to deliver resident proteins, such as in the cytoplasm-to-vacuole targeting (Cvt) pathway.


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aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acbd5 acyl-CoA binding domain containing 5 NOT|involved_in ISO (PMID:24535825) RGD PMID:24535825 NCBI chr17:85,206,178...85,248,909
Ensembl chr17:85,206,303...85,248,215
JBrowse link
G Atg5 autophagy related 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5751672|PMID:22982048)
(PMID:22982048)
Ensembl
RGD
PMID:22982048 GO_REF:0000107 MGI:5751672 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO
IBA
ISS
UniProtKB:Q562E7 (PMID:28404643)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:28404643 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:21143716)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21143716 GO_REF:0000024 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Wdfy3 WD repeat and FYVE domain containing 3 involved_in ISO (PMID:20168092), (PMID:20417604) RGD PMID:20168092 PMID:20417604 NCBI chr14:7,578,245...7,810,491
Ensembl chr14:7,606,628...7,810,482
JBrowse link
G Wdr81 WD repeat domain 81 involved_in ISS
ISO
GO_REF:0000024
(PMID:28404643)
UniProt
RGD
PMID:28404643 GO_REF:0000024 NCBI chr10:60,281,969...60,295,374
Ensembl chr10:60,281,972...60,295,296
JBrowse link
autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001519.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07048308.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07072668.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:55,052,756...55,053,109 JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:25215947) RGD PMID:25215947 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atg101 autophagy related 101 involved_in IBA
ISO
PMID:21873635
(PMID:19597335)
RGD PMID:19597335 PMID:21873635 RGD:13792537 NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633
JBrowse link
G Atg12 autophagy related 12 involved_in IBA
ISO
PMID:21873635
(MGI:2137756|PMID:11266458)
RGD PMID:11266458 PMID:21873635 MGI:2137756, RGD:13792537 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg13 autophagy related 13 involved_in
acts_upstream_of_or_within
ISO (PMID:19211835)
(MGI:3849242|PMID:19258318)
RGD PMID:19211835 PMID:19258318 MGI:3849242 NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
JBrowse link
G Atg14 autophagy related 14 involved_in IBA
ISO
PMID:21873635
(PMID:19270696)
RGD PMID:19270696 PMID:21873635 RGD:13792537 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atg16l1 autophagy related 16-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
JBrowse link
G Atg16l2 autophagy related 16-like 2 involved_in
NOT|involved_in
IBA
ISO
PMID:21873635
(MGI:6436405|PMID:22082872)
RGD PMID:22082872 PMID:21873635 MGI:6436405, RGD:13792537 NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
JBrowse link
G Atg2a autophagy related 2A involved_in ISO
IBA
(PMID:28561066)
PMID:21873635
RGD PMID:28561066 PMID:21873635 RGD:13792537 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
JBrowse link
G Atg2b autophagy related 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
JBrowse link
G Atg3 autophagy related 3 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
(MGI:4835103|PMID:20723759)
(MGI:4880808|PMID:21220506)
GO_REF:0000024
RGD
UniProt
PMID:20723759 PMID:21220506 PMID:21873635 GO_REF:0000024 MGI:4835103 MGI:4880808, RGD:13792537 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase involved_in ISO (MGI:5630037|PMID:25578879) RGD PMID:25578879 MGI:5630037 NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IMP
ISO
IBA
(MGI:2137756|PMID:11266458)
(MGI:5500861|PMID:23704209)
PMID:21873635
RGD PMID:11266458 PMID:23704209 PMID:16420522 PMID:21873635 MGI:2137756 MGI:5500861, RGD:1643189, RGD:13792537 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5500861|PMID:23704209)
(MGI:4420830|PMID:20080761)
RGD PMID:20080761 PMID:23704209 PMID:21873635 MGI:4420830 MGI:5500861, RGD:13792537 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within ISO MGI:4417824 (MGI:5494547|PMID:22456507), (MGI:5509287|PMID:23402761)
(PMID:15755735), (PMID:22456507)
RGD PMID:15755735 PMID:22456507 PMID:23402761 MGI:5494547 MGI:5509287 NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atg9b autophagy related 9B acts_upstream_of_or_within ISO (PMID:15755735) RGD PMID:15755735 NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Bag3 BAG cochaperone 3 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Becn1 beclin 1 involved_in IMP
ISO
ISS
IBA
(MGI:5619439|PMID:23332761)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:23332761 PMID:16420522 PMID:21873635 GO_REF:0000024 MGI:5619439, RGD:1643189, RGD:13792537 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Becn2 beclin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,843,528...87,892,343
Ensembl chr13:87,844,531...87,845,787
JBrowse link
G Ctsd cathepsin D acts_upstream_of_or_within ISO (MGI:3057045|PMID:15452145) RGD PMID:15452145 MGI:3057045 NCBI chr 1:197,527,467...197,539,343
Ensembl chr 1:197,527,467...197,539,488
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in IBA
ISO
PMID:21873635
(PMID:21072319)
RGD PMID:21072319 PMID:21873635 RGD:13792537 NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
JBrowse link
G Emc6 ER membrane protein complex subunit 6 involved_in ISO
IBA
(PMID:23182941)
PMID:21873635
RGD PMID:23182941 PMID:21873635 RGD:13792537 NCBI chr10:57,794,072...57,795,671
Ensembl chr10:57,793,685...57,796,217
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:2182627 (MGI:5913112|PMID:24430976) RGD PMID:24430976 MGI:5913112 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:16888103)
(MGI:3656111|PMID:16888103)
RGD PMID:16888103 MGI:3656111 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G LOC100359937 GABA(A) receptor-associated protein-like 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:89,246,175...89,247,132 JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in ISO
IDA
IBA
(PMID:24290141)
PMID:11060023
PMID:21873635
RGD PMID:24290141 PMID:11060023 PMID:21873635 RGD:8554284, RGD:13792537 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
JBrowse link
G Nsfl1c NSFL1 cofactor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
JBrowse link
G Pacs2 phosphofurin acidic cluster sorting protein 2 acts_upstream_of_or_within ISO (PMID:23455425) RGD PMID:23455425 NCBI chr 6:132,096,992...132,156,702
Ensembl chr 6:132,096,901...132,154,583
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
(MGI:5565574|PMID:24098492)
PMID:21873635
RGD PMID:24098492 PMID:12453151 PMID:21873635 MGI:5565574, RGD:2303129, RGD:13792537 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:2149116 (MGI:3057045|PMID:15452145) RGD PMID:15452145 MGI:3057045 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Rab19 RAB19, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:68,157,159...68,166,889
Ensembl chr 4:68,156,881...68,166,886
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO
IBA
ISS
(PMID:22939626)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22939626 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
JBrowse link
G Rab1b RAB1B, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO
IBA
(PMID:22452336)
PMID:21873635
RGD PMID:22452336 PMID:21873635 RGD:13792537 NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
JBrowse link
G Rab33b RAB33B, member RAS oncogene family involved_in ISO (MGI:5447922|PMID:18448665) RGD PMID:18448665 MGI:5447922 NCBI chr 2:135,528,116...135,538,719
Ensembl chr 2:135,528,116...135,538,719
JBrowse link
G Rab43 RAB43, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,249,878...120,269,174
Ensembl chr 4:120,249,879...120,269,174
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:19956673) RGD PMID:19956673 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in ISO
IBA
(PMID:28890335)
PMID:21873635
(MGI:3849242|PMID:19258318)
RGD PMID:19258318 PMID:28890335 PMID:21873635 MGI:3849242, RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Rufy4 RUN and FYVE domain containing 4 involved_in IBA
ISO
PMID:21873635
(PMID:26416964)
RGD PMID:26416964 PMID:21873635 RGD:13792537 NCBI chr 9:75,702,937...75,727,719
Ensembl chr 9:75,703,750...75,723,525
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IBA
ISS
(PMID:30568238), (PMID:30842662)
(MGI:6305034|PMID:30568238)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:30568238 PMID:30842662 PMID:21873635 GO_REF:0000024 MGI:6305034, RGD:13792537 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Stx12 syntaxin 12 involved_in ISO
IEA
(PMID:24095276)
GO_REF:0000107
RGD
Ensembl
PMID:24095276 GO_REF:0000107 NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377
JBrowse link
G Synpo2 synaptopodin 2 involved_in IMP PMID:23434281 UniProt PMID:23434281 RGD:12793031 NCBI chr 2:211,217,099...211,371,267
Ensembl chr 2:211,216,783...211,371,267
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (MGI:6296816|PMID:23908015) RGD PMID:23908015 MGI:6296816 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tmem41b transmembrane protein 41B involved_in ISS
ISO
GO_REF:0000024
(PMID:30093494), (PMID:30126924), (PMID:30933966)
UniProt
RGD
PMID:30093494 PMID:30126924 PMID:30933966 GO_REF:0000024 NCBI chr 1:164,012,585...164,026,967
Ensembl chr 1:164,012,592...164,026,933
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 involved_in ISO
IEA
ISS
IBA
(PMID:19056683)
GO_REF:0000107
GO_REF:0000024
PMID:21873635
RGD
Ensembl
UniProt
PMID:19056683 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:20529957)
Ensembl
RGD
PMID:20529957 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ubqln2 ubiquilin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:17,853,086...17,856,505
Ensembl chr  X:17,853,114...17,856,505
JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,884,253...27,912,709
Ensembl chr 6:27,884,680...27,912,649
JBrowse link
G Ubxn2b UBX domain protein 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO
IBA
(PMID:28890335)
PMID:21873635
(MGI:3849242|PMID:19258318)
RGD PMID:19258318 PMID:28890335 PMID:21873635 MGI:3849242, RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISO
ISS
(PMID:28890335), (PMID:30093494), (PMID:30933966)
GO_REF:0000024
RGD
UniProt
PMID:28890335 PMID:30093494 PMID:30933966 GO_REF:0000024 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISO
IEA
ISS
(PMID:28561066)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28561066 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wdr45b WD repeat domain 45B involved_in ISO (PMID:28561066) RGD PMID:28561066 NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:28561066) RGD PMID:28561066 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:20505359), (PMID:28561066), (PMID:28890335)
UniProt
RGD
PMID:20505359 PMID:28561066 PMID:28890335 GO_REF:0000024 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin acts_upstream_of_or_within ISO MGI:2388888 (MGI:3690270|PMID:16714284) RGD PMID:16714284 MGI:3690270 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Epg5 ectopic P-granules autophagy protein 5 homolog involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5505596 (MGI:5488852|PMID:23479740)
RGD PMID:23479740 PMID:21873635 MGI:5488852, RGD:13792537 NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5805578|PMID:27628032)
PMID:21873635
UniProt
RGD
PMID:27628032 PMID:21873635 GO_REF:0000024 MGI:5805578, RGD:13792537 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G Lix1 limb and CNS expressed 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:58,128,961...58,187,554
Ensembl chr 1:58,128,961...58,185,964
JBrowse link
G Lix1l limb and CNS expressed 1 like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:184,136,018...184,161,918
Ensembl chr 2:184,136,038...184,161,916
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in ISO
IBA
(PMID:28223137)
PMID:21873635
RGD PMID:28223137 PMID:21873635 RGD:13792537 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISO
IBA
(PMID:28223137)
PMID:21873635
RGD PMID:28223137 PMID:21873635 RGD:13792537 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 acts_upstream_of_or_within ISO MGI:3794204 (MGI:4839416|PMID:20600908) RGD PMID:20600908 MGI:4839416 NCBI chr12:1,560,341...1,574,252
Ensembl chr12:1,560,359...1,574,252
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (MGI:6155546|PMID:29514215) RGD PMID:29514215 MGI:6155546 NCBI chr 2:123,822,042...123,882,913
Ensembl chr 2:123,816,614...123,857,971
JBrowse link
G Rubcnl rubicon like autophagy enhancer involved_in ISO
IBA
(PMID:28306502), (PMID:30704899)
(MGI:6282647|PMID:30704899)
PMID:21873635
RGD PMID:28306502 PMID:30704899 PMID:21873635 MGI:6282647, RGD:13792537 NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
JBrowse link
G Snap29 synaptosome associated protein 29 involved_in ISS
ISO
GO_REF:0000024
(PMID:23217709)
UniProt
RGD
PMID:23217709 GO_REF:0000024 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (MGI:4879078|PMID:20920792), (MGI:5504339|PMID:22797916) RGD PMID:20920792 PMID:22797916 MGI:4879078 MGI:5504339 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Snx14 sorting nexin 14 involved_in ISO (PMID:25848753) RGD PMID:25848753 NCBI chr 8:89,283,673...89,390,597
Ensembl chr 8:89,298,114...89,390,580
JBrowse link
G Stx17 syntaxin 17 involved_in ISS
ISO
GO_REF:0000024
(PMID:23217709), (PMID:24554770), (PMID:28306502)
UniProt
RGD
PMID:23217709 PMID:24554770 PMID:28306502 GO_REF:0000024 NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:22342342)
UniProt
RGD
PMID:22342342 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:23459205)
Ensembl
RGD
PMID:23459205 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:28306502) RGD PMID:28306502 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 NOT|involved_in ISO (PMID:23217709) RGD PMID:23217709 NCBI chr12:16,728,477...16,764,261
Ensembl chr12:16,728,524...16,764,097
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 involved_in ISO
ISS
(PMID:23217709)
GO_REF:0000024
RGD
UniProt
PMID:23217709 GO_REF:0000024 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
JBrowse link
G Vcp valosin-containing protein involved_in ISO
IBA
ISS
(PMID:20104022)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20104022 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog NOT|involved_in ISO (PMID:25783203) RGD PMID:25783203 NCBI chr 6:106,888,284...106,913,139
Ensembl chr 6:106,888,284...106,913,117
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:25783203) RGD PMID:25783203 NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in ISO (PMID:24554770), (PMID:25783203) RGD PMID:24554770 PMID:25783203 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393
JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated NOT|involved_in ISO (PMID:25783203) RGD PMID:25783203 NCBI chr 1:134,223,967...134,247,232
Ensembl chr 1:134,223,949...134,246,970
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B NOT|involved_in ISO (PMID:23217709) RGD PMID:23217709 NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 NOT|involved_in ISO (PMID:20505359) RGD PMID:20505359 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
autophagosome membrane docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 involved_in ISO (PMID:25686604) RGD PMID:25686604 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISO
ISS
(PMID:28890335)
GO_REF:0000024
RGD
UniProt
PMID:28890335 GO_REF:0000024 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Calm1 calmodulin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Snap29 synaptosome associated protein 29 involved_in ISO
IEA
(PMID:25686604)
GO_REF:0000107
RGD
Ensembl
PMID:25686604 GO_REF:0000107 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
JBrowse link
G Stx17 syntaxin 17 involved_in ISO (PMID:25686604) RGD PMID:25686604 NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 involved_in ISO
IEA
(PMID:25686604)
GO_REF:0000107
RGD
Ensembl
PMID:25686604 GO_REF:0000107 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
JBrowse link
autophagosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:22186024) RGD PMID:22186024 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha acts_upstream_of_or_within ISO MGI:2685045 (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta acts_upstream_of_or_within ISO MGI:1203729 (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612
JBrowse link
G Ulk3 unc-51 like kinase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:57,992,396...58,000,220
Ensembl chr 8:57,992,723...57,999,467
JBrowse link
autophagosome-endosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rubcnl rubicon like autophagy enhancer involved_in ISO
IBA
(PMID:28306502)
PMID:21873635
RGD PMID:28306502 PMID:21873635 RGD:13792537 NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
JBrowse link
autophagosome-lysosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISO
ISS
(PMID:28325809)
GO_REF:0000024
RGD
UniProt
PMID:28325809 GO_REF:0000024 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:30538141)
(MGI:6273736|PMID:30538141)
RGD PMID:30538141 MGI:6273736 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:5698740|PMID:26450516) RGD PMID:26450516 MGI:5698740 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:6159303|PMID:29727621)
UniProt
RGD
PMID:29727621 GO_REF:0000024 MGI:6159303 NCBI chr17:81,496,669...81,668,180 JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:6159303|PMID:29727621)
UniProt
RGD
PMID:29727621 GO_REF:0000024 MGI:6159303 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 involved_in ISO
ISS
(PMID:28325809)
GO_REF:0000024
RGD
UniProt
PMID:28325809 GO_REF:0000024 NCBI chr10:88,313,837...88,366,182
Ensembl chr10:88,314,651...88,362,412
JBrowse link
G Rubcnl rubicon like autophagy enhancer involved_in ISO
IBA
(PMID:28306502)
PMID:21873635
RGD PMID:28306502 PMID:21873635 RGD:13792537 NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
JBrowse link
G Vps39 VPS39 subunit of HOPS complex involved_in ISO (PMID:33422265) RGD PMID:33422265 NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
JBrowse link
autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07029613.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AABR07040864.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G AC108595.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Ambra1 autophagy and beclin 1 regulator 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3715977 (MGI:3715542|PMID:17589504)
PMID:21873635
RGD PMID:17589504 PMID:21873635 MGI:3715542, RGD:13792537 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Anxa7 annexin A7 involved_in ISO (PMID:24007983) RGD PMID:24007983 NCBI chr15:3,821,798...3,849,659
Ensembl chr15:3,821,845...3,849,385
JBrowse link
G Arfip2 ADP-ribosylation factor interacting protein 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:159,974,255...159,980,398
Ensembl chr 1:159,974,201...159,980,336
JBrowse link
G Arsa arylsulfatase A IDA RGD PMID:8037 RGD:1599235 NCBI chr 7:120,542,788...120,547,577
Ensembl chr 7:120,543,362...120,548,783
JBrowse link
G Arsb arylsulfatase B IDA RGD PMID:8037 RGD:1599235 NCBI chr 2:25,002,210...25,162,675
Ensembl chr 2:25,002,346...25,162,671
JBrowse link
G Atg10 autophagy related 10 involved_in ISO (PMID:15657430), (PMID:17256008) RGD PMID:15657430 PMID:17256008 NCBI chr 2:22,109,304...22,398,313
Ensembl chr 2:22,108,426...22,398,233
JBrowse link
G Atg12 autophagy related 12 IMP RGD PMID:18059433 RGD:2301217 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg14 autophagy related 14 involved_in ISO (MGI:4438180|PMID:19270696), (MGI:5619471|PMID:19270693) RGD PMID:19270693 PMID:19270696 MGI:4438180 MGI:5619471 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atg16l2 autophagy related 16-like 2 NOT|involved_in ISO (MGI:6436405|PMID:22082872) RGD PMID:22082872 MGI:6436405 NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
JBrowse link
G Atg3 autophagy related 3 IEP RGD PMID:17110912 RGD:1643237 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase involved_in ISO (PMID:18387192) RGD PMID:18387192 NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
JBrowse link
G Atg4c autophagy related 4C, cysteine peptidase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:113,867,218...113,935,534
Ensembl chr 5:113,867,092...113,934,830
JBrowse link
G Atg4d autophagy related 4D, cysteine peptidase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
JBrowse link
G Atg5 autophagy related 5 involved_in IMP
ISO
IEA
ISS
(MGI:2137756|PMID:11266458), (MGI:5509101|PMID:23878245)
GO_REF:0000043
(PMID:26812546)
GO_REF:0000024
RGD
UniProt
PMID:11266458 PMID:23878245 PMID:26812546 PMID:18059433 GO_REF:0000024 GO_REF:0000043 MGI:2137756 MGI:5509101, RGD:2301217 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:25327288)
(PMID:20543840), (PMID:24681637)
(MGI:4420830|PMID:20080761), (MGI:6208175|PMID:29937374)
MGI:2137515|MGI:2176052|MGI:2176073|MGI:3587769|MGI:3587771 (MGI:3587473|PMID:15866887), (MGI:3653078|PMID:16885219), (MGI:3711608|PMID:17450150), (MGI:3722981|PMID:17726112), (MGI:4829568|PMID:20577052)
UniProt
RGD
PMID:15866887 PMID:16885219 PMID:17450150 PMID:17726112 PMID:20080761 More... GO_REF:0000024 MGI:3587473 MGI:3653078 MGI:3711608 MGI:3722981 MGI:4420830 MGI:4829568 MGI:6208175 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within ISO MGI:4417824 (MGI:4414713|PMID:19926846) RGD PMID:19926846 MGI:4414713 NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:27278822)
(MGI:5881999|PMID:27278822)
RGD PMID:27278822 MGI:5881999 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Becn1 beclin 1 acts_upstream_of_or_within
involved_in
IMP
ISO
ISS
(PMID:28747345)
(PMID:23184933), (PMID:23629966), (PMID:24056303)
(MGI:5490676|PMID:23629966), (MGI:5619437|PMID:23364696)
(MGI:2385984|PMID:12372286), (MGI:3715542|PMID:17589504)
GO_REF:0000024
RGD
UniProt
PMID:12372286 PMID:17589504 PMID:23184933 PMID:23364696 PMID:23629966 More... GO_REF:0000024 MGI:2385984 MGI:3715542 MGI:5490676 MGI:5619437, RGD:1643194, RGD:11558011 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Becn2 beclin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:23954414)
MGI:5550535 (MGI:5528919|PMID:23954414)
RGD PMID:23954414 MGI:5528919 NCBI chr13:87,843,528...87,892,343
Ensembl chr13:87,844,531...87,845,787
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:24095276) RGD PMID:24095276 NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Cltc clathrin heavy chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Ctsb cathepsin B IEP RGD PMID:18567942 RGD:2315511 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
JBrowse link
G Dap death-associated protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752
JBrowse link
G Dram2 DNA-damage regulated autophagy modulator 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403
JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:26649942 RGD:13506953 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd3 dopamine receptor D3 IMP RGD PMID:26649942 RGD:13506953 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Ei24 EI24, autophagy associated transmembrane protein acts_upstream_of_or_within ISO MGI:2176173|MGI:5475023 (MGI:5468390|PMID:23074225) RGD PMID:23074225 MGI:5468390 NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571
JBrowse link
G Epg5 ectopic P-granules autophagy protein 5 homolog acts_upstream_of_or_within ISO MGI:5505596 (MGI:5488852|PMID:23479740) RGD PMID:23479740 MGI:5488852 NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:2182627 (MGI:5607479|PMID:24914213) RGD PMID:24914213 MGI:5607479 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Fnbp1l formin binding protein 1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:210,647,241...210,748,203
Ensembl chr 2:210,647,246...210,738,455
JBrowse link
G Foxo1 forkhead box O1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Gba glucosylceramidase beta involved_in
acts_upstream_of_or_within
ISO (PMID:27378698)
(MGI:5501380|PMID:23707074)
(MGI:5817293|PMID:27378698)
RGD PMID:23707074 PMID:27378698 MGI:5501380 MGI:5817293 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Gramd1a GRAM domain containing 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:86,367,001...86,393,348
Ensembl chr 1:86,367,001...86,393,336
JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Hmg1l1 high-mobility group (nonhistone chromosomal) protein 1-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:55,045,885...55,047,145
Ensembl chr19:55,045,869...55,047,145
JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:5,973,062...5,978,565 JBrowse link
G Hmgb1-ps3 high mobility group box 1, pseudogene 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:122,951,911...122,953,119 JBrowse link
G Itgb4 integrin subunit beta 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:24007983)
Ensembl
RGD
PMID:24007983 GO_REF:0000107 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in ISO (MGI:3038873|PMID:12221139) RGD PMID:12221139 MGI:3038873 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G LOC108349189 high mobility group protein B1 pseudogene involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:107,671,273...107,672,015
Ensembl chr  X:107,671,272...107,672,535
JBrowse link
G LOC108350839 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:91,306,902...91,309,095 JBrowse link
G LOC690000 similar to CG3740-PA involved_in ISO (PMID:26136767) RGD PMID:26136767 NCBI chr 1:90,873,542...90,887,205
Ensembl chr 1:90,873,549...90,886,208
JBrowse link
G LOC690117 similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:34,028,487...34,030,715 JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IDA RGD PMID:16420522 RGD:1643189 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISO
IEA
(PMID:23629966)
(MGI:5490676|PMID:23629966)
GO_REF:0000043
RGD
UniProt
PMID:23629966 GO_REF:0000043 MGI:5490676 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3808349 (MGI:5607479|PMID:24914213) RGD PMID:24914213 MGI:5607479 NCBI chr17:17,674,375...17,675,565
Ensembl chr17:17,674,319...17,677,148
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO UniProtKB:P10636 (PMID:19074461) RGD PMID:19074461 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Nrbf2 nuclear receptor binding factor 2 involved_in IEA
ISO
IBA
GO_REF:0000107
(MGI:5634877|PMID:24849286)
PMID:21873635
(PMID:24785657)
Ensembl
RGD
PMID:24785657 PMID:24849286 PMID:21873635 GO_REF:0000107 MGI:5634877, RGD:13792537 NCBI chr20:21,308,606...21,326,878
Ensembl chr20:21,308,576...21,326,818
JBrowse link
G Optn optineurin involved_in IEA GO_REF:0000104
GO_REF:0000043
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Phf23 PHD finger protein 23 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 acts_upstream_of_or_within ISO (PMID:25327288) RGD PMID:25327288 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217|MGI:2447704 (MGI:3575390|PMID:14627652), (MGI:3701167|PMID:17174099), (MGI:5605930|PMID:25014022) RGD PMID:14627652 PMID:17174099 PMID:25014022 MGI:3575390 MGI:3701167 MGI:5605930 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1930934 (MGI:3044229|PMID:15123735) RGD PMID:15123735 MGI:3044229 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO
ISS
(PMID:22939626)
GO_REF:0000024
RGD
UniProt
PMID:22939626 GO_REF:0000024 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:54,088,744...54,105,756
Ensembl chr 8:54,088,129...54,106,483
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 acts_upstream_of_or_within
involved_in
ISO MGI:2176173|MGI:3526069 (MGI:6323456|PMID:31006538)
(MGI:3796758|PMID:18443221)
RGD PMID:18443221 PMID:31006538 MGI:3796758 MGI:6323456 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Retreg1 reticulophagy regulator 1 acts_upstream_of_or_within ISO (MGI:6370289|PMID:31446166) RGD PMID:31446166 MGI:6370289 NCBI chr 2:76,335,609...76,474,817 JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 involved_in ISO
IEA
ISS
IBA
(PMID:24549040)
GO_REF:0000107
GO_REF:0000024
PMID:21873635
RGD
Ensembl
UniProt
PMID:24549040 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G RGD1563668 similar to High mobility group protein 1 (HMG-1) involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:39,768,658...39,769,408
Ensembl chr10:39,768,658...39,769,293
JBrowse link
G Rnf166 ring finger protein 166 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:50,529,434...50,539,274
Ensembl chr19:50,529,434...50,539,274
JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864
JBrowse link
G Rubcn rubicon autophagy regulator involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
JBrowse link
G S100a8 S100 calcium binding protein A8 involved_in ISS
ISO
GO_REF:0000024
(PMID:19935772)
UniProt
RGD
PMID:19935772 GO_REF:0000024 NCBI chr 2:176,166,517...176,167,645
Ensembl chr 2:176,167,124...176,167,643
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19935772)
Ensembl
UniProt
RGD
PMID:19935772 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230
JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273
JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:69,665,757...69,727,199
Ensembl chr13:69,684,291...69,727,196
JBrowse link
G Sirt2 sirtuin 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Sqstm1 sequestosome 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4819475|PMID:20421418), (MGI:5009358|PMID:20173742)
(PMID:17580304), (PMID:20452972)
UniProt
RGD
PMID:17580304 PMID:20173742 PMID:20421418 PMID:20452972 GO_REF:0000024 MGI:4819475 MGI:5009358 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Srpx sushi-repeat-containing protein, X-linked acts_upstream_of_or_within ISO MGI:3706175 (MGI:3852261|PMID:19368996) RGD PMID:19368996 MGI:3852261 NCBI chr  X:12,676,984...12,751,296 JBrowse link
G Stk11 serine/threonine kinase 11 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
JBrowse link
G Syt11 synaptotagmin 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:5881999|PMID:27278822)
(PMID:27278822)
UniProt
RGD
PMID:27278822 GO_REF:0000024 MGI:5881999 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Tbc1d5 TBC1 domain family, member 5 involved_in ISO (PMID:22354992) RGD PMID:22354992 NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (MGI:6296816|PMID:23908015) RGD PMID:23908015 MGI:6296816 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 involved_in ISO
ISS
(PMID:21575909)
GO_REF:0000024
RGD
UniProt
PMID:21575909 GO_REF:0000024 NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
JBrowse link
G Tgfbrap1 transforming growth factor, beta receptor associated protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:45,320,930...45,371,329
Ensembl chr 9:45,320,930...45,371,311
JBrowse link
G Tm9sf1 transmembrane 9 superfamily member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:29,127,585...29,135,349
Ensembl chr15:29,127,584...29,135,349
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:130,512,428...130,543,637
Ensembl chr 7:130,527,316...130,543,633
JBrowse link
G Tmem39a transmembrane protein 39a involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
JBrowse link
G Tollip toll interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:196,961,585...196,984,252
Ensembl chr 1:196,950,771...196,983,625
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:23629966) RGD PMID:23629966 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trappc4 trafficking protein particle complex subunit 4 involved_in ISO
IEA
ISS
(PMID:31794024)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:31794024 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:44,729,458...44,733,285
Ensembl chr 8:44,725,331...44,733,491
JBrowse link
G Trim17 tripartite motif-containing 17 involved_in ISO
IEA
(PMID:25127057)
GO_REF:0000107
RGD
Ensembl
PMID:25127057 GO_REF:0000107 NCBI chr10:43,743,111...43,750,929
Ensembl chr10:43,740,604...43,750,919
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:25127057) RGD PMID:25127057 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:17595159), (PMID:18936157)
(MGI:3796758|PMID:18443221), (MGI:5285135|PMID:21258367)
RGD PMID:17595159 PMID:18443221 PMID:18936157 PMID:21258367 MGI:3796758 MGI:5285135 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in ISO (PMID:18936157)
(MGI:3796758|PMID:18443221)
RGD PMID:18443221 PMID:18936157 MGI:3796758 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
G Umod uromodulin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6107740|PMID:28990932)
Ensembl
RGD
PMID:28990932 GO_REF:0000107 MGI:6107740 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302
JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897
JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:24056303) RGD PMID:24056303 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS
(PMID:20104022), (PMID:25125609)
GO_REF:0000024
RGD
UniProt
PMID:20104022 PMID:25125609 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISO
IBA
IDA
(PMID:28890335)
PMID:21873635
(MGI:3768504|PMID:17940279)
RGD PMID:17940279 PMID:28890335 PMID:21873635 PMID:17940279 MGI:3768504, RGD:13792537, RGD:8554414 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:44,683,768...44,698,572
Ensembl chr 8:44,684,127...44,698,568
JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A acts_upstream_of_or_within ISO (PMID:25996471) RGD PMID:25996471 NCBI chr 1:213,901,999...214,128,638
Ensembl chr 1:213,901,999...214,128,555
JBrowse link
G Vps39 VPS39 subunit of HOPS complex involved_in ISO
IBA
(PMID:24554770)
PMID:21873635
RGD PMID:24554770 PMID:21873635 RGD:13792537 NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in IEA
ISO
GO_REF:0000107
(PMID:20685960)
Ensembl
RGD
PMID:20685960 GO_REF:0000107 NCBI chr 1:203,360,434...203,370,295
Ensembl chr 1:203,360,440...203,370,430
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in IEA
ISO
GO_REF:0000107
(PMID:24095276)
Ensembl
RGD
PMID:24095276 GO_REF:0000107 NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISS
ISO
GO_REF:0000024
(PMID:23435086)
UniProt
RGD
PMID:23435086 GO_REF:0000024 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:15602573), (PMID:17618624) RGD PMID:15602573 PMID:17618624 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07048308.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07072668.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:55,052,756...55,053,109 JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO UniProtKB:O60260|UniProtKB:Q99MQ3 (PMID:25215947) RGD PMID:25215947 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atg12 autophagy related 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg2a autophagy related 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
JBrowse link
G Atg2b autophagy related 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
JBrowse link
G Atg3 autophagy related 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg5 autophagy related 5 involved_in IEA
ISO
IBA
GO_REF:0000107
(MGI:3796473|PMID:18281291)
PMID:21873635
Ensembl
RGD
PMID:18281291 PMID:21873635 GO_REF:0000107 MGI:3796473, RGD:13792537 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
ISO
IBA
UniProtKB:Q9BXM7 (PMID:19279012)
(MGI:4420830|PMID:20080761)
(MGI:5529208|PMID:23981124)
PMID:21873635
RGD PMID:19279012 PMID:20080761 PMID:23981124 PMID:21873635 MGI:4420830 MGI:5529208, RGD:13792537 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atg9a autophagy related 9A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atg9b autophagy related 9B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:25215947)
(MGI:3796473|PMID:18281291)
RGD PMID:18281291 PMID:25215947 MGI:3796473 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Capn10 calpain 10 IMP RGD PMID:22568896 RGD:7247732 NCBI chr 9:93,498,132...93,510,494
Ensembl chr 9:93,498,478...93,510,494
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:25217637) RGD PMID:25217637 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 involved_in IBA
ISO
PMID:21873635
(MGI:3845412|PMID:19451219)
RGD PMID:19451219 PMID:21873635 MGI:3845412, RGD:13792537 NCBI chr 2:223,828,937...223,853,768
Ensembl chr 2:223,828,937...223,868,946
JBrowse link
G Ctsk cathepsin K involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 2:183,058,586...183,069,551
Ensembl chr 2:183,058,569...183,069,550
JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO
ISS
(PMID:23933751)
GO_REF:0000024
RGD
UniProt
PMID:23933751 GO_REF:0000024 NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
JBrowse link
G Fis1 fission, mitochondrial 1 involved_in ISO
IBA
(PMID:18515060)
PMID:21873635
RGD PMID:18515060 PMID:21873635 RGD:13792537 NCBI chr12:19,708,558...19,723,392
Ensembl chr12:19,708,558...19,723,377
JBrowse link
G Fundc1 FUN14 domain containing 1 involved_in
acts_upstream_of_or_within
ISO
IBA
ISS
(PMID:22267086)
UniProtKB:Q9H492 (PMID:22267086)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22267086 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:5,083,635...5,100,293
Ensembl chr  X:5,083,617...5,100,284
JBrowse link
G Fundc2 FUN14 domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:128,473...138,232
Ensembl chr18:132,248...138,345
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G LOC100359937 GABA(A) receptor-associated protein-like 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:89,246,175...89,247,132 JBrowse link
G LOC365778 similar to RIKEN cDNA 1700034I23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:123,877,836...123,880,083
Ensembl chr 2:123,877,709...123,880,126
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:Q8IVP5 (PMID:22267086)
RGD PMID:22267086 PMID:21873635 RGD:13792537 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISO
IBA
UniProtKB:Q9BXM7 (PMID:19279012)
PMID:21873635
RGD PMID:19279012 PMID:21873635 RGD:13792537 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO
IBA
(PMID:20798600), (PMID:23933751), (PMID:24896179)
PMID:21873635
RGD PMID:20798600 PMID:23933751 PMID:24896179 PMID:21873635 RGD:13792537 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19783904 RGD:10059673 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IBA
ISS
ISO
IDA
PMID:21873635
GO_REF:0000024
(PMID:19029340), (PMID:23933751), (PMID:24896179), (PMID:25621951)
PMID:20457763
ParkinsonsUK-UCL
RGD
UniProt
PMID:19029340 PMID:23933751 PMID:24896179 PMID:25621951 PMID:21873635 More... GO_REF:0000024, RGD:13792537, RGD:10047224 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6358090 (MGI:5921109|PMID:28934388) RGD PMID:28934388 MGI:5921109 NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
G Usp30 ubiquitin specific peptidase 30 involved_in ISO (PMID:24896179), (PMID:25621951) RGD PMID:24896179 PMID:25621951 NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616
JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
autophagy of nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg3 autophagy related 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg5 autophagy related 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
autophagy of peroxisome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028887.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Acbd5 acyl-CoA binding domain containing 5 involved_in IEA
ISO
GO_REF:0000002
(PMID:24535825)
InterPro
RGD
PMID:24535825 GO_REF:0000002 NCBI chr17:85,206,178...85,248,909
Ensembl chr17:85,206,303...85,248,215
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Trappc8 trafficking protein particle complex subunit 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:12,103,874...12,180,422
Ensembl chr18:12,103,877...12,180,107
JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bag3 BAG cochaperone 3 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in NAS PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in NAS PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within
IDA
IGI
PMID:18644871 ParkinsonsUK-UCL
MGI
PMID:18644871 PMID:18644871 RGD:10412301, RGD:10412301 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:11082038
UniProtKB:P13473 (MGI:3813410|PMID:18644871), (MGI:5805578|PMID:27628032)
(MGI:3813419|PMID:18579532)
(PMID:24880125), (PMID:27628032)
(PMID:8662539)
RGD PMID:8662539 PMID:18579532 PMID:18644871 PMID:24880125 PMID:27628032 More... MGI:3813410 MGI:3813419 MGI:5805578, RGD:1581607 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046
JBrowse link
G Synpo2 synaptopodin 2 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 2:211,217,099...211,371,267
Ensembl chr 2:211,216,783...211,371,267
JBrowse link
engulfment of target by autophagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22020285) RGD PMID:22020285 NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443
JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5544501|PMID:24310610) RGD PMID:24310610 MGI:5544501 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:32276428) RGD PMID:32276428 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
late endosomal microautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07011951.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07033324.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:17,466,782...17,468,721 JBrowse link
G AABR07048992.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Hsc70-ps1 heat shock cognate protein 70, pseudogene 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:164,044,226...164,046,344 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IBA
ISO
PMID:21873635
(MGI:5700294|PMID:21238931)
RGD PMID:21238931 PMID:21873635 MGI:5700294, RGD:13792537 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G LOC100363133 heat shock cognate 71 kDa protein-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:155,934,803...155,936,915 JBrowse link
G LOC680121 similar to heat shock protein 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA
ISO
GO_REF:0000107
(MGI:5700294|PMID:21238931)
Ensembl
RGD
PMID:21238931 GO_REF:0000107 MGI:5700294 NCBI chr19:34,934,999...34,948,267
Ensembl chr19:34,934,961...34,948,887
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (MGI:5700294|PMID:21238931) RGD PMID:21238931 MGI:5700294 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229
JBrowse link
late nucleophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg2a autophagy related 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
JBrowse link
G Atg2b autophagy related 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
JBrowse link
G Atg7 autophagy related 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atg9a autophagy related 9A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atg9b autophagy related 9B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in ISO (PMID:29902443) RGD PMID:29902443 NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(MGI:5689086|PMID:23708524)
GO_Central
RGD
PMID:23708524 GO_REF:0000024 MGI:5689086 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07048308.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07072668.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:55,052,756...55,053,109 JBrowse link
G Acbd5 acyl-CoA binding domain containing 5 NOT|involved_in ISO (PMID:24535825) RGD PMID:24535825 NCBI chr17:85,206,178...85,248,909
Ensembl chr17:85,206,303...85,248,215
JBrowse link
G Atg10 autophagy related 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:22,109,304...22,398,313
Ensembl chr 2:22,108,426...22,398,233
JBrowse link
G Atg14 autophagy related 14 involved_in ISO (PMID:23878393) RGD PMID:23878393 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atg3 autophagy related 3 acts_upstream_of_or_within ISO (MGI:5562485|PMID:24035364) RGD PMID:24035364 MGI:5562485 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO MGI:3612279 (MGI:4457987|PMID:20453062), (MGI:5494529|PMID:22496425), (MGI:5500861|PMID:23704209), (MGI:5562485|PMID:24035364) RGD PMID:20453062 PMID:22496425 PMID:23704209 PMID:24035364 MGI:4457987 MGI:5494529 MGI:5500861 MGI:5562485 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
ISO (PMID:22354037)
MGI:1934631|MGI:3587769 (MGI:5494529|PMID:22496425), (MGI:5500861|PMID:23704209), (MGI:5562485|PMID:24035364)
RGD PMID:22354037 PMID:22496425 PMID:23704209 PMID:24035364 MGI:5494529 MGI:5500861 MGI:5562485 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Becn1 beclin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:5619439|PMID:23332761)
MGI:1097712|MGI:2683833 (MGI:2682527|PMID:14657337), (MGI:3723543|PMID:17468177)
UniProt
RGD
PMID:14657337 PMID:17468177 PMID:23332761 GO_REF:0000024 MGI:2682527 MGI:3723543 MGI:5619439 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin acts_upstream_of_or_within ISO MGI:2388888 (MGI:3690270|PMID:16714284) RGD PMID:16714284 MGI:3690270 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Ei24 EI24, autophagy associated transmembrane protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G Hdac10 histone deacetylase 10 involved_in ISO
ISS
(PMID:23801752)
GO_REF:0000024
RGD
UniProt
PMID:23801752 GO_REF:0000024 NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228
JBrowse link
G Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,809,931...5,876,231
Ensembl chr20:5,809,936...5,876,012
JBrowse link
G LOC100359937 GABA(A) receptor-associated protein-like 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:89,246,175...89,247,132 JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in IBA
ISO
PMID:21873635
(PMID:28223137)
RGD PMID:28223137 PMID:21873635 RGD:13792537 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in IBA
ISO
PMID:21873635
(PMID:28223137)
RGD PMID:28223137 PMID:21873635 RGD:13792537 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
JBrowse link
G Myo5a myosin VA IMP RGD PMID:29217155 RGD:42721980 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
JBrowse link
G Nbr1 NBR1, autophagy cargo receptor involved_in IBA
IEA
ISS
ISO
PMID:21873635
GO_REF:0000107
GO_REF:0000002
GO_REF:0000024
(PMID:19250911)
Ensembl
InterPro
UniProt
RGD
PMID:19250911 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr10:86,477,775...86,506,418
Ensembl chr10:86,478,290...86,506,412
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha acts_upstream_of_or_within ISO MGI:2685054 (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta acts_upstream_of_or_within ISO MGI:1203729 (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5619439|PMID:23332761), (MGI:5630037|PMID:25578879)
UniProt
RGD
PMID:23332761 PMID:25578879 GO_REF:0000024 MGI:5619439 MGI:5630037 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Plaa phospholipase A2, activating protein involved_in ISS
ISO
GO_REF:0000024
(PMID:27753622)
UniProt
RGD
PMID:27753622 GO_REF:0000024 NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO
ISS
(PMID:20168092)
GO_REF:0000024
RGD
UniProt
PMID:20168092 GO_REF:0000024 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Tbc1d5 TBC1 domain family, member 5 involved_in ISO (PMID:24603492) RGD PMID:24603492 NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (MGI:5500861|PMID:23704209) RGD PMID:23704209 MGI:5500861 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tmem74 transmembrane protein 74 involved_in ISO (PMID:18294959) RGD PMID:18294959 NCBI chr 7:74,929,286...74,937,973 JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 acts_upstream_of_or_within ISO MGI:1931135|MGI:5637673 (MGI:5582129|PMID:24713655) RGD PMID:24713655 MGI:5582129 NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO (PMID:20529957) RGD PMID:20529957 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ubxn6 UBX domain protein 6 involved_in ISO (PMID:27753622) RGD PMID:27753622 NCBI chr 9:900,883...906,047
Ensembl chr 9:900,884...906,124
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:22354037)
UniProtKB:O70405 (MGI:5607224|PMID:21855797)
(MGI:5285135|PMID:21258367)
RGD PMID:21258367 PMID:21855797 PMID:22354037 MGI:5285135 MGI:5607224 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO
GO_REF:0000024
(PMID:27753622)
UniProt
RGD
PMID:27753622 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Vps41 VPS41 subunit of HOPS complex involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:46,063,124...46,227,582
Ensembl chr17:46,063,124...46,227,791
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISS
ISO
GO_REF:0000024
(PMID:27753622)
UniProt
RGD
PMID:27753622 GO_REF:0000024 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205
JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 involved_in ISO (PMID:25578879) RGD PMID:25578879 NCBI chr 6:103,184,938...103,234,111
Ensembl chr 6:103,184,938...103,234,039
JBrowse link
mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:21753002), (PMID:25215947) RGD PMID:21753002 PMID:25215947 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atg13 autophagy related 13 involved_in IBA
ISO
PMID:21873635
(MGI:5607224|PMID:21855797)
RGD PMID:21855797 PMID:21873635 MGI:5607224, RGD:13792537 NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
JBrowse link
G Atg14 autophagy related 14 involved_in ISO
IBA
(PMID:23878393)
PMID:21873635
RGD PMID:23878393 PMID:21873635 RGD:13792537 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:23878393) RGD PMID:23878393 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Gba glucosylceramidase beta acts_upstream_of_or_within ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISS
ISO
GO_REF:0000024
(PMID:28017329)
UniProt
RGD
PMID:28017329 GO_REF:0000024 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Phb2 prohibitin 2 involved_in ISO
ISS
(PMID:28017329)
(MGI:6436385|PMID:28017329)
GO_REF:0000024
RGD
UniProt
PMID:28017329 GO_REF:0000024 MGI:6436385 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
ISO (PMID:28017329)
MGI:1921624 (MGI:5603233|PMID:24949970)
RGD PMID:24949970 PMID:28017329 MGI:5603233 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Retreg1 reticulophagy regulator 1 acts_upstream_of_or_within ISO (MGI:6370289|PMID:31446166) RGD PMID:31446166 MGI:6370289 NCBI chr 2:76,335,609...76,474,817 JBrowse link
G Sqstm1 sequestosome 1 involved_in IBA
ISO
PMID:21873635
UniProtKB:Q9JK66 (PMID:20457763)
RGD PMID:20457763 PMID:21873635 RGD:13792537 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:33096711)
(MGI:6450300|PMID:25919711)
RGD PMID:25919711 PMID:33096711 MGI:6450300 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5607224|PMID:21855797) RGD PMID:21855797 MGI:5607224 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
mitophagy by induced vacuole formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata18 spermatogenesis associated 18 involved_in IBA
ISS
IEA
ISO
PMID:21873635
GO_REF:0000024
GO_REF:0000107
(PMID:21264228)
UniProt
Ensembl
RGD
PMID:21264228 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr14:34,531,931...34,558,671
Ensembl chr14:34,531,061...34,558,687
JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 acts_upstream_of_or_within ISO MGI:2683833 (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:21975012) RGD PMID:21975012 NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (MGI:5543871|PMID:23918802) RGD PMID:23918802 MGI:5543871 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 involved_in ISO
ISS
(PMID:25495476)
GO_REF:0000024
RGD
GO_Central
PMID:25495476 GO_REF:0000024 NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683
JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25495476)
GO_Central
Ensembl
RGD
PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:16,654,572...16,694,628
Ensembl chr 6:16,654,614...16,694,626
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in IBA
ISO
PMID:21873635
(PMID:23916833)
RGD PMID:23916833 PMID:21873635 RGD:13792537 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mtm1 myotubularin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2450997 (MGI:5510937|PMID:23695157)
RGD PMID:23695157 PMID:21873635 MGI:5510937, RGD:13792537 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
GO_REF:0000024
(PMID:20181828)
UniProt
RGD
PMID:20181828 GO_REF:0000024 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
IBA
ISS
(PMID:25484098)
PMID:21873635
GO_REF:0000024
RGD
GO_Central
PMID:25484098 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Scfd1 sec1 family domain containing 1 involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Tmem39a transmembrane protein 39a involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:31806350)
UniProt
RGD
PMID:31806350 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
ISS
IBA
(PMID:25484098)
GO_REF:0000024
PMID:21873635
RGD
GO_Central
PMID:25484098 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782
JBrowse link
G Rubcn rubicon autophagy regulator involved_in IBA
ISO
PMID:21873635
(PMID:21062745)
RGD PMID:21062745 PMID:21873635 RGD:13792537 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS
(PMID:31806350)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:31806350 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:23459205) RGD PMID:23459205 NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059
JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:18387192) RGD PMID:18387192 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in IEA
ISO
GO_REF:0000107
(MGI:3796473|PMID:18281291)
Ensembl
RGD
PMID:18281291 GO_REF:0000107 MGI:3796473 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Becn1 beclin 1 acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO
IBA
(PMID:23629966)
(MGI:5490676|PMID:23629966)
PMID:21873635
RGD PMID:23629966 PMID:21873635 MGI:5490676, RGD:13792537 NCBI chr 3:105,499,534...105,520,159
Ensembl chr 3:105,499,538...105,520,145
JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in ISS
ISO
GO_REF:0000024
(PMID:29164996)
UniProt
RGD
PMID:29164996 GO_REF:0000024 NCBI chr 5:166,474,947...166,479,103
Ensembl chr 5:166,474,966...166,479,017
JBrowse link
G Dap death-associated protein involved_in IBA
ISO
PMID:21873635
(PMID:20537536)
RGD PMID:20537536 PMID:21873635 RGD:13792537 NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752
JBrowse link
G Dapl1 death associated protein-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:43,960,993...43,980,940
Ensembl chr 3:43,960,810...43,980,940
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 5:150,197,410...150,418,363
Ensembl chr 5:150,195,226...150,418,363
JBrowse link
G Foxk1 forkhead box K1 involved_in ISO (PMID:25402684) RGD PMID:25402684 NCBI chr12:12,110,119...12,175,089
Ensembl chr12:12,115,950...12,175,089
JBrowse link
G Foxk2 forkhead box K2 involved_in ISO (MGI:5615527|PMID:25402684) RGD PMID:25402684 MGI:5615527 NCBI chr10:106,542,643...106,592,569
Ensembl chr10:106,542,566...106,592,563
JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:19901028 RGD:5131537 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Golga2 golgin A2 involved_in ISO (PMID:22735382) RGD PMID:22735382 NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (MGI:4461108|PMID:20041218) RGD PMID:20041218 MGI:4461108 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20099302)
UniProt
Ensembl
RGD
PMID:20099302 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:86,735,793...86,756,640
Ensembl chr 9:86,742,102...86,755,108
JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il10ra interleukin 10 receptor subunit alpha involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061
JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO (MGI:3575206|PMID:15680329) RGD PMID:15680329 MGI:3575206 NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066
JBrowse link
G Kdm4a lysine demethylase 4A involved_in ISO (PMID:25660547) RGD PMID:25660547 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Klhl22 kelch-like family member 22 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:29769719)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:29769719 GO_REF:0000024 GO_REF:0000107 NCBI chr11:83,190,891...83,231,746
Ensembl chr11:83,190,891...83,231,770
JBrowse link
G Lep leptin involved_in ISO
ISS
(PMID:25060689)
(MGI:5705211|PMID:25060689)
GO_REF:0000024
RGD
UniProt
PMID:25060689 GO_REF:0000024 MGI:5705211 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lepr leptin receptor involved_in ISO
IEA
ISS
(PMID:25060689)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25060689 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member involved_in ISO (PMID:24113155) RGD PMID:24113155 NCBI chr 2:183,219,137...183,235,676
Ensembl chr 2:183,219,220...183,222,303
JBrowse link
G Mir223 microRNA 223 IDA RGD PMID:29608885 RGD:21408565 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mt3 metallothionein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4881636|PMID:20544854)
UniProt
RGD
PMID:20544854 GO_REF:0000024 MGI:4881636 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mtmr9 myotubularin related protein 9 involved_in IBA
ISO
PMID:21873635
UniProtKB:Q96EF0-1 (PMID:22647598)
RGD PMID:22647598 PMID:21873635 RGD:13792537 NCBI chr15:37,769,161...37,791,195
Ensembl chr15:37,769,078...37,791,244
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IMP
ISO
ISS
(MGI:5285135|PMID:21258367)
GO_REF:0000024
(PMID:22424946), (PMID:22576015), (PMID:30704899)
RGD
UniProt
PMID:21258367 PMID:22424946 PMID:22576015 PMID:30704899 PMID:24725502 GO_REF:0000024 MGI:5285135, RGD:10040964 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IMP RGD PMID:26601421 RGD:13781888 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
IMP
GO_REF:0000024
(MGI:6283395|PMID:20181828)
(PMID:20181828)
UniProt
RGD
PMID:20181828 PMID:20181828 GO_REF:0000024 MGI:6283395, RGD:14390062 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Rasip1 Ras interacting protein 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 1:96,097,078...96,109,564
Ensembl chr 1:96,091,074...96,109,562
JBrowse link
G Rnf5 ring finger protein 5 acts_upstream_of_or_within ISO MGI:3775796 (MGI:5469257|PMID:23093945) RGD PMID:23093945 MGI:5469257 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985
JBrowse link
G Rraga Ras-related GTP binding A involved_in ISO
ISS
(PMID:25936802)
GO_REF:0000024
RGD
UniProt
PMID:25936802 GO_REF:0000024 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510
JBrowse link
G Rubcn rubicon autophagy regulator involved_in ISO (PMID:19270696) RGD PMID:19270696 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:20543840)
UniProt
RGD
PMID:20543840 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Tbc1d14 TBC1 domain family, member 14 involved_in IEA
ISO
GO_REF:0000107
(PMID:22613832)
Ensembl
RGD
PMID:22613832 GO_REF:0000107 NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5906931|PMID:28802038) RGD PMID:28802038 MGI:5906931 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
G Washc1 WASH complex subunit 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5519172|PMID:23974797)
Ensembl
RGD
PMID:23974797 GO_REF:0000107 MGI:5519172 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Wdr6 WD repeat domain 6 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 8:109,268,079...109,274,504
Ensembl chr 8:109,268,079...109,274,499
JBrowse link
G Zkscan3 zinc finger with KRAB and SCAN domains 3 involved_in ISO (PMID:23434374) RGD PMID:23434374 NCBI chr17:43,217,168...43,232,828
Ensembl chr17:43,217,222...43,232,827
JBrowse link
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Tspo translocator protein involved_in ISO (PMID:25470454)
(MGI:5689082|PMID:25470454)
RGD PMID:25470454 MGI:5689082 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in ISO
ISS
NAS
UniProtKB:P10619 (PMID:12505983)
(MGI:5700310|PMID:12505983)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:12505983 PMID:12505983 GO_REF:0000024 MGI:5700310, RGD:10412300 NCBI chr 3:153,569,106...153,574,983
Ensembl chr 3:153,568,381...153,576,215
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:20697033) RGD PMID:20697033 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO MGI:2429784 (MGI:5430482|PMID:20705711) RGD PMID:20705711 MGI:5430482 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:25327288)
(MGI:3690270|PMID:16714284), (MGI:5563734|PMID:23274896)
RGD PMID:16714284 PMID:23274896 PMID:25327288 PMID:21873635 MGI:3690270 MGI:5563734, RGD:13792537 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO MGI:1857409|MGI:1891828 (MGI:3723543|PMID:17468177) RGD PMID:17468177 MGI:3723543 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Nrbp2 nuclear receptor binding protein 2 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 7:107,798,642...107,805,230
Ensembl chr 7:107,799,497...107,805,230
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 acts_upstream_of_or_within ISO MGI:4044390 (MGI:5588624|PMID:24797518) RGD PMID:24797518 MGI:5588624 NCBI chr10:63,408,766...63,417,605
Ensembl chr10:63,407,213...63,417,605
JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:24475161) RGD PMID:24475161 NCBI chr13:67,949,780...67,987,434
Ensembl chr13:67,949,780...67,987,459
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Tsc2 TSC complex subunit 2 IMP RGD PMID:24599401 RGD:11568679 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:22622177) RGD PMID:22622177 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
JBrowse link
negative regulation of macroautophagy by TORC1 signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO MGI:1921624 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:5319187 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1857263 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Usp30 ubiquitin specific peptidase 30 IMP RGD PMID:24896179 RGD:13208875 NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616
JBrowse link
negative regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 involved_in ISO (MGI:5581539|PMID:24709290) RGD PMID:24709290 MGI:5581539 NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095
JBrowse link
negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps13c vacuolar protein sorting 13 homolog C involved_in ISO
ISS
(PMID:26942284)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:26942284 GO_REF:0000024 NCBI chr 8:68,478,366...68,651,893
Ensembl chr 8:68,478,395...68,651,895
JBrowse link
parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 involved_in ISO UniProtKB:Q9JK66|UniProtKB:Q9Z2V5 (PMID:20457763) RGD PMID:20457763 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Mfn2 mitofusin 2 involved_in ISO (MGI:5498413|PMID:23620051) RGD PMID:23620051 MGI:5498413 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Optn optineurin involved_in ISO
IEA
(PMID:25294927)
GO_REF:0000107
RGD
Ensembl
PMID:25294927 GO_REF:0000107 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19029340) RGD PMID:19029340 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (MGI:5298125|PMID:22020285) RGD PMID:22020285 MGI:5298125 NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
JBrowse link
pexophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pjvk pejvakin involved_in ISO (MGI:6294584|PMID:30936319) RGD PMID:30936319 MGI:6294584 NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
JBrowse link
piecemeal microautophagy of the nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg13 autophagy related 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
JBrowse link
G Atg2a autophagy related 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
JBrowse link
G Atg2b autophagy related 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
JBrowse link
G Atg7 autophagy related 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
positive regulation by symbiont of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in ISO
IEA
UniProtKB:O95352 (PMID:28389568)
GO_REF:0000107
RGD
Ensembl
PMID:28389568 GO_REF:0000107 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in ISO UniProtKB:Q9H1Y0 (PMID:28389568) RGD PMID:28389568 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:16888103), (PMID:28389568)
(MGI:3656111|PMID:16888103)
RGD PMID:16888103 PMID:28389568 MGI:3656111 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO UniProtKB:Q8IYT8 (PMID:28389568) RGD PMID:28389568 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in ISO UniProtKB:O75385 (PMID:28389568) RGD PMID:28389568 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 involved_in ISO (PMID:18006506) RGD PMID:18006506 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Hspb8 heat shock protein family B (small) member 8 involved_in ISO (PMID:18006506) RGD PMID:18006506 NCBI chr12:40,176,405...40,205,002
Ensembl chr12:40,176,532...40,191,185
JBrowse link
G Htt huntingtin involved_in IEA
ISO
GO_REF:0000107
(PMID:25686248)
Ensembl
RGD
PMID:25686248 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 IMP RGD PMID:25561470 RGD:11561937 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO
IEA
(PMID:21072319)
GO_REF:0000107
RGD
Ensembl
PMID:21072319 GO_REF:0000107 NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:25484098) RGD PMID:25484098 NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154
JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO (PMID:25578879) RGD PMID:25578879 NCBI chr17:81,496,669...81,668,180 JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO (PMID:25578879) RGD PMID:25578879 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO
IEA
(PMID:25578879)
GO_REF:0000107
RGD
Ensembl
PMID:25578879 GO_REF:0000107 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
IEA
ISS
(PMID:25495476)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
GO_Central
PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25495476)
GO_Central
Ensembl
RGD
PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr13:96,757,430...96,828,930
Ensembl chr13:96,757,460...96,829,478
JBrowse link
G Ralb RAS like proto-oncogene B involved_in ISO
IEA
(PMID:24056301)
GO_REF:0000107
RGD
Ensembl
PMID:24056301 GO_REF:0000107 NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO
IEA
(PMID:21068542)
GO_REF:0000107
(MGI:5634888|PMID:21068542)
RGD
Ensembl
PMID:21068542 GO_REF:0000107 MGI:5634888 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 IMP RGD PMID:23448468 RGD:13208863 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025818.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:48,598,506...48,599,444 JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:23708524)
Ensembl
GO_Central
RGD
PMID:23708524 GO_REF:0000024 GO_REF:0000107 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in ISO (PMID:25771791) RGD PMID:25771791 NCBI chr10:81,055,467...81,069,298 JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in ISO
IBA
(PMID:26468287)
PMID:21873635
RGD PMID:26468287 PMID:21873635 RGD:13792537 NCBI chr 8:123,412,105...123,479,315
Ensembl chr 8:123,412,112...123,479,021
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:16888103)
(MGI:3656111|PMID:16888103)
RGD PMID:16888103 MGI:3656111 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
positive regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor IMP RGD PMID:22293957 RGD:7245565 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 IMP RGD PMID:25117440 RGD:11552604 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atf6 activating transcription factor 6 acts_upstream_of_or_within ISO (PMID:28747345) RGD PMID:28747345 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
JBrowse link
G Atg16l1 autophagy related 16-like 1 involved_in ISO (MGI:6271293|PMID:30208760) RGD PMID:30208760 MGI:6271293 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
JBrowse link
G Atg7 autophagy related 7 IDA
IMP
RGD PMID:24674959 PMID:25639566 RGD:11553823, RGD:11553824 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Becn1 beclin 1 IMP RGD PMID:24674959 RGD:11553823 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:22095288) RGD PMID:22095288 NCBI chr17:3,930,223...4,090,991
Ensembl chr17:3,930,213...4,090,991
JBrowse link
G Dcn decorin involved_in ISO (PMID:23798385) RGD PMID:23798385 NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
JBrowse link
G Dhrsx dehydrogenase/reductase X-linked involved_in IBA
ISO
PMID:21873635
(PMID:25076851)
RGD PMID:25076851 PMID:21873635 RGD:13792537 NCBI chr12:16,299,768...16,304,553
Ensembl chr12:16,299,808...16,304,552
JBrowse link
G Flcn folliculin involved_in ISO
ISS
(PMID:25126726)
GO_REF:0000024
RGD
UniProt
PMID:25126726 GO_REF:0000024 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Foxo1 forkhead box O1 involved_in ISO
ISS
(PMID:20543840)
GO_REF:0000024
RGD
UniProt
PMID:20543840 GO_REF:0000024 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (MGI:3771642|PMID:18054316), (MGI:3771681|PMID:18054315) RGD PMID:18054315 PMID:18054316 MGI:3771642 MGI:3771681 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:5319706|PMID:22539723)
UniProt
RGD
PMID:22539723 GO_REF:0000024 MGI:5319706 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO
GO_REF:0000024
RNAcentral:URS0000554A4F_10090 (MGI:5319706|PMID:22539723), (MGI:5825416|PMID:26160071)
UniProt
RGD
PMID:22539723 PMID:26160071 GO_REF:0000024 MGI:5319706 MGI:5825416 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO (MGI:3796473|PMID:18281291) RGD PMID:18281291 MGI:3796473 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hmgb1 high mobility group box 1 involved_in IMP
ISO
(MGI:5634889|PMID:20819940)
(PMID:20819940)
RGD PMID:20819940 PMID:23604926 MGI:5634889, RGD:10402086 NCBI chr12:5,973,062...5,978,565 JBrowse link
G Ifng interferon gamma involved_in ISO
ISS
(PMID:23629966), (PMID:26347139)
GO_REF:0000024
RGD
UniProt
PMID:23629966 PMID:26347139 GO_REF:0000024 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5319706|PMID:22539723)
GO_REF:0000107
(PMID:30704899)
UniProt
RGD
Ensembl
PMID:22539723 PMID:30704899 GO_REF:0000024 GO_REF:0000107 MGI:5319706 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO
IBA
(PMID:22012985)
(MGI:4454597|PMID:20457918)
PMID:21873635
RGD PMID:20457918 PMID:22012985 PMID:21873635 MGI:4454597, RGD:13792537 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA RGD PMID:26581593 RGD:12879823 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Mefv MEFV innate immuity regulator, pyrin involved_in ISS
ISO
GO_REF:0000024
(PMID:26347139)
UniProt
RGD
PMID:26347139 GO_REF:0000024 NCBI chr10:11,786,948...11,796,977
Ensembl chr10:11,787,422...11,796,973
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:26347139) RGD PMID:26347139 NCBI chr  X:104,354,692...104,456,757
Ensembl chr  X:104,355,316...104,453,473
JBrowse link
G Mtdh metadherin involved_in ISO (PMID:21127263) RGD PMID:21127263 NCBI chr 7:65,306,464...65,365,647
Ensembl chr 7:65,306,400...65,364,413
JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:108,215,823...108,218,996
Ensembl chr 8:108,215,814...108,218,996
JBrowse link
G Optn optineurin involved_in ISO (PMID:21617041) RGD PMID:21617041 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28747345)
MGI:6369059 (MGI:6099440|PMID:28747345)
Ensembl
RGD
PMID:28747345 GO_REF:0000107 MGI:6099440 NCBI chr10:83,590,052...83,598,620
Ensembl chr10:83,590,071...83,598,620
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha involved_in ISO (PMID:28910396) RGD PMID:28910396 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase involved_in ISO (MGI:4361989|PMID:17476689) RGD PMID:17476689 MGI:4361989 NCBI chr  X:14,617,582...14,622,851
Ensembl chr  X:14,617,582...14,622,851
JBrowse link
G Plekhf1 pleckstrin homology and FYVE domain containing 1 involved_in ISO (PMID:22115783) RGD PMID:22115783 NCBI chr 1:90,908,304...90,915,862
Ensembl chr 1:90,904,742...90,915,820
JBrowse link
G Plk2 polo-like kinase 2 involved_in ISO (PMID:23983262) RGD PMID:23983262 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO
ISS
(PMID:22012985), (PMID:26103054)
(MGI:5285135|PMID:21258367)
GO_REF:0000024
RGD
UniProt
PMID:21258367 PMID:22012985 PMID:26103054 GO_REF:0000024 MGI:5285135 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5285135|PMID:21258367)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21258367 GO_REF:0000024 GO_REF:0000107 MGI:5285135 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkd1 protein kinase D1 involved_in ISO (PMID:22095288) RGD PMID:22095288 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Rnf152 ring finger protein 152 involved_in ISO
IBA
ISS
(PMID:25936802)
(MGI:5644195|PMID:25936802)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25936802 PMID:21873635 GO_REF:0000024 MGI:5644195, RGD:13792537 NCBI chr13:21,324,039...21,403,405
Ensembl chr13:21,323,824...21,403,113
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in ISO
IEA
UniProtKB:Q14457 (PMID:27853422)
GO_REF:0000107
RGD
Ensembl
PMID:27853422 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Sh3bp4 SH3-domain binding protein 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22575674)
UniProt
Ensembl
RGD
PMID:22575674 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:89,660,156...89,739,163
Ensembl chr 9:89,660,156...89,739,163
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO (PMID:17891140)
(MGI:3770552|PMID:17891140)
RGD PMID:17891140 MGI:3770552 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:23878245) RGD PMID:23878245 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
JBrowse link
G Svip small VCP interacting protein involved_in ISO
IBA
(PMID:21909394)
PMID:21873635
RGD PMID:21909394 PMID:21873635 RGD:13792537 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:21617040), (PMID:22576015), (PMID:23434374) RGD PMID:21617040 PMID:22576015 PMID:23434374 NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) RGD PMID:17658277 MGI:3718934 NCBI chr 9:1,102,559...1,115,573 JBrowse link
G Tlr9 toll-like receptor 9 IDA RGD PMID:18632594 RGD:2301341 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Tmem59 transmembrane protein 59 involved_in ISO
IBA
(PMID:23376921)
PMID:21873635
RGD PMID:23376921 PMID:21873635 RGD:13792537 NCBI chr 5:121,962,507...121,983,625
Ensembl chr 5:121,962,440...121,983,625
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22421968), (PMID:22470510)
Ensembl
UniProt
RGD
PMID:22421968 PMID:22470510 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
JBrowse link
G Tpcn1 two pore segment channel 1 involved_in ISO
IEA
(PMID:22012985)
GO_REF:0000107
RGD
Ensembl
PMID:22012985 GO_REF:0000107 NCBI chr12:35,972,813...36,029,632
Ensembl chr12:35,972,846...36,029,626
JBrowse link
G Trim14 tripartite motif-containing 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:60,800,032...60,825,481
Ensembl chr 5:60,800,032...60,824,858
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IBA
ISO
PMID:21873635
(PMID:26347139)
RGD PMID:26347139 PMID:21873635 RGD:13792537 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,538,282...43,550,633
Ensembl chr17:43,538,285...43,550,643
JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,766,401...158,787,915
Ensembl chr 1:158,765,969...158,787,183
JBrowse link
G Trim34 tripartite motif-containing 34 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,707,172...158,720,214
Ensembl chr 1:158,707,172...158,718,674
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim6 tripartite motif containing 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914
JBrowse link
G Trim65 tripartite motif-containing 65 involved_in IBA
ISO
PMID:21873635
(PMID:26347139)
RGD PMID:26347139 PMID:21873635 RGD:13792537 NCBI chr10:101,357,937...101,364,036
Ensembl chr10:101,357,937...101,364,971
JBrowse link
G Trim68 tripartite motif containing 68 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:157,114,044...157,127,494
Ensembl chr 1:157,114,044...157,127,477
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:26347139) RGD PMID:26347139 NCBI chr 1:245,369,632...245,384,513
Ensembl chr 1:245,369,632...245,384,513
JBrowse link
G Triml1 tripartite motif family-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:48,994,968...49,005,343
Ensembl chr16:48,997,252...49,005,417
JBrowse link
G Triml2 tripartite motif family-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:48,944,838...48,955,453
Ensembl chr16:48,944,838...48,955,453
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in ISO (MGI:5509101|PMID:23878245) RGD PMID:23878245 MGI:5509101 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5818653|PMID:25952549)
UniProt
RGD
PMID:25952549 GO_REF:0000024 MGI:5818653 NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:25126726)
(MGI:5319706|PMID:22539723)
RGD PMID:22539723 PMID:25126726 MGI:5319706 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:23184933) RGD PMID:23184933 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:22739135)
(MGI:5487497|PMID:22739135)
RGD PMID:22739135 MGI:5487497 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l11 BCL2 like 11 IMP RGD PMID:25772147 RGD:13782257 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068
JBrowse link
G Bid BH3 interacting domain death agonist IMP RGD PMID:25772147 RGD:13782257 NCBI chr 4:154,113,198...154,136,353
Ensembl chr 4:154,113,198...154,134,720
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 IMP RGD PMID:25772147 RGD:13782257 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 IMP RGD PMID:23698117 RGD:11561968 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Fbxo7 F-box protein 7 involved_in IBA
IMP
ISO
PMID:21873635
PMID:26310625
(PMID:26310625)
RGD PMID:26310625 PMID:21873635 PMID:26310625 RGD:13792537, RGD:11536096 NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA
ISO
GO_REF:0000107
(MGI:3796473|PMID:18281291)
Ensembl
RGD
PMID:18281291 GO_REF:0000107 MGI:3796473 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Htt huntingtin involved_in IEA
ISO
GO_REF:0000107
(PMID:25686248)
Ensembl
RGD
PMID:25686248 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:26310625) RGD PMID:26310625 NCBI chr 1:48,688,651...49,882,520 JBrowse link
positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) RGD PMID:24005319 NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Hk2 hexokinase 2 involved_in ISO (PMID:23962723) RGD PMID:23962723 NCBI chr 4:115,234,509...115,283,530
Ensembl chr 4:115,234,509...115,283,530
JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO (MGI:5581539|PMID:24709290) RGD PMID:24709290 MGI:5581539 NCBI chr 5:150,652,812...150,661,863
Ensembl chr 5:150,652,812...150,661,863
JBrowse link
G Pink1 PTEN induced kinase 1 IMP RGD PMID:25154397 RGD:12904014 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 involved_in ISO (PMID:27344333) RGD PMID:27344333 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317
JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23708524)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:23708524 GO_REF:0000024 GO_REF:0000107 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Htt huntingtin involved_in ISO
IEA
(PMID:25686248)
GO_REF:0000107
RGD
Ensembl
PMID:25686248 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO MGI:3587950 (MGI:5444071|PMID:22958918) RGD PMID:22958918 MGI:5444071 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:25332431) RGD PMID:25332431 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within ISO (PMID:25332431) RGD PMID:25332431 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
JBrowse link
positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 acts_upstream_of_or_within ISO UniProtKB:O60238 (PMID:19273585) RGD PMID:19273585 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within ISO UniProtKB:Q12983 (PMID:19273585) RGD PMID:19273585 NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
JBrowse link
G Dcn decorin acts_upstream_of_or_within ISO UniProtKB:P35968 (PMID:23798385) RGD PMID:23798385 NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:102548|MGI:2182627 (MGI:4457987|PMID:20453062)
(PMID:20453062)
RGD PMID:20453062 MGI:4457987 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Gnai3 G protein subunit alpha i3 involved_in ISO (PMID:12642577) RGD PMID:12642577 NCBI chr 2:195,742,765...195,780,720
Ensembl chr 2:195,742,642...195,780,742
JBrowse link
G Gpsm1 G-protein signaling modulator 1 involved_in ISO (PMID:12642577) RGD PMID:12642577 NCBI chr 3:9,140,816...9,167,828
Ensembl chr 3:9,128,636...9,167,827
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386679 (MGI:3847365|PMID:19273585)
Ensembl
RGD
PMID:19273585 GO_REF:0000107 MGI:3847365 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO MGI:2429784 (MGI:5430482|PMID:20705711) RGD PMID:20705711 MGI:5430482 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (MGI:5819337|PMID:23778976) RGD PMID:23778976 MGI:5819337 NCBI chr  X:152,216,485...152,241,476
Ensembl chr  X:152,216,596...152,239,499
JBrowse link
G Il4 interleukin 4 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5702366|PMID:26416964)
GO_REF:0000024
RGD
UniProt
PMID:26416964 PMID:21873635 GO_REF:0000024 MGI:5702366, RGD:13792537 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
UniProtKB:P07585 (PMID:23798385)
GO_REF:0000107
RGD
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 involved_in ISO (MGI:5819337|PMID:23778976) RGD PMID:23778976 MGI:5819337 NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
JBrowse link
G Pafah1b2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 8:46,260,069...46,312,073
Ensembl chr 8:46,261,064...46,279,833
JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:4361989|PMID:17476689) RGD PMID:17476689 MGI:4361989 NCBI chr  X:14,617,582...14,622,851
Ensembl chr  X:14,617,582...14,622,851
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) RGD PMID:20871098 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in ISO (MGI:5574288|PMID:23357852) RGD PMID:23357852 MGI:5574288 NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 involved_in ISO
IEA
ISS
UniProtKB:Q96DA2 (PMID:27103069), (PMID:27334615)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27103069 PMID:27334615 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G Rufy4 RUN and FYVE domain containing 4 involved_in IBA
ISO
PMID:21873635
(PMID:26416964)
RGD PMID:26416964 PMID:21873635 RGD:13792537 NCBI chr 9:75,702,937...75,727,719
Ensembl chr 9:75,703,750...75,723,525
JBrowse link
G Scoc short coiled-coil protein involved_in ISO
ISS
(PMID:22354037)
GO_REF:0000024
RGD
GO_Central
PMID:22354037 GO_REF:0000024 NCBI chr19:24,659,651...24,689,236
Ensembl chr19:24,659,651...24,693,217
JBrowse link
G Sesn1 sestrin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
JBrowse link
G Sesn2 sestrin 2 involved_in ISO
IBA
(PMID:23274085)
PMID:21873635
RGD PMID:23274085 PMID:21873635 RGD:13792537 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
JBrowse link
G Sesn3 sestrin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3776699|PMID:18296641), (MGI:4940431|PMID:21189328)
(PMID:18296641)
Ensembl
RGD
PMID:18296641 PMID:21189328 GO_REF:0000107 MGI:3776699 MGI:4940431 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:6305034|PMID:30568238)
GO_REF:0000024
(PMID:30568238), (PMID:30842662)
RGD
UniProt
PMID:30568238 PMID:30842662 PMID:21873635 GO_REF:0000024 MGI:6305034, RGD:13792537 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 1:83,586,713...83,616,971
Ensembl chr 1:83,586,718...83,616,892
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (PMID:27103069) RGD PMID:27103069 NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO
IBA
(PMID:22178386)
PMID:21873635
RGD PMID:22178386 PMID:21873635 RGD:13792537 NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677
JBrowse link
G Tsc1 TSC complex subunit 1 IDA RGD PMID:23435171 RGD:10448950 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4457987|PMID:20453062)
(MGI:5819337|PMID:23778976)
UniProtKB:Q61037 (PMID:23778976)
Ensembl
RGD
PMID:20453062 PMID:23778976 GO_REF:0000107 MGI:4457987 MGI:5819337 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 involved_in ISO
IEA
(PMID:22922758)
GO_REF:0000107
RGD
Ensembl
PMID:22922758 GO_REF:0000107 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:28608965 RGD:13432560 NCBI chr 1:48,688,