ONTOLOGY REPORT - ANNOTATIONS
Term: process utilizing autophagic mechanism
Accession: GO:0061919
browse the term
Definition: A cellular process involving delivery of a portion of the cytoplasm to lysosomes or to the plant or fungal vacuole that does not involve direct transport through the endocytic or vacuolar protein sorting (Vps) pathways. This process typically leads to degradation of the cargo; however, it can also be used to deliver resident proteins, such as in the cytoplasm-to-vacuole targeting (Cvt) pathway.
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Atg4a
autophagy related 4A, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:104,665,345...104,765,271
Ensembl chr X:104,665,345...104,765,268
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Atg4b
autophagy related 4B, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
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Atg4c
autophagy related 4C, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:113,867,218...113,935,534
Ensembl chr 5:113,867,092...113,934,830
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Atg4d
autophagy related 4D, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
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Atg5
autophagy related 5
involved_in
IEA ISO
GO_REF:0000107 (MGI:5751672|PMID:22982048) (PMID:22982048)
Ensembl RGD
PMID:22982048
GO_REF:0000107 MGI:5751672
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Sqstm1
sequestosome 1
involved_in
ISS ISO IBA IEA
GO_REF:0000024 UniProtKB:Q562E7 (PMID:17580304), (PMID:22017874), (PMID:28404643), (PMID:29343546), (PMID:29507397), (PMID:31857589), (PMID:37306101), (PMID:37802024) GO_REF:0000033 GO_REF:0000118 (MGI:6212926|PMID:25723488), (MGI:6504643|PMID:33397898)
UniProt RGD GO_Central TreeGrafter
PMID:17580304 PMID:22017874 PMID:25723488 PMID:28404643 PMID:29343546 PMID:29507397 PMID:31857589 PMID:33397898 PMID:37306101 PMID:37802024 More...
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:6212926 MGI:6504643
NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
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Ubqln1
ubiquilin 1
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:21143716)
Ensembl UniProt RGD
PMID:21143716
GO_REF:0000024 GO_REF:0000107
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
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Wdfy3
WD repeat and FYVE domain containing 3
involved_in
ISO IBA
(PMID:20168092), (PMID:20417604) GO_REF:0000033
RGD GO_Central
PMID:20168092 PMID:20417604
GO_REF:0000033
NCBI chr14:7,578,245...7,810,491
Ensembl chr14:7,606,628...7,810,482
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Wdr81
WD repeat domain 81
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 (PMID:28404643)
UniProt GO_Central Ensembl RGD
PMID:28404643
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:60,281,969...60,295,374
Ensembl chr10:60,281,972...60,295,296
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Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO IBA
(PMID:20921139), (PMID:25215947) GO_REF:0000033 (PMID:23524951)
RGD GO_Central
PMID:20921139 PMID:23524951 PMID:25215947
GO_REF:0000033
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
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Ap4m1
adaptor related protein complex 4 subunit mu 1
involved_in
ISO ISS
(PMID:29180427) GO_REF:0000024
RGD UniProt
PMID:29180427
GO_REF:0000024
NCBI chr12:17,049,766...17,055,954
Ensembl chr12:17,049,777...17,058,026
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Ap5z1
adaptor related protein complex 5 subunit zeta 1
acts_upstream_of_or_within
ISO
MGI:4460281 (MGI:6355740|PMID:30930081)
RGD
PMID:30930081
MGI:6355740
NCBI chr12:12,093,834...12,109,043
Ensembl chr12:12,093,834...12,108,511
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Atg10
autophagy related 10
involved_in
ISO
(PMID:16963840)
RGD
PMID:16963840
NCBI chr 2:22,109,304...22,398,313
Ensembl chr 2:22,108,426...22,398,233
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Atg101
autophagy related 101
involved_in
ISO IEA IBA
(PMID:19225151), (PMID:19597335) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107 (MGI:6810791|PMID:19225151)
RGD TreeGrafter GO_Central Ensembl
PMID:19225151 PMID:19597335
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:6810791
NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633
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Atg12
autophagy related 12
involved_in
ISO IEA
(MGI:2137756|PMID:11266458) GO_REF:0000118 GO_REF:0000002
RGD TreeGrafter InterPro
PMID:11266458
GO_REF:0000002 GO_REF:0000118 MGI:2137756
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
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Atg13
autophagy related 13
acts_upstream_of_or_within involved_in
ISO
(PMID:19211835) (MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151) (PMID:19211835), (PMID:19225151)
RGD
PMID:19211835 PMID:19225151 PMID:19258318
MGI:3849242 MGI:6810791
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
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Atg14
autophagy related 14
involved_in
ISO IBA
(PMID:19270696), (PMID:20713597) GO_REF:0000033
RGD GO_Central
PMID:19270696 PMID:20713597
GO_REF:0000033
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
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Atg16l1
autophagy related 16-like 1
involved_in
ISO IBA
(MGI:2137756|PMID:11266458) GO_REF:0000033 (PMID:30778222)
RGD GO_Central
PMID:11266458 PMID:30778222
GO_REF:0000033 MGI:2137756
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
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Atg16l2
autophagy related 16-like 2
NOT|involved_in
ISO IBA
(MGI:6436405|PMID:22082872) GO_REF:0000033 (MGI:2137756|PMID:11266458)
RGD GO_Central
PMID:11266458 PMID:22082872
GO_REF:0000033 MGI:2137756 MGI:6436405
NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
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Atg2a
autophagy related 2A
involved_in
ISO IBA
(PMID:28561066) GO_REF:0000033
RGD GO_Central
PMID:28561066
GO_REF:0000033
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
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Atg2b
autophagy related 2B
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
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Atg3
autophagy related 3
involved_in acts_upstream_of_or_within
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 (MGI:4835103|PMID:20723759), (MGI:6206844|PMID:24747438) (MGI:4880808|PMID:21220506) GO_REF:0000107 (PMID:33446636)
UniProt GO_Central TreeGrafter RGD Ensembl
PMID:20723759 PMID:21220506 PMID:24747438 PMID:33446636
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:4835103 MGI:4880808 MGI:6206844
NCBI chr11:55,624,914...55,653,249
Ensembl chr11:55,624,917...55,653,224
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Atg4a
autophagy related 4A, cysteine peptidase
involved_in
ISO IBA
(PMID:21177865) GO_REF:0000033
RGD GO_Central
PMID:21177865
GO_REF:0000033
NCBI chr X:104,665,345...104,765,271
Ensembl chr X:104,665,345...104,765,268
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Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO IBA
(MGI:5630037|PMID:25578879) GO_REF:0000033 (PMID:21177865)
RGD GO_Central
PMID:21177865 PMID:25578879
GO_REF:0000033 MGI:5630037
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
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Atg4c
autophagy related 4C, cysteine peptidase
involved_in
ISO IBA
(PMID:21177865) GO_REF:0000033
RGD GO_Central
PMID:21177865
GO_REF:0000033
NCBI chr 5:113,867,218...113,935,534
Ensembl chr 5:113,867,092...113,934,830
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Atg4d
autophagy related 4D, cysteine peptidase
involved_in
ISO IBA
(PMID:21177865) GO_REF:0000033
RGD GO_Central
PMID:21177865
GO_REF:0000033
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
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Atg5
autophagy related 5
involved_in acts_upstream_of_or_within
IMP IEA ISO
GO_REF:0000118 GO_REF:0000107 (PMID:23202584) (MGI:2137756|PMID:11266458) (MGI:5500861|PMID:23704209)
TreeGrafter Ensembl RGD
PMID:11266458 PMID:23202584 PMID:23704209 PMID:16420522
GO_REF:0000107 GO_REF:0000118 MGI:2137756 MGI:5500861 , RGD:1643189
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Atg7
autophagy related 7
involved_in acts_upstream_of_or_within
ISO IEA
(MGI:4420830|PMID:20080761) GO_REF:0000118 GO_REF:0000107 (PMID:22170151) (MGI:5500861|PMID:23704209)
RGD TreeGrafter Ensembl
PMID:20080761 PMID:22170151 PMID:23704209
GO_REF:0000107 GO_REF:0000118 MGI:4420830 MGI:5500861
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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Atg9a
autophagy related 9A
acts_upstream_of_or_within involved_in
ISO ISS
MGI:4417824 (MGI:5494547|PMID:22456507), (MGI:5509287|PMID:23402761) GO_REF:0000024 (PMID:29180427), (PMID:29437695), (PMID:32513819), (PMID:33468622) (PMID:15755735), (PMID:22456507)
RGD UniProt
PMID:15755735 PMID:22456507 PMID:23402761 PMID:29180427 PMID:29437695 PMID:32513819 PMID:33468622 More...
GO_REF:0000024 MGI:5494547 MGI:5509287
NCBI chr 9:76,677,403...76,688,050
Ensembl chr 9:76,677,404...76,687,986
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Atg9b
autophagy related 9B
acts_upstream_of_or_within
ISO
(PMID:15755735)
RGD
PMID:15755735
NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
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Atp2a2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28890335)
UniProt RGD
PMID:28890335
GO_REF:0000024
NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
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Becn1
beclin 1
involved_in
IMP IBA IEA ISO ISS
GO_REF:0000033 GO_REF:0000118 (PMID:25891078) (MGI:5619439|PMID:23332761) GO_REF:0000024
GO_Central TreeGrafter RGD UniProt
PMID:23332761 PMID:25891078 PMID:16420522
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5619439 , RGD:1643189
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
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Becn2
beclin 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:87,842,980...87,892,410
Ensembl chr13:87,844,531...87,845,787
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Ctsd
cathepsin D
acts_upstream_of_or_within
ISO
(MGI:3057045|PMID:15452145)
RGD
PMID:15452145
MGI:3057045
NCBI chr 1:197,527,467...197,539,343
Ensembl chr 1:197,527,467...197,539,488
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Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
ISO IBA
(PMID:21072319) GO_REF:0000033
RGD GO_Central
PMID:21072319
GO_REF:0000033
NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
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Emc6
ER membrane protein complex subunit 6
involved_in
ISO IBA
(PMID:23182941) GO_REF:0000033
RGD GO_Central
PMID:23182941
GO_REF:0000033
NCBI chr10:57,794,072...57,795,671
Ensembl chr10:57,793,685...57,796,217
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ENSRNOG00000062718
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr 1:206,501,714...206,508,984
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ENSRNOG00000063835
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr 5:69,986,346...69,986,519
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ENSRNOG00000063933
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr X:102,568,460...102,569,785
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ENSRNOG00000067112
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr 3:91,539,051...91,540,059
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Epm2a
EPM2A glucan phosphatase, laforin
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2182627 (MGI:5913112|PMID:24430976) GO_REF:0000107
RGD Ensembl
PMID:24430976
GO_REF:0000107 MGI:5913112
NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
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Gabarap
GABA type A receptor-associated protein
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr10:54,714,777...54,718,099
Ensembl chr10:54,714,198...54,717,765
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Gabarapl1
GABA type A receptor associated protein like 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
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Gabarapl2
GABA type A receptor associated protein like 2
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628 Ensembl chr 8:39,910,534...39,924,628
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Gabarapl3
GABA type A receptor associated protein like 3
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 8:89,246,175...89,247,132
Ensembl chr 8:89,246,195...89,247,139
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Gabarapl4
gamma-aminobutyric acid receptor associated protein like 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:55,052,756...55,053,109
Ensembl chr19:55,052,756...55,053,109
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Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:16888103) (MGI:3656111|PMID:16888103)
RGD
PMID:16888103
MGI:3656111
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
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Map1lc3a
microtubule-associated protein 1 light chain 3 alpha
involved_in
ISO IBA IDA
(PMID:24290141) GO_REF:0000033 PMID:11060023
RGD GO_Central
PMID:24290141 PMID:11060023
GO_REF:0000033, RGD:8554284
NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
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Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
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Mtm1
myotubularin 1
acts_upstream_of
ISO
MGI:2450997 (MGI:5510937|PMID:23695157)
RGD
PMID:23695157
MGI:5510937
NCBI chr 6:488,923...506,882
Ensembl chr 6:488,969...506,860
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Nsfl1c
NSFL1 cofactor
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
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Pacs2
phosphofurin acidic cluster sorting protein 2
acts_upstream_of_or_within
ISO
(PMID:23455425)
RGD
PMID:23455425
NCBI chr 6:132,096,992...132,156,702
Ensembl chr 6:132,096,901...132,154,583
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Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
involved_in acts_upstream_of_or_within
IMP IEA IBA ISO
GO_REF:0000118 GO_REF:0000033 (PMID:33637724) (MGI:5565574|PMID:24098492)
TreeGrafter GO_Central RGD
PMID:24098492 PMID:33637724 PMID:12453151
GO_REF:0000033 GO_REF:0000118 MGI:5565574 , RGD:2303129
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
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Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:2149116 (MGI:3057045|PMID:15452145)
RGD
PMID:15452145
MGI:3057045
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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Rab19
RAB19, member RAS oncogene family
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:68,157,159...68,166,889
Ensembl chr 4:68,156,881...68,166,886
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Rab1a
RAB1A, member RAS oncogene family
involved_in
ISO IBA ISS
(PMID:22939626) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:22939626
GO_REF:0000024 GO_REF:0000033
NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
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Rab1b
RAB1B, member RAS oncogene family
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868 Ensembl chr X:202,405,759...202,413,868
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Rab23
RAB23, member RAS oncogene family
involved_in
ISO IBA
(PMID:22452336) GO_REF:0000033
RGD GO_Central
PMID:22452336
GO_REF:0000033
NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
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Rab33b
RAB33B, member RAS oncogene family
involved_in
ISO
(MGI:5447922|PMID:18448665)
RGD
PMID:18448665
MGI:5447922
NCBI chr 2:135,528,116...135,538,719
Ensembl chr 2:135,528,116...135,538,719
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Rab43
RAB43, member RAS oncogene family
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:120,249,650...120,269,174
Ensembl chr 4:120,249,879...120,269,174
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Rab7a
RAB7A, member RAS oncogene family
involved_in
ISO
(PMID:19956673)
RGD
PMID:19956673
NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
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Rb1cc1
RB1-inducible coiled-coil 1
involved_in
ISO IBA
(PMID:19225151), (PMID:28890335) GO_REF:0000033 (PMID:23392225) (MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151)
RGD GO_Central
PMID:19225151 PMID:19258318 PMID:23392225 PMID:28890335
GO_REF:0000033 MGI:3849242 MGI:6810791
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
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Rufy4
RUN and FYVE domain containing 4
involved_in
ISO IBA
(PMID:26416964) GO_REF:0000033
RGD GO_Central
PMID:26416964
GO_REF:0000033
NCBI chr 9:75,702,937...75,727,719
Ensembl chr 9:75,703,750...75,723,525
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Sting1
stimulator of interferon response cGAMP interactor 1
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (PMID:30568238), (PMID:30842662), (PMID:37535724) GO_REF:0000107 (MGI:6305034|PMID:30568238)
UniProt GO_Central RGD Ensembl
PMID:30568238 PMID:30842662 PMID:37535724
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6305034
NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
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Stx12
syntaxin 12
involved_in
ISO IEA
(PMID:24095276) GO_REF:0000107
RGD Ensembl
PMID:24095276
GO_REF:0000107
NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377
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Synpo2
synaptopodin 2
involved_in
IMP
PMID:23434281
UniProt
PMID:23434281
RGD:12793031
NCBI chr 2:211,217,099...211,371,267
Ensembl chr 2:211,216,783...211,371,267
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Tcirg1
T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3
acts_upstream_of_or_within
ISO
(MGI:6296816|PMID:23908015)
RGD
PMID:23908015
MGI:6296816
NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
G
Tmem41b
transmembrane protein 41B
involved_in
ISS ISO
GO_REF:0000024 (PMID:30093494), (PMID:30126924), (PMID:30933966)
UniProt RGD
PMID:30093494 PMID:30126924 PMID:30933966
GO_REF:0000024
NCBI chr 1:164,012,585...164,026,967
Ensembl chr 1:164,012,592...164,026,933
G
Tp53inp1
tumor protein p53 inducible nuclear protein 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
G
Tp53inp2
tumor protein p53 inducible nuclear protein 2
involved_in
ISO IBA IEA ISS
(PMID:19056683) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:19056683
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
G
Traf6
TNF receptor associated factor 6
involved_in
ISO IEA
(PMID:23524951) GO_REF:0000107
RGD Ensembl
PMID:23524951
GO_REF:0000107
NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
G
Ubqln1
ubiquilin 1
involved_in
ISO IEA IBA
(PMID:20529957) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107
RGD TreeGrafter GO_Central Ensembl
PMID:20529957
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
G
Ubqln2
ubiquilin 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:17,853,086...17,856,505
Ensembl chr X:17,853,114...17,856,505
G
Ubxn2a
UBX domain protein 2A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:27,884,364...27,912,767
Ensembl chr 6:27,884,680...27,912,649 Ensembl chr20:27,884,680...27,912,649
G
Ubxn2b
UBX domain protein 2B
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in
ISO IBA
(PMID:19225151), (PMID:28890335) GO_REF:0000033 (MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151)
RGD GO_Central
PMID:19225151 PMID:19258318 PMID:28890335
GO_REF:0000033 MGI:3849242 MGI:6810791
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Ulk3
unc-51 like kinase 3
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 8:57,992,396...58,000,220
Ensembl chr 8:57,992,723...57,999,467
G
Vmp1
vacuole membrane protein 1
involved_in
ISO IEA ISS
(PMID:28890335), (PMID:30093494), (PMID:30933966) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:28890335 PMID:30093494 PMID:30933966
GO_REF:0000024 GO_REF:0000107
NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
G
Wdr45
WD repeat domain 45
involved_in
ISO ISS
(PMID:28561066) GO_REF:0000024
RGD UniProt
PMID:28561066
GO_REF:0000024
NCBI chr X:14,776,280...14,782,202
Ensembl chr X:14,776,293...14,782,202
G
Wdr45b
WD repeat domain 45B
involved_in
ISO
(PMID:28561066)
RGD
PMID:28561066
NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
G
Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
ISO
(PMID:28561066)
RGD
PMID:28561066
NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:20505359), (PMID:28561066), (PMID:28890335)
UniProt RGD
PMID:20505359 PMID:28561066 PMID:28890335
GO_REF:0000024
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
G
Afg2a
AFG2 AAA ATPase homolog A
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 2:120,306,417...120,497,707
Ensembl chr 2:120,306,412...120,497,705
G
Atg12
autophagy related 12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
G
Atg14
autophagy related 14
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
G
Becn1
beclin 1
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Chmp1a
charged multivesicular body protein 1A
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
G
Chmp1b
charged multivesicular body protein 1B
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr18:60,740,349...60,742,879
G
Chmp2a
charged multivesicular body protein 2A
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
G
Chmp2b
charged multivesicular body protein 2B
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
G
Chmp3
charged multivesicular body protein 3
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
G
Chmp4b
charged multivesicular body protein 4B
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844
G
Chmp4c
charged multivesicular body protein 4C
involved_in
ISO IEA
(PMID:17984323) GO_REF:0000107
RGD Ensembl
PMID:17984323
GO_REF:0000107
NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
G
Chmp5
charged multivesicular body protein 5
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
G
Chmp6
charged multivesicular body protein 6
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
G
Chmp7
charged multivesicular body protein 7
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
acts_upstream_of_or_within
ISO
MGI:2388888 (MGI:3690270|PMID:16714284)
RGD
PMID:16714284
MGI:3690270
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
G
Epg5
ectopic P-granules 5 autophagy tethering factor
acts_upstream_of_or_within involved_in
ISO IBA
MGI:5505596 (MGI:5488852|PMID:23479740) GO_REF:0000033
RGD GO_Central
PMID:23479740
GO_REF:0000033 MGI:5488852
NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
G
Gabarap
GABA type A receptor-associated protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:54,714,777...54,718,099
Ensembl chr10:54,714,198...54,717,765
G
Gabarapl1
GABA type A receptor associated protein like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
G
Gabarapl2
GABA type A receptor associated protein like 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628 Ensembl chr 8:39,910,534...39,924,628
G
Gabarapl3
GABA type A receptor associated protein like 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:89,246,175...89,247,132
Ensembl chr 8:89,246,195...89,247,139
G
Gabarapl4
gamma-aminobutyric acid receptor associated protein like 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:55,052,756...55,053,109
Ensembl chr19:55,052,756...55,053,109
G
Irgm
immunity-related GTPase M
involved_in
ISS ISO
GO_REF:0000024 (MGI:5292307|PMID:21757726)
UniProt RGD
PMID:21757726
GO_REF:0000024 MGI:5292307
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
Lamp2
lysosomal-associated membrane protein 2
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (MGI:5805578|PMID:27628032)
UniProt GO_Central TreeGrafter Ensembl RGD
PMID:27628032
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5805578
NCBI chr X:117,173,097...117,222,090
Ensembl chr X:117,057,606...117,260,522
G
Lix1
limb and CNS expressed 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:58,128,961...58,187,554
Ensembl chr 1:58,128,961...58,185,964
G
Lix1l
limb and CNS expressed 1 like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:184,136,018...184,161,918
Ensembl chr 2:184,136,038...184,161,916
G
Map1lc3a
microtubule-associated protein 1 light chain 3 alpha
involved_in
ISO IBA
(PMID:28223137) GO_REF:0000033
RGD GO_Central
PMID:28223137
GO_REF:0000033
NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
G
Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
ISO IBA IEA
(PMID:28223137) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:28223137
GO_REF:0000033 GO_REF:0000118
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
G
Mcoln1
mucolipin TRP cation channel 1
acts_upstream_of_or_within
ISO
MGI:3794204 (MGI:4839416|PMID:20600908)
RGD
PMID:20600908
MGI:4839416
NCBI chr12:1,560,341...1,574,252
Ensembl chr12:1,560,359...1,574,252
G
Mfsd8
major facilitator superfamily domain containing 8
acts_upstream_of_or_within
ISO
(MGI:6155546|PMID:29514215)
RGD
PMID:29514215
MGI:6155546
NCBI chr 2:123,822,042...123,847,808
Ensembl chr 2:123,816,614...123,857,971
G
Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
involved_in
ISO IEA
(PMID:10625637) GO_REF:0000107
RGD Ensembl
PMID:10625637
GO_REF:0000107
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
G
Pik3r4
phosphoinositide-3-kinase, regulatory subunit 4
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
G
Rubcnl
rubicon like autophagy enhancer
involved_in
ISO IBA
(PMID:28306502), (PMID:30704899) GO_REF:0000033 (MGI:6282647|PMID:30704899)
RGD GO_Central
PMID:28306502 PMID:30704899
GO_REF:0000033 MGI:6282647
NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
G
Snap29
synaptosome associated protein 29
involved_in
ISS ISO
GO_REF:0000024 (PMID:23217709)
UniProt RGD
PMID:23217709
GO_REF:0000024
NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
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Snapin
SNAP-associated protein
acts_upstream_of_or_within
ISO
MGI:3608768 (MGI:4879078|PMID:20920792), (MGI:5504339|PMID:22797916)
RGD
PMID:20920792 PMID:22797916
MGI:4879078 MGI:5504339
NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
G
Snx14
sorting nexin 14
involved_in
ISO IBA
(PMID:25848753) GO_REF:0000033
RGD GO_Central
PMID:25848753
GO_REF:0000033
NCBI chr 8:89,283,673...89,390,597
Ensembl chr 8:89,298,114...89,390,580
G
Stx17
syntaxin 17
involved_in
ISO ISS
(PMID:23217709), (PMID:24554770), (PMID:28306502) GO_REF:0000024
RGD UniProt
PMID:23217709 PMID:24554770 PMID:28306502
GO_REF:0000024
NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
G
Tecpr1
tectonin beta-propeller repeat containing 1
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:22342342)
UniProt GO_Central RGD
PMID:22342342
GO_REF:0000024 GO_REF:0000033
NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
G
Ubqln1
ubiquilin 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:23459205)
Ensembl RGD
PMID:23459205
GO_REF:0000107
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
G
Uvrag
UV radiation resistance associated
involved_in
ISO
(PMID:28306502)
RGD
PMID:28306502
NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
G
Vamp7
vesicle-associated membrane protein 7
NOT|involved_in
ISO
(PMID:23217709)
RGD
PMID:23217709
NCBI chr12:16,728,486...16,764,261
Ensembl chr12:16,728,524...16,764,097
G
Vamp8
vesicle-associated membrane protein 8
involved_in
ISO ISS
(PMID:23217709) GO_REF:0000024
RGD UniProt
PMID:23217709
GO_REF:0000024
NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
G
Vcp
valosin-containing protein
involved_in
ISO IBA ISS
(PMID:20104022) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:20104022
GO_REF:0000024 GO_REF:0000033
NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
G
Vipas39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
NOT|involved_in
ISO
(PMID:25783203)
RGD
PMID:25783203
NCBI chr 6:106,888,284...106,913,139
Ensembl chr 6:106,888,284...106,913,117
G
Vps16
VPS16 core subunit of CORVET and HOPS complexes
involved_in
ISO
(PMID:25783203)
RGD
PMID:25783203
NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441
G
Vps33a
VPS33A core subunit of CORVET and HOPS complexes
involved_in
ISO IEA
(PMID:24554770), (PMID:25783203) GO_REF:0000107
RGD Ensembl
PMID:24554770 PMID:25783203
GO_REF:0000107
NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393
G
Vps33b
VPS33B, late endosome and lysosome associated
NOT|involved_in
ISO
(PMID:25783203)
RGD
PMID:25783203
NCBI chr 1:134,223,967...134,247,232
Ensembl chr 1:134,223,949...134,246,970
G
Vti1b
vesicle transport through interaction with t-SNAREs 1B
NOT|involved_in
ISO
(PMID:23217709)
RGD
PMID:23217709
NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
NOT|involved_in
ISO
(PMID:20505359)
RGD
PMID:20505359
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
G
Atg14
autophagy related 14
involved_in
ISO IBA
(PMID:25686604) GO_REF:0000033
RGD GO_Central
PMID:25686604
GO_REF:0000033
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
G
Atp2a2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
involved_in
ISO ISS
(PMID:28890335) GO_REF:0000024
RGD UniProt
PMID:28890335
GO_REF:0000024
NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
G
Calm1
calmodulin 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:28890335)
UniProt Ensembl RGD
PMID:28890335
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
G
Calm2
calmodulin 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28890335)
UniProt RGD
PMID:28890335
GO_REF:0000024
NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287 Ensembl chr15:7,091,567...7,104,287
G
Calm3
calmodulin 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:28890335)
UniProt RGD
PMID:28890335
GO_REF:0000024
NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
G
Snap29
synaptosome associated protein 29
involved_in
ISO IEA
(PMID:25686604) GO_REF:0000107
RGD Ensembl
PMID:25686604
GO_REF:0000107
NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
G
Stx17
syntaxin 17
involved_in
ISO
(PMID:25686604)
RGD
PMID:25686604
NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
G
Vamp8
vesicle-associated membrane protein 8
involved_in
ISO IEA
(PMID:25686604) GO_REF:0000107
RGD Ensembl
PMID:25686604
GO_REF:0000107
NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
G
Vmp1
vacuole membrane protein 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:28890335)
UniProt Ensembl RGD
PMID:28890335
GO_REF:0000024 GO_REF:0000107
NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
G
Atp13a2
ATPase cation transporting 13A2
involved_in
ISO
(PMID:22186024)
RGD
PMID:22186024
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
G
Gba1
glucosylceramidase beta 1
acts_upstream_of_or_within
ISO
(MGI:5501380|PMID:23707074)
RGD
PMID:23707074
MGI:5501380
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
G
Pik3c2a
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
acts_upstream_of_or_within
ISO
MGI:2685045 (MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
G
Pik3c2b
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
acts_upstream_of_or_within
ISO
MGI:1203729 (MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612
G
Spg11
SPG11 vesicle trafficking associated, spatacsin
acts_upstream_of_or_within
ISO
(PMID:25365221)
RGD
PMID:25365221
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
G
Zfyve26
zinc finger FYVE-type containing 26
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:25365221) GO_REF:0000107
RGD Ensembl
PMID:25365221
GO_REF:0000107
NCBI chr 6:98,031,874...98,095,538
Ensembl chr 6:98,032,520...98,095,480
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Rubcnl
rubicon like autophagy enhancer
involved_in
ISO IBA
(PMID:28306502) GO_REF:0000033
RGD GO_Central
PMID:28306502
GO_REF:0000033
NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
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Arl8b
ADP-ribosylation factor like GTPase 8B
involved_in
ISO ISS
(PMID:28325809) GO_REF:0000024
RGD UniProt
PMID:28325809
GO_REF:0000024
NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
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Atp13a2
ATPase cation transporting 13A2
involved_in
ISO IBA
(PMID:30538141) GO_REF:0000033 (MGI:6273736|PMID:30538141)
RGD GO_Central
PMID:30538141
GO_REF:0000033 MGI:6273736
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
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Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
involved_in
ISO
(MGI:5698740|PMID:26450516)
RGD
PMID:26450516
MGI:5698740
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
G
Diaph3
diaphanous-related formin 3
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:6508945|PMID:33036023) GO_REF:0000107
RGD Ensembl
PMID:33036023
GO_REF:0000107 MGI:6508945
NCBI chr15:62,543,375...63,013,060
Ensembl chr15:62,543,375...63,012,975
G
Pip4k2a
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:6159303|PMID:29727621)
UniProt Ensembl RGD
PMID:29727621
GO_REF:0000024 GO_REF:0000107 MGI:6159303
NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
G
Pip4k2b
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:6159303|PMID:29727621)
UniProt Ensembl RGD
PMID:29727621
GO_REF:0000024 GO_REF:0000107 MGI:6159303
NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
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Plekhm1
pleckstrin homology and RUN domain containing M1
involved_in
ISO ISS
(PMID:28325809) GO_REF:0000024
RGD UniProt
PMID:28325809
GO_REF:0000024
NCBI chr10:88,313,837...88,366,182
Ensembl chr10:88,314,651...88,362,412
G
Rubcnl
rubicon like autophagy enhancer
involved_in
ISO IBA
(PMID:28306502) GO_REF:0000033
RGD GO_Central
PMID:28306502
GO_REF:0000033
NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
G
Tom1
target of myb1 membrane trafficking protein
involved_in
ISO
(PMID:23023224)
RGD
PMID:23023224
NCBI chr19:13,405,482...13,440,384
Ensembl chr19:13,405,501...13,440,384
G
Vps39
VPS39 subunit of HOPS complex
involved_in
ISO
(PMID:33422265)
RGD
PMID:33422265
NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
G
AABR07001519.1
involved_in
IEA
GO_REF:0000043 GO_REF:0000104
UniProt
GO_REF:0000043 GO_REF:0000104
G
AABR07025074.1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
Ensembl chr16:25,584,241...25,585,849
G
AABR07035218.1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
G
AC108595.1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
Ensembl chr 7:122,951,378...122,953,062
G
Acvr2a
activin A receptor type 2A
IMP
RGD
PMID:27769861
RGD:329853763
NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
G
Ambra1
autophagy and beclin 1 regulator 1
acts_upstream_of_or_within
ISO
MGI:3715977 (MGI:3715542|PMID:17589504)
RGD
PMID:17589504
MGI:3715542
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
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Anxa7
annexin A7
involved_in
ISO
(PMID:24007983)
RGD
PMID:24007983
NCBI chr15:3,821,798...3,849,659
Ensembl chr15:3,821,845...3,849,385
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Ap5z1
adaptor related protein complex 5 subunit zeta 1
acts_upstream_of_or_within
ISO
MGI:4460281 (MGI:6355740|PMID:30930081)
RGD
PMID:30930081
MGI:6355740
NCBI chr12:12,093,834...12,109,043
Ensembl chr12:12,093,834...12,108,511
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Arsa
arylsulfatase A
IDA
RGD
PMID:8037
RGD:1599235
NCBI chr 7:120,542,788...120,547,577
Ensembl chr 7:120,543,362...120,548,783
G
Arsb
arylsulfatase B
IDA
RGD
PMID:8037
RGD:1599235
NCBI chr 2:25,002,210...25,162,675
Ensembl chr 2:25,002,346...25,162,671
G
Atg10
autophagy related 10
involved_in
ISO
(PMID:15657430), (PMID:17256008)
RGD
PMID:15657430 PMID:17256008
NCBI chr 2:22,109,304...22,398,313
Ensembl chr 2:22,108,426...22,398,233
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Atg12
autophagy related 12
IMP
RGD
PMID:18059433
RGD:2301217
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
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Atg14
autophagy related 14
involved_in
ISO
(MGI:4438180|PMID:19270696), (MGI:5619471|PMID:19270693)
RGD
PMID:19270693 PMID:19270696
MGI:4438180 MGI:5619471
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
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Atg16l2
autophagy related 16-like 2
NOT|involved_in
ISO
(MGI:6436405|PMID:22082872)
RGD
PMID:22082872
MGI:6436405
NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
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Atg3
autophagy related 3
involved_in
IEP ISO ISS
(MGI:5607237|PMID:18768753) GO_REF:0000024
RGD UniProt
PMID:18768753 PMID:17110912
GO_REF:0000024 MGI:5607237 , RGD:1643237
NCBI chr11:55,624,914...55,653,249
Ensembl chr11:55,624,917...55,653,224
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Atg4a
autophagy related 4A, cysteine peptidase
involved_in
ISO
(PMID:30661429)
RGD
PMID:30661429
NCBI chr X:104,665,345...104,765,271
Ensembl chr X:104,665,345...104,765,268
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Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO IEA
(PMID:18387192), (PMID:26378241), (PMID:27527864), (PMID:28821708) GO_REF:0000043 (MGI:4829568|PMID:20577052)
RGD UniProt
PMID:18387192 PMID:20577052 PMID:26378241 PMID:27527864 PMID:28821708
GO_REF:0000043 MGI:4829568
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
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Atg4c
autophagy related 4C, cysteine peptidase
involved_in
ISO
(PMID:30661429)
RGD
PMID:30661429
NCBI chr 5:113,867,218...113,935,534
Ensembl chr 5:113,867,092...113,934,830
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Atg4d
autophagy related 4D, cysteine peptidase
involved_in
ISO
(PMID:30661429)
RGD
PMID:30661429
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
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Atg5
autophagy related 5
involved_in
IMP ISO ISS
UniProtKB:O95352 (PMID:26812546), (PMID:28389568) (MGI:2137756|PMID:11266458), (MGI:5509101|PMID:23878245) GO_REF:0000024
RGD UniProt
PMID:11266458 PMID:23878245 PMID:26812546 PMID:28389568 PMID:18059433
GO_REF:0000024 MGI:2137756 MGI:5509101 , RGD:2301217
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Atg7
autophagy related 7
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 UniProtKB:Q9H1Y0 (PMID:20543840), (PMID:24681637), (PMID:28389568) (PMID:25327288) (MGI:4420830|PMID:20080761), (MGI:6208175|PMID:29937374) MGI:2137515|MGI:2176052|MGI:2176073|MGI:3587769|MGI:3587771 (MGI:3587473|PMID:15866887), (MGI:3653078|PMID:16885219), (MGI:3711608|PMID:17450150), (MGI:3722981|PMID:17726112), (MGI:4829568|PMID:20577052)
UniProt RGD
PMID:15866887 PMID:16885219 PMID:17450150 PMID:17726112 PMID:20080761 PMID:20543840 PMID:20577052 PMID:24681637 PMID:25327288 PMID:28389568 PMID:29937374 More...
GO_REF:0000024 MGI:3587473 MGI:3653078 MGI:3711608 MGI:3722981 MGI:4420830 MGI:4829568 MGI:6208175
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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Atg9a
autophagy related 9A
acts_upstream_of_or_within involved_in
ISO
MGI:4417824 (MGI:4414713|PMID:19926846) (MGI:6791812|PMID:27587839)
RGD
PMID:19926846 PMID:27587839
MGI:4414713 MGI:6791812
NCBI chr 9:76,677,403...76,688,050
Ensembl chr 9:76,677,404...76,687,986
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Atp13a2
ATPase cation transporting 13A2
involved_in
ISO
(PMID:27278822) (MGI:5881999|PMID:27278822)
RGD
PMID:27278822
MGI:5881999
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
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Bcas3
BCAS3, microtubule associated cell migration factor
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:70,213,710...70,673,080
Ensembl chr10:70,214,098...70,673,080
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Becn1
beclin 1
involved_in acts_upstream_of_or_within
IMP ISO ISS
(PMID:23184933), (PMID:23629966), (PMID:24056303), (PMID:25891078) (PMID:28747345) (MGI:5490676|PMID:23629966), (MGI:5619437|PMID:23364696) (MGI:2385984|PMID:12372286), (MGI:3715542|PMID:17589504) GO_REF:0000024
RGD UniProt
PMID:12372286 PMID:17589504 PMID:23184933 PMID:23364696 PMID:23629966 PMID:24056303 PMID:25891078 PMID:28747345 PMID:16697404 PMID:25238224 More...
GO_REF:0000024 MGI:2385984 MGI:3715542 MGI:5490676 MGI:5619437 , RGD:1643194 , RGD:11558011
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
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Becn2
beclin 2
involved_in acts_upstream_of_or_within
ISO
(PMID:23954414) MGI:5550535 (MGI:5528919|PMID:23954414)
RGD
PMID:23954414
MGI:5528919
NCBI chr13:87,842,980...87,892,410
Ensembl chr13:87,844,531...87,845,787
G
Bmal1
basic helix-loop-helix ARNT like 1
acts_upstream_of_or_within
ISO
MGI:2180361 (MGI:5923379|PMID:26945058)
RGD
PMID:26945058
MGI:5923379
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
G
C1h19orf12
similar to human chromosome 19 open reading frame 12
involved_in
ISO
(PMID:26136767)
RGD
PMID:26136767
NCBI chr 1:90,873,578...90,887,205
Ensembl chr 1:90,873,549...90,886,208
G
Chmp1a
charged multivesicular body protein 1A
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
G
Chmp1b
charged multivesicular body protein 1B
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr18:60,740,349...60,742,879
G
Chmp2a
charged multivesicular body protein 2A
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
G
Chmp2b
charged multivesicular body protein 2B
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
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Chmp3
charged multivesicular body protein 3
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
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Chmp4b
charged multivesicular body protein 4B
involved_in
ISO
(PMID:17984323), (PMID:24095276)
RGD
PMID:17984323 PMID:24095276
NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844
G
Chmp4c
charged multivesicular body protein 4C
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
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Chmp5
charged multivesicular body protein 5
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
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Chmp6
charged multivesicular body protein 6
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
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Chmp7
charged multivesicular body protein 7
involved_in
ISO
(PMID:17984323)
RGD
PMID:17984323
NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
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Cisd2
CDGSH iron sulfur domain 2
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:223,828,937...223,853,768
Ensembl chr 2:223,828,937...223,868,946
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Clec16a
C-type lectin domain containing 16A
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
Cltc
clathrin heavy chain
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
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Cog3
component of oligomeric golgi complex 3
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr15:51,020,808...51,071,288
Ensembl chr15:51,020,813...51,070,570
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Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (MGI:4839829|PMID:21037586), (MGI:6147913|PMID:26565691), (MGI:6511400|PMID:22024752)
RGD
PMID:21037586 PMID:22024752 PMID:26565691
MGI:4839829 MGI:6147913 MGI:6511400
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
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Creg1
cellular repressor of E1A-stimulated genes 1
acts_upstream_of_or_within
ISO
MGI:7384603 (MGI:6854654|PMID:33966596)
RGD
PMID:33966596
MGI:6854654
NCBI chr13:78,019,814...78,032,310
Ensembl chr13:78,019,843...78,032,308
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Ctsb
cathepsin B
IEP
RGD
PMID:18567942
RGD:2315511
NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
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Dap
death-associated protein
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752
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Dnm2
dynamin 2
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:29437695), (PMID:32315611) GO_REF:0000024
Ensembl RGD UniProt
PMID:29437695 PMID:32315611
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
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Dram2
DNA damage regulated autophagy modulator 2
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403
G
Drd2
dopamine receptor D2
IDA
RGD
PMID:26649942
RGD:13506953
NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
G
Drd3
dopamine receptor D3
IMP
RGD
PMID:26649942
RGD:13506953
NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
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Ei24
EI24, autophagy associated transmembrane protein
acts_upstream_of_or_within
ISO
MGI:2176173|MGI:5475023 (MGI:5468390|PMID:23074225)
RGD
PMID:23074225
MGI:5468390
NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571
G
ENSRNOG00000063632
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
Ensembl chr10:100,935,824...100,936,291
G
ENSRNOG00000069013
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
Ensembl chr16:39,727,789...39,729,234
G
Epg5
ectopic P-granules 5 autophagy tethering factor
acts_upstream_of_or_within
ISO
MGI:5505596 (MGI:5488852|PMID:23479740)
RGD
PMID:23479740
MGI:5488852
NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
G
Epm2a
EPM2A glucan phosphatase, laforin
acts_upstream_of_or_within
ISO
MGI:2182627 (MGI:5607479|PMID:24914213)
RGD
PMID:24914213
MGI:5607479
NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
G
Fnbp1l
formin binding protein 1-like
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:210,647,241...210,748,203
Ensembl chr 2:210,647,246...210,738,455
G
Foxo1
forkhead box O1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
G
Gba1
glucosylceramidase beta 1
involved_in acts_upstream_of_or_within
ISO
(PMID:27378698) (MGI:5501380|PMID:23707074) (MGI:5817293|PMID:27378698)
RGD
PMID:23707074 PMID:27378698
MGI:5501380 MGI:5817293
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
G
Gramd1a
GRAM domain containing 1A
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 1:86,367,001...86,393,348
Ensembl chr 1:86,367,001...86,393,336
G
Hap1
huntingtin-associated protein 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
G
Herc1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
acts_upstream_of
ISO
MGI:3613033 (MGI:4461108|PMID:20041218)
RGD
PMID:20041218
MGI:4461108
NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
G
Hmga1
high mobility group AT-hook 1
acts_upstream_of_or_within
ISO
(MGI:6705789|PMID:32123163)
RGD
PMID:32123163
MGI:6705789
NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752
G
Hmgb1
high mobility group box 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
G
Hmgb1-ps34
high mobility group box 1, pseudogene 34
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr X:71,363,531...71,364,791
Ensembl chr X:71,363,531...71,364,790
G
Hmgb1-ps8
high-mobility group box 1, pseudogene 8
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr16:34,028,487...34,030,715
Ensembl chr16:34,028,446...34,030,648
G
Hmgb1l1
high mobility group box 1 like 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 1:79,815,176...79,816,529
Ensembl chr 1:79,815,269...79,816,511
G
Hmgb1l2
high mobility group box 1 like 2
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr X:107,671,273...107,672,015
Ensembl chr X:107,671,272...107,672,535
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Hmgb1l5
high mobility group box 1 like 5
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:39,768,658...39,769,408
Ensembl chr10:39,768,658...39,769,293
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Inhba
inhibin subunit beta A
IDA
RGD
PMID:27769861
RGD:329853763
NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
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Itgb4
integrin subunit beta 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:24007983)
Ensembl RGD
PMID:24007983
GO_REF:0000107
NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
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Lamp2
lysosomal-associated membrane protein 2
involved_in
ISO
(MGI:3038873|PMID:12221139)
RGD
PMID:12221139
MGI:3038873
NCBI chr X:117,173,097...117,222,090
Ensembl chr X:117,057,606...117,260,522
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LOC100363472
nuclear receptor-binding factor 2-like
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000118 GO_REF:0000033
InterPro TreeGrafter GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr14:8,984,365...8,986,171
Ensembl chr14:8,984,410...8,986,166
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LOC108350839
high mobility group protein B1-like
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 4:91,306,902...91,309,095
Ensembl chr10:100,935,824...100,936,291
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Map1lc3a
microtubule-associated protein 1 light chain 3 alpha
IDA
RGD
PMID:16420522
RGD:1643189
NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
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Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
ISO
(PMID:23629966) (MGI:5490676|PMID:23629966)
RGD
PMID:23629966
MGI:5490676
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
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Naglu
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within
ISO
MGI:1934018 (MGI:5819191|PMID:26147524), (MGI:6219748|PMID:26607664)
RGD
PMID:26147524 PMID:26607664
MGI:5819191 MGI:6219748
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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Nhlrc1
NHL repeat containing E3 ubiquitin protein ligase 1
acts_upstream_of_or_within
ISO
MGI:3808349 (MGI:5607479|PMID:24914213)
RGD
PMID:24914213
MGI:5607479
NCBI chr17:17,674,303...17,677,144
Ensembl chr17:17,674,319...17,677,148
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Npc1
NPC intracellular cholesterol transporter 1
acts_upstream_of_or_within
ISO
UniProtKB:P10636 (PMID:19074461)
RGD
PMID:19074461
NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
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Nrbf2
nuclear receptor binding factor 2
involved_in
ISO IEA IBA
(PMID:24785657) GO_REF:0000118 GO_REF:0000033 GO_REF:0000002 (MGI:5634877|PMID:24849286)
RGD TreeGrafter GO_Central InterPro
PMID:24785657 PMID:24849286
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 MGI:5634877
NCBI chr20:21,308,555...21,326,881
Ensembl chr20:21,308,576...21,326,818
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Nrbf2l1
nuclear receptor binding factor 2 like 1
involved_in
IEA
GO_REF:0000002 GO_REF:0000118
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chr 2:182,253,957...182,256,611
Ensembl chr 2:182,254,732...182,255,595
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Optn
optineurin
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
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Park7
Parkinsonism associated deglycase
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
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Phf23
PHD finger protein 23
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:54,718,663...54,722,784
Ensembl chr10:54,717,724...54,722,782
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Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
acts_upstream_of_or_within
ISO
(PMID:25327288)
RGD
PMID:25327288
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
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Pik3cb
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
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Plekhm1
pleckstrin homology and RUN domain containing M1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:88,313,837...88,366,182
Ensembl chr10:88,314,651...88,362,412
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Pmp22
peripheral myelin protein 22
acts_upstream_of_or_within
ISO
MGI:1856217|MGI:2447704 (MGI:3575390|PMID:14627652), (MGI:3701167|PMID:17174099), (MGI:5605930|PMID:25014022)
RGD
PMID:14627652 PMID:17174099 PMID:25014022
MGI:3575390 MGI:3701167 MGI:5605930
NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
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Prkaa1
protein kinase AMP-activated catalytic subunit alpha 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
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Prkaa2
protein kinase AMP-activated catalytic subunit alpha 2
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
IEA
GO_REF:0000043 GO_REF:0000104
UniProt
GO_REF:0000043 GO_REF:0000104
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:1930934 (MGI:3044229|PMID:15123735)
RGD
PMID:15123735
MGI:3044229
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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Rab12
RAB12, member RAS oncogene family
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
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Rab1a
RAB1A, member RAS oncogene family
involved_in
ISO ISS
(PMID:22939626) GO_REF:0000024
RGD UniProt
PMID:22939626
GO_REF:0000024
NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
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Rab7a
RAB7A, member RAS oncogene family
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
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Rab8a
RAB8A, member RAS oncogene family
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
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Rb1cc1
RB1-inducible coiled-coil 1
acts_upstream_of_or_within involved_in
ISO
MGI:2176173|MGI:3526069 (MGI:6323456|PMID:31006538) (MGI:3796758|PMID:18443221)
RGD
PMID:18443221 PMID:31006538
MGI:3796758 MGI:6323456
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
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Retreg1
reticulophagy regulator 1
acts_upstream_of_or_within
ISO
(MGI:6370289|PMID:31446166)
RGD
PMID:31446166
MGI:6370289
NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
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RGD1359108
similar to RIKEN cDNA 3110043O21
involved_in
ISO IEA IBA ISS
(PMID:24549040) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD TreeGrafter GO_Central Ensembl UniProt
PMID:24549040
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
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Rnf166
ring finger protein 166
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr19:50,529,434...50,539,274
Ensembl chr19:50,529,434...50,539,274
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Rnf185
ring finger protein 185
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864
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Rubcn
rubicon autophagy regulator
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
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S100a8
S100 calcium binding protein A8
involved_in
ISS ISO
GO_REF:0000024 (PMID:19935772)
UniProt RGD
PMID:19935772
GO_REF:0000024
NCBI chr 2:176,166,517...176,167,645
Ensembl chr 2:176,167,124...176,167,643
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S100a9
S100 calcium binding protein A9
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:19935772)
Ensembl UniProt RGD
PMID:19935772
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230
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Sec16a
SEC16 homolog A, endoplasmic reticulum export factor
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273
G
Sec16b
SEC16 homolog B, endoplasmic reticulum export factor
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr13:69,665,757...69,727,199
Ensembl chr13:69,684,291...69,727,196
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Sirt2
sirtuin 2
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
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Smcr8
SMCR8-C9orf72 complex subunit
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
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Sqstm1
sequestosome 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4819475|PMID:20421418), (MGI:5009358|PMID:20173742) (PMID:17580304), (PMID:20452972)
UniProt RGD
PMID:17580304 PMID:20173742 PMID:20421418 PMID:20452972
GO_REF:0000024 MGI:4819475 MGI:5009358
NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
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Srpx
sushi-repeat-containing protein, X-linked
acts_upstream_of_or_within
ISO
MGI:3706175 (MGI:3852261|PMID:19368996)
RGD
PMID:19368996
MGI:3852261
NCBI chr X:12,676,984...12,751,296
Ensembl chr X:12,566,645...12,747,882
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Stk11
serine/threonine kinase 11
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
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Syt11
synaptotagmin 11
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5881999|PMID:27278822) (PMID:27278822)
UniProt Ensembl RGD
PMID:27278822
GO_REF:0000024 GO_REF:0000107 MGI:5881999
NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
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Tbc1d5
TBC1 domain family, member 5
involved_in
ISO
(PMID:22354992)
RGD
PMID:22354992
NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913
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Tcirg1
T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3
acts_upstream_of_or_within
ISO
(MGI:6296816|PMID:23908015)
RGD
PMID:23908015
MGI:6296816
NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
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Tecpr1
tectonin beta-propeller repeat containing 1
involved_in
ISO ISS
(PMID:21575909) GO_REF:0000024
RGD UniProt
PMID:21575909
GO_REF:0000024
NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
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Tgfbrap1
transforming growth factor, beta receptor associated protein 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:45,320,975...45,371,329
Ensembl chr 9:45,320,930...45,371,311
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Tm9sf1
transmembrane 9 superfamily member 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr15:29,127,585...29,135,334
Ensembl chr15:29,127,584...29,135,349
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Tmbim6
transmembrane BAX inhibitor motif containing 6
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 7:130,527,313...130,542,567
Ensembl chr 7:130,527,316...130,543,633
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Tmem39a
transmembrane protein 39a
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
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Tollip
toll interacting protein
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 1:196,961,585...196,984,252
Ensembl chr 1:196,950,771...196,983,625
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Tp53
tumor protein p53
involved_in
ISO
(PMID:23629966)
RGD
PMID:23629966
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Trappc4
trafficking protein particle complex subunit 4
involved_in
ISO IEA ISS
(PMID:31794024) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:31794024
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:44,729,458...44,733,285
Ensembl chr 8:44,725,331...44,733,491
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Trim17
tripartite motif-containing 17
involved_in
ISO
(PMID:25127057)
RGD
PMID:25127057
NCBI chr10:43,743,111...43,750,929
Ensembl chr10:43,740,604...43,750,919
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Trim5
tripartite motif-containing 5
involved_in
ISO
(PMID:25127057)
RGD
PMID:25127057
NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
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Ulk1
unc-51 like autophagy activating kinase 1
involved_in
ISO
(MGI:3796758|PMID:18443221), (MGI:5285135|PMID:21258367) UniProtKB:Q8IYT8 (PMID:17595159), (PMID:18936157), (PMID:25891078), (PMID:28389568)
RGD
PMID:17595159 PMID:18443221 PMID:18936157 PMID:21258367 PMID:25891078 PMID:28389568 More...
MGI:3796758 MGI:5285135
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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Ulk2
unc-51 like autophagy activating kinase 2
involved_in
ISO
(MGI:3796758|PMID:18443221) UniProtKB:O75385 (PMID:18936157), (PMID:28389568)
RGD
PMID:18443221 PMID:18936157 PMID:28389568
MGI:3796758
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
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Umod
uromodulin
acts_upstream_of_or_within
ISO
(MGI:6107740|PMID:28990932)
RGD
PMID:28990932
MGI:6107740
NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302
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Usp10
ubiquitin specific peptidase 10
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897
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Uvrag
UV radiation resistance associated
involved_in
ISO
(PMID:24056303)
RGD
PMID:24056303
NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
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Vamp8
vesicle-associated membrane protein 8
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
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Vcp
valosin-containing protein
involved_in
ISO ISS
(PMID:20104022), (PMID:25125609) GO_REF:0000024
RGD UniProt
PMID:20104022 PMID:25125609
GO_REF:0000024
NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
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Vmp1
vacuole membrane protein 1
involved_in
ISO IBA IEA IDA
(PMID:28890335) GO_REF:0000033 GO_REF:0000118 (MGI:3768504|PMID:17940279)
RGD GO_Central TreeGrafter
PMID:17940279 PMID:28890335 PMID:17940279
GO_REF:0000033 GO_REF:0000118 MGI:3768504 , RGD:8554414
NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
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Vps11
VPS11 core subunit of CORVET and HOPS complexes
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 8:44,684,129...44,698,568
Ensembl chr 8:44,684,127...44,698,568
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Vps13a
vacuolar protein sorting 13 homolog A
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:25996471) GO_REF:0000033
RGD GO_Central
PMID:25996471
GO_REF:0000033
NCBI chr 1:213,901,999...214,128,638
Ensembl chr 1:213,901,999...214,128,555
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Vps39
VPS39 subunit of HOPS complex
involved_in
ISO IBA
(PMID:24554770) GO_REF:0000033
RGD GO_Central
PMID:24554770
GO_REF:0000033
NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
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Vps51
VPS51 subunit of GARP complex
involved_in
ISO
(PMID:20685960)
RGD
PMID:20685960
NCBI chr 1:203,360,434...203,370,422
Ensembl chr 1:203,360,440...203,370,430
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Vti1a
vesicle transport through interaction with t-SNAREs 1A
involved_in
ISO
(PMID:24095276)
RGD
PMID:24095276
NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
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Wdr45
WD repeat domain 45
involved_in
ISS ISO
GO_REF:0000024 (PMID:23435086)
UniProt RGD
PMID:23435086
GO_REF:0000024
NCBI chr X:14,776,280...14,782,202
Ensembl chr X:14,776,293...14,782,202
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Wdr47
WD repeat domain 47
acts_upstream_of_or_within
ISO
MGI:4433065 (MGI:6095492|PMID:29078390)
RGD
PMID:29078390
MGI:6095492
NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
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Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
ISO
(PMID:15602573), (PMID:17618624)
RGD
PMID:15602573 PMID:17618624
NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
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Capn10
calpain 10
IMP
RGD
PMID:22568896
RGD:7247732
NCBI chr 9:93,498,132...93,510,494
Ensembl chr 9:93,498,478...93,510,494
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Ppargc1a
PPARG coactivator 1 alpha
IEP
RGD
PMID:19783904
RGD:10059673
NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
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Atg5
autophagy related 5
involved_in
IMP
PMID:23434281
ARUK-UCL
PMID:23434281
RGD:12793031
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Atg7
autophagy related 7
involved_in
IMP
PMID:23434281
ARUK-UCL
PMID:23434281
RGD:12793031
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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Hsp90aa1
heat shock protein 90 alpha family class A member 1
involved_in
NAS
PMID:18644871
ParkinsonsUK-UCL
PMID:18644871
RGD:10412301
NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
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Hsp90ab1
heat shock protein 90 alpha family class B member 1
involved_in
NAS
PMID:18644871
ParkinsonsUK-UCL
PMID:18644871
RGD:10412301
NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
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Hspa8
heat shock protein family A (Hsp70) member 8
involved_in acts_upstream_of_or_within
IDA IGI
PMID:18644871
ParkinsonsUK-UCL MGI
PMID:18644871 PMID:18644871
RGD:10412301 , RGD:10412301
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
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Lamp2
lysosomal-associated membrane protein 2
involved_in acts_upstream_of_or_within
IDA ISO
PMID:11082038 (PMID:36586411) UniProtKB:P13473 (MGI:3813410|PMID:18644871), (MGI:5805578|PMID:27628032) (MGI:3813419|PMID:18579532) (PMID:24880125), (PMID:27628032) (PMID:8662539)
RGD
PMID:8662539 PMID:18579532 PMID:18644871 PMID:24880125 PMID:27628032 PMID:36586411 PMID:11082038 More...
MGI:3813410 MGI:3813419 MGI:5805578 , RGD:1581607
NCBI chr X:117,173,097...117,222,090
Ensembl chr X:117,057,606...117,260,522
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Synpo2
synaptopodin 2
involved_in
IMP
PMID:23434281
ARUK-UCL
PMID:23434281
RGD:12793031
NCBI chr 2:211,217,099...211,371,267
Ensembl chr 2:211,216,783...211,371,267
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Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:22020285)
RGD
PMID:22020285
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
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Atg12
autophagy related 12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
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Atg2a
autophagy related 2A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
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Atg2b
autophagy related 2B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
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Atg3
autophagy related 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:55,624,914...55,653,249
Ensembl chr11:55,624,917...55,653,224
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Gaa
alpha glucosidase
involved_in
ISO IEA
MGI:2148550 (MGI:2655991|PMID:12739885) GO_REF:0000107
RGD Ensembl
PMID:12739885
GO_REF:0000107 MGI:2655991
NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
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Gabarapl1
GABA type A receptor associated protein like 1
involved_in
ISO
(MGI:7261139|PMID:20810658)
RGD
PMID:20810658
MGI:7261139
NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
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Rb1cc1
RB1-inducible coiled-coil 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
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Stbd1
starch binding domain 1
involved_in
ISO ISS
(PMID:20810658) (MGI:7261139|PMID:20810658) GO_REF:0000024
RGD GO_Central
PMID:20810658
GO_REF:0000024 MGI:7261139
NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443
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Wdr45
WD repeat domain 45
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:14,776,280...14,782,202
Ensembl chr X:14,776,293...14,782,202
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Wdr45b
WD repeat domain 45B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
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Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
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Wipi2
WD repeat domain, phosphoinositide interacting 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
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Haus8l2
HAUS augmin-like complex, subunit 8 like 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
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Hsc70-ps1
heat shock cognate protein 70, pseudogene 1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 2:164,044,226...164,046,344
Ensembl chr 2:164,044,261...164,046,336
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Hspa8
heat shock protein family A (Hsp70) member 8
involved_in
ISO IEA
(MGI:5700294|PMID:21238931) GO_REF:0000118 GO_REF:0000107
RGD TreeGrafter Ensembl
PMID:21238931
GO_REF:0000107 GO_REF:0000118 MGI:5700294
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
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Hspa8-ps23
heat shock protein family A (Hsp70) member 8, pseudogene 23
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr X:32,535,167...32,537,203
Ensembl chr X:32,535,155...32,537,257
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Vps4a
vacuolar protein sorting 4 homolog A
involved_in
IEA ISO
GO_REF:0000107 (MGI:5700294|PMID:21238931)
Ensembl RGD
PMID:21238931
GO_REF:0000107 MGI:5700294
NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887
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Vps4b
vacuolar protein sorting 4 homolog B
involved_in
ISO
(MGI:5700294|PMID:21238931)
RGD
PMID:21238931
MGI:5700294
NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229
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Aup1
AUP1, lipid droplet regulating VLDL assembly factor
involved_in
ISO IEA
(PMID:29902443) GO_REF:0000107
RGD Ensembl
PMID:29902443
GO_REF:0000107
NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346
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Rab7a
RAB7A, member RAS oncogene family
involved_in
ISO ISS
(MGI:5689086|PMID:23708524) GO_REF:0000024
RGD GO_Central
PMID:23708524
GO_REF:0000024 MGI:5689086
NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
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Atg10
autophagy related 10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:22,109,304...22,398,313
Ensembl chr 2:22,108,426...22,398,233
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Atg12
autophagy related 12
involved_in
ISO
(PMID:25484072) (MGI:2137756|PMID:11266458)
RGD
PMID:11266458 PMID:25484072
MGI:2137756
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
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Atg14
autophagy related 14
involved_in
ISO
(PMID:23878393)
RGD
PMID:23878393
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
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Atg16l1
autophagy related 16-like 1
involved_in
ISO
(PMID:29317426), (PMID:33586810) (MGI:2137756|PMID:11266458)
RGD
PMID:11266458 PMID:29317426 PMID:33586810
MGI:2137756
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
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Atg16l2
autophagy related 16-like 2
involved_in
ISO
(MGI:2137756|PMID:11266458)
RGD
PMID:11266458
MGI:2137756
NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
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Atg3
autophagy related 3
acts_upstream_of_or_within
ISO
(MGI:5562485|PMID:24035364)
RGD
PMID:24035364
MGI:5562485
NCBI chr11:55,624,914...55,653,249
Ensembl chr11:55,624,917...55,653,224
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Atg5
autophagy related 5
acts_upstream_of_or_within involved_in
ISO
MGI:3612279 (MGI:4457987|PMID:20453062), (MGI:5494529|PMID:22496425), (MGI:5500861|PMID:23704209), (MGI:5562485|PMID:24035364) (MGI:2137756|PMID:11266458) (PMID:25484072)
RGD
PMID:11266458 PMID:20453062 PMID:22496425 PMID:23704209 PMID:24035364 PMID:25484072 More...
MGI:2137756 MGI:4457987 MGI:5494529 MGI:5500861 MGI:5562485
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Atg7
autophagy related 7
involved_in acts_upstream_of_or_within
ISO
(PMID:22354037) MGI:1934631|MGI:3587769 (MGI:5494529|PMID:22496425), (MGI:5500861|PMID:23704209), (MGI:5562485|PMID:24035364)
RGD
PMID:22354037 PMID:22496425 PMID:23704209 PMID:24035364
MGI:5494529 MGI:5500861 MGI:5562485
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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Becn1
beclin 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (MGI:5619439|PMID:23332761) MGI:1097712|MGI:2683833 (MGI:2682527|PMID:14657337), (MGI:3723543|PMID:17468177)
UniProt RGD
PMID:14657337 PMID:17468177 PMID:23332761
GO_REF:0000024 MGI:2682527 MGI:3723543 MGI:5619439
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
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Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
acts_upstream_of_or_within
ISO
MGI:2388888 (MGI:3690270|PMID:16714284)
RGD
PMID:16714284
MGI:3690270
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
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Ei24
EI24, autophagy associated transmembrane protein
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571
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ENSRNOG00000067694
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr20:828,448...830,087
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ENSRNOG00000067909
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr 1:64,012,849...64,013,910
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Hdac10
histone deacetylase 10
involved_in
ISO IEA ISS
(PMID:23801752) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:23801752
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228
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Hmox1
heme oxygenase 1
acts_upstream_of involved_in
ISO IEA
MGI:2429784 (MGI:5430482|PMID:20705711) GO_REF:0000107
RGD Ensembl
PMID:20705711
GO_REF:0000107 MGI:5430482
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
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Ilrun
inflammation and lipid regulator with UBA-like and NBR1-like domains
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:5,809,931...5,876,197
Ensembl chr20:5,809,936...5,876,012
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Map1lc3a
microtubule-associated protein 1 light chain 3 alpha
involved_in
ISO
(PMID:28223137)
RGD
PMID:28223137
NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
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Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
ISO
(PMID:28223137)
RGD
PMID:28223137
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
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Mtor
mechanistic target of rapamycin kinase
acts_upstream_of involved_in
ISO IEA
(MGI:3690270|PMID:16714284) GO_REF:0000107
RGD Ensembl
PMID:16714284
GO_REF:0000107 MGI:3690270
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Myo5a
myosin VA
IMP
RGD
PMID:29217155
RGD:42721980
NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
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Nbr1
NBR1, autophagy cargo receptor
involved_in
ISO IBA IEA ISS
(PMID:19250911) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 GO_REF:0000024
RGD GO_Central TreeGrafter Ensembl UniProt
PMID:19250911
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr10:86,477,775...86,506,418
Ensembl chr10:86,478,290...86,506,412
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Npc1
NPC intracellular cholesterol transporter 1
acts_upstream_of
ISO
MGI:1857409|MGI:1891828 (MGI:3723543|PMID:17468177)
RGD
PMID:17468177
MGI:3723543
NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
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Pdcd6ip
programmed cell death 6 interacting protein
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5914142|PMID:25686249) GO_REF:0000107
UniProt RGD Ensembl
PMID:25686249
GO_REF:0000024 GO_REF:0000107 MGI:5914142
NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773
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Pik3c2a
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
acts_upstream_of_or_within
ISO
MGI:2685054 (MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
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Pik3c2b
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
acts_upstream_of_or_within
ISO
MGI:1203729 (MGI:5565574|PMID:24098492)
RGD
PMID:24098492
MGI:5565574
NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612
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Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5619439|PMID:23332761), (MGI:5630037|PMID:25578879)
UniProt RGD
PMID:23332761 PMID:25578879
GO_REF:0000024 MGI:5619439 MGI:5630037
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
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Pik3r4
phosphoinositide-3-kinase, regulatory subunit 4
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000118 GO_REF:0000033
InterPro TreeGrafter GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
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Pim2
Pim-2 proto-oncogene, serine/threonine kinase
acts_upstream_of
ISO
(MGI:4361989|PMID:17476689)
RGD
PMID:17476689
MGI:4361989
NCBI chr X:14,617,582...14,622,851
Ensembl chr X:14,617,582...14,622,851
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Plaa
phospholipase A2, activating protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:27753622)
UniProt RGD
PMID:27753622
GO_REF:0000024
NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
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Postn
periostin
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
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Rab2a
RAB2A, member RAS oncogene family
involved_in
IEA ISO
GO_REF:0000107 (MGI:7581103|PMID:28063257) (PMID:28483915)
Ensembl RGD
PMID:28063257 PMID:28483915
GO_REF:0000107 MGI:7581103
NCBI chr 5:21,676,017...21,740,035
Ensembl chr 5:21,676,129...21,739,899
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Rab2b
RAB2B, member RAS oncogene family
involved_in
IEA ISO
GO_REF:0000107 (MGI:7581103|PMID:28063257)
Ensembl RGD
PMID:28063257
GO_REF:0000107 MGI:7581103
NCBI chr15:24,968,364...24,988,990
Ensembl chr15:24,968,803...24,989,113
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Sqstm1
sequestosome 1
involved_in
ISO ISS
(PMID:20168092) GO_REF:0000024
RGD UniProt
PMID:20168092
GO_REF:0000024
NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
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Tbc1d5
TBC1 domain family, member 5
involved_in
ISO
(PMID:24603492)
RGD
PMID:24603492
NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913
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Tcirg1
T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3
acts_upstream_of_or_within
ISO
MGI:1856973 (MGI:5500861|PMID:23704209)
RGD
PMID:23704209
MGI:5500861
NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
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Tecpr1
tectonin beta-propeller repeat containing 1
involved_in
ISO
(PMID:25484072)
RGD
PMID:25484072
NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
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Tmem74
transmembrane protein 74
involved_in
ISO
(PMID:18294959)
RGD
PMID:18294959
NCBI chr 7:74,929,290...74,937,929
Ensembl chr 7:74,931,694...74,937,934
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Tp53inp2
tumor protein p53 inducible nuclear protein 2
acts_upstream_of_or_within
ISO
MGI:1931135|MGI:5637673 (MGI:5582129|PMID:24713655)
RGD
PMID:24713655
MGI:5582129
NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
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Ubqln1
ubiquilin 1
involved_in
ISO
(PMID:20529957)
RGD
PMID:20529957
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
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Ubxn6
UBX domain protein 6
involved_in
ISO
(PMID:27753622)
RGD
PMID:27753622
NCBI chr 9:900,883...906,047
Ensembl chr 9:900,884...906,124
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Ulk1
unc-51 like autophagy activating kinase 1
involved_in acts_upstream_of_or_within
ISO
(PMID:22354037) UniProtKB:O70405 (MGI:5607224|PMID:21855797) (MGI:5285135|PMID:21258367)
RGD
PMID:21258367 PMID:21855797 PMID:22354037
MGI:5285135 MGI:5607224
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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Vcp
valosin-containing protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:27753622)
UniProt RGD
PMID:27753622
GO_REF:0000024
NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
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Vps41
VPS41 subunit of HOPS complex
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:46,063,132...46,227,533
Ensembl chr17:46,063,124...46,227,791
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Vti1a
vesicle transport through interaction with t-SNAREs 1A
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
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Vti1b
vesicle transport through interaction with t-SNAREs 1B
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
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Yod1
YOD1 deubiquitinase
involved_in
ISS ISO
GO_REF:0000024 (PMID:27753622)
UniProt RGD
PMID:27753622
GO_REF:0000024
NCBI chr13:42,175,047...42,181,661
Ensembl chr13:42,174,820...42,177,205
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Zfyve1
zinc finger FYVE-type containing 1
involved_in
ISO
(PMID:25578879)
RGD
PMID:25578879
NCBI chr 6:103,184,938...103,234,111
Ensembl chr 6:103,184,938...103,234,039
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Atg16l1
autophagy related 16-like 1
involved_in
ISO
(PMID:29317426), (PMID:33586810) (MGI:6709815|PMID:33586810)
RGD
PMID:29317426 PMID:33586810
MGI:6709815
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
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Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO IEA
(PMID:33909989) GO_REF:0000107
RGD Ensembl
PMID:33909989
GO_REF:0000107
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
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Zfp418
zinc finger protein 418
involved_in
ISS ISO IMP
GO_REF:0000024 (MGI:6789914|PMID:33249983)
UniProt RGD
PMID:33249983 PMID:33249983
GO_REF:0000024 MGI:6789914 , RGD:329955556
NCBI chr 1:66,581,406...66,594,247
Ensembl chr 1:66,581,287...66,594,242
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Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO IBA
UniProtKB:O60260|UniProtKB:Q99MQ3 (PMID:21753002), (PMID:25215947) GO_REF:0000033
RGD GO_Central
PMID:21753002 PMID:25215947
GO_REF:0000033
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
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Arfip2
ADP-ribosylation factor interacting protein 2
involved_in
ISO ISS
(PMID:33773106) GO_REF:0000024
RGD UniProt
PMID:33773106
GO_REF:0000024
NCBI chr 1:159,974,255...159,980,398
Ensembl chr 1:159,974,201...159,980,336
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Atg13
autophagy related 13
involved_in
ISO IBA
(MGI:5607224|PMID:21855797) GO_REF:0000033
RGD GO_Central
PMID:21855797
GO_REF:0000033 MGI:5607224
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
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Atg14
autophagy related 14
involved_in
ISO IBA
(PMID:23878393) GO_REF:0000033
RGD GO_Central
PMID:23878393
GO_REF:0000033
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
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Atg4a
autophagy related 4A, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:104,665,345...104,765,271
Ensembl chr X:104,665,345...104,765,268
G
Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO IBA IEA
(PMID:33773106) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:33773106
GO_REF:0000033 GO_REF:0000107
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
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Atg4c
autophagy related 4C, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:113,867,218...113,935,534
Ensembl chr 5:113,867,092...113,934,830
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Atg4d
autophagy related 4D, cysteine peptidase
involved_in
ISO IBA
(PMID:33773106) GO_REF:0000033
RGD GO_Central
PMID:33773106
GO_REF:0000033
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
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Atg5
autophagy related 5
involved_in
IEA ISO
GO_REF:0000107 (MGI:3796473|PMID:18281291)
Ensembl RGD
PMID:18281291
GO_REF:0000107 MGI:3796473
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Atg7
autophagy related 7
involved_in
IEA ISO
GO_REF:0000107 (MGI:4420830|PMID:20080761) UniProtKB:Q9BXM7 (PMID:19279012)
Ensembl RGD
PMID:19279012 PMID:20080761
GO_REF:0000107 MGI:4420830
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
Becn1
beclin 1
involved_in
ISO IBA
(PMID:23878393), (PMID:25215947) GO_REF:0000033 (MGI:3796473|PMID:18281291)
RGD GO_Central
PMID:18281291 PMID:23878393 PMID:25215947
GO_REF:0000033 MGI:3796473
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Becn2
beclin 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:87,842,980...87,892,410
Ensembl chr13:87,844,531...87,845,787
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Ctsk
cathepsin K
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr 2:183,058,586...183,069,551
Ensembl chr 2:183,058,569...183,069,550
G
Fundc1
FUN14 domain containing 1
involved_in
ISO
UniProtKB:P09936 (PMID:34244144)
RGD
PMID:34244144
NCBI chr X:5,083,635...5,100,293
Ensembl chr X:5,083,617...5,100,284
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Gba1
glucosylceramidase beta 1
acts_upstream_of_or_within
ISO
(MGI:5501380|PMID:23707074)
RGD
PMID:23707074
MGI:5501380
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
G
Lrba
LPS responsive beige-like anchor protein
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 2:171,623,668...172,202,576
Ensembl chr 2:171,621,507...172,202,724
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Map1lc3b
microtubule-associated protein 1 light chain 3 beta
involved_in
ISS ISO
GO_REF:0000024 UniProtKB:Q9BXM7 (PMID:19279012), (PMID:28017329)
UniProt RGD
PMID:19279012 PMID:28017329
GO_REF:0000024
NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
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Ogt
O-linked N-acetylglucosamine (GlcNAc) transferase
involved_in
ISO IEA
(MGI:6694822|PMID:33406421) GO_REF:0000107
RGD Ensembl
PMID:33406421
GO_REF:0000107 MGI:6694822
NCBI chr X:66,771,278...66,816,148
Ensembl chr X:66,771,349...66,816,146
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Phb2
prohibitin 2
involved_in
ISO IEA ISS
(PMID:28017329) GO_REF:0000107 (MGI:6436385|PMID:28017329) GO_REF:0000024
RGD Ensembl UniProt
PMID:28017329
GO_REF:0000024 GO_REF:0000107 MGI:6436385
NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
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Pink1
PTEN induced kinase 1
involved_in
ISO
UniProtKB:Q8CGY8 (PMID:33406421)
RGD
PMID:33406421
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in acts_upstream_of_or_within
ISO IDA IEA
(PMID:28017329) PMID:20457763 GO_REF:0000107 MGI:1921624 (MGI:5603233|PMID:24949970)
RGD Ensembl
PMID:24949970 PMID:28017329 PMID:20457763
GO_REF:0000107 MGI:5603233 , RGD:10047224
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Retreg1
reticulophagy regulator 1
acts_upstream_of_or_within
ISO
(MGI:6370289|PMID:31446166)
RGD
PMID:31446166
MGI:6370289
NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
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Rimoc1
RAB7A interacting MON1-CCZ1 complex subunit 1
involved_in
ISO
(PMID:34432599)
RGD
PMID:34432599
NCBI chr 2:53,189,787...53,203,981
Ensembl chr 2:53,189,790...53,203,821
G
Spata33
spermatogenesis associated 33
involved_in
ISO
(MGI:6763857|PMID:33087875)
RGD
PMID:33087875
MGI:6763857
NCBI chr19:51,246,514...51,258,894
Ensembl chr19:51,246,514...51,258,894
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Sqstm1
sequestosome 1
involved_in
ISO IBA IEA
UniProtKB:Q9JK66 (PMID:20457763) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:20457763
GO_REF:0000033 GO_REF:0000118
NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
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Tafazzin
tafazzin, phospholipid-lysophospholipid transacylase
involved_in
ISO
(PMID:33096711) (MGI:6450300|PMID:25919711)
RGD
PMID:25919711 PMID:33096711
MGI:6450300
NCBI chr X:152,065,539...152,076,178
Ensembl chr X:152,065,609...152,074,001
G
Tigar
TP53 induced glycolysis regulatory phosphatase
acts_upstream_of
ISO
MGI:5319187 (MGI:5319065|PMID:22044588)
RGD
PMID:22044588
MGI:5319065
NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029
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Tp53
tumor protein p53
acts_upstream_of involved_in
ISO IEA
MGI:1857263 (MGI:5319065|PMID:22044588) GO_REF:0000107
RGD Ensembl
PMID:22044588
GO_REF:0000107 MGI:5319065
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Ulk1
unc-51 like autophagy activating kinase 1
involved_in
ISO
(MGI:5607224|PMID:21855797)
RGD
PMID:21855797
MGI:5607224
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Spata18
spermatogenesis associated 18
involved_in
ISO IBA IEA ISS
(PMID:21264228) GO_REF:0000033 GO_REF:0000118 GO_REF:0000024 GO_REF:0000107
RGD GO_Central TreeGrafter UniProt Ensembl
PMID:21264228
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr14:34,531,931...34,558,671
Ensembl chr14:34,531,061...34,558,687
G
Hdac6
histone deacetylase 6
involved_in
IEA ISO
GO_REF:0000107 (PMID:31857589)
Ensembl RGD
PMID:31857589
GO_REF:0000107
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Lypla1
lysophospholipase 1
involved_in
ISO
(PMID:37802024)
RGD
PMID:37802024
NCBI chr 5:14,679,605...14,708,774
Ensembl chr 5:14,679,606...14,708,746
G
Becn1
beclin 1
acts_upstream_of_or_within
ISO
MGI:2683833 (MGI:5888970|PMID:27994061)
RGD
PMID:27994061
MGI:5888970
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Ehmt2
euchromatic histone lysine methyltransferase 2
acts_upstream_of_or_within
ISO
(MGI:5543871|PMID:23918802)
RGD
PMID:23918802
MGI:5543871
NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
G
Fez1
fasciculation and elongation protein zeta 1
involved_in
ISO ISS
(PMID:25495476) GO_REF:0000024
RGD GO_Central
PMID:25495476
GO_REF:0000024
NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683
G
Fez2
fasciculation and elongation protein zeta 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:25495476)
GO_Central Ensembl RGD
PMID:25495476
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:16,654,572...16,694,628
Ensembl chr 6:16,654,614...16,694,626
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO
(PMID:23916833)
RGD
PMID:23916833
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Mtm1
myotubularin 1
acts_upstream_of_or_within involved_in
ISO IBA IEA
MGI:2450997 (MGI:5510937|PMID:23695157) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:23695157
GO_REF:0000033 GO_REF:0000118 MGI:5510937
NCBI chr 6:488,923...506,882
Ensembl chr 6:488,969...506,860
G
Nupr1
nuclear protein 1, transcriptional regulator
involved_in
ISS ISO
GO_REF:0000024 (PMID:20181828)
UniProt RGD
PMID:20181828
GO_REF:0000024
NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
G
Phf23
PHD finger protein 23
involved_in
ISO IBA IEA ISS
(PMID:25484098) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 GO_REF:0000024
RGD GO_Central TreeGrafter Ensembl
PMID:25484098
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr10:54,718,663...54,722,784
Ensembl chr10:54,717,724...54,722,782
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:19279012)
RGD
PMID:19279012
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Scfd1
sec1 family domain containing 1
involved_in
ISO
(PMID:21242315)
RGD
PMID:21242315
NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078
G
Sec22b
SEC22 homolog B, vesicle trafficking protein
involved_in
ISO
(PMID:21242315)
RGD
PMID:21242315
NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026
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Smcr8
SMCR8-C9orf72 complex subunit
involved_in
ISO
(PMID:28195531)
RGD
PMID:28195531
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
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Tmem39a
transmembrane protein 39a
involved_in
ISO IBA ISS
(PMID:31806350) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:31806350
GO_REF:0000024 GO_REF:0000033
NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
G
Clec16a
C-type lectin domain containing 16A
involved_in
ISO
(PMID:28223137)
RGD
PMID:28223137
NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
Phf23
PHD finger protein 23
involved_in
ISO IEA IBA ISS
(PMID:25484098) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD TreeGrafter GO_Central Ensembl
PMID:25484098
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr10:54,718,663...54,722,784
Ensembl chr10:54,717,724...54,722,782
G
Rubcn
rubicon autophagy regulator
involved_in
ISO IBA
(PMID:21062745) GO_REF:0000033
RGD GO_Central
PMID:21062745
GO_REF:0000033
NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
G
Tmem39a
transmembrane protein 39a
involved_in
ISO IBA ISS
(PMID:31806350) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:31806350
GO_REF:0000024 GO_REF:0000033
NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
G
Ubqln4
ubiquilin 4
involved_in
ISO
(PMID:23459205)
RGD
PMID:23459205
NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059
G
Adra1a
adrenoceptor alpha 1A
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5888970|PMID:27994061) GO_REF:0000107
RGD Ensembl
PMID:27994061
GO_REF:0000107 MGI:5888970
NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500
G
Akt1
AKT serine/threonine kinase 1
involved_in
ISO IEA
(PMID:18387192) GO_REF:0000107
RGD Ensembl
PMID:18387192
GO_REF:0000107
NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
G
Bcl2
BCL2, apoptosis regulator
involved_in
ISO IEA ISS
(MGI:3796473|PMID:18281291) GO_REF:0000107 GO_REF:0000024 (PMID:21358617)
RGD Ensembl UniProt
PMID:18281291 PMID:21358617
GO_REF:0000024 GO_REF:0000107 MGI:3796473
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Becn1
beclin 1
acts_upstream_of_or_within
ISO
(MGI:5888970|PMID:27994061)
RGD
PMID:27994061
MGI:5888970
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Bmf
Bcl2 modifying factor
involved_in
ISO IEA IBA
(PMID:23629966) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107 (MGI:5490676|PMID:23629966)
RGD TreeGrafter GO_Central Ensembl
PMID:23629966
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5490676
NCBI chr 3:105,499,534...105,520,159
Ensembl chr 3:105,499,538...105,520,145
G
Cptp
ceramide-1-phosphate transfer protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:29164996)
UniProt RGD
PMID:29164996
GO_REF:0000024
NCBI chr 5:166,474,947...166,479,103
Ensembl chr 5:166,474,966...166,479,017
G
Dap
death-associated protein
involved_in
ISO IEA IBA
(PMID:20537536) GO_REF:0000118 GO_REF:0000033
RGD TreeGrafter GO_Central
PMID:20537536
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752
G
Dapl1
death associated protein-like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:43,960,993...43,980,940
Ensembl chr 3:43,960,810...43,980,940
G
Eif4e
eukaryotic translation initiation factor 4E
NOT|involved_in
ISO
(PMID:18426977)
RGD
PMID:18426977
NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
G
Eif4g1
eukaryotic translation initiation factor 4 gamma 1
involved_in
ISO
(PMID:18426977)
RGD
PMID:18426977
NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
G
Eif4g2
eukaryotic translation initiation factor 4, gamma 2
involved_in
ISO
(PMID:18426977)
RGD
PMID:18426977
NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
G
Eif4g3
eukaryotic translation initiation factor 4 gamma, 3
NOT|involved_in
ISO
(PMID:18426977)
RGD
PMID:18426977
NCBI chr 5:150,197,410...150,418,862
Ensembl chr 5:150,195,226...150,418,363
G
ENSRNOG00000063234
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr15:17,205,053...17,206,176
G
Ep300
E1A binding protein p300
involved_in
ISO
(PMID:32561715)
RGD
PMID:32561715
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Erfe
erythroferrone
involved_in
ISS ISO
GO_REF:0000024 (MGI:5554964|PMID:24187137)
UniProt RGD
PMID:24187137
GO_REF:0000024 MGI:5554964
NCBI chr 9:91,956,971...91,964,846
Ensembl chr 9:91,956,977...91,964,846
G
Foxk1
forkhead box K1
involved_in
ISO
(PMID:25402684)
RGD
PMID:25402684
NCBI chr12:12,110,119...12,175,089
Ensembl chr12:12,115,950...12,175,089
G
Foxk2
forkhead box K2
involved_in
ISO
(MGI:5615527|PMID:25402684)
RGD
PMID:25402684
MGI:5615527
NCBI chr10:106,542,643...106,592,569
Ensembl chr10:106,542,566...106,592,563
G
Gata4
GATA binding protein 4
IMP
RGD
PMID:19901028
RGD:5131537
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
G
Golga2
golgin A2
involved_in
ISO
(PMID:22735382)
RGD
PMID:22735382
NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
G
Herc1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
acts_upstream_of_or_within
ISO
MGI:3613033 (MGI:4461108|PMID:20041218)
RGD
PMID:20041218
MGI:4461108
NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
G
Il10
interleukin 10
involved_in
ISO
(PMID:26962683)
RGD
PMID:26962683
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
G
Il10ra
interleukin 10 receptor subunit alpha
involved_in
ISO
(PMID:26962683)
RGD
PMID:26962683
NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061
G
Il3
interleukin 3
acts_upstream_of_or_within
ISO
(MGI:3575206|PMID:15680329)
RGD
PMID:15680329
MGI:3575206
NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066
G
Kdm4a
lysine demethylase 4A
involved_in
ISO
(PMID:25660547)
RGD
PMID:25660547
NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
G
Klhl22
kelch-like family member 22
involved_in
ISS ISO
GO_REF:0000024 (PMID:29769719)
UniProt RGD
PMID:29769719
GO_REF:0000024
NCBI chr11:83,190,891...83,231,746
Ensembl chr11:83,190,891...83,231,770
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Lep
leptin
involved_in
ISO ISS
(PMID:25060689) (MGI:5705211|PMID:25060689) GO_REF:0000024
RGD UniProt
PMID:25060689
GO_REF:0000024 MGI:5705211
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
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Lepr
leptin receptor
involved_in
ISO IEA ISS
(PMID:25060689) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:25060689
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
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Mcl1
MCL1 apoptosis regulator, BCL2 family member
involved_in
ISO
(PMID:24113155)
RGD
PMID:24113155
NCBI chr 2:183,219,137...183,235,676
Ensembl chr 2:183,219,220...183,222,303
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Mir223
microRNA 223
IDA
RGD
PMID:29608885
RGD:21408565
NCBI chr X:61,141,887...61,141,996
Ensembl chr X:61,141,887...61,141,996
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Mirlet7b
microRNA let-7b
involved_in
ISO
(PMID:26296645)
RGD
PMID:26296645
NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
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Mtmr9
myotubularin related protein 9
involved_in
ISO IBA
UniProtKB:Q96EF0-1 (PMID:22647598) GO_REF:0000033
RGD GO_Central
PMID:22647598
GO_REF:0000033
NCBI chr15:37,769,161...37,791,195
Ensembl chr15:37,769,078...37,791,244
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Mtor
mechanistic target of rapamycin kinase
involved_in
IMP ISO ISS
(PMID:22424946), (PMID:22576015), (PMID:30704899), (PMID:32561715) (MGI:5285135|PMID:21258367) GO_REF:0000024
RGD UniProt
PMID:21258367 PMID:22424946 PMID:22576015 PMID:30704899 PMID:32561715 PMID:24725502 More...
GO_REF:0000024 MGI:5285135 , RGD:10040964
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Nampt
nicotinamide phosphoribosyltransferase
IMP
RGD
PMID:26601421
RGD:13781888
NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
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Nupr1
nuclear protein 1, transcriptional regulator
involved_in
ISS ISO IMP
GO_REF:0000024 (MGI:6283395|PMID:20181828) (PMID:20181828)
UniProt RGD
PMID:20181828 PMID:20181828
GO_REF:0000024 MGI:6283395 , RGD:14390062
NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
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Ptk2
protein tyrosine kinase 2
acts_upstream_of_or_within
ISO
(MGI:5888970|PMID:27994061)
RGD
PMID:27994061
MGI:5888970
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
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Ptpn22
protein tyrosine phosphatase, non-receptor type 22
involved_in
ISO
(PMID:23991106)
RGD
PMID:23991106
NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
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Rasip1
Ras interacting protein 1
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr 1:96,097,135...96,109,564
Ensembl chr 1:96,091,074...96,109,562
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Rnf5
ring finger protein 5
acts_upstream_of_or_within
ISO
MGI:3775796 (MGI:5469257|PMID:23093945)
RGD
PMID:23093945
MGI:5469257
NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985
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Rptor
regulatory associated protein of MTOR, complex 1
involved_in
ISO
(PMID:32561715)
RGD
PMID:32561715
NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983
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Rraga
Ras-related GTP binding A
involved_in
ISO IBA IEA ISS
(PMID:25936802) GO_REF:0000033 (MGI:5473730|PMID:23263183) GO_REF:0000107 GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:23263183 PMID:25936802
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5473730
NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510
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RragB
Ras-related GTP binding B
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr X:18,184,619...18,234,639
Ensembl chr X:18,184,992...18,234,639
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Rragc
Ras-related GTP binding C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767
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Rragd
Ras-related GTP binding D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:47,373,902...47,409,369
Ensembl chr 5:47,373,463...47,409,356
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Rubcn
rubicon autophagy regulator
involved_in
ISO
(PMID:19270696)
RGD
PMID:19270696
NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
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Sirt2
sirtuin 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20543840)
UniProt Ensembl RGD
PMID:20543840
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
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Slc7a5
solute carrier family 7 member 5
IMP
RGD
PMID:25049270
RGD:151361107
NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
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Stat3
signal transducer and activator of transcription 3
involved_in
ISO IEA
(PMID:26962683) GO_REF:0000107
RGD Ensembl
PMID:26962683
GO_REF:0000107
NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
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Stk38l
serine/threonine kinase 38 like
involved_in
ISO
(PMID:35670107)
RGD
PMID:35670107
NCBI chr 4:179,616,288...179,693,177
Ensembl chr 4:179,634,275...179,690,983
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Tbc1d14
TBC1 domain family, member 14
involved_in
IEA ISO
GO_REF:0000107 (PMID:22613832)
Ensembl RGD
PMID:22613832
GO_REF:0000107
NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
UniProtKB:P05067|UniProtKB:P49768 (MGI:5906931|PMID:28802038)
RGD
PMID:28802038
MGI:5906931
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Trim27
tripartite motif-containing 27
involved_in
ISO
(PMID:35670107)
RGD
PMID:35670107
NCBI chr17:43,538,282...43,550,633
Ensembl chr17:43,538,285...43,550,643
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Vhl
von Hippel-Lindau tumor suppressor
involved_in
ISO
(PMID:30902965)
RGD
PMID:30902965
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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Washc1
WASH complex subunit 1
involved_in
ISO
(MGI:5519172|PMID:23974797)
RGD
PMID:23974797
MGI:5519172
NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
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Wdr6
WD repeat domain 6
involved_in
ISO IEA
(PMID:22354037) GO_REF:0000107
RGD Ensembl
PMID:22354037
GO_REF:0000107
NCBI chr 8:109,268,079...109,274,504
Ensembl chr 8:109,268,079...109,274,499
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Wnk1
WNK lysine deficient protein kinase 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:27911840) GO_REF:0000024
Ensembl RGD UniProt
PMID:27911840
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905
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Zkscan3
zinc finger with KRAB and SCAN domains 3
involved_in
ISO
(PMID:23434374)
RGD
PMID:23434374
NCBI chr17:43,217,168...43,232,828
Ensembl chr17:43,217,222...43,232,827
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Ctsa
cathepsin A
involved_in
ISO
UniProtKB:P10619 (PMID:12505983) (MGI:5700310|PMID:12505983)
RGD
PMID:12505983
MGI:5700310
NCBI chr 3:153,569,106...153,574,983
Ensembl chr 3:153,568,381...153,576,215
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Snca
synuclein alpha
involved_in
ISO IEA
(PMID:20697033) GO_REF:0000107
RGD Ensembl
PMID:20697033
GO_REF:0000107
NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
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Hmox1
heme oxygenase 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2429784 (MGI:5430482|PMID:20705711) GO_REF:0000107
RGD Ensembl
PMID:20705711
GO_REF:0000107 MGI:5430482
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
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Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO
(PMID:19640926)
RGD
PMID:19640926
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
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Lzts1
leucine zipper tumor suppressor 1
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203
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Mtor
mechanistic target of rapamycin kinase
acts_upstream_of_or_within involved_in
ISO IBA IEA
(MGI:3690270|PMID:16714284), (MGI:5563734|PMID:23274896) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (PMID:25327288)
RGD GO_Central TreeGrafter Ensembl
PMID:16714284 PMID:23274896 PMID:25327288
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3690270 MGI:5563734
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Npc1
NPC intracellular cholesterol transporter 1
acts_upstream_of_or_within
ISO
MGI:1857409|MGI:1891828 (MGI:3723543|PMID:17468177)
RGD
PMID:17468177
MGI:3723543
NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
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Nrbp2
nuclear receptor binding protein 2
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr 7:107,798,642...107,805,225
Ensembl chr 7:107,799,497...107,805,230
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:19279012)
RGD
PMID:19279012
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
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Poldip2
DNA polymerase delta interacting protein 2
acts_upstream_of_or_within
ISO
MGI:4044390 (MGI:5588624|PMID:24797518)
RGD
PMID:24797518
MGI:5588624
NCBI chr10:63,407,237...63,417,605
Ensembl chr10:63,407,213...63,417,605
G
Qsox1
quiescin sulfhydryl oxidase 1
involved_in
ISO
(PMID:24475161)
RGD
PMID:24475161
NCBI chr13:67,949,780...67,987,434
Ensembl chr13:67,949,780...67,987,459
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Smcr8
SMCR8-C9orf72 complex subunit
involved_in
ISO
(PMID:28195531)
RGD
PMID:28195531
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
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Tsc1
TSC complex subunit 1
involved_in
IMP
PMID:23435171
ParkinsonsUK-UCL
PMID:23435171
RGD:10448950
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
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Tsc2
TSC complex subunit 2
IMP
RGD
PMID:24599401
RGD:11568679
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
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Usp36
ubiquitin specific peptidase 36
involved_in
ISO
(PMID:22622177)
RGD
PMID:22622177
NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
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Clec16a
C-type lectin domain containing 16A
acts_upstream_of_or_within
ISO
MGI:5648633 (MGI:5603233|PMID:24949970)
RGD
PMID:24949970
MGI:5603233
NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:19279012)
RGD
PMID:19279012
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
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Rnf41
ring finger protein 41
acts_upstream_of_or_within
ISO
MGI:1921624 (MGI:5603233|PMID:24949970)
RGD
PMID:24949970
MGI:5603233
NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511
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Tigar
TP53 induced glycolysis regulatory phosphatase
acts_upstream_of_or_within
ISO
MGI:5319187 (MGI:5319065|PMID:22044588)
RGD
PMID:22044588
MGI:5319065
NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029
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Tp53
tumor protein p53
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1857263 (MGI:5319065|PMID:22044588) GO_REF:0000107
RGD Ensembl
PMID:22044588
GO_REF:0000107 MGI:5319065
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Tspo
translocator protein
involved_in
ISO
(MGI:5689082|PMID:25470454)
RGD
PMID:25470454
MGI:5689082
NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
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Usp30
ubiquitin specific peptidase 30
IMP
RGD
PMID:24896179
RGD:13208875
NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616
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Htra2
HtrA serine peptidase 2
involved_in
ISO
(MGI:5581539|PMID:24709290)
RGD
PMID:24709290
MGI:5581539
NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095
G
Vps13c
vacuolar protein sorting 13 homolog C
involved_in
ISO ISS
(PMID:26942284) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:26942284
GO_REF:0000024
NCBI chr 8:68,478,366...68,651,893
Ensembl chr 8:68,478,395...68,651,895
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Atg12
autophagy related 12
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
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Atg3
autophagy related 3
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr11:55,624,914...55,653,249
Ensembl chr11:55,624,917...55,653,224
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Atg5
autophagy related 5
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Wdr45
WD repeat domain 45
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr X:14,776,280...14,782,202
Ensembl chr X:14,776,293...14,782,202
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Wdr45b
WD repeat domain 45B
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
G
Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
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Hdac6
histone deacetylase 6
involved_in
ISO
UniProtKB:Q9JK66|UniProtKB:Q9Z2V5 (PMID:20457763)
RGD
PMID:20457763
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Mfn2
mitofusin 2
involved_in
ISO IEA
(MGI:5498413|PMID:23620051) GO_REF:0000107
RGD Ensembl
PMID:23620051
GO_REF:0000107 MGI:5498413
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Optn
optineurin
involved_in
ISO IEA
(PMID:25294927) GO_REF:0000107
RGD Ensembl
PMID:25294927
GO_REF:0000107
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO IEA
(PMID:19029340) GO_REF:0000107
RGD Ensembl
PMID:19029340
GO_REF:0000107
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
ISO
(MGI:5298125|PMID:22020285)
RGD
PMID:22020285
MGI:5298125
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
G
AABR07046657.1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 5:1,451,326...1,453,094
G
Acbd5
acyl-CoA binding domain containing 5
involved_in
IEA ISO
GO_REF:0000002 (PMID:24535825)
InterPro RGD
PMID:24535825
GO_REF:0000002
NCBI chr17:85,206,178...85,248,909
Ensembl chr17:85,206,303...85,248,215
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Acbd5l1
acyl-CoA binding domain containing 5 like 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:1,449,905...1,452,857
G
Atm
ATM serine/threonine kinase
involved_in
ISO
(PMID:26344566)
RGD
PMID:26344566
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
G
Pex2
peroxisomal biogenesis factor 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:26344566), (PMID:27597759)
UniProt Ensembl RGD
PMID:26344566 PMID:27597759
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404
G
Pex5
peroxisomal biogenesis factor 5
involved_in
ISS ISO
GO_REF:0000024 (PMID:26344566)
UniProt RGD
PMID:26344566
GO_REF:0000024
NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
G
Pjvk
pejvakin
involved_in
ISO
(MGI:6294584|PMID:30936319)
RGD
PMID:30936319
MGI:6294584
NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
G
Sqstm1
sequestosome 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:26344566)
UniProt RGD
PMID:26344566
GO_REF:0000024
NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
G
Atg12
autophagy related 12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
G
Atg13
autophagy related 13
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
G
Atg2a
autophagy related 2A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
G
Atg2b
autophagy related 2B
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
G
Atg4a
autophagy related 4A, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:104,665,345...104,765,271
Ensembl chr X:104,665,345...104,765,268
G
Atg4b
autophagy related 4B, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
G
Atg4c
autophagy related 4C, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:113,867,218...113,935,534
Ensembl chr 5:113,867,092...113,934,830
G
Atg4d
autophagy related 4D, cysteine peptidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
G
Atg5
autophagy related 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
G
Atg7
autophagy related 7
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
Atg9a
autophagy related 9A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:76,677,403...76,688,050
Ensembl chr 9:76,677,404...76,687,986
G
Atg9b
autophagy related 9B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
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Rb1cc1
RB1-inducible coiled-coil 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
G
Snx30
sorting nexin family member 30
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631
G
Snx7
sorting nexin 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:205,843,164...205,927,737
Ensembl chr 2:205,842,837...205,927,763
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Ulk3
unc-51 like kinase 3
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 8:57,992,396...58,000,220
Ensembl chr 8:57,992,723...57,999,467
G
Bag3
BAG cochaperone 3
involved_in
ISO
(PMID:18006506)
RGD
PMID:18006506
NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
G
Csnk2a1
casein kinase 2 alpha 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:22017874)
UniProt RGD
PMID:22017874
GO_REF:0000024
NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
G
Hspb8
heat shock protein family B (small) member 8
involved_in
ISO
(PMID:18006506)
RGD
PMID:18006506
NCBI chr12:40,176,405...40,205,002
Ensembl chr12:40,176,532...40,191,185
G
Htt
huntingtin
involved_in
IEA ISO
GO_REF:0000107 (PMID:25686248)
Ensembl RGD
PMID:25686248
GO_REF:0000107
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Kat5
lysine acetyltransferase 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:31857589)
Ensembl RGD
PMID:31857589
GO_REF:0000107
NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
G
Zdhhc19
zinc finger DHHC-type palmitoyltransferase 19
involved_in
IEA ISO
GO_REF:0000107 (PMID:37802024)
Ensembl RGD
PMID:37802024
GO_REF:0000107
NCBI chr11:68,277,847...68,289,110
Ensembl chr11:68,277,848...68,288,954
G
Atg2a
autophagy related 2A
involved_in
ISO
(PMID:30952800), (PMID:31271352)
RGD
PMID:30952800 PMID:31271352
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
G
Becn1
beclin 1
IMP
RGD
PMID:25561470
RGD:11561937
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
ISO
(PMID:21072319)
RGD
PMID:21072319
NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
G
Lrsam1
leucine rich repeat and sterile alpha motif containing 1
involved_in
ISO
(PMID:25484098)
RGD
PMID:25484098
NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154
G
Moap1
modulator of apoptosis 1
involved_in
ISO
(PMID:33783314) (MGI:6810697|PMID:33783314)
RGD
PMID:33783314
MGI:6810697
NCBI chr 6:121,882,565...121,884,500
Ensembl chr 6:121,882,366...121,898,643
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Pip4k2a
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
G
Pip4k2b
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
G
Pip4k2c
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078
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Rab3gap1
RAB3 GTPase activating protein catalytic subunit 1
involved_in
ISO ISS IEA
(PMID:25495476) GO_REF:0000024 GO_REF:0000107
RGD GO_Central Ensembl
PMID:25495476
GO_REF:0000024 GO_REF:0000107
NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
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Rab3gap2
RAB3 GTPase activating non-catalytic protein subunit 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:25495476) GO_REF:0000107
GO_Central RGD Ensembl
PMID:25495476
GO_REF:0000024 GO_REF:0000107
NCBI chr13:96,757,430...96,828,930
Ensembl chr13:96,757,460...96,829,478
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Ralb
RAS like proto-oncogene B
involved_in
ISO IEA
(PMID:24056301) GO_REF:0000107
RGD Ensembl
PMID:24056301
GO_REF:0000107
NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202
G
Sh3glb1
SH3 domain -containing GRB2-like endophilin B1
involved_in
ISO IEA
(PMID:21068542) (MGI:5634888|PMID:21068542) GO_REF:0000107
RGD Ensembl
PMID:21068542
GO_REF:0000107 MGI:5634888
NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
G
Snx18
sorting nexin 18
involved_in
ISO
(PMID:29437695)
RGD
PMID:29437695
NCBI chr 2:45,232,325...45,258,345
Ensembl chr 2:45,232,325...45,258,345
G
Snx30
sorting nexin family member 30
involved_in
ISO
(PMID:32513819)
RGD
PMID:32513819
NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631
G
Snx4
sorting nexin 4
involved_in
ISO IBA
(PMID:32513819), (PMID:33468622) GO_REF:0000033
RGD GO_Central
PMID:32513819 PMID:33468622
GO_REF:0000033
NCBI chr11:67,460,872...67,518,143
Ensembl chr11:67,460,870...67,518,174
G
Snx7
sorting nexin 7
involved_in
ISO
(PMID:32513819)
RGD
PMID:32513819
NCBI chr 2:205,843,164...205,927,737
Ensembl chr 2:205,842,837...205,927,763
G
Trim32
tripartite motif-containing 32
involved_in
ISO
(PMID:37943659)
RGD
PMID:37943659
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
G
Ulk1
unc-51 like autophagy activating kinase 1
IMP
RGD
PMID:23448468
RGD:13208863
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Wdr45
WD repeat domain 45
involved_in
ISO ISS IEA
(PMID:31271352) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:31271352
GO_REF:0000024 GO_REF:0000107
NCBI chr X:14,776,280...14,782,202
Ensembl chr X:14,776,293...14,782,202
G
Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
ISO
(PMID:31271352)
RGD
PMID:31271352
NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
G
AABR07025818.1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr16:48,598,506...48,599,444
G
Adrb2
adrenoceptor beta 2
involved_in
ISO IEA ISS
(PMID:23708524) GO_REF:0000107 GO_REF:0000024
RGD Ensembl GO_Central
PMID:23708524
GO_REF:0000024 GO_REF:0000107
NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
G
Calcoco2
calcium binding and coiled-coil domain 2
involved_in
ISO
(PMID:25771791)
RGD
PMID:25771791
NCBI chr10:81,055,467...81,069,298
G
Clec16a
C-type lectin domain containing 16A
acts_upstream_of_or_within
ISO
MGI:5648633 (MGI:5603233|PMID:24949970)
RGD
PMID:24949970
MGI:5603233
NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578
G
ENSRNOG00000066153
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr10:81,068,011...81,069,397
G
Fyco1
FYVE and coiled-coil domain autophagy adaptor 1
involved_in
ISO IBA
(PMID:26468287) GO_REF:0000033
RGD GO_Central
PMID:26468287
GO_REF:0000033
NCBI chr 8:123,412,105...123,479,315
Ensembl chr 8:123,412,112...123,479,021
G
Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:16888103) (MGI:3656111|PMID:16888103)
RGD
PMID:16888103
MGI:3656111
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
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Smcr8
SMCR8-C9orf72 complex subunit
involved_in
ISO
(PMID:28195531)
RGD
PMID:28195531
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
G
Tom1
target of myb1 membrane trafficking protein
involved_in
ISO
(PMID:23023224)
RGD
PMID:23023224
NCBI chr19:13,405,482...13,440,384
Ensembl chr19:13,405,501...13,440,384
G
Ager
advanced glycosylation end product-specific receptor
IMP
RGD
PMID:22293957
RGD:7245565
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
G
Ambra1
autophagy and beclin 1 regulator 1
involved_in
IMP ISO
(MGI:6810795|PMID:24980959) (PMID:21358617), (PMID:31123703), (PMID:32333458)
RGD
PMID:21358617 PMID:24980959 PMID:31123703 PMID:32333458 PMID:25117440
MGI:6810795 , RGD:11552604
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
G
Atf6
activating transcription factor 6
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:28747345) GO_REF:0000107
RGD Ensembl
PMID:28747345
GO_REF:0000107
NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
G
Atg101
autophagy related 101
involved_in
ISO IEA
(MGI:6810791|PMID:19225151) GO_REF:0000107
RGD Ensembl
PMID:19225151
GO_REF:0000107 MGI:6810791
NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633
G
Atg13
autophagy related 13
involved_in
ISO
(MGI:6810791|PMID:19225151) (PMID:29487085)
RGD
PMID:19225151 PMID:29487085
MGI:6810791
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
G
Atg16l1
autophagy related 16-like 1
involved_in
ISO
(MGI:6271293|PMID:30208760)
RGD
PMID:30208760
MGI:6271293
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Atg7
autophagy related 7
IDA IMP
RGD
PMID:24674959 PMID:25639566
RGD:11553823 , RGD:11553824
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
Becn1
beclin 1
involved_in
IMP ISS ISO
GO_REF:0000024 (PMID:21358617)
UniProt RGD
PMID:21358617 PMID:21490676 PMID:24674959
GO_REF:0000024, RGD:6483070 , RGD:11553823
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
G
Ccny
cyclin Y
involved_in
ISO
(PMID:32098961)
RGD
PMID:32098961
NCBI chr17:57,385,002...57,512,860
Ensembl chr17:57,384,176...57,522,378
G
Cdk16
cyclin-dependent kinase 16
involved_in
ISO IEA
(PMID:32098961) GO_REF:0000107
RGD Ensembl
PMID:32098961
GO_REF:0000107
NCBI chr X:1,492,814...1,504,309
Ensembl chr X:1,492,814...1,504,148
G
Dapk1
death associated protein kinase 1
involved_in
ISO
(PMID:22095288)
RGD
PMID:22095288
NCBI chr17:3,930,223...4,090,991
Ensembl chr17:3,930,213...4,090,991
G
Dcn
decorin
involved_in
ISO
(PMID:23798385)
RGD
PMID:23798385
NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
G
Depdc5
DEP domain containing 5, GATOR1 subcomplex subunit
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:77,732,297...77,862,924
Ensembl chr14:77,732,297...77,862,794
G
Deptor
DEP domain containing MTOR-interacting protein
involved_in
ISO
(PMID:22017875), (PMID:22017876), (PMID:22017877)
RGD
PMID:22017875 PMID:22017876 PMID:22017877
NCBI chr 7:86,514,859...86,668,817
Ensembl chr 7:86,514,988...86,667,773
G
Dhrsx
dehydrogenase/reductase X-linked
involved_in
ISO IBA
(PMID:25076851) GO_REF:0000033
RGD GO_Central
PMID:25076851
GO_REF:0000033
NCBI chr12:16,299,768...16,304,553
Ensembl chr12:16,299,808...16,304,552
G
Endog
endonuclease G
involved_in
ISO
(PMID:33473107) (MGI:6504770|PMID:33473107)
RGD
PMID:33473107
MGI:6504770
NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
G
Flcn
folliculin
involved_in
ISO ISS
(PMID:25126726) GO_REF:0000024
RGD UniProt
PMID:25126726
GO_REF:0000024
NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
G
Foxo1
forkhead box O1
involved_in
ISO ISS
(PMID:20543840) GO_REF:0000024
RGD UniProt
PMID:20543840
GO_REF:0000024
NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
G
Foxo3
forkhead box O3
involved_in
ISO
(MGI:3771642|PMID:18054316), (MGI:3771681|PMID:18054315)
RGD
PMID:18054315 PMID:18054316
MGI:3771642 MGI:3771681
NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
G
Gsk3a
glycogen synthase kinase 3 alpha
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5319706|PMID:22539723)
UniProt Ensembl RGD
PMID:22539723
GO_REF:0000024 GO_REF:0000107 MGI:5319706
NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISS ISO
GO_REF:0000024 RNAcentral:URS0000554A4F_10090 (MGI:5319706|PMID:22539723), (MGI:5825416|PMID:26160071)
UniProt RGD
PMID:22539723 PMID:26160071
GO_REF:0000024 MGI:5319706 MGI:5825416
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
ISO
(MGI:3796473|PMID:18281291)
RGD
PMID:18281291
MGI:3796473
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hmgb1
high mobility group box 1
involved_in
IMP ISO
(MGI:5634889|PMID:20819940) (PMID:20819940)
RGD
PMID:20819940 PMID:23604926
MGI:5634889 , RGD:10402086
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
G
Ifnb1
interferon beta 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5695780|PMID:26451483)
UniProt RGD
PMID:26451483
GO_REF:0000024 MGI:5695780
NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523
G
Ifng
interferon gamma
involved_in
ISO ISS
(PMID:23629966), (PMID:26347139) GO_REF:0000024
RGD UniProt
PMID:23629966 PMID:26347139
GO_REF:0000024
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Irgm
immunity-related GTPase M
involved_in
ISS ISO
GO_REF:0000024 (MGI:3656111|PMID:16888103), (MGI:4354422|PMID:19620982), (MGI:6246109|PMID:24751652), (MGI:6840077|PMID:22874556) (PMID:16888103), (PMID:25891078), (PMID:28389568), (PMID:29420192)
UniProt RGD
PMID:16888103 PMID:19620982 PMID:22874556 PMID:24751652 PMID:25891078 PMID:28389568 PMID:29420192 More...
GO_REF:0000024 MGI:3656111 MGI:4354422 MGI:6246109 MGI:6840077
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
Kat5
lysine acetyltransferase 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:5319706|PMID:22539723) (PMID:30704899)
UniProt RGD
PMID:22539723 PMID:30704899
GO_REF:0000024 MGI:5319706
NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO
(PMID:22012985) (MGI:4454597|PMID:20457918)
RGD
PMID:20457918 PMID:22012985
MGI:4454597
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Map2k1
mitogen activated protein kinase kinase 1
IDA
RGD
PMID:26581593
RGD:12879823
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
G
Map3k7
mitogen activated protein kinase kinase kinase 7
IMP
RGD
PMID:35078016
RGD:155804282
NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
G
Mefv
MEFV innate immunity regulator, pyrin
involved_in
ISS ISO
GO_REF:0000024 (PMID:26347139)
UniProt RGD
PMID:26347139
GO_REF:0000024
NCBI chr10:11,786,948...11,796,977
Ensembl chr10:11,787,422...11,796,973
G
Mid2
midline 2
involved_in
ISO
(PMID:26347139)
RGD
PMID:26347139
NCBI chr X:104,354,692...104,456,757
Ensembl chr X:104,355,316...104,453,473
G
Mir222
microRNA 222
IMP
RGD
PMID:33792838
RGD:152025536
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Mtdh
metadherin
involved_in
ISO IEA
(PMID:21127263) GO_REF:0000107
RGD Ensembl
PMID:21127263
GO_REF:0000107
NCBI chr 7:65,306,464...65,365,647
Ensembl chr 7:65,306,400...65,364,413
G
Nod1
nucleotide-binding oligomerization domain containing 1
involved_in
ISO
(MGI:4437194|PMID:19898471)
RGD
PMID:19898471
MGI:4437194
NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
G
Nod2
nucleotide-binding oligomerization domain containing 2
involved_in
ISO
(MGI:4437194|PMID:19898471), (MGI:7484279|PMID:19966812)
RGD
PMID:19898471 PMID:19966812
MGI:4437194 MGI:7484279
NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
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Nprl2
NPR2-like, GATOR1 complex subunit
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:108,215,823...108,218,996
Ensembl chr 8:108,215,814...108,218,996
G
Nprl3
NPR3-like, GATOR1 complex subunit
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:15,355,361...15,395,812
Ensembl chr10:15,355,355...15,395,810
G
Optn
optineurin
involved_in
ISO
(PMID:21617041)
RGD
PMID:21617041
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
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Ormdl3
ORMDL sphingolipid biosynthesis regulator 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:28747345) MGI:6369059 (MGI:6099440|PMID:28747345)
Ensembl RGD
PMID:28747345
GO_REF:0000107 MGI:6099440
NCBI chr10:83,590,052...83,596,035
Ensembl chr10:83,590,071...83,598,620
G
Pik3c2a
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
involved_in
ISO
(PMID:28910396)
RGD
PMID:28910396
NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
G
Pim2
Pim-2 proto-oncogene, serine/threonine kinase
involved_in
ISO
(MGI:4361989|PMID:17476689)
RGD
PMID:17476689
MGI:4361989
NCBI chr X:14,617,582...14,622,851
Ensembl chr X:14,617,582...14,622,851
G
Plekhf1
pleckstrin homology and FYVE domain containing 1
involved_in
ISO IBA
(PMID:22115783) GO_REF:0000033
RGD GO_Central
PMID:22115783
GO_REF:0000033
NCBI chr 1:90,908,304...90,915,862
Ensembl chr 1:90,904,742...90,915,820
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Plk2
polo-like kinase 2
involved_in
ISO IEA
(PMID:23983262) GO_REF:0000107
RGD Ensembl
PMID:23983262
GO_REF:0000107
NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
G
Prkaa1
protein kinase AMP-activated catalytic subunit alpha 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:22012985), (PMID:25891078), (PMID:26103054) (MGI:5285135|PMID:21258367)
UniProt RGD
PMID:21258367 PMID:22012985 PMID:25891078 PMID:26103054
GO_REF:0000024 MGI:5285135
NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
G
Prkaa2
protein kinase AMP-activated catalytic subunit alpha 2
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5285135|PMID:21258367) GO_REF:0000024
Ensembl RGD UniProt
PMID:21258367
GO_REF:0000024 GO_REF:0000107 MGI:5285135
NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
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Prkd1
protein kinase D1
involved_in
ISO
(PMID:22095288)
RGD
PMID:22095288
NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
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Rb1cc1
RB1-inducible coiled-coil 1
involved_in
ISO
(MGI:6810791|PMID:19225151)
RGD
PMID:19225151
MGI:6810791
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
G
Rfpl4a
ret finger protein-like 4A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:68,728,964...68,735,423
Ensembl chr 1:68,728,964...68,735,423
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Rnf152
ring finger protein 152
involved_in
ISO IBA ISS
(PMID:25936802) GO_REF:0000033 (MGI:5644195|PMID:25936802) GO_REF:0000024
RGD GO_Central UniProt
PMID:25936802
GO_REF:0000024 GO_REF:0000033 MGI:5644195
NCBI chr13:21,324,039...21,403,405
Ensembl chr13:21,323,824...21,403,113
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
ISO IEA
UniProtKB:Q14457 (PMID:27853422) GO_REF:0000107
RGD Ensembl
PMID:27853422
GO_REF:0000107
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
Setd2
SET domain containing 2, histone lysine methyltransferase
involved_in
ISO
(PMID:36359729)
RGD
PMID:36359729
NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489
G
Sh3bp4
SH3-domain binding protein 4
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:22575674)
UniProt Ensembl RGD
PMID:22575674
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:89,660,156...89,739,163
Ensembl chr 9:89,660,156...89,739,163
G
Sh3glb1
SH3 domain -containing GRB2-like endophilin B1
involved_in
ISO
(PMID:17891140) (MGI:3770552|PMID:17891140)
RGD
PMID:17891140
MGI:3770552
NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
G
Slc35d3
solute carrier family 35, member D3
involved_in
ISO
(MGI:6851482|PMID:27171858)
RGD
PMID:27171858
MGI:6851482
NCBI chr 1:14,565,482...14,573,581
Ensembl chr 1:14,569,687...14,573,159
G
Smo
smoothened, frizzled class receptor
IDA
RGD
PMID:31221056
RGD:150521664
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Sqstm1
sequestosome 1
involved_in
ISO
(PMID:28871090)
RGD
PMID:28871090
NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
G
Stk11
serine/threonine kinase 11
involved_in
ISO
(PMID:23878245)
RGD
PMID:23878245
NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
G
Svip
small VCP interacting protein
involved_in
ISO IBA IEA
(PMID:21909394) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:21909394
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
G
Tbk1
TANK-binding kinase 1
involved_in
ISO
(PMID:28871090)
RGD
PMID:28871090
NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
G
Tfeb
transcription factor EB
involved_in
ISO
(PMID:21617040), (PMID:22576015), (PMID:23434374)
RGD
PMID:21617040 PMID:22576015 PMID:23434374
NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714
G
Ticam1
TIR domain containing adaptor molecule 1
involved_in
ISO
(MGI:3718934|PMID:17658277)
RGD
PMID:17658277
MGI:3718934
NCBI chr 9:1,102,559...1,111,023
Ensembl chr 9:1,102,366...1,123,147
G
Tlr9
toll-like receptor 9
IDA
RGD
PMID:18632594
RGD:2301341
NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
G
Tmem59
transmembrane protein 59
involved_in
ISO IBA
(PMID:23376921) GO_REF:0000033
RGD GO_Central
PMID:23376921
GO_REF:0000033
NCBI chr 5:121,962,507...121,983,625
Ensembl chr 5:121,962,440...121,983,625
G
Tp53inp1
tumor protein p53 inducible nuclear protein 1
involved_in
ISO IEA ISS
(PMID:22421968), (PMID:22470510) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:22421968 PMID:22470510
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
G
Tpcn1
two pore segment channel 1
involved_in
ISO IEA
(PMID:22012985) GO_REF:0000107
RGD Ensembl
PMID:22012985
GO_REF:0000107
NCBI chr12:35,972,813...36,029,632
Ensembl chr12:35,972,846...36,029,626
G
Trim21
tripartite motif-containing 21
involved_in
ISO IBA
(PMID:26347139) GO_REF:0000033
RGD GO_Central
PMID:26347139
GO_REF:0000033
NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440
G
Trim23
tripartite motif-containing 23
involved_in
IEA ISO
GO_REF:0000107 (PMID:28871090)
Ensembl RGD
PMID:28871090
GO_REF:0000107
NCBI chr 2:35,302,405...35,335,746
Ensembl chr 2:35,302,409...35,335,743
G
Trim30c
tripartite motif-containing 30C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:158,766,401...158,787,915
Ensembl chr 1:158,765,969...158,787,183
G
Trim30d
tripartite motif-containing 30D
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 1:158,795,288...158,813,913
Ensembl chr 1:158,720,410...158,814,012
G
Trim32
tripartite motif-containing 32
involved_in
ISO
(PMID:31123703)
RGD
PMID:31123703
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
G
Trim34
tripartite motif-containing 34
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:158,707,172...158,720,214
Ensembl chr 1:158,707,172...158,718,674
G
Trim5
tripartite motif-containing 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
G
Trim58
tripartite motif-containing 58
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:43,022,933...43,038,984
Ensembl chr10:43,022,996...43,034,476
G
Trim6
tripartite motif containing 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914
G
Trim65
tripartite motif-containing 65
involved_in
ISO IBA
(PMID:26347139) GO_REF:0000033
RGD GO_Central
PMID:26347139
GO_REF:0000033
NCBI chr10:101,357,937...101,364,036
Ensembl chr10:101,357,937...101,364,971
G
Trim68
tripartite motif containing 68
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:157,114,044...157,127,494
Ensembl chr 1:157,114,044...157,127,477
G
Trim8
tripartite motif-containing 8
involved_in
ISO
(PMID:26347139)
RGD
PMID:26347139
NCBI chr 1:245,369,632...245,384,513
Ensembl chr 1:245,369,632...245,384,513
G
Tsc2
TSC complex subunit 2
involved_in
ISO
(MGI:5509101|PMID:23878245)
RGD
PMID:23878245
MGI:5509101
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Ufl1
Ufm1-specific ligase 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5818653|PMID:25952549)
UniProt RGD
PMID:25952549
GO_REF:0000024 MGI:5818653
NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in
ISO IBA
(MGI:5319706|PMID:22539723), (MGI:6810791|PMID:19225151) GO_REF:0000033 (PMID:25126726), (PMID:29487085), (PMID:35670107)
RGD GO_Central
PMID:19225151 PMID:22539723 PMID:25126726 PMID:29487085 PMID:35670107
GO_REF:0000033 MGI:5319706 MGI:6810791
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Usp20
ubiquitin specific peptidase 20
involved_in
ISO
(PMID:29487085)
RGD
PMID:29487085
NCBI chr 3:14,272,737...14,306,409
Ensembl chr 3:14,272,908...14,306,409
G
Xbp1
X-box binding protein 1
involved_in
ISO
(PMID:23184933)
RGD
PMID:23184933
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
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Zc3h12a
zinc finger CCCH type containing 12A
involved_in
ISO
(PMID:22739135) (MGI:5487497|PMID:22739135)
RGD
PMID:22739135
MGI:5487497
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
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Bcl2l11
Bcl2-like 11
IMP
RGD
PMID:25772147
RGD:13782257
NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068
G
Bid
BH3 interacting domain death agonist
IMP
RGD
PMID:25772147
RGD:13782257
NCBI chr 4:154,113,198...154,136,353
Ensembl chr 4:154,113,198...154,134,720
G
Ddit3
DNA-damage inducible transcript 3
IMP
RGD
PMID:25772147
RGD:13782257
NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
G
Bnip3
BCL2 interacting protein 3
IMP
RGD
PMID:23698117
RGD:11561968
NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
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Fbxo7
F-box protein 7
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
G
Atp5if1
ATP synthase inhibitory factor subunit 1
involved_in
ISO
(PMID:24005319)
RGD
PMID:24005319
NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668
G
Gba1
glucosylceramidase beta 1
acts_upstream_of_or_within
ISO
(MGI:5501380|PMID:23707074)
RGD
PMID:23707074
MGI:5501380
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
G
Hk2
hexokinase 2
involved_in
ISO
(PMID:23962723)
RGD
PMID:23962723
NCBI chr 4:115,234,509...115,283,530
Ensembl chr 4:115,234,509...115,283,530
G
Mul1
mitochondrial E3 ubiquitin protein ligase 1
involved_in
ISO
(MGI:5581539|PMID:24709290)
RGD
PMID:24709290
MGI:5581539
NCBI chr 5:150,652,812...150,661,863
Ensembl chr 5:150,652,812...150,661,863
G
Pink1
PTEN induced kinase 1
IMP
RGD
PMID:25154397
RGD:12904014
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Plk3
polo-like kinase 3
involved_in
ISO
(PMID:27344333)
RGD
PMID:27344333
NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317
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Adrb2
adrenoceptor beta 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:23708524) GO_REF:0000107
GO_Central RGD Ensembl
PMID:23708524
GO_REF:0000024 GO_REF:0000107
NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
G
Htt
huntingtin
involved_in
ISO IEA
(PMID:25686248) GO_REF:0000107
RGD Ensembl
PMID:25686248
GO_REF:0000107
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Sesn2
sestrin 2
acts_upstream_of_or_within
ISO
MGI:3587950 (MGI:5444071|PMID:22958918)
RGD
PMID:22958918
MGI:5444071
NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
G
Sptlc1
serine palmitoyltransferase, long chain base subunit 1
acts_upstream_of_or_within
ISO
(PMID:25332431)
RGD
PMID:25332431
NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
G
Sptlc2
serine palmitoyltransferase, long chain base subunit 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:25332431) GO_REF:0000107
RGD Ensembl
PMID:25332431
GO_REF:0000107
NCBI chr 6:106,948,682...107,031,532
Ensembl chr 6:106,950,949...107,031,542
G
Bnip3
BCL2 interacting protein 3
acts_upstream_of_or_within
ISO
UniProtKB:O60238 (PMID:19273585)
RGD
PMID:19273585
NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
G
Bnip3l
BCL2 interacting protein 3 like
acts_upstream_of_or_within
ISO
UniProtKB:Q12983 (PMID:19273585)
RGD
PMID:19273585
NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
G
Dcn
decorin
acts_upstream_of_or_within involved_in
ISO IEA
UniProtKB:P35968 (PMID:23798385) GO_REF:0000107
RGD Ensembl
PMID:23798385
GO_REF:0000107
NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
G
Epm2a
EPM2A glucan phosphatase, laforin
acts_upstream_of_or_within involved_in
ISO IEA
MGI:102548|MGI:2182627 (MGI:4457987|PMID:20453062) GO_REF:0000107 (PMID:20453062)
RGD Ensembl
PMID:20453062
GO_REF:0000107 MGI:4457987
NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
G
Gnai3
G protein subunit alpha i3
involved_in
ISO IEA
(PMID:12642577) GO_REF:0000107
RGD Ensembl
PMID:12642577
GO_REF:0000107
NCBI chr 2:195,742,765...195,780,720
Ensembl chr 2:195,742,642...195,780,742
G
Gpsm1
G-protein signaling modulator 1
involved_in
ISO
(PMID:12642577)
RGD
PMID:12642577
NCBI chr 3:9,140,816...9,167,828
Ensembl chr 3:9,128,636...9,167,827
G
Hif1a
hypoxia inducible factor 1 subunit alpha
acts_upstream_of_or_within
ISO
MGI:2386679 (MGI:3847365|PMID:19273585)
RGD
PMID:19273585
MGI:3847365
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hmox1
heme oxygenase 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2429784 (MGI:5430482|PMID:20705711) GO_REF:0000107
RGD Ensembl
PMID:20705711
GO_REF:0000107 MGI:5430482
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
G
Ikbkg
inhibitor of nuclear factor kappa B kinase regulatory subunit gamma
involved_in
ISO
(MGI:5819337|PMID:23778976)
RGD
PMID:23778976
MGI:5819337
NCBI chr X:152,216,485...152,241,476
Ensembl chr X:152,216,596...152,239,499
G
Il4
interleukin 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:5702366|PMID:26416964)
UniProt RGD
PMID:26416964
GO_REF:0000024 MGI:5702366
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Kdr
kinase insert domain receptor
acts_upstream_of_or_within involved_in
ISO IEA
UniProtKB:P07585 (PMID:23798385) GO_REF:0000107
RGD Ensembl
PMID:23798385
GO_REF:0000107
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Larp1
La ribonucleoprotein 1, translational regulator
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
G
Map3k7
mitogen activated protein kinase kinase kinase 7
involved_in
ISO
(MGI:5819337|PMID:23778976)
RGD
PMID:23778976
MGI:5819337
NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
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Pafah1b2
platelet-activating factor acetylhydrolase 1b, catalytic subunit 2
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr 8:46,260,069...46,312,073
Ensembl chr 8:46,261,064...46,279,833
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Pim2
Pim-2 proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
(MGI:4361989|PMID:17476689)
RGD
PMID:17476689
MGI:4361989
NCBI chr X:14,617,582...14,622,851
Ensembl chr X:14,617,582...14,622,851
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:20871098)
RGD
PMID:20871098
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
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Rab12
RAB12, member RAS oncogene family
involved_in
ISO
(MGI:5574288|PMID:23357852)
RGD
PMID:23357852
MGI:5574288
NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
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RGD1359108
similar to RIKEN cDNA 3110043O21
involved_in
ISO IEA ISS
UniProtKB:Q96DA2 (PMID:27103069), (PMID:27334615) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27103069 PMID:27334615
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
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Rufy4
RUN and FYVE domain containing 4
involved_in
ISO IBA
(PMID:26416964) GO_REF:0000033
RGD GO_Central
PMID:26416964
GO_REF:0000033
NCBI chr 9:75,702,937...75,727,719
Ensembl chr 9:75,703,750...75,723,525
G
Scoc
short coiled-coil protein
involved_in
ISO ISS
(PMID:22354037) GO_REF:0000024
RGD GO_Central
PMID:22354037
GO_REF:0000024
NCBI chr19:24,659,651...24,689,237
Ensembl chr19:24,659,651...24,693,217
G
Sesn1
sestrin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
G
Sesn2
sestrin 2
involved_in
ISO IBA
(PMID:23274085) GO_REF:0000033
RGD GO_Central
PMID:23274085
GO_REF:0000033
NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
G
Sesn3
sestrin 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842
G
Sirt1
sirtuin 1
involved_in
ISO IEA
(PMID:18296641) GO_REF:0000107 (MGI:3776699|PMID:18296641), (MGI:4940431|PMID:21189328)
RGD Ensembl
PMID:18296641 PMID:21189328
GO_REF:0000107 MGI:3776699 MGI:4940431
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
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Sting1
stimulator of interferon response cGAMP interactor 1
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (PMID:30568238), (PMID:30842662), (PMID:37535724) GO_REF:0000107 (MGI:6305034|PMID:30568238)
UniProt GO_Central RGD Ensembl
PMID:30568238 PMID:30842662 PMID:37535724
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6305034
NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
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Supt5h
SPT5 homolog, DSIF elongation factor subunit
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr 1:83,586,713...83,616,971
Ensembl chr 1:83,586,718...83,616,892
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Tbk1
TANK-binding kinase 1
involved_in
ISO
(PMID:27103069)
RGD
PMID:27103069
NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
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Trim13
tripartite motif-containing 13
involved_in
ISO IBA IEA
(PMID:22178386) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:22178386
GO_REF:0000033 GO_REF:0000107
NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677
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Tsc1
TSC complex subunit 1
IDA
RGD
PMID:23435171
RGD:10448950
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
G
Tsc2
TSC complex subunit 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:4457987|PMID:20453062) (MGI:5819337|PMID:23778976) UniProtKB:Q61037 (PMID:23778976)
Ensembl RGD
PMID:20453062 PMID:23778976
GO_REF:0000107 MGI:4457987 MGI:5819337
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
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Wac
WW domain containing adaptor with coiled-coil
involved_in
ISO
(PMID:22354037)
RGD
PMID:22354037
NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
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Wdr24
WD repeat domain 24
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:14,844,089...14,848,871
Ensembl chr10:14,843,728...14,848,864
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Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO
(PMID:30217973)
RGD
PMID:30217973
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
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Cers1
ceramide synthase 1
involved_in
ISO
(PMID:22922758)
RGD
PMID:22922758
NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
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Fbxo7
F-box protein 7
involved_in
IMP ISO
PMID:26310625 (PMID:26310625)
RGD
PMID:26310625 PMID:26310625
RGD:11536096
NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
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Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
IEA ISO
GO_REF:0000107 (MGI:3796473|PMID:18281291)
Ensembl RGD
PMID:18281291
GO_REF:0000107 MGI:3796473
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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Htt
huntingtin
involved_in
IEA ISO
GO_REF:0000107 (PMID:25686248)
Ensembl RGD
PMID:25686248
GO_REF:0000107
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Irgm
immunity-related GTPase M
involved_in
ISS ISO
GO_REF:0000024 (MGI:6705154|PMID:33510463) (PMID:21102437) (PMID:32939830)
UniProt RGD
PMID:21102437 PMID:32939830 PMID:33510463
GO_REF:0000024 MGI:6705154
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
Nod2
nucleotide-binding oligomerization domain containing 2
involved_in
ISO
(MGI:6388731|PMID:31919280)
RGD
PMID:31919280
MGI:6388731
NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
G
Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
IMP ISO IEA
(PMID:26310625) GO_REF:0000107
RGD Ensembl
PMID:26310625 PMID:28608965
GO_REF:0000107, RGD:13432560
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Slc25a4
solute carrier family 25 member 4
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:6407583|PMID:31618756) GO_REF:0000107
UniProt RGD Ensembl
PMID:31618756
GO_REF:0000024 GO_REF:0000107 MGI:6407583
NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
G
Slc25a5
solute carrier family 25 member 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:6407583|PMID:31618756)
UniProt RGD
PMID:31618756
GO_REF:0000024 MGI:6407583
NCBI chr X:116,031,896...116,034,963
Ensembl chr X:116,031,803...116,034,967
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Vps13d
vacuolar protein sorting 13 homolog D
involved_in
ISO
(PMID:29307555)
RGD
PMID:29307555
NCBI chr 5:156,830,509...157,055,895
Ensembl chr 5:156,830,512...157,055,891
G
Cdc37
cell division cycle 37, HSP90 cochaperone
involved_in
ISO IEA
(MGI:5607224|PMID:21855797) GO_REF:0000107
RGD Ensembl
PMID:21855797
GO_REF:0000107 MGI:5607224
NCBI chr 8:19,677,400...19,690,761
Ensembl chr 8:19,671,938...19,690,809
G
Hdac6
histone deacetylase 6
involved_in
ISO
UniProtKB:Q9JK66 (MGI:5616310|PMID:20457763)
RGD
PMID:20457763
MGI:5616310
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:30217973)
RGD
PMID:30217973
NCBI chr X:20,873,795...21,001,378
Ensembl chr X:20,873,795...21,001,262
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:20871098)
RGD
PMID:20871098
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO
(PMID:20457763), (PMID:20871098), (PMID:23212910)
RGD
PMID:20457763 PMID:20871098 PMID:23212910
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Tomm7
translocase of outer mitochondrial membrane 7
involved_in
ISO
(PMID:24270810)
RGD
PMID:24270810
NCBI chr 4:11,305,122...11,311,963
Ensembl chr 4:11,305,110...11,311,962
G
Vdac1
voltage-dependent anion channel 1
involved_in
ISO
(PMID:32047033)
RGD
PMID:32047033
NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
G
Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:25891078)
RGD
PMID:25891078
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
Lrsam1
leucine rich repeat and sterile alpha motif containing 1
involved_in
ISO
(PMID:23245322)
RGD
PMID:23245322
NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
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Nod1
nucleotide-binding oligomerization domain containing 1
acts_upstream_of_or_within
ISO
MGI:2674231 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:3529594 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
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Optn
optineurin
involved_in
ISO IEA
(PMID:21617041) GO_REF:0000107
RGD Ensembl
PMID:21617041
GO_REF:0000107
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
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Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2660793 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
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Rnf31
ring finger protein 31
involved_in
ISO
(PMID:28481331)
RGD
PMID:28481331
NCBI chr15:29,083,047...29,095,328
Ensembl chr15:29,083,631...29,101,915
G
Tbk1
TANK-binding kinase 1
involved_in
ISO
(MGI:5645201|PMID:21617041)
RGD
PMID:21617041
MGI:5645201
NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
G
Tlr2
toll-like receptor 2
acts_upstream_of_or_within
ISO
MGI:2674036 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
G
Arfip2
ADP-ribosylation factor interacting protein 2
involved_in
ISO ISS
(PMID:33773106) GO_REF:0000024
RGD UniProt
PMID:33773106
GO_REF:0000024
NCBI chr 1:159,974,255...159,980,398
Ensembl chr 1:159,974,201...159,980,336
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Atg13
autophagy related 13
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
G
Atg16l1
autophagy related 16-like 1
acts_upstream_of_or_within
ISO
PR:Q80W47 (MGI:5605433|PMID:24954904)
RGD
PMID:24954904
MGI:5605433
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
G
Atg4b
autophagy related 4B, cysteine peptidase
involved_in
ISO IEA
(PMID:33773106) GO_REF:0000107
RGD Ensembl
PMID:33773106
GO_REF:0000107
NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
G
Atg4d
autophagy related 4D, cysteine peptidase
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
G
Atg9a
autophagy related 9A
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 9:76,677,403...76,688,050
Ensembl chr 9:76,677,404...76,687,986
G
Atg9b
autophagy related 9B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
G
Lrba
LPS responsive beige-like anchor protein
involved_in
ISO
(PMID:33773106)
RGD
PMID:33773106
NCBI chr 2:171,623,668...172,202,576
Ensembl chr 2:171,621,507...172,202,724
G
Mfn2
mitofusin 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425) GO_REF:0000107
RGD Ensembl
PMID:23455425
GO_REF:0000107
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Pacs2
phosphofurin acidic cluster sorting protein 2
acts_upstream_of_or_within
ISO
(PMID:23455425)
RGD
PMID:23455425
NCBI chr 6:132,096,992...132,156,702
Ensembl chr 6:132,096,901...132,154,583
G
Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5565574|PMID:24098492) GO_REF:0000107
RGD Ensembl
PMID:24098492
GO_REF:0000107 MGI:5565574
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
G
Stx17
syntaxin 17
acts_upstream_of_or_within
ISO
(PMID:23455425)
RGD
PMID:23455425
NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
G
Wdr45
WD repeat domain 45
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr X:14,776,280...14,782,202
Ensembl chr X:14,776,293...14,782,202
G
Wdr45b
WD repeat domain 45B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
G
Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
involved_in acts_upstream_of_or_within
ISO IBA ISS
(PMID:28561066) GO_REF:0000033 PR:Q8C0J2 (MGI:5605433|PMID:24954904) GO_REF:0000024
RGD GO_Central UniProt
PMID:24954904 PMID:28561066
GO_REF:0000024 GO_REF:0000033 MGI:5605433
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
G
Clu
clusterin
involved_in
ISO IEA
(PMID:9228033) GO_REF:0000107
RGD Ensembl
PMID:9228033
GO_REF:0000107
NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
G
Haus8l2
HAUS augmin-like complex, subunit 8 like 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
G
Hsc70-ps1
heat shock cognate protein 70, pseudogene 1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 2:164,044,226...164,046,344
Ensembl chr 2:164,044,261...164,046,336
G
Hspa8
heat shock protein family A (Hsp70) member 8
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 GO_REF:0000118 (PMID:11559757), (PMID:26212789), (PMID:36586411)
UniProt Ensembl TreeGrafter RGD
PMID:11559757 PMID:26212789 PMID:36586411
GO_REF:0000024 GO_REF:0000107 GO_REF:0000118
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
G
Hspa8-ps23
heat shock protein family A (Hsp70) member 8, pseudogene 23
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr X:32,535,167...32,537,203
Ensembl chr X:32,535,155...32,537,257
G
Lamp2
lysosomal-associated membrane protein 2
involved_in acts_upstream_of_or_within
ISO IBA IEA IGI IMP ISS
(PMID:27628032) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 PMID:18644871 (MGI:5805578|PMID:27628032) GO_REF:0000024
RGD GO_Central TreeGrafter Ensembl UniProt
PMID:27628032 PMID:18644871 PMID:18644871
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5805578 , RGD:10412301 , RGD:10412301
NCBI chr X:117,173,097...117,222,090
Ensembl chr X:117,057,606...117,260,522
G
Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:29420192)
RGD
PMID:29420192
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:22020285)
RGD
PMID:22020285
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
G
Sqstm1
sequestosome 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:27498865), (PMID:36221902), (PMID:37802024)
UniProt RGD
PMID:27498865 PMID:36221902 PMID:37802024
GO_REF:0000024
NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
G
Efnb1
ephrin B1
involved_in acts_upstream_of_positive_effect
IEA ISO
GO_REF:0000107 (PMID:33280498)
Ensembl RGD
PMID:33280498
GO_REF:0000107
NCBI chr X:64,257,351...64,270,158
Ensembl chr X:64,257,351...64,270,157
G
Ephb2
Eph receptor B2
acts_upstream_of_positive_effect
ISO
(PMID:33280498)
RGD
PMID:33280498
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Ift20
intraflagellar transport 20
involved_in
ISO
(MGI:5527012|PMID:24089209)
RGD
PMID:24089209
MGI:5527012
NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
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Ift88
intraflagellar transport 88
involved_in
ISO
(MGI:5527012|PMID:24089209)
RGD
PMID:24089209
MGI:5527012
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
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Mtmr3
myotubularin related protein 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:25578879)
Ensembl RGD
PMID:25578879
GO_REF:0000107
NCBI chr14:79,340,523...79,460,947
Ensembl chr14:79,340,513...79,461,041
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Mtor
mechanistic target of rapamycin kinase
involved_in
ISO IEA
(PMID:23524951) GO_REF:0000107
RGD Ensembl
PMID:23524951
GO_REF:0000107
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Pikfyve
phosphoinositide kinase, FYVE-type zinc finger containing
involved_in
ISO
(PMID:25578879)
RGD
PMID:25578879
NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868
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Rab1b
RAB1B, member RAS oncogene family
involved_in
ISO
(PMID:20545908)
RGD
PMID:20545908
NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868 Ensembl chr X:202,405,759...202,413,868
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RGD1359108
similar to RIKEN cDNA 3110043O21
involved_in
ISO IEA ISS
(PMID:27334615) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27334615
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
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Rnf186
ring finger protein 186
acts_upstream_of_positive_effect
ISO
(PMID:33280498)
RGD
PMID:33280498
NCBI chr 5:151,210,492...151,211,716
Ensembl chr 5:151,210,492...151,211,716
G
Rnf5
ring finger protein 5
acts_upstream_of_or_within
ISO
MGI:3775796 (MGI:5469257|PMID:23093945)
RGD
PMID:23093945
MGI:5469257
NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985
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Tbc1d14
TBC1 domain family, member 14
involved_in
ISO IBA IEA
(PMID:22613832) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:22613832
GO_REF:0000033 GO_REF:0000107
NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183
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Ubqln2
ubiquilin 2
involved_in
ISO
(PMID:20529957)
RGD
PMID:20529957
NCBI chr X:17,853,086...17,856,505
Ensembl chr X:17,853,114...17,856,505
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Atg12
autophagy related 12
involved_in
ISO
(PMID:22342342)
RGD
PMID:22342342
NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
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Atg5
autophagy related 5
involved_in
ISO IEA
(PMID:22342342) GO_REF:0000107
RGD Ensembl
PMID:22342342
GO_REF:0000107
NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209
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Clec16a
C-type lectin domain containing 16A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578
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Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
involved_in
ISO
(MGI:5698740|PMID:26450516)
RGD
PMID:26450516
MGI:5698740
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
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Tbc1d25
TBC1 domain family, member 25
involved_in
ISO IBA
(PMID:21383079) GO_REF:0000033
RGD GO_Central
PMID:21383079
GO_REF:0000033
NCBI chr X:14,314,095...14,339,171
Ensembl chr X:14,314,414...14,338,275
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Tecpr1
tectonin beta-propeller repeat containing 1
involved_in
ISO
(PMID:22342342)
RGD
PMID:22342342
NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
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Atp13a2
ATPase cation transporting 13A2
involved_in
IMP IBA ISO
GO_REF:0000033 (PMID:22186024)
GO_Central RGD
PMID:22186024 PMID:22186024
GO_REF:0000033, RGD:13442482
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
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Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
involved_in
ISO
(MGI:6383362|PMID:25878248)
RGD
PMID:25878248
MGI:6383362
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
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Dnajc16
DnaJ heat shock protein family (Hsp40) member C16
involved_in
ISS ISO
GO_REF:0000024 (PMID:32492081)
UniProt RGD
PMID:32492081
GO_REF:0000024
NCBI chr 5:154,073,372...154,106,246
Ensembl chr 5:154,075,261...154,106,136
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Acer2
alkaline ceramidase 2
involved_in
ISO
(PMID:28294157)
RGD
PMID:28294157
NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614
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Atm
ATM serine/threonine kinase
involved_in
ISO
(PMID:23878245) (MGI:5509101|PMID:23878245)
RGD
PMID:23878245
MGI:5509101
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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Bckdk
branched chain ketoacid dehydrogenase kinase
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633
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Bcl2
BCL2, apoptosis regulator
involved_in
ISO
(MGI:5310718|PMID:22258505)
RGD
PMID:22258505
MGI:5310718
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Becn1
beclin 1
involved_in
ISO
(PMID:16799551), (PMID:18797192)
RGD
PMID:16799551 PMID:18797192
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
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Bok
BCL2 family apoptosis regulator BOK
involved_in
ISO
(PMID:24113155)
RGD
PMID:24113155
NCBI chr 9:94,223,493...94,234,476
Ensembl chr 9:94,223,389...94,234,476
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Casp1
caspase 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2158744 (MGI:5577214|PMID:24581500) GO_REF:0000107
RGD Ensembl
PMID:24581500
GO_REF:0000107 MGI:5577214
NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
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Chmp4b
charged multivesicular body protein 4B
involved_in
ISO
(MGI:3851235|PMID:17683935)
RGD
PMID:17683935
MGI:3851235
NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844
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Cisd1
CDGSH iron sulfur domain 1
involved_in
IEA
GO_REF:0000002 GO_REF:0000104
InterPro UniProt
GO_REF:0000002 GO_REF:0000104
NCBI chr20:17,255,302...17,268,688
Ensembl chr20:17,255,151...17,284,924
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Cisd2
CDGSH iron sulfur domain 2
involved_in
ISO
(PMID:20010695)
RGD
PMID:20010695
NCBI chr 2:223,828,937...223,853,768
Ensembl chr 2:223,828,937...223,868,946
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
involved_in
ISO
(MGI:5784638|PMID:27101989)
RGD
PMID:27101989
MGI:5784638
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
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Cryba1
crystallin, beta A1
IMP
RGD
PMID:21266465
RGD:126925759
NCBI chr10:62,608,373...62,614,726
Ensembl chr10:62,608,383...62,614,726
G
Dcaf12
DDB1 and CUL4 associated factor 12
acts_upstream_of
ISO
(PMID:31267705)
RGD
PMID:31267705
NCBI chr 5:56,460,418...56,482,171
Ensembl chr 5:56,461,006...56,482,456
G
Ddit3
DNA-damage inducible transcript 3
involved_in
IMP
PMID:28694771
UniProt
PMID:28694771
RGD:14390049
NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
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Depp1
DEPP autophagy regulator 1
involved_in
ISO IBA IEA
(PMID:28545464) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:28545464
GO_REF:0000033 GO_REF:0000107
NCBI chr 4:149,910,794...149,913,013
Ensembl chr 4:149,910,779...149,914,542
G
Dram1
DNA-damage regulated autophagy modulator 1
involved_in
ISO IBA
(PMID:19895784) GO_REF:0000033
RGD GO_Central
PMID:19895784
GO_REF:0000033
NCBI chr 7:22,742,794...22,776,888
Ensembl chr 7:22,742,849...22,776,765
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Dram2
DNA damage regulated autophagy modulator 2
involved_in
ISO IEA IBA
(PMID:19895784) GO_REF:0000118 GO_REF:0000033
RGD TreeGrafter GO_Central
PMID:19895784
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403
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Ercc4
ERCC excision repair 4, endonuclease catalytic subunit
acts_upstream_of_or_within
ISO
MGI:3028660 (MGI:3797328|PMID:18443001)
RGD
PMID:18443001
MGI:3797328
NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369
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Fbxl2
F-box and leucine-rich repeat protein 2
involved_in
ISO
(PMID:23604317)
RGD
PMID:23604317
NCBI chr 8:113,916,660...113,965,137
Ensembl chr 8:113,913,373...113,965,066
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Gpr137
G protein-coupled receptor 137
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:204,129,636...204,132,622
Ensembl chr 1:204,129,636...204,133,082
G
Gpr137b
G protein-coupled receptor 137B
involved_in
ISO IBA
(PMID:31036939) GO_REF:0000033
RGD GO_Central
PMID:31036939
GO_REF:0000033
NCBI chr17:86,003,635...86,041,841
Ensembl chr17:85,966,921...86,041,835
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Kat8
lysine acetyltransferase 8
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23863932) GO_REF:0000107
RGD Ensembl
PMID:23863932
GO_REF:0000107
NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
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Keap1
Kelch-like ECH-associated protein 1
involved_in
ISO IEA ISS
(PMID:20452972) GO_REF:0000107 (MGI:4819475|PMID:20421418), (MGI:5009358|PMID:20173742) GO_REF:0000024
RGD Ensembl UniProt
PMID:20173742 PMID:20421418 PMID:20452972
GO_REF:0000024 GO_REF:0000107 MGI:4819475 MGI:5009358
NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862
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Lamp3
lysosomal-associated membrane protein 3
involved_in
ISO
(PMID:25681212)
RGD
PMID:25681212
NCBI chr11:81,153,491...81,224,643
Ensembl chr11:81,193,649...81,221,784
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Lmx1b
LIM homeobox transcription factor 1 beta
involved_in
ISO
(MGI:5645828|PMID:25915474)
RGD
PMID:25915474
MGI:5645828
NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO
(PMID:24211199)
RGD
PMID:24211199
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
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Mapk15
mitogen-activated protein kinase 15
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:22948227)
UniProt Ensembl RGD
PMID:22948227
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645
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Mapt
microtubule-associated protein tau
acts_upstream_of_or_within
ISO
UniProtKB:O15118 (PMID:19074461)
RGD
PMID:19074461
NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
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Mfsd8
major facilitator superfamily domain containing 8
acts_upstream_of_or_within
ISO
MGI:4456699 (MGI:5751614|PMID:26681805)
RGD
PMID:26681805
MGI:5751614
NCBI chr 2:123,822,042...123,847,808
Ensembl chr 2:123,816,614...123,857,971
G
Mtcl1
microtubule crosslinking factor 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 9:106,305,282...106,441,782
Ensembl chr 9:106,321,098...106,442,203
G
Mtcl2
microtubule crosslinking factor 2
involved_in
ISO
(MGI:4837302|PMID:20813965)
RGD
PMID:20813965
MGI:4837302
NCBI chr 3:145,669,102...145,741,578
Ensembl chr 3:145,675,443...145,740,871
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Mtcl3
MTCL family member 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:28,629,036...28,701,416
Ensembl chr 1:28,620,293...28,701,796
G
Mtmr3
myotubularin related protein 3
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr14:79,340,523...79,460,947
Ensembl chr14:79,340,513...79,461,041
G
Mtmr4
myotubularin related protein 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:72,393,411...72,416,342
Ensembl chr10:72,392,551...72,416,342
G
Mtor
mechanistic target of rapamycin kinase
involved_in
ISS ISO
GO_REF:0000024 (MGI:5528770|PMID:24011591)
UniProt RGD
PMID:24011591
GO_REF:0000024 MGI:5528770
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Nlrp6
NLR family, pyrin domain containing 6
acts_upstream_of_or_within involved_in
ISO IEA
MGI:5085850 (MGI:5577214|PMID:24581500) GO_REF:0000107
RGD Ensembl
PMID:24581500
GO_REF:0000107 MGI:5577214
NCBI chr 1:196,004,854...196,011,615
Ensembl chr 1:196,004,953...196,011,113
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Nupr1
nuclear protein 1, transcriptional regulator
involved_in
IMP
PMID:28694771
UniProt
PMID:28694771
RGD:14390049
NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
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Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
involved_in
ISO
(PMID:16799551)
RGD
PMID:16799551
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
G
Pik3r2
phosphoinositide-3-kinase regulatory subunit 2
involved_in
ISO ISS
(PMID:23604317) GO_REF:0000024
RGD UniProt
PMID:23604317
GO_REF:0000024
NCBI chr16:18,665,517...18,674,067
Ensembl chr16:18,665,457...18,674,065
G
Pik3r4
phosphoinositide-3-kinase, regulatory subunit 4
involved_in
ISO
(PMID:16799551)
RGD
PMID:16799551
NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
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Pip4k2a
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
ISS ISO
GO_REF:0000024 (MGI:6159303|PMID:29727621) (PMID:25578879)
UniProt RGD
PMID:25578879 PMID:29727621
GO_REF:0000024 MGI:6159303
NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
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Pip4k2b
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
ISS ISO
GO_REF:0000024 (MGI:6159303|PMID:29727621) (PMID:25578879)
UniProt RGD
PMID:25578879 PMID:29727621
GO_REF:0000024 MGI:6159303
NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
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Pip4k2c
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
involved_in
ISO
(PMID:25578879)
RGD
PMID:25578879
NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078
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Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO ISS
(PMID:20889974) GO_REF:0000024
RGD UniProt
PMID:20889974
GO_REF:0000024
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Pycard
PYD and CARD domain containing
acts_upstream_of_or_within
ISO
MGI:3686870 (MGI:5577214|PMID:24581500)
RGD
PMID:24581500
MGI:5577214
NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
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Rab8a
RAB8A, member RAS oncogene family
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:27103069)
UniProt Ensembl RGD
PMID:27103069
GO_REF:0000024 GO_REF:0000107
NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
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RGD1359108
similar to RIKEN cDNA 3110043O21
involved_in
ISO ISS
(PMID:27103069) (MGI:5810480|PMID:27617292), (MGI:5811684|PMID:27875531), (MGI:5887182|PMID:27193190) GO_REF:0000024
RGD UniProt
PMID:27103069 PMID:27193190 PMID:27617292 PMID:27875531
GO_REF:0000024 MGI:5810480 MGI:5811684 MGI:5887182
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
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Rmc1
regulator of MON1-CCZ1
involved_in
ISO IBA
(PMID:29038162) GO_REF:0000033
RGD GO_Central
PMID:29038162
GO_REF:0000033
NCBI chr18:3,359,848...3,379,764
Ensembl chr18:3,359,832...3,380,795
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Rptor
regulatory associated protein of MTOR, complex 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983
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Smcr8
SMCR8-C9orf72 complex subunit
involved_in
ISO
(PMID:27103069) (MGI:5810480|PMID:27617292)
RGD
PMID:27103069 PMID:27617292
MGI:5810480
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
G
Tpcn2
two pore segment channel 2
involved_in
ISO
UniProtKB:Q5S007 (PMID:22012985)
RGD
PMID:22012985
NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
G
Trib3
tribbles pseudokinase 3
involved_in
IMP
PMID:28694771
UniProt
PMID:28694771
RGD:14390049
NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497
G
Ulk3
unc-51 like kinase 3
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
InterPro GO_Central TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr 8:57,992,396...58,000,220
Ensembl chr 8:57,992,723...57,999,467
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Usp10
ubiquitin specific peptidase 10
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (PMID:21962518)
UniProt GO_Central TreeGrafter Ensembl RGD
PMID:21962518
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897
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Usp13
ubiquitin specific peptidase 13
involved_in
ISO
(PMID:21962518)
RGD
PMID:21962518
NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222
G
Usp33
ubiquitin specific peptidase 33
involved_in
ISO
(PMID:24056301)
RGD
PMID:24056301
NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479
G
Uvrag
UV radiation resistance associated
involved_in
ISO
(PMID:16799551)
RGD
PMID:16799551
NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
G
Vps29
VPS29 retromer complex component
NOT|involved_in
ISO
(PMID:24603492)
RGD
PMID:24603492
NCBI chr12:34,208,911...34,217,977
Ensembl chr12:34,207,263...34,217,964
G
Wac
WW domain containing adaptor with coiled-coil
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
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Wdr24
WD repeat domain 24
involved_in
ISO
(PMID:27166823)
RGD
PMID:27166823
NCBI chr10:14,844,089...14,848,871
Ensembl chr10:14,843,728...14,848,864
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Wdr41
WD repeat domain 41
involved_in
ISO
(PMID:27103069)
RGD
PMID:27103069
NCBI chr 2:26,222,797...26,273,849
Ensembl chr 2:26,224,495...26,273,836
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Xbp1
X-box binding protein 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5573106|PMID:24753614)
UniProt RGD
PMID:24753614
GO_REF:0000024 MGI:5573106
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
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Xpa
XPA, DNA damage recognition and repair factor
acts_upstream_of_or_within
ISO
MGI:1857939 (MGI:3797328|PMID:18443001)
RGD
PMID:18443001
MGI:3797328
NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726
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Zmpste24
zinc metallopeptidase STE24
acts_upstream_of_or_within
ISO
MGI:2180033 (MGI:3797328|PMID:18443001)
RGD
PMID:18443001
MGI:3797328
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
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Gfap
glial fibrillary acidic protein
involved_in
ISO IEA IBA IMP
(PMID:20797626) GO_REF:0000118 GO_REF:0000033 (MGI:4830420|PMID:20797626)
RGD TreeGrafter GO_Central
PMID:20797626 PMID:20797626
GO_REF:0000033 GO_REF:0000118 MGI:4830420 , RGD:10412296
NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
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Atg14
autophagy related 14
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
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Atp13a2
ATPase cation transporting 13A2
involved_in
ISO
(PMID:22198378)
RGD
PMID:22198378
NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
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Atp6v0a1
ATPase H+ transporting V0 subunit a1
involved_in
ISO IEA
(PMID:22982048) GO_REF:0000107
RGD Ensembl
PMID:22982048
GO_REF:0000107
NCBI chr10:85,935,802...85,989,901
Ensembl chr10:85,935,854...85,989,895
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Becn1
beclin 1
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
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Hdac6
histone deacetylase 6
involved_in
ISO
(PMID:16192271)
RGD
PMID:16192271
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
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Pik3c3
phosphatidylinositol 3-kinase, catalytic subunit type 3
involved_in
ISO IEA
(PMID:10625637) GO_REF:0000107
RGD Ensembl
PMID:10625637
GO_REF:0000107
NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
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Pik3r4
phosphoinositide-3-kinase, regulatory subunit 4
involved_in
ISO
(PMID:10625637)
RGD
PMID:10625637
NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
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Prkaa2
protein kinase AMP-activated catalytic subunit alpha 2
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5619439|PMID:23332761) GO_REF:0000107
UniProt RGD Ensembl
PMID:23332761
GO_REF:0000024 GO_REF:0000107 MGI:5619439
NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
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Ubqln1
ubiquilin 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
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Ubqln2
ubiquilin 2
involved_in
ISO IBA
(PMID:20529957) GO_REF:0000033
RGD GO_Central
PMID:20529957
GO_REF:0000033
NCBI chr X:17,853,086...17,856,505
Ensembl chr X:17,853,114...17,856,505
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Ulk1
unc-51 like autophagy activating kinase 1
involved_in
ISO
(PMID:20921139)
RGD
PMID:20921139
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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Adcy10
adenylate cyclase 10
IMP
RGD
PMID:31172217
RGD:329403053
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
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Bnip3l
BCL2 interacting protein 3 like
involved_in
ISO
UniProtKB:Q9Z2F7 (MGI:5616312|PMID:20200478)
RGD
PMID:20200478
MGI:5616312
NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
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Csnk2a2
casein kinase 2 alpha 2
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
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Cttn
cortactin
involved_in
IEA ISO
GO_REF:0000107 (MGI:5616310|PMID:20457763)
Ensembl RGD
PMID:20457763
GO_REF:0000107 MGI:5616310
NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
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Dnm1l
dynamin 1-like
involved_in
ISO
UniProtKB:Q9BXM7 (PMID:19279012)
RGD
PMID:19279012
NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
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Fbxw7
F-box and WD repeat domain containing 7
involved_in
ISO
(PMID:24912190)
RGD
PMID:24912190
NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941
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Fkbp8
FKBP prolyl isomerase 8
involved_in
IEA ISO
GO_REF:0000107 (PMID:28381481), (PMID:31908024)
Ensembl RGD
PMID:28381481 PMID:31908024
GO_REF:0000107
NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
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Fzd5
frizzled class receptor 5
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
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Gsk3a
glycogen synthase kinase 3 alpha
involved_in
IEA ISO
GO_REF:0000107 (PMID:24912190)
Ensembl RGD
PMID:24912190
GO_REF:0000107
NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
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Parl
presenilin associated, rhomboid-like
involved_in
ISO
(MGI:5619462|PMID:21355049)
RGD
PMID:21355049
MGI:5619462
NCBI chr11:80,594,059...80,620,506
Ensembl chr11:80,593,192...80,620,506
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Srebf1
sterol regulatory element binding transcription factor 1
involved_in
ISO
(PMID:24912190)
RGD
PMID:24912190
NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
G
Srebf2
sterol regulatory element binding transcription factor 2
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
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Usp36
ubiquitin specific peptidase 36
involved_in
ISO
(PMID:24912190)
ParkinsonsUK-UCL
PMID:24912190
NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
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Vdac1
voltage-dependent anion channel 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5689082|PMID:25470454)
Ensembl RGD
PMID:25470454
GO_REF:0000107 MGI:5689082
NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
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Atg2a
autophagy related 2A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
G
Atg2b
autophagy related 2B
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
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Atg9a
autophagy related 9A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:76,677,403...76,688,050
Ensembl chr 9:76,677,404...76,687,986
G
Atg9b
autophagy related 9B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
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Ddrgk1
DDRGK domain containing 1
involved_in
ISO
(PMID:32160526)
RGD
PMID:32160526
NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
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Rb1cc1
RB1-inducible coiled-coil 1
acts_upstream_of_or_within involved_in
ISO IBA
MGI:2176173|MGI:3526069 (MGI:6323456|PMID:31006538) GO_REF:0000033
RGD GO_Central
PMID:31006538
GO_REF:0000033 MGI:6323456
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
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Retreg1
reticulophagy regulator 1
involved_in acts_upstream_of_or_within
ISS IEA IBA ISO
GO_REF:0000024 GO_REF:0000118 GO_REF:0000033 GO_REF:0000002 (PMID:26040720), (PMID:31930741) (MGI:6790058|PMID:34338405) (MGI:5646045|PMID:26040720)
GO_Central TreeGrafter InterPro RGD
PMID:26040720 PMID:31930741 PMID:34338405
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5646045 MGI:6790058
NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
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Retreg2
reticulophagy regulator family member 2
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:6790058|PMID:34338405) GO_REF:0000107
RGD Ensembl
PMID:34338405
GO_REF:0000107 MGI:6790058
NCBI chr 9:76,640,282...76,646,400
Ensembl chr 9:76,640,319...76,646,395
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Retreg3
reticulophagy regulator family member 3
acts_upstream_of_or_within involved_in
ISO
(MGI:6790058|PMID:34338405) (PMID:33826365)
RGD
PMID:33826365 PMID:34338405
MGI:6790058
NCBI chr10:86,028,767...86,052,575
Ensembl chr10:86,028,774...86,052,692
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Snx30
sorting nexin family member 30
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631
G
Snx7
sorting nexin 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:205,843,164...205,927,737
Ensembl chr 2:205,842,837...205,927,763
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Sting1
stimulator of interferon response cGAMP interactor 1
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 (MGI:5925643|PMID:29056340)
UniProt GO_Central TreeGrafter RGD
PMID:29056340
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5925643
NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
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Tex264
testis expressed 264
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:31006537), (PMID:31006538) GO_REF:0000033 (PMID:31006538)
RGD GO_Central
PMID:31006537 PMID:31006538
GO_REF:0000033
NCBI chr 8:107,295,806...107,322,858
Ensembl chr 8:107,295,806...107,323,232
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Uba5
ubiquitin-like modifier activating enzyme 5
involved_in
ISO ISS
(PMID:32160526) GO_REF:0000024
RGD UniProt
PMID:32160526
GO_REF:0000024
NCBI chr 8:104,665,241...104,680,915
Ensembl chr 8:104,665,046...104,680,894
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Ufc1
ubiquitin-fold modifier conjugating enzyme 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:32160526)
UniProt RGD
PMID:32160526
GO_REF:0000024
NCBI chr13:83,709,329...83,719,762
Ensembl chr13:83,709,330...83,716,076
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Ufl1
Ufm1-specific ligase 1
involved_in
ISO ISS
(PMID:32160526) GO_REF:0000024
RGD UniProt
PMID:32160526
GO_REF:0000024
NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
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Ufm1
ubiquitin-fold modifier 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:32160526)
UniProt RGD
PMID:32160526
GO_REF:0000024
NCBI chr 2:137,969,476...137,977,620
Ensembl chr 2:137,966,678...137,978,089 Ensembl chr 2:137,966,678...137,978,089
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Ulk3
unc-51 like kinase 3
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 8:57,992,396...58,000,220
Ensembl chr 8:57,992,723...57,999,467
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Armc3
armadillo repeat containing 3
involved_in
ISO
(MGI:6754079|PMID:34428398)
RGD
PMID:34428398
MGI:6754079
NCBI chr17:81,814,087...81,917,534
Ensembl chr17:81,832,518...81,917,531
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Rb1cc1
RB1-inducible coiled-coil 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
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Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
ISO
(PMID:22020285)
RGD
PMID:22020285
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
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Stbd1
starch binding domain 1
involved_in
ISO
MGI:6356543 (MGI:5803726|PMID:27358407), (MGI:7261139|PMID:20810658)
RGD
PMID:20810658 PMID:27358407
MGI:5803726 MGI:7261139
NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443
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Tom1
target of myb1 membrane trafficking protein
involved_in
ISO
(PMID:23023224)
RGD
PMID:23023224
NCBI chr19:13,405,482...13,440,384
Ensembl chr19:13,405,501...13,440,384
G
AABR07025818.1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr16:48,598,506...48,599,444
G
Atg16l1
autophagy related 16-like 1
acts_upstream_of_or_within
ISO
PR:Q80W47 (MGI:5605433|PMID:24954904)
RGD
PMID:24954904
MGI:5605433
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
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Calcoco2
calcium binding and coiled-coil domain 2
involved_in
ISO
(PMID:23022382), (PMID:25771791)
RGD
PMID:23022382 PMID:25771791
NCBI chr10:81,055,467...81,069,298
G
ENSRNOG00000066153
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr10:81,068,011...81,069,397
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Lgals8
galectin 8
involved_in
ISO ISS
(PMID:22246324), (PMID:28077878) GO_REF:0000024
RGD GO_Central
PMID:22246324 PMID:28077878
GO_REF:0000024
NCBI chr17:58,024,652...58,052,764
Ensembl chr17:58,028,105...58,052,764
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Mapk3
mitogen activated protein kinase 3
acts_upstream_of
ISO
MGI:1346858 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
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Nod1
nucleotide-binding oligomerization domain containing 1
acts_upstream_of
ISO
MGI:2674231 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
G
Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of
ISO
MGI:3529594 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
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Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of
ISO
MGI:2660793 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
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Rnf213
ring finger protein 213
involved_in
ISO
(PMID:34012115)
RGD
PMID:34012115
NCBI chr10:104,656,329...104,755,669
Ensembl chr10:104,656,883...104,757,918
G
Tlr2
toll-like receptor 2
acts_upstream_of
ISO
MGI:2674036 (MGI:5299952|PMID:22033934)
RGD
PMID:22033934
MGI:5299952
NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
acts_upstream_of_or_within
ISO
PR:Q8C0J2 (MGI:5605433|PMID:24954904)
RGD
PMID:24954904
MGI:5605433
NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all