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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular catabolic process
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Accession:GO:0044248 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.
Synonyms:exact_synonym: cellular breakdown;   cellular catabolism;   cellular degradation



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10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect ISO (PMID:19933275), (PMID:21238436) RGD PMID:19933275 PMID:21238436 NCBI chr 8:1,453,226...1,463,990
Ensembl chr 8:1,452,282...1,463,966
JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in ISO
IEA
IMP
IDA
(PMID:19933275)
GO_REF:0000117
PMID:10585460
(MGI:6369507|PMID:31624291)
PMID:1848231
RGD
UniProt
PMID:19933275 PMID:31624291 PMID:10585460 PMID:1848231 GO_REF:0000117 MGI:6369507, RGD:150521656, RGD:632027 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465
JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in ISO (PMID:21238436)
(MGI:6489626|PMID:33168096)
RGD PMID:21238436 PMID:33168096 MGI:6489626 NCBI chr 7:20,254,196...20,305,793
Ensembl chr 7:20,254,233...20,305,776
JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phyh phytanoyl-CoA 2-hydroxylase IDA RGD PMID:10588950 RGD:727286 NCBI chr17:73,329,461...73,346,359
Ensembl chr17:73,329,082...73,346,409
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS
(PMID:26489465)
GO_REF:0000024
RGD
UniProt
PMID:26489465 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) RGD PMID:28297718 NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP RGD PMID:20805360 RGD:10042974 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO
ISS
(PMID:16126846), (PMID:28275056)
GO_REF:0000024
RGD
UniProt
PMID:16126846 PMID:28275056 GO_REF:0000024 NCBI chr 9:1,862,555...1,872,301
Ensembl chr 9:1,862,899...1,872,451
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in IBA
ISO
PMID:21873635
(MGI:6105829|PMID:27616329)
(PMID:29180010)
RGD PMID:27616329 PMID:29180010 PMID:21873635 MGI:6105829, RGD:13792537 NCBI chr 5:166,805,309...166,813,339
Ensembl chr 5:166,804,837...166,813,155
JBrowse link
G Qki QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) RGD PMID:20631256 MGI:5316962 NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) RGD PMID:24375645 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) RGD PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28335005) RGD PMID:28335005 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) RGD PMID:23125361 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:24726324), (PMID:26255671) RGD PMID:24726324 PMID:26255671 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671)
PMID:21873635
(PMID:19909337)
UniProt
RGD
PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 More... GO_REF:0000024 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631, RGD:13792537 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) RGD PMID:26134560 MGI:5707103 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA
ISS
(PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499)
GO_REF:0000104
GO_REF:0000024
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233), (MGI:5795824|PMID:17288565)
RGD
UniProt
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... GO_REF:0000024 GO_REF:0000104 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4818820|PMID:20622884), (MGI:5779430|PMID:27102483), (MGI:5784967|PMID:24733888), (MGI:5784968|PMID:24700863), (MGI:5784976|PMID:22701344)
(PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173)
UniProt
RGD
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000024 MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:25106868)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)
RGD PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA
(PMID:22547059)
PMID:21873635
RGD PMID:22547059 PMID:21873635 RGD:13792537 NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493
JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916
JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:10,695,572...10,712,443
Ensembl chr 9:10,695,592...10,712,323
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)
UniProt
RGD
PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 MGI:6105829 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS
(PMID:12034726)
GO_REF:0000024
RGD
UniProt
PMID:12034726 GO_REF:0000024 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO
IBA
(MGI:5306322|PMID:12456657)
PMID:21873635
RGD PMID:12456657 PMID:21873635 MGI:5306322, RGD:13792537 NCBI chr17:6,507,413...6,509,373
Ensembl chr17:6,507,275...6,509,375
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,550...161,814,381
Ensembl chr 3:161,801,577...161,814,381
JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6859910|PMID:29844590)
(PMID:29844590)
(PMID:34160127)
Ensembl
RGD
PMID:29844590 PMID:34160127 GO_REF:0000107 MGI:6859910 NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS
(PMID:15014438)
GO_REF:0000024
RGD
UniProt
PMID:15014438 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) RGD PMID:21998747 NCBI chr 1:240,856,991...240,884,243
Ensembl chr 1:240,857,126...240,884,568
JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tet1 tet methylcytosine dioxygenase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 involved_in ISO (PMID:24315485) RGD PMID:24315485 NCBI chr 2:221,988,645...222,072,813
Ensembl chr 2:221,988,645...222,072,534
JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 4:115,867,412...115,964,433
Ensembl chr 4:115,871,265...115,964,193
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) RGD PMID:17371050 NCBI chr 8:53,979,813...54,008,861
Ensembl chr 8:53,979,813...54,008,855
JBrowse link
G Nudt7 nudix hydrolase 7 acts_upstream_of_or_within
involved_in
ISO (MGI:2137102|PMID:11415433)
(MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520)
RGD PMID:11415433 PMID:18799520 PMID:29378847 MGI:2137102 MGI:6157214 MGI:6450264 NCBI chr19:42,125,679...42,151,198
Ensembl chr19:42,125,711...42,151,081
JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:201,293,660...201,295,233
Ensembl chr 1:201,292,619...201,295,224
JBrowse link
acetylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase involved_in
acts_upstream_of_or_within
IDA
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(MGI:3654414|PMID:16434405), (MGI:65815|PMID:7512968)
(PMID:1517212)
Ensembl
RGD
PMID:1517212 PMID:7512968 PMID:16434405 PMID:16052514 PMID:21873635 More... GO_REF:0000107 MGI:3654414 MGI:65815, RGD:1580870, RGD:13792537, RGD:2301213, RGD:2301207, RGD:2301205, RGD:2301204, RGD:2301203, RGD:2301199, RGD:2301197, RGD:2301195, RGD:2301187 NCBI chr12:19,407,359...19,413,713
Ensembl chr12:19,407,360...19,413,651
JBrowse link
G Bche butyrylcholinesterase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:158,308,674...158,401,148
Ensembl chr 2:158,307,584...158,401,148
JBrowse link
acetylcholine catabolic process in synaptic cleft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase involved_in IC PMID:26820598 SynGO PMID:26820598 RGD:12050110 NCBI chr12:19,407,359...19,413,713
Ensembl chr12:19,407,360...19,413,651
JBrowse link
acylglycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in ISO
ISS
(PMID:22969151)
(MGI:5616317|PMID:18096503)
GO_REF:0000024
RGD
UniProt
PMID:18096503 PMID:22969151 GO_REF:0000024 MGI:5616317 NCBI chr 3:139,659,315...139,719,529
Ensembl chr 3:139,659,317...139,719,564
JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in ISO
IBA
(PMID:26989199)
PMID:21873635
RGD PMID:26989199 PMID:21873635 RGD:13792537 NCBI chr 1:133,217,403...133,298,564
Ensembl chr 1:133,217,375...133,299,061
JBrowse link
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase involved_in ISO
IBA
ISS
(PMID:22969151)
PMID:21873635
(MGI:5616317|PMID:18096503)
GO_REF:0000024
RGD
UniProt
PMID:18096503 PMID:22969151 PMID:21873635 GO_REF:0000024 MGI:5616317, RGD:13792537 NCBI chr15:16,859,740...16,907,094
Ensembl chr15:16,859,738...16,906,985
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISS
ISO
GO_REF:0000024
(MGI:5318031|PMID:15220344)
UniProt
RGD
PMID:15220344 GO_REF:0000024 MGI:5318031 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
JBrowse link
G Lypla2 lysophospholipase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:25301951)
UniProt
RGD
PMID:25301951 GO_REF:0000024 NCBI chr 5:148,198,466...148,203,062
Ensembl chr 5:148,198,439...148,203,092
JBrowse link
G Mgll monoglyceride lipase involved_in ISO
ISS
(PMID:22969151)
(MGI:4836780|PMID:20729846), (MGI:5616317|PMID:18096503)
GO_REF:0000024
RGD
UniProt
PMID:18096503 PMID:20729846 PMID:22969151 GO_REF:0000024 MGI:4836780 MGI:5616317 NCBI chr 4:121,192,187...121,294,187
Ensembl chr 4:121,192,195...121,294,179
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt11 nudix hydrolase 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:16,326,775...16,333,396
Ensembl chr  X:16,326,598...16,333,145
JBrowse link
G Nudt3 nudix hydrolase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,634,345...5,686,950
Ensembl chr20:5,634,349...5,686,874
JBrowse link
G Nudt4 nudix hydrolase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:30,188,100...30,204,620
Ensembl chr 7:30,188,100...30,204,615
JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within
ISS
IBA
IMP
ISO
GO_REF:0000024
PMID:21873635
(MGI:4835158|PMID:8672487), (MGI:6478540|PMID:16742956), (MGI:6478860|PMID:8064675)
(PMID:8894685)
(PMID:16670267)
MGI:1857117|MGI:2155977|MGI:2681791|MGI:2683027 (MGI:1095761|PMID:9272950), (MGI:1861066|PMID:10899903), (MGI:2151677|PMID:11591798), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3531253|PMID:8663040), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:72798|PMID:7731963), (MGI:74163|PMID:7670465), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
UniProt
RGD
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 More... GO_REF:0000024 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:4835158 MGI:49990 MGI:59127 MGI:6478540 MGI:6478860 MGI:72798 MGI:74163 MGI:76875 MGI:83255, RGD:13792537, RGD:152995394 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adal adenosine deaminase-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:108,101,857...108,119,557
Ensembl chr 3:108,101,857...108,118,516
JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:7,709,233...7,718,925
Ensembl chr12:7,709,312...7,718,923
JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
IDA
ISO
GO_REF:0000107
PMID:1619276
(PMID:1619276)
MGI:2448161 (MGI:2447927|PMID:12502743), (MGI:49329|PMID:1590774), (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
Ensembl
RGD
PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 More... GO_REF:0000107 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533, RGD:127285395 NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) RGD PMID:28746349 MGI:5917829 NCBI chr 1:164,884,823...164,929,899
Ensembl chr 1:164,885,320...164,929,887
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO MGI:2182811 (MGI:3760051|PMID:17502665) RGD PMID:17502665 MGI:3760051 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Nt5e 5' nucleotidase, ecto involved_in IEA
ISO
GO_REF:0000107
MGI:3522017 (MGI:5917829|PMID:28746349), (MGI:6478084|PMID:20430891)
Ensembl
RGD
PMID:20430891 PMID:28746349 GO_REF:0000107 MGI:5917829 MGI:6478084 NCBI chr 8:89,271,046...89,314,918
Ensembl chr 8:89,270,696...89,314,881
JBrowse link
G Nudt9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) RGD PMID:11825615 MGI:2158549 NCBI chr14:5,675,376...5,693,332
Ensembl chr14:5,675,382...5,693,142
JBrowse link
aflatoxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr7a3 aldo-keto reductase family 7 member A3 IMP RGD PMID:12727802 RGD:1304380 NCBI chr 5:151,590,968...151,601,394
Ensembl chr 5:151,584,479...151,601,394
JBrowse link
G Gsta3 glutathione S-transferase alpha 3 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:4430389 (MGI:4429761|PMID:19850059)
GO_REF:0000107
RGD
Ensembl
PMID:19850059 GO_REF:0000107 MGI:4429761 NCBI chr 9:23,658,574...23,684,240
Ensembl chr 9:23,658,574...23,684,240
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 IMP RGD PMID:27071940 RGD:12910550 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acbd5 acyl-CoA binding domain containing 5 NOT|involved_in ISO (PMID:24535825) RGD PMID:24535825 NCBI chr17:85,206,178...85,248,909
Ensembl chr17:85,206,303...85,248,215
JBrowse link
G Atg5 autophagy related 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5751672|PMID:22982048)
(PMID:22982048)
Ensembl
RGD
PMID:22982048 GO_REF:0000107 MGI:5751672 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO
IBA
ISS
UniProtKB:Q562E7 (PMID:28404643)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:28404643 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21143716)
Ensembl
UniProt
RGD
PMID:21143716 GO_REF:0000024 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Wdfy3 WD repeat and FYVE domain containing 3 involved_in ISO
IBA
(PMID:20168092), (PMID:20417604)
PMID:21873635
RGD PMID:20168092 PMID:20417604 PMID:21873635 RGD:13792537 NCBI chr14:7,578,245...7,810,491
Ensembl chr14:7,606,628...7,810,482
JBrowse link
G Wdr81 WD repeat domain 81 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28404643)
UniProt
RGD
PMID:28404643 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:60,281,969...60,295,374
Ensembl chr10:60,281,972...60,295,296
JBrowse link
aldehyde catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588122|PMID:15769935)
GO_REF:0000002
RGD
InterPro
PMID:15769935 GO_REF:0000002 MGI:3588122 NCBI chr 5:130,092,945...130,130,277
Ensembl chr 5:130,092,732...130,113,674
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member involved_in ISO
ISS
(PMID:20062057), (PMID:27521998)
GO_REF:0000024
RGD
UniProt
PMID:20062057 PMID:27521998 GO_REF:0000024 NCBI chr12:34,949,549...34,982,527
Ensembl chr12:34,901,219...34,982,521
JBrowse link
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 acts_upstream_of_or_within ISO (PMID:20699116) RGD PMID:20699116 NCBI chr 1:201,145,309...201,162,675
Ensembl chr 1:201,145,309...201,163,921
JBrowse link
alkaloid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 involved_in ISO (PMID:15039299) RGD PMID:15039299 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759
JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in ISO (PMID:15039299) RGD PMID:15039299 NCBI chr12:9,207,986...9,230,038
Ensembl chr12:9,015,383...9,285,008
JBrowse link
G Cyp3a9 cytochrome P450, family 3, subfamily a, polypeptide 9 involved_in ISO (PMID:15039299) RGD PMID:15039299 NCBI chr12:16,806,222...16,846,428
Ensembl chr12:16,806,207...16,846,422
JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Allc allantoicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:45,179,181...45,214,275
Ensembl chr 6:45,179,187...45,214,223
JBrowse link
amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfa electron transfer flavoprotein subunit alpha involved_in ISO (PMID:25416781) RGD PMID:25416781 NCBI chr 8:55,835,115...55,891,890
Ensembl chr 8:55,835,134...55,891,969
JBrowse link
G Etfb electron transfer flavoprotein subunit beta involved_in ISO (PMID:25416781) RGD PMID:25416781 NCBI chr 1:93,851,908...93,866,072
Ensembl chr 1:93,851,858...93,866,068
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:95,299,457...95,324,564
Ensembl chr 1:95,295,601...95,324,562
JBrowse link
G Lao1 L-amino acid oxidase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:132,573,698...132,583,591
Ensembl chr 5:132,573,698...132,583,582
JBrowse link
G Pcca propionyl-CoA carboxylase subunit alpha TAS RGD PMID:2745462 RGD:633579 NCBI chr15:99,627,955...99,969,555
Ensembl chr15:99,627,982...99,968,266
JBrowse link
G Pccb propionyl-CoA carboxylase subunit beta TAS RGD PMID:3464942 RGD:633580 NCBI chr 8:101,591,218...101,641,213
Ensembl chr 8:101,590,737...101,641,234
JBrowse link
G RGD1308564 similar to L-amino acid oxidase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:42,459,948...42,477,215
Ensembl chr10:42,459,781...42,477,177
JBrowse link
amino-acid betaine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742
JBrowse link
G Dmgdh dimethylglycine dehydrogenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:24,912,600...24,987,533
Ensembl chr 2:24,912,578...24,987,528
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (MGI:6478860|PMID:8064675) RGD PMID:8064675 MGI:6478860 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in TAS
ISO
MGI:4364610 (MGI:5917829|PMID:28746349) RGD PMID:28746349 PMID:9291127 MGI:5917829, RGD:632203 NCBI chr 1:164,884,823...164,929,899
Ensembl chr 1:164,885,320...164,929,887
JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) RGD PMID:11133996 NCBI chr 5:135,473,107...135,494,400
Ensembl chr 5:135,473,231...135,499,338
JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) RGD PMID:11690631 MGI:2153435 NCBI chr 6:33,139,053...33,156,489
Ensembl chr 6:33,139,064...33,156,481
JBrowse link
G Nt5e 5' nucleotidase, ecto acts_upstream_of_or_within
involved_in
IDA
IMP
ISO
IBA
IEA
MGI:3522017 (MGI:3770326|PMID:16547283)
MGI:3522017 (MGI:5917829|PMID:28746349), (MGI:6478084|PMID:20430891)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:16547283 PMID:20430891 PMID:28746349 PMID:21414400 PMID:30269308 More... GO_REF:0000107 MGI:3770326 MGI:5917829 MGI:6478084, RGD:5134346, RGD:152995394, RGD:13792537 NCBI chr 8:89,271,046...89,314,918
Ensembl chr 8:89,270,696...89,314,881
JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:7,709,233...7,718,925
Ensembl chr12:7,709,312...7,718,923
JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(PMID:1619276)
(MGI:6478860|PMID:8064675)
Ensembl
RGD
PMID:1619276 PMID:8064675 GO_REF:0000107 MGI:6478860 NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
JBrowse link
amyloid-beta clearance by cellular catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6271506|PMID:27472885)
UniProt
RGD
PMID:27472885 GO_REF:0000024 MGI:6271506 NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425
JBrowse link
G Cd36 CD36 molecule involved_in IBA
IEA
IMP
ISO
PMID:21873635
GO_REF:0000107
PMID:18941241
(PMID:18941241)
Ensembl
RGD
PMID:18941241 PMID:21873635 PMID:18941241 GO_REF:0000107, RGD:13792537, RGD:13825436 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cd36-ps1 CD36 molecule, pseudogene 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,487,837...17,514,900 JBrowse link
G Ide insulin degrading enzyme involved_in IMP
ISO
PMID:18941241
(PMID:23525105)
RGD PMID:23525105 PMID:18941241 RGD:13825436 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440
JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (MGI:5902678|PMID:22383525) RGD PMID:22383525 MGI:5902678 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO
IBA
(PMID:23152628), (PMID:24305823)
PMID:21873635
UniProtKB:P05067|UniProtKB:P49768 (MGI:5465209|PMID:23152628), (MGI:5529723|PMID:24305823), (MGI:5897551|PMID:21289173)
RGD PMID:21289173 PMID:23152628 PMID:24305823 PMID:21873635 MGI:5465209 MGI:5529723 MGI:5897551, RGD:13792537 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (PMID:18289866) RGD PMID:18289866 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Mme membrane metallo-endopeptidase involved_in ISO
IEA
IMP
UniProtKB:P05067 (PMID:15100223), (PMID:24825898)
GO_REF:0000107
PMID:18941241
RGD
Ensembl
PMID:15100223 PMID:24825898 PMID:18941241 GO_REF:0000107, RGD:13825436 NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:33097708)
(MGI:6313424|PMID:30617257), (MGI:6393391|PMID:31980586), (MGI:6695864|PMID:31134514)
RGD PMID:30617257 PMID:31134514 PMID:31980586 PMID:33097708 MGI:6313424 MGI:6393391 MGI:6695864 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:159,540,718...159,553,639
Ensembl chr 5:159,540,715...159,553,633
JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
IBA
GO_REF:0000002
(PMID:15572351)
(PMID:22253444)
GO_REF:0000107
PMID:21873635
InterPro
RGD
Ensembl
PMID:15572351 PMID:22253444 PMID:11425895 PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:628524, RGD:13792537 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628
JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dnase1l3 deoxyribonuclease 1-like 3 acts_upstream_of_or_within
involved_in
TAS
ISO
IBA
(MGI:2385551|PMID:12050166)
PMID:21873635
(PMID:23229555)
RGD PMID:12050166 PMID:23229555 PMID:9665719 PMID:21873635 MGI:2385551, RGD:728743, RGD:13792537 NCBI chr15:16,922,335...16,948,322
Ensembl chr15:16,922,335...16,948,317
JBrowse link
G Dnase2 deoxyribonuclease 2, lysosomal involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:23,244,661...23,247,329
Ensembl chr19:23,244,664...23,247,376
JBrowse link
G Dnase2b deoxyribonuclease 2 beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:235,470,915...235,515,211
Ensembl chr 2:235,470,919...235,486,295
JBrowse link
G Endog endonuclease G involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3034030|MGI:3514265 (MGI:3029597|PMID:14663139)
RGD PMID:14663139 PMID:21873635 MGI:3029597, RGD:13792537 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Exog exo/endonuclease G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:119,184,974...119,204,819
Ensembl chr 8:119,185,136...119,204,672
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:16153597) RGD PMID:16153597 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in ISO
IEA
MGI:1857091 (MGI:3622894|PMID:11403940)
GO_REF:0000107
RGD
Ensembl
PMID:11403940 GO_REF:0000107 MGI:3622894 NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) RGD PMID:24895913 NCBI chr 2:234,667,499...234,800,322
Ensembl chr 2:234,667,491...234,799,339
JBrowse link
G Fah fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2155424|MGI:2155425 (MGI:1929783|PMID:11209059)
Ensembl
RGD
PMID:11209059 GO_REF:0000107 MGI:1929783 NCBI chr 1:138,548,830...138,571,599
Ensembl chr 1:138,548,834...138,571,505
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in IBA
IDA
PMID:21873635
PMID:1383204
GO_Central
BHF-UCL
PMID:21873635 PMID:1383204 RGD:13792537, RGD:8553334 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO
IEA
IBA
(PMID:7504305)
GO_REF:0000107
(MGI:3807772|PMID:1383204)
PMID:21873635
RGD
Ensembl
PMID:1383204 PMID:7504305 PMID:21873635 GO_REF:0000107 MGI:3807772, RGD:13792537 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO
IBA
IEA
(PMID:1378832), (PMID:7488039)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:1378832 PMID:7488039 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15753084 PMID:21873635 RGD:8693655, RGD:13792537 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Arg2 arginase 2 involved_in TAS
IBA
IDA
PMID:21873635 RGD
GO_Central
PMID:14871882 PMID:21873635 PMID:15753084 RGD:1358311, RGD:13792537, RGD:8693655 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682
JBrowse link
arginine deiminase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi3 peptidyl arginine deiminase 3 NAS RGD PMID:9192727 RGD:69926 NCBI chr 5:153,089,717...153,117,146
Ensembl chr 5:153,089,717...153,117,146
JBrowse link
aromatic compound catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 involved_in IEA GO_REF:0000043
GO_REF:0000104
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr13:92,714,315...92,744,124
Ensembl chr13:92,714,315...92,790,235
JBrowse link
G Pon1 paraoxonase 1 involved_in ISO (PMID:15772423) RGD PMID:15772423 NCBI chr 4:33,294,737...33,325,759
Ensembl chr 4:33,294,722...33,321,360
JBrowse link
G Pon2 paraoxonase 2 involved_in ISO (PMID:15772423) RGD PMID:15772423 NCBI chr 4:33,389,702...33,425,186
Ensembl chr 4:33,389,714...33,425,248
JBrowse link
G Pon3 paraoxonase 3 involved_in ISO (PMID:15772423) RGD PMID:15772423 NCBI chr 4:33,356,983...33,383,681
Ensembl chr 4:33,349,168...33,383,855
JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C IDA RGD PMID:10037450 RGD:2317075 NCBI chr 9:88,739,577...88,808,465
Ensembl chr 9:88,713,184...88,808,465
JBrowse link
G Ugt2b35 UDP glucuronosyltransferase 2 family, polypeptide B35 IDA RGD PMID:7574722 RGD:729992 NCBI chr14:20,853,441...20,891,039
Ensembl chr14:20,853,587...20,891,037
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
IBA
IDA
ISO
PMID:21873635
PMID:12753071
(PMID:19839645)
RGD PMID:19839645 PMID:21873635 PMID:12753071 PMID:12753071 RGD:13792537, RGD:1299508, RGD:1299508 NCBI chr 1:206,006,103...206,027,115
Ensembl chr 1:206,006,109...206,027,108
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in IBA
ISO
PMID:21873635
(PMID:9163533)
RGD PMID:9163533 PMID:21873635 RGD:13792537 NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:2241899) RGD PMID:2241899 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in IBA
ISO
PMID:21873635
(PMID:2567216)
RGD PMID:2567216 PMID:21873635 RGD:13792537 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:20921139), (PMID:25215947) RGD PMID:20921139 PMID:25215947 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 involved_in ISO
ISS
(PMID:29180427)
GO_REF:0000024
RGD
UniProt
PMID:29180427 GO_REF:0000024 NCBI chr12:17,049,766...17,055,954
Ensembl chr12:17,049,777...17,058,026
JBrowse link
G Arsg arylsulfatase G involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:94,412,261...94,551,224
Ensembl chr10:94,447,399...94,542,941
JBrowse link
G Atg101 autophagy related 101 involved_in ISO
IBA
(PMID:19225151), (PMID:19597335)
PMID:21873635
(MGI:6810791|PMID:19225151)
RGD PMID:19225151 PMID:19597335 PMID:21873635 MGI:6810791, RGD:13792537 NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633
JBrowse link
G Atg12 autophagy related 12 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000002
(MGI:2137756|PMID:11266458)
InterPro
RGD
PMID:11266458 PMID:21873635 GO_REF:0000002 MGI:2137756, RGD:13792537 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg13 autophagy related 13 acts_upstream_of_or_within
involved_in
ISO (PMID:19211835)
(MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151)
(PMID:19211835), (PMID:19225151)
RGD PMID:19211835 PMID:19225151 PMID:19258318 MGI:3849242 MGI:6810791 NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
JBrowse link
G Atg14 autophagy related 14 involved_in IBA
ISO
PMID:21873635
(PMID:19270696)
RGD PMID:19270696 PMID:21873635 RGD:13792537 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atg16l1 autophagy related 16-like 1 involved_in IBA
ISO
PMID:21873635
(MGI:2137756|PMID:11266458)
RGD PMID:11266458 PMID:21873635 MGI:2137756, RGD:13792537 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
JBrowse link
G Atg16l2 autophagy related 16-like 2 involved_in
NOT|involved_in
IBA
ISO
PMID:21873635
(MGI:2137756|PMID:11266458)
(MGI:6436405|PMID:22082872)
RGD PMID:11266458 PMID:22082872 PMID:21873635 MGI:2137756 MGI:6436405, RGD:13792537 NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
JBrowse link
G Atg2a autophagy related 2A involved_in ISO
IBA
(PMID:28561066)
PMID:21873635
RGD PMID:28561066 PMID:21873635 RGD:13792537 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
JBrowse link
G Atg2b autophagy related 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
JBrowse link
G Atg3 autophagy related 3 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
(MGI:4835103|PMID:20723759)
(MGI:4880808|PMID:21220506)
GO_REF:0000024
RGD
UniProt
PMID:20723759 PMID:21220506 PMID:21873635 GO_REF:0000024 MGI:4835103 MGI:4880808, RGD:13792537 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase involved_in ISO (MGI:5630037|PMID:25578879) RGD PMID:25578879 MGI:5630037 NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IMP
ISO
IBA
(MGI:2137756|PMID:11266458)
(MGI:5500861|PMID:23704209)
PMID:21873635
RGD PMID:11266458 PMID:23704209 PMID:16420522 PMID:21873635 MGI:2137756 MGI:5500861, RGD:1643189, RGD:13792537 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5500861|PMID:23704209)
(MGI:4420830|PMID:20080761)
RGD PMID:20080761 PMID:23704209 PMID:21873635 MGI:4420830 MGI:5500861, RGD:13792537 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within
involved_in
ISO
ISS
MGI:4417824 (MGI:5494547|PMID:22456507), (MGI:5509287|PMID:23402761)
GO_REF:0000024
(PMID:29180427), (PMID:29437695), (PMID:32513819), (PMID:33468622)
(PMID:15755735), (PMID:22456507)
RGD
UniProt
PMID:15755735 PMID:22456507 PMID:23402761 PMID:29180427 PMID:29437695 More... GO_REF:0000024 MGI:5494547 MGI:5509287 NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atg9b autophagy related 9B acts_upstream_of_or_within ISO (PMID:15755735) RGD PMID:15755735 NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Bag3 BAG cochaperone 3 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Becn1 beclin 1 involved_in IMP
ISO
ISS
IBA
(MGI:5619439|PMID:23332761)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:23332761 PMID:16420522 PMID:21873635 GO_REF:0000024 MGI:5619439, RGD:1643189, RGD:13792537 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Becn2 beclin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,843,528...87,892,343
Ensembl chr13:87,844,531...87,845,787
JBrowse link
G Ctsd cathepsin D acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3057045|PMID:15452145)
GO_REF:0000107
RGD
Ensembl
PMID:15452145 GO_REF:0000107 MGI:3057045 NCBI chr 1:197,527,467...197,539,343
Ensembl chr 1:197,527,467...197,539,488
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in IBA
ISO
PMID:21873635
(PMID:21072319)
RGD PMID:21072319 PMID:21873635 RGD:13792537 NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
JBrowse link
G Emc6 ER membrane protein complex subunit 6 involved_in ISO
IBA
(PMID:23182941)
PMID:21873635
RGD PMID:23182941 PMID:21873635 RGD:13792537 NCBI chr10:57,794,072...57,795,671
Ensembl chr10:57,793,685...57,796,217
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:2182627 (MGI:5913112|PMID:24430976) RGD PMID:24430976 MGI:5913112 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G Gabarapl3 GABA type A receptor associated protein like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:89,246,175...89,247,132
Ensembl chr 8:89,246,195...89,247,139
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:16888103)
(MGI:3656111|PMID:16888103)
RGD PMID:16888103 MGI:3656111 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G LOC120098596 gamma-aminobutyric acid receptor-associated protein-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:55,052,756...55,053,109
Ensembl chr19:55,052,756...55,053,109
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in ISO
IDA
IBA
(PMID:24290141)
PMID:11060023
PMID:21873635
RGD PMID:24290141 PMID:11060023 PMID:21873635 RGD:8554284, RGD:13792537 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
JBrowse link
G Nsfl1c NSFL1 cofactor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
JBrowse link
G Pacs2 phosphofurin acidic cluster sorting protein 2 acts_upstream_of_or_within ISO (PMID:23455425) RGD PMID:23455425 NCBI chr 6:132,096,992...132,156,702
Ensembl chr 6:132,096,901...132,154,583
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
(MGI:5565574|PMID:24098492)
PMID:21873635
RGD PMID:24098492 PMID:12453151 PMID:21873635 MGI:5565574, RGD:2303129, RGD:13792537 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:2149116 (MGI:3057045|PMID:15452145) RGD PMID:15452145 MGI:3057045 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Rab19 RAB19, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:68,157,159...68,166,889
Ensembl chr 4:68,156,881...68,166,886
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO
ISS
IBA
(PMID:22939626)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:22939626 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
JBrowse link
G Rab1b RAB1B, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO
IBA
(PMID:22452336)
PMID:21873635
RGD PMID:22452336 PMID:21873635 RGD:13792537 NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
JBrowse link
G Rab33b RAB33B, member RAS oncogene family involved_in ISO (MGI:5447922|PMID:18448665) RGD PMID:18448665 MGI:5447922 NCBI chr 2:135,528,116...135,538,719
Ensembl chr 2:135,528,116...135,538,719
JBrowse link
G Rab43 RAB43, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,249,878...120,269,174
Ensembl chr 4:120,249,879...120,269,174
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:19956673) RGD PMID:19956673 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA
ISO
PMID:21873635
(MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151)
(PMID:19225151), (PMID:28890335)
RGD PMID:19225151 PMID:19258318 PMID:28890335 PMID:21873635 MGI:3849242 MGI:6810791, RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Rufy4 RUN and FYVE domain containing 4 involved_in IBA
ISO
PMID:21873635
(PMID:26416964)
RGD PMID:26416964 PMID:21873635 RGD:13792537 NCBI chr 9:75,702,937...75,727,719
Ensembl chr 9:75,703,750...75,723,525
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IBA
ISS
(PMID:30568238), (PMID:30842662)
(MGI:6305034|PMID:30568238)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:30568238 PMID:30842662 PMID:21873635 GO_REF:0000024 MGI:6305034, RGD:13792537 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Stx12 syntaxin 12 involved_in ISO (PMID:24095276) RGD PMID:24095276 NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377
JBrowse link
G Synpo2 synaptopodin 2 involved_in IMP PMID:23434281 UniProt PMID:23434281 RGD:12793031 NCBI chr 2:211,217,099...211,371,267
Ensembl chr 2:211,216,783...211,371,267
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (MGI:6296816|PMID:23908015) RGD PMID:23908015 MGI:6296816 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tmem41b transmembrane protein 41B involved_in ISS
ISO
GO_REF:0000024
(PMID:30093494), (PMID:30126924), (PMID:30933966)
UniProt
RGD
PMID:30093494 PMID:30126924 PMID:30933966 GO_REF:0000024 NCBI chr 1:164,012,585...164,026,967
Ensembl chr 1:164,012,592...164,026,933
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 involved_in ISO
IEA
ISS
IBA
(PMID:19056683)
GO_REF:0000107
GO_REF:0000024
PMID:21873635
RGD
Ensembl
UniProt
PMID:19056683 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:20529957)
Ensembl
RGD
PMID:20529957 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ubqln2 ubiquilin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:17,853,086...17,856,505
Ensembl chr  X:17,853,114...17,856,505
JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,884,253...27,912,709
Ensembl chr 6:27,884,680...27,912,649
JBrowse link
G Ubxn2b UBX domain protein 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IBA
ISO
PMID:21873635
(MGI:3849242|PMID:19258318), (MGI:6810791|PMID:19225151)
(PMID:19225151), (PMID:28890335)
RGD PMID:19225151 PMID:19258318 PMID:28890335 PMID:21873635 MGI:3849242 MGI:6810791, RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISO
ISS
(PMID:28890335), (PMID:30093494), (PMID:30933966)
GO_REF:0000024
RGD
UniProt
PMID:28890335 PMID:30093494 PMID:30933966 GO_REF:0000024 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISO
IEA
ISS
(PMID:28561066)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28561066 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wdr45b WD repeat domain 45B involved_in ISO (PMID:28561066) RGD PMID:28561066 NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:28561066) RGD PMID:28561066 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:20505359), (PMID:28561066), (PMID:28890335)
UniProt
RGD
PMID:20505359 PMID:28561066 PMID:28890335 GO_REF:0000024 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 involved_in ISO (PMID:10625637) RGD PMID:10625637 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:10625637) RGD PMID:10625637 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr11:3,338,007...3,364,357
Ensembl chr11:3,337,494...3,385,181
JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO
IEA
(PMID:17984323)
GO_REF:0000107
RGD
Ensembl
PMID:17984323 GO_REF:0000107 NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin acts_upstream_of_or_within ISO MGI:2388888 (MGI:3690270|PMID:16714284) RGD PMID:16714284 MGI:3690270 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5505596 (MGI:5488852|PMID:23479740)
RGD PMID:23479740 PMID:21873635 MGI:5488852, RGD:13792537 NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5805578|PMID:27628032)
PMID:21873635
UniProt
RGD
PMID:27628032 PMID:21873635 GO_REF:0000024 MGI:5805578, RGD:13792537 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G Lix1 limb and CNS expressed 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:58,128,961...58,187,554
Ensembl chr 1:58,128,961...58,185,964
JBrowse link
G Lix1l limb and CNS expressed 1 like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:184,136,018...184,161,918
Ensembl chr 2:184,136,038...184,161,916
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in ISO
IBA
(PMID:28223137)
PMID:21873635
RGD PMID:28223137 PMID:21873635 RGD:13792537 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISO
IBA
(PMID:28223137)
PMID:21873635
RGD PMID:28223137 PMID:21873635 RGD:13792537 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 acts_upstream_of_or_within ISO MGI:3794204 (MGI:4839416|PMID:20600908) RGD PMID:20600908 MGI:4839416 NCBI chr12:1,560,341...1,574,252
Ensembl chr12:1,560,359...1,574,252
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (MGI:6155546|PMID:29514215) RGD PMID:29514215 MGI:6155546 NCBI chr 2:123,822,042...123,882,913
Ensembl chr 2:123,816,614...123,857,971
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in ISO (PMID:10625637) RGD PMID:10625637 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in ISO (PMID:10625637) RGD PMID:10625637 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Rubcnl rubicon like autophagy enhancer involved_in ISO
IBA
(PMID:28306502), (PMID:30704899)
(MGI:6282647|PMID:30704899)
PMID:21873635
RGD PMID:28306502 PMID:30704899 PMID:21873635 MGI:6282647, RGD:13792537 NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
JBrowse link
G Snap29 synaptosome associated protein 29 involved_in ISS
ISO
GO_REF:0000024
(PMID:23217709)
UniProt
RGD
PMID:23217709 GO_REF:0000024 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (MGI:4879078|PMID:20920792), (MGI:5504339|PMID:22797916) RGD PMID:20920792 PMID:22797916 MGI:4879078 MGI:5504339 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Snx14 sorting nexin 14 involved_in ISO
IBA
(PMID:25848753)
PMID:21873635
RGD PMID:25848753 PMID:21873635 RGD:13792537 NCBI chr 8:89,283,673...89,390,597
Ensembl chr 8:89,298,114...89,390,580
JBrowse link
G Stx17 syntaxin 17 involved_in ISO
ISS
(PMID:23217709), (PMID:24554770), (PMID:28306502)
GO_REF:0000024
RGD
UniProt
PMID:23217709 PMID:24554770 PMID:28306502 GO_REF:0000024 NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:22342342)
UniProt
RGD
PMID:22342342 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:23459205)
Ensembl
RGD
PMID:23459205 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:28306502) RGD PMID:28306502 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 NOT|involved_in ISO (PMID:23217709) RGD PMID:23217709 NCBI chr12:16,728,477...16,764,261
Ensembl chr12:16,728,524...16,764,097
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 involved_in ISO
ISS
(PMID:23217709)
GO_REF:0000024
RGD
UniProt
PMID:23217709 GO_REF:0000024 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
JBrowse link
G Vcp valosin-containing protein involved_in ISO
IBA
ISS
(PMID:20104022)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20104022 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog NOT|involved_in ISO (PMID:25783203) RGD PMID:25783203 NCBI chr 6:106,888,284...106,913,139
Ensembl chr 6:106,888,284...106,913,117
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:25783203) RGD PMID:25783203 NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in ISO
IEA
(PMID:24554770), (PMID:25783203)
GO_REF:0000107
RGD
Ensembl
PMID:24554770 PMID:25783203 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393
JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated NOT|involved_in ISO (PMID:25783203) RGD PMID:25783203 NCBI chr 1:134,223,967...134,247,232
Ensembl chr 1:134,223,949...134,246,970
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B NOT|involved_in ISO (PMID:23217709) RGD PMID:23217709 NCBI chr 6:97,957,700...97,976,491
Ensembl chr 6:97,961,346...97,976,465
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 NOT|involved_in ISO (PMID:20505359) RGD PMID:20505359 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
autophagosome membrane docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 involved_in ISO (PMID:25686604) RGD PMID:25686604 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISO
ISS
(PMID:28890335)
GO_REF:0000024
RGD
UniProt
PMID:28890335 GO_REF:0000024 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Calm1 calmodulin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Snap29 synaptosome associated protein 29 involved_in ISO (PMID:25686604) RGD PMID:25686604 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
JBrowse link
G Stx17 syntaxin 17 involved_in ISO (PMID:25686604) RGD PMID:25686604 NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 involved_in ISO
IEA
(PMID:25686604)
GO_REF:0000107
RGD
Ensembl
PMID:25686604 GO_REF:0000107 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:28890335)
UniProt
RGD
PMID:28890335 GO_REF:0000024 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
JBrowse link
autophagosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:22186024) RGD PMID:22186024 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha acts_upstream_of_or_within ISO MGI:2685045 (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta acts_upstream_of_or_within ISO MGI:1203729 (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612
JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO (PMID:25365221) RGD PMID:25365221 NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
JBrowse link
G Ulk3 unc-51 like kinase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:57,992,396...58,000,220
Ensembl chr 8:57,992,723...57,999,467
JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 acts_upstream_of_or_within ISO (PMID:25365221) RGD PMID:25365221 NCBI chr 6:98,031,874...98,095,538
Ensembl chr 6:98,032,520...98,095,480
JBrowse link
autophagosome-endosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rubcnl rubicon like autophagy enhancer involved_in ISO
IBA
(PMID:28306502)
PMID:21873635
RGD PMID:28306502 PMID:21873635 RGD:13792537 NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
JBrowse link
autophagosome-lysosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISO
ISS
(PMID:28325809)
GO_REF:0000024
RGD
UniProt
PMID:28325809 GO_REF:0000024 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO
IBA
(PMID:30538141)
PMID:21873635
(MGI:6273736|PMID:30538141)
RGD PMID:30538141 PMID:21873635 MGI:6273736, RGD:13792537 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:5698740|PMID:26450516) RGD PMID:26450516 MGI:5698740 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:6159303|PMID:29727621)
UniProt
Ensembl
RGD
PMID:29727621 GO_REF:0000024 GO_REF:0000107 MGI:6159303 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:6159303|PMID:29727621)
UniProt
RGD
PMID:29727621 GO_REF:0000024 MGI:6159303 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 involved_in ISO
ISS
(PMID:28325809)
GO_REF:0000024
RGD
UniProt
PMID:28325809 GO_REF:0000024 NCBI chr10:88,313,837...88,366,182
Ensembl chr10:88,314,651...88,362,412
JBrowse link
G Rubcnl rubicon like autophagy enhancer involved_in ISO
IBA
(PMID:28306502)
PMID:21873635
RGD PMID:28306502 PMID:21873635 RGD:13792537 NCBI chr15:50,332,458...50,377,494
Ensembl chr15:50,332,418...50,400,849
JBrowse link
G Tom1 target of myb1 membrane trafficking protein involved_in ISO (PMID:23023224) RGD PMID:23023224 NCBI chr19:13,405,482...13,440,384
Ensembl chr19:13,405,501...13,440,384
JBrowse link
G Vps39 VPS39 subunit of HOPS complex involved_in ISO (PMID:33422265) RGD PMID:33422265 NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
JBrowse link
autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001519.1 involved_in IEA GO_REF:0000043
GO_REF:0000104
UniProt GO_REF:0000043 GO_REF:0000104
G Ambra1 autophagy and beclin 1 regulator 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3715977 (MGI:3715542|PMID:17589504)
PMID:21873635
RGD PMID:17589504 PMID:21873635 MGI:3715542, RGD:13792537 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Anxa7 annexin A7 involved_in ISO (PMID:24007983) RGD PMID:24007983 NCBI chr15:3,821,798...3,849,659
Ensembl chr15:3,821,845...3,849,385
JBrowse link
G Arsa arylsulfatase A IDA RGD PMID:8037 RGD:1599235 NCBI chr 7:120,542,788...120,547,577
Ensembl chr 7:120,543,362...120,548,783
JBrowse link
G Arsb arylsulfatase B IDA RGD PMID:8037 RGD:1599235 NCBI chr 2:25,002,210...25,162,675
Ensembl chr 2:25,002,346...25,162,671
JBrowse link
G Atg10 autophagy related 10 involved_in ISO (PMID:15657430), (PMID:17256008) RGD PMID:15657430 PMID:17256008 NCBI chr 2:22,109,304...22,398,313
Ensembl chr 2:22,108,426...22,398,233
JBrowse link
G Atg101 autophagy related 101 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633
JBrowse link
G Atg12 autophagy related 12 IMP RGD PMID:18059433 RGD:2301217 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg14 autophagy related 14 involved_in ISO (MGI:4438180|PMID:19270696), (MGI:5619471|PMID:19270693) RGD PMID:19270693 PMID:19270696 MGI:4438180 MGI:5619471 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atg16l2 autophagy related 16-like 2 NOT|involved_in ISO (MGI:6436405|PMID:22082872) RGD PMID:22082872 MGI:6436405 NCBI chr 1:155,687,386...155,703,419
Ensembl chr 1:155,684,564...155,703,420
JBrowse link
G Atg2b autophagy related 2B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
JBrowse link
G Atg3 autophagy related 3 involved_in IEP
IEA
GO_REF:0000043 UniProt
RGD
PMID:17110912 GO_REF:0000043, RGD:1643237 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg4a autophagy related 4A, cysteine peptidase involved_in ISO (PMID:30661429) RGD PMID:30661429 NCBI chr  X:104,665,345...104,765,271
Ensembl chr  X:104,665,345...104,765,268
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase involved_in ISO
IEA
(PMID:18387192), (PMID:26378241), (PMID:27527864), (PMID:28821708)
GO_REF:0000043
(MGI:4829568|PMID:20577052)
RGD
UniProt
PMID:18387192 PMID:20577052 PMID:26378241 PMID:27527864 PMID:28821708 GO_REF:0000043 MGI:4829568 NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
JBrowse link
G Atg4c autophagy related 4C, cysteine peptidase involved_in ISO (PMID:30661429) RGD PMID:30661429 NCBI chr 5:113,867,218...113,935,534
Ensembl chr 5:113,867,092...113,934,830
JBrowse link
G Atg4d autophagy related 4D, cysteine peptidase involved_in ISO (PMID:30661429) RGD PMID:30661429 NCBI chr 8:19,807,733...19,817,321
Ensembl chr 8:19,807,766...19,817,321
JBrowse link
G Atg5 autophagy related 5 involved_in IMP
ISO
ISS
UniProtKB:O95352 (PMID:26812546), (PMID:28389568)
(MGI:2137756|PMID:11266458), (MGI:5509101|PMID:23878245)
GO_REF:0000024
RGD
UniProt
PMID:11266458 PMID:23878245 PMID:26812546 PMID:28389568 PMID:18059433 GO_REF:0000024 MGI:2137756 MGI:5509101, RGD:2301217 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000043
UniProtKB:Q9H1Y0 (PMID:20543840), (PMID:24681637), (PMID:28389568)
(PMID:25327288)
(MGI:4420830|PMID:20080761), (MGI:6208175|PMID:29937374)
MGI:2137515|MGI:2176052|MGI:2176073|MGI:3587769|MGI:3587771 (MGI:3587473|PMID:15866887), (MGI:3653078|PMID:16885219), (MGI:3711608|PMID:17450150), (MGI:3722981|PMID:17726112), (MGI:4829568|PMID:20577052)
UniProt
RGD
PMID:15866887 PMID:16885219 PMID:17450150 PMID:17726112 PMID:20080761 More... GO_REF:0000024 GO_REF:0000043 MGI:3587473 MGI:3653078 MGI:3711608 MGI:3722981 MGI:4420830 MGI:4829568 MGI:6208175 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:4417824 (MGI:4414713|PMID:19926846)
GO_REF:0000043
(MGI:6791812|PMID:27587839)
RGD
UniProt
PMID:19926846 PMID:27587839 GO_REF:0000043 MGI:4414713 MGI:6791812 NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:27278822)
(MGI:5881999|PMID:27278822)
RGD PMID:27278822 MGI:5881999 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Bcas3 BCAS3, microtubule associated cell migration factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:70,213,710...70,673,080
Ensembl chr10:70,214,098...70,673,080
JBrowse link
G Becn1 beclin 1 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
ISS
GO_REF:0000117
(PMID:28747345)
(PMID:23184933), (PMID:23629966), (PMID:24056303)
(MGI:5490676|PMID:23629966), (MGI:5619437|PMID:23364696)
(MGI:2385984|PMID:12372286), (MGI:3715542|PMID:17589504)
GO_REF:0000024
UniProt
RGD
PMID:12372286 PMID:17589504 PMID:23184933 PMID:23364696 PMID:23629966 More... GO_REF:0000024 GO_REF:0000117 MGI:2385984 MGI:3715542 MGI:5490676 MGI:5619437, RGD:1643194, RGD:11558011 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Becn2 beclin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:23954414)
MGI:5550535 (MGI:5528919|PMID:23954414)
RGD PMID:23954414 MGI:5528919 NCBI chr13:87,843,528...87,892,343
Ensembl chr13:87,844,531...87,845,787
JBrowse link
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr11:3,338,007...3,364,357
Ensembl chr11:3,337,494...3,385,181
JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:17984323), (PMID:24095276) RGD PMID:17984323 PMID:24095276 NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:17984323) RGD PMID:17984323 NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
JBrowse link
G Cltc clathrin heavy chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Creg1 cellular repressor of E1A-stimulated genes 1 acts_upstream_of_or_within ISO MGI:7384603 (MGI:6854654|PMID:33966596) RGD PMID:33966596 MGI:6854654 NCBI chr13:78,019,814...78,032,310
Ensembl chr13:78,019,843...78,032,308
JBrowse link
G Ctsb cathepsin B IEP RGD PMID:18567942 RGD:2315511 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
JBrowse link
G Dap death-associated protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752
JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403
JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:26649942 RGD:13506953 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd3 dopamine receptor D3 IMP RGD PMID:26649942 RGD:13506953 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Ei24 EI24, autophagy associated transmembrane protein acts_upstream_of_or_within ISO MGI:2176173|MGI:5475023 (MGI:5468390|PMID:23074225) RGD PMID:23074225 MGI:5468390 NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571
JBrowse link
G ENSRNOG00000062718 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 1:206,501,714...206,508,984 JBrowse link
G ENSRNOG00000063835 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 5:69,986,346...69,986,519 JBrowse link
G ENSRNOG00000067112 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 3:91,539,051...91,540,059 JBrowse link
G ENSRNOG00000069013 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr16:39,727,789...39,729,234 JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO MGI:5505596 (MGI:5488852|PMID:23479740) RGD PMID:23479740 MGI:5488852 NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:2182627 (MGI:5607479|PMID:24914213) RGD PMID:24914213 MGI:5607479 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Fnbp1l formin binding protein 1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:210,647,241...210,748,203
Ensembl chr 2:210,647,246...210,738,455
JBrowse link
G Foxo1 forkhead box O1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G Gabarapl3 GABA type A receptor associated protein like 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:89,246,175...89,247,132
Ensembl chr 8:89,246,195...89,247,139
JBrowse link
G Gba glucosylceramidase beta involved_in
acts_upstream_of_or_within
ISO (PMID:27378698)
(MGI:5501380|PMID:23707074)
(MGI:5817293|PMID:27378698)
RGD PMID:23707074 PMID:27378698 MGI:5501380 MGI:5817293 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Gramd1a GRAM domain containing 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:86,367,001...86,393,348
Ensembl chr 1:86,367,001...86,393,336
JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of ISO MGI:3613033 (MGI:4461108|PMID:20041218) RGD PMID:20041218 MGI:4461108 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hmgb1-ps4 high-mobility group box 1, pseudogene 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:222,796,925...222,798,187
Ensembl chr 1:222,796,915...222,798,193
JBrowse link
G Hmgb1-ps8 high-mobility group box 1, pseudogene 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:34,028,487...34,030,715
Ensembl chr16:34,028,446...34,030,648
JBrowse link
G Hmgb1l1 high mobility group box 1-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:55,045,885...55,047,145
Ensembl chr19:55,045,869...55,047,145
JBrowse link
G Itgb4 integrin subunit beta 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:24007983)
Ensembl
RGD
PMID:24007983 GO_REF:0000107 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in ISO (MGI:3038873|PMID:12221139) RGD PMID:12221139 MGI:3038873 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G LOC100363472 nuclear receptor-binding factor 2-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:8,984,365...8,986,171
Ensembl chr14:8,984,410...8,986,166
JBrowse link
G LOC108348989 high mobility group protein B1 pseudogene involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:79,815,176...79,816,529
Ensembl chr 1:79,815,269...79,816,511
JBrowse link
G LOC108349189 high mobility group protein B1 pseudogene involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:107,671,273...107,672,015
Ensembl chr  X:107,671,272...107,672,535
JBrowse link
G LOC120099223 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:71,363,515...71,364,393
Ensembl chr  X:71,363,531...71,364,790
JBrowse link
G LOC690000 similar to CG3740-PA involved_in ISO (PMID:26136767) RGD PMID:26136767 NCBI chr 1:90,873,542...90,887,205
Ensembl chr 1:90,873,549...90,886,208
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IDA RGD PMID:16420522 RGD:1643189 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISO
IEA
(PMID:23629966)
(MGI:5490676|PMID:23629966)
GO_REF:0000043
RGD
UniProt
PMID:23629966 GO_REF:0000043 MGI:5490676 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:5819191|PMID:26147524), (MGI:6219748|PMID:26607664) RGD PMID:26147524 PMID:26607664 MGI:5819191 MGI:6219748 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3808349 (MGI:5607479|PMID:24914213) RGD PMID:24914213 MGI:5607479 NCBI chr17:17,674,375...17,675,565
Ensembl chr17:17,674,319...17,677,148
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO UniProtKB:P10636 (PMID:19074461) RGD PMID:19074461 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Nrbf2 nuclear receptor binding factor 2 involved_in ISO
IEA
IBA
(PMID:24785657)
GO_REF:0000002
(MGI:5634877|PMID:24849286)
PMID:21873635
RGD
InterPro
PMID:24785657 PMID:24849286 PMID:21873635 GO_REF:0000002 MGI:5634877, RGD:13792537 NCBI chr20:21,308,606...21,326,878
Ensembl chr20:21,308,576...21,326,818
JBrowse link
G Optn optineurin involved_in IEA GO_REF:0000104
GO_REF:0000043
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Phf23 PHD finger protein 23 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 acts_upstream_of_or_within ISO (PMID:25327288) RGD PMID:25327288 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:88,313,837...88,366,182
Ensembl chr10:88,314,651...88,362,412
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217|MGI:2447704 (MGI:3575390|PMID:14627652), (MGI:3701167|PMID:17174099), (MGI:5605930|PMID:25014022) RGD PMID:14627652 PMID:17174099 PMID:25014022 MGI:3575390 MGI:3701167 MGI:5605930 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA GO_REF:0000043
GO_REF:0000104
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1930934 (MGI:3044229|PMID:15123735) RGD PMID:15123735 MGI:3044229 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO
ISS
(PMID:22939626)
GO_REF:0000024
RGD
UniProt
PMID:22939626 GO_REF:0000024 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:54,088,744...54,105,756
Ensembl chr 8:54,088,129...54,106,483
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 acts_upstream_of_or_within
involved_in
ISO MGI:2176173|MGI:3526069 (MGI:6323456|PMID:31006538)
(MGI:3796758|PMID:18443221)
RGD PMID:18443221 PMID:31006538 MGI:3796758 MGI:6323456 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Retreg1 reticulophagy regulator 1 acts_upstream_of_or_within ISO (MGI:6370289|PMID:31446166) RGD PMID:31446166 MGI:6370289 NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 involved_in ISO
IEA
ISS
IBA
(PMID:24549040)
GO_REF:0000107
GO_REF:0000024
PMID:21873635
RGD
Ensembl
UniProt
PMID:24549040 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G RGD1560263 similar to nuclear receptor binding factor 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:182,253,957...182,256,611
Ensembl chr 2:182,254,732...182,255,595
JBrowse link
G RGD1563668 similar to High mobility group protein 1 (HMG-1) involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:39,768,658...39,769,408
Ensembl chr10:39,768,658...39,769,293
JBrowse link
G Rnf166 ring finger protein 166 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:50,529,434...50,539,274
Ensembl chr19:50,529,434...50,539,274
JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864
JBrowse link
G Rubcn rubicon autophagy regulator involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
JBrowse link
G S100a8 S100 calcium binding protein A8 involved_in ISS
ISO
GO_REF:0000024
(PMID:19935772)
UniProt
RGD
PMID:19935772 GO_REF:0000024 NCBI chr 2:176,166,517...176,167,645
Ensembl chr 2:176,167,124...176,167,643
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19935772)
Ensembl
UniProt
RGD
PMID:19935772 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230
JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273
JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:69,665,757...69,727,199
Ensembl chr13:69,684,291...69,727,196
JBrowse link
G Sirt2 sirtuin 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Sqstm1 sequestosome 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4819475|PMID:20421418), (MGI:5009358|PMID:20173742)
(PMID:17580304), (PMID:20452972)
UniProt
RGD
PMID:17580304 PMID:20173742 PMID:20421418 PMID:20452972 GO_REF:0000024 MGI:4819475 MGI:5009358 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Srpx sushi-repeat-containing protein, X-linked acts_upstream_of_or_within ISO MGI:3706175 (MGI:3852261|PMID:19368996) RGD PMID:19368996 MGI:3852261 NCBI chr  X:12,676,984...12,751,296
Ensembl chr  X:12,566,645...12,747,882
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
JBrowse link
G Stk35 serine/threonine kinase 35 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:117,016,819...117,049,131
Ensembl chr 3:117,016,950...117,048,066
JBrowse link
G Syt11 synaptotagmin 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:5881999|PMID:27278822)
(PMID:27278822)
UniProt
RGD
PMID:27278822 GO_REF:0000024 MGI:5881999 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Tbc1d5 TBC1 domain family, member 5 involved_in ISO (PMID:22354992) RGD PMID:22354992 NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (MGI:6296816|PMID:23908015) RGD PMID:23908015 MGI:6296816 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 involved_in ISO
ISS
(PMID:21575909)
GO_REF:0000024
RGD
UniProt
PMID:21575909 GO_REF:0000024 NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
JBrowse link
G Tgfbrap1 transforming growth factor, beta receptor associated protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:45,320,930...45,371,329
Ensembl chr 9:45,320,930...45,371,311
JBrowse link
G Tm9sf1 transmembrane 9 superfamily member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:29,127,585...29,135,349
Ensembl chr15:29,127,584...29,135,349
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:130,512,428...130,543,637
Ensembl chr 7:130,527,316...130,543,633
JBrowse link
G Tmem39a transmembrane protein 39a involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
JBrowse link
G Tollip toll interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:196,961,585...196,984,252
Ensembl chr 1:196,950,771...196,983,625
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:23629966) RGD PMID:23629966 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trappc4 trafficking protein particle complex subunit 4 involved_in ISO
IEA
ISS
(PMID:31794024)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:31794024 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:44,729,458...44,733,285
Ensembl chr 8:44,725,331...44,733,491
JBrowse link
G Trim17 tripartite motif-containing 17 involved_in ISO (PMID:25127057) RGD PMID:25127057 NCBI chr10:43,743,111...43,750,929
Ensembl chr10:43,740,604...43,750,919
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:25127057) RGD PMID:25127057 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:3796758|PMID:18443221), (MGI:5285135|PMID:21258367)
UniProtKB:Q8IYT8 (PMID:17595159), (PMID:18936157), (PMID:28389568)
RGD PMID:17595159 PMID:18443221 PMID:18936157 PMID:21258367 PMID:28389568 MGI:3796758 MGI:5285135 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in ISO (MGI:3796758|PMID:18443221)
UniProtKB:O75385 (PMID:18936157), (PMID:28389568)
RGD PMID:18443221 PMID:18936157 PMID:28389568 MGI:3796758 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
G Ulk3 unc-51 like kinase 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 8:57,992,396...58,000,220
Ensembl chr 8:57,992,723...57,999,467
JBrowse link
G Umod uromodulin acts_upstream_of_or_within ISO (MGI:6107740|PMID:28990932) RGD PMID:28990932 MGI:6107740 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302
JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897
JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:24056303) RGD PMID:24056303 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS
(PMID:20104022), (PMID:25125609)
GO_REF:0000024
RGD
UniProt
PMID:20104022 PMID:25125609 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISO
IBA
IDA
(PMID:28890335)
PMID:21873635
(MGI:3768504|PMID:17940279)
RGD PMID:17940279 PMID:28890335 PMID:21873635 PMID:17940279 MGI:3768504, RGD:13792537, RGD:8554414 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:44,683,768...44,698,572
Ensembl chr 8:44,684,127...44,698,568
JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A acts_upstream_of_or_within ISO (PMID:25996471) RGD PMID:25996471 NCBI chr 1:213,901,999...214,128,638
Ensembl chr 1:213,901,999...214,128,555
JBrowse link
G Vps39 VPS39 subunit of HOPS complex involved_in ISO
IBA
(PMID:24554770)
PMID:21873635
RGD PMID:24554770 PMID:21873635 RGD:13792537 NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in ISO (PMID:20685960) RGD PMID:20685960 NCBI chr 1:203,360,434...203,370,295
Ensembl chr 1:203,360,440...203,370,430
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in ISO (PMID:24095276) RGD PMID:24095276 NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000043
(PMID:23435086)
UniProt
RGD
PMID:23435086 GO_REF:0000024 GO_REF:0000043 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:15602573), (PMID:17618624) RGD PMID:15602573 PMID:17618624 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO UniProtKB:O60260|UniProtKB:Q99MQ3 (PMID:25215947) RGD PMID:25215947 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atg12 autophagy related 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg2a autophagy related 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
JBrowse link
G Atg2b autophagy related 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:124,522,283...124,592,412
Ensembl chr 6:124,525,523...124,592,015
JBrowse link
G Atg3 autophagy related 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg5 autophagy related 5 involved_in IEA
ISO
IBA
GO_REF:0000107
(MGI:3796473|PMID:18281291)
PMID:21873635
Ensembl
RGD
PMID:18281291 PMID:21873635 GO_REF:0000107 MGI:3796473, RGD:13792537 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
ISO
IBA
UniProtKB:Q9BXM7 (PMID:19279012)
(MGI:4420830|PMID:20080761)
(MGI:5529208|PMID:23981124)
PMID:21873635
RGD PMID:19279012 PMID:20080761 PMID:23981124 PMID:21873635 MGI:4420830 MGI:5529208, RGD:13792537 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atg9a autophagy related 9A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:76,677,403...76,688,035
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atg9b autophagy related 9B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,784,934...10,793,832
Ensembl chr 4:10,786,114...10,793,651
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:25215947)
(MGI:3796473|PMID:18281291)
RGD PMID:18281291 PMID:25215947 MGI:3796473 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Capn10 calpain 10 IMP RGD PMID:22568896 RGD:7247732 NCBI chr 9:93,498,132...93,510,494
Ensembl chr 9:93,498,478...93,510,494
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:25217637) RGD PMID:25217637 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 involved_in IBA
ISO
PMID:21873635
(MGI:3845412|PMID:19451219)
RGD PMID:19451219 PMID:21873635 MGI:3845412, RGD:13792537 NCBI chr 2:223,828,937...223,853,768
Ensembl chr 2:223,828,937...223,868,946
JBrowse link
G Ctsk cathepsin K involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 2:183,058,586...183,069,551
Ensembl chr 2:183,058,569...183,069,550
JBrowse link
G Fbxl4 F-box and leucine-rich repeat protein 4 acts_upstream_of_or_within ISO MGI:6514034 (MGI:6511561|PMID:32525278)
(PMID:32525278)
RGD PMID:32525278 MGI:6511561 NCBI chr 5:35,955,801...36,029,446
Ensembl chr 5:35,955,812...36,029,443
JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO
ISS
(PMID:23933751)
GO_REF:0000024
RGD
UniProt
PMID:23933751 GO_REF:0000024 NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
JBrowse link
G Fis1 fission, mitochondrial 1 involved_in ISO
IBA
(PMID:18515060)
PMID:21873635
RGD PMID:18515060 PMID:21873635 RGD:13792537 NCBI chr12:19,708,558...19,723,392
Ensembl chr12:19,708,558...19,723,377
JBrowse link
G Fundc1 FUN14 domain containing 1 involved_in
acts_upstream_of_or_within
ISO
IBA
ISS
(PMID:22267086)
UniProtKB:Q9H492 (PMID:22267086)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22267086 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:5,083,635...5,100,293
Ensembl chr  X:5,083,617...5,100,284
JBrowse link
G Fundc2 FUN14 domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:128,473...138,232
Ensembl chr18:132,248...138,345
JBrowse link
G Fundc2b FUN14 domain containing 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:123,877,836...123,880,083
Ensembl chr 2:123,877,709...123,880,126
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G Gabarapl3 GABA type A receptor associated protein like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:89,246,175...89,247,132
Ensembl chr 8:89,246,195...89,247,139
JBrowse link
G LOC120098596 gamma-aminobutyric acid receptor-associated protein-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:55,052,756...55,053,109
Ensembl chr19:55,052,756...55,053,109
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha acts_upstream_of_or_within
involved_in
ISO
IBA
UniProtKB:Q8IVP5 (PMID:22267086)
PMID:21873635
RGD PMID:22267086 PMID:21873635 RGD:13792537 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISO
IBA
UniProtKB:Q9BXM7 (PMID:19279012)
PMID:21873635
RGD PMID:19279012 PMID:21873635 RGD:13792537 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO
IEA
IBA
(PMID:20798600), (PMID:23933751), (PMID:24896179)
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:20798600 PMID:23933751 PMID:24896179 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19783904 RGD:10059673 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IBA
ISS
ISO
IDA
PMID:21873635
GO_REF:0000024
(PMID:19029340), (PMID:23933751), (PMID:24896179), (PMID:25621951)
PMID:20457763
ParkinsonsUK-UCL
RGD
UniProt
PMID:19029340 PMID:23933751 PMID:24896179 PMID:25621951 PMID:21873635 More... GO_REF:0000024, RGD:13792537, RGD:10047224 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6358090 (MGI:5921109|PMID:28934388) RGD PMID:28934388 MGI:5921109 NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314
JBrowse link
G Snx30 sorting nexin family member 30 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631
JBrowse link
G Snx7 sorting nexin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:205,843,164...205,927,737
Ensembl chr 2:205,842,837...205,927,763
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
G Usp30 ubiquitin specific peptidase 30 involved_in ISO (PMID:24896179), (PMID:25621951) RGD PMID:24896179 PMID:25621951 NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616
JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
autophagy of nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg3 autophagy related 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:55,624,928...55,653,212
Ensembl chr11:55,624,917...55,653,224
JBrowse link
G Atg5 autophagy related 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
autophagy of peroxisome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07046657.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 5:1,451,326...1,453,094 JBrowse link
G Acbd5 acyl-CoA binding domain containing 5 involved_in IEA
ISO
GO_REF:0000002
(PMID:24535825)
InterPro
RGD
PMID:24535825 GO_REF:0000002 NCBI chr17:85,206,178...85,248,909
Ensembl chr17:85,206,303...85,248,215
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 IDA RGD PMID:2768248 RGD:1599052 NCBI chr 6:104,077,975...104,098,636
Ensembl chr 6:104,077,979...104,098,656
JBrowse link
bile acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
bilirubin conjugation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 TAS RGD PMID:11829457 RGD:70480 NCBI chr 9:88,801,344...88,808,465
Ensembl chr 9:88,713,184...88,808,465
JBrowse link
biphenyl catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 IDA RGD PMID:16006569 RGD:1600442 NCBI chr 9:88,801,344...88,808,465
Ensembl chr 9:88,713,184...88,808,465
JBrowse link
G Ugt2b17 UDP glucuronosyltransferase family 2 member B17 IDA RGD PMID:16006569 RGD:1600442 NCBI chr14:21,024,035...21,035,784
Ensembl chr14:21,024,006...21,035,986
JBrowse link
bradykinin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme involved_in IMP
ISO
IEA
IDA
(PMID:4962200)
(PMID:4322742), (PMID:6055465), (PMID:7683654)
GO_REF:0000107
RGD
Ensembl
PMID:4322742 PMID:4962200 PMID:6055465 PMID:7683654 PMID:11299220 More... GO_REF:0000107, RGD:7401264, RGD:8142366 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
JBrowse link
G Cpn1 carboxypeptidase N subunit 1 IMP RGD PMID:11299220 RGD:7401264 NCBI chr 1:242,844,575...242,873,465
Ensembl chr 1:242,844,212...242,873,465
JBrowse link
G Ctsh cathepsin H involved_in ISO
IEA
ISS
(PMID:15127951)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15127951 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:90,608,941...90,627,824
Ensembl chr 8:90,608,941...90,627,824
JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in ISO (PMID:18039931) RGD PMID:18039931 NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
JBrowse link
G Ide insulin degrading enzyme involved_in ISO
ISS
(PMID:17613531), (PMID:21185309)
GO_REF:0000024
RGD
UniProt
PMID:17613531 PMID:21185309 GO_REF:0000024 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440
JBrowse link
G Mme membrane metallo-endopeptidase involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:6349683)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:6349683 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
JBrowse link
G Xpnpep1 X-prolyl aminopeptidase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:18515364)
UniProt
RGD
PMID:18515364 GO_REF:0000024 NCBI chr 1:252,001,366...252,052,077
Ensembl chr 1:252,001,367...252,051,479
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) RGD PMID:14755340 MGI:3027291 NCBI chr 4:177,964,834...178,046,573
Ensembl chr 4:177,964,834...178,046,597
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within IDA
ISO
MGI:3028726 (MGI:3027291|PMID:14755340) RGD PMID:14755340 PMID:11733007 MGI:3027291, RGD:1582175 NCBI chr 1:96,040,407...96,060,008
Ensembl chr 1:96,042,625...96,060,007
JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha involved_in TAS
IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:3593587), (PMID:7883996)
GO_REF:0000024
Ensembl
RGD
HGNC-UCL
PMID:3593587 PMID:7883996 PMID:2822716 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:631719, RGD:13792537 NCBI chr 1:81,138,946...81,167,765
Ensembl chr 1:81,138,947...81,167,862
JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
PMID:21873635
GO_REF:0000107
(PMID:2022752), (PMID:3593587)
HGNC-UCL
Ensembl
RGD
PMID:2022752 PMID:3593587 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 8:84,845,264...85,027,812
Ensembl chr 8:84,845,264...85,027,812
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in TAS
IDA
PMID:1377677 RGD
HGNC-UCL
PMID:11562470 PMID:1377677 RGD:68918, RGD:68712 NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Dbt dihydrolipoamide branched chain transacylase E2 involved_in ISO (PMID:3593587) RGD PMID:3593587 NCBI chr 2:204,481,744...204,510,612
Ensembl chr 2:204,481,737...204,510,609
JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in ISO (PMID:3593587) RGD PMID:3593587 NCBI chr 6:47,904,153...47,924,814
Ensembl chr 6:47,903,914...47,924,795
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) RGD PMID:7640268 NCBI chr 3:105,851,710...105,872,144
Ensembl chr 3:105,851,683...105,872,575
JBrowse link
G Slc25a44 solute carrier family 25, member 44 involved_in ISO (PMID:31435015)
(MGI:6359503|PMID:31435015)
RGD PMID:31435015 MGI:6359503 NCBI chr 2:173,868,317...173,883,137
Ensembl chr 2:173,868,320...173,883,020
JBrowse link
brexanolone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b6 hydroxysteroid (17-beta) dehydrogenase 6 involved_in ISO
ISS
(PMID:10896656), (PMID:11360992)
GO_REF:0000024
RGD
UniProt
PMID:10896656 PMID:11360992 GO_REF:0000024 NCBI chr 7:422,466...442,008
Ensembl chr 7:422,480...442,425
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acads acyl-CoA dehydrogenase short chain involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:3968063 PMID:21873635 RGD:2317678, RGD:13792537 NCBI chr12:41,493,650...41,502,897
Ensembl chr12:41,493,626...41,502,898
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO
ISS
(MGI:6157214|PMID:29378847)
GO_REF:0000024
RGD
UniProt
PMID:29378847 GO_REF:0000024 MGI:6157214 NCBI chr 1:88,214,475...88,226,072
Ensembl chr 1:88,214,480...88,226,207
JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520) RGD PMID:18799520 PMID:29378847 MGI:6157214 MGI:6450264 NCBI chr19:42,125,679...42,151,198
Ensembl chr19:42,125,711...42,151,081
JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:201,293,660...201,295,233
Ensembl chr 1:201,292,619...201,295,224
JBrowse link
calcitonin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ece1 endothelin converting enzyme 1 involved_in ISO (PMID:18039931) RGD PMID:18039931 NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde10a phosphodiesterase 10A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:51,765,743...52,218,086
Ensembl chr 1:51,770,132...52,216,563
JBrowse link
G Pde4a phosphodiesterase 4A involved_in IEA
ISO
IDA
GO_REF:0000041
(MGI:1927461|PMID:11267656)
PMID:21323643
(PMID:18095939)
(PMID:9677330)
(PMID:7888306)
(PMID:11306681)
PMID:8557632
UniProt
RGD
PMID:7888306 PMID:9677330 PMID:11267656 PMID:11306681 PMID:18095939 More... GO_REF:0000041 MGI:1927461, RGD:151356649, RGD:633604 NCBI chr 8:19,706,649...19,751,937
Ensembl chr 8:19,703,290...19,751,961
JBrowse link
G Pde4b phosphodiesterase 4B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:116,799,827...117,367,707
Ensembl chr 5:116,799,971...117,367,696
JBrowse link
G Pde4c phosphodiesterase 4C involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:18,690,727...18,711,555
Ensembl chr16:18,691,700...18,710,640
JBrowse link
G Pde4d phosphodiesterase 4D involved_in IEA
ISO
GO_REF:0000041
(PMID:20819076)
UniProt
RGD
PMID:20819076 GO_REF:0000041 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
JBrowse link
G Pde7a phosphodiesterase 7A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:101,714,767...101,806,853
Ensembl chr 2:101,718,444...101,806,681
JBrowse link
G Pde8a phosphodiesterase 8A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:135,166,143...135,288,986
Ensembl chr 1:135,166,237...135,288,024
JBrowse link
G Pde8b phosphodiesterase 8B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:26,275,117...26,479,725
Ensembl chr 2:26,276,635...26,509,209
JBrowse link
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad8 acyl-CoA dehydrogenase family, member 8 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 8:25,382,271...25,406,429
Ensembl chr 8:25,382,273...25,406,414
JBrowse link
G Acad9 acyl-CoA dehydrogenase family, member 9 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:118,943,170...118,966,150
Ensembl chr 2:118,943,174...118,966,547
JBrowse link
G Acads acyl-CoA dehydrogenase short chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr12:41,493,650...41,502,897
Ensembl chr12:41,493,626...41,502,898
JBrowse link
G Acadsb acyl-CoA dehydrogenase, short/branched chain involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:186,188,939...186,227,796
Ensembl chr 1:186,188,987...186,230,379
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:105,851,710...105,872,144
Ensembl chr 3:105,851,683...105,872,575
JBrowse link
G Pon1 paraoxonase 1 involved_in ISO (PMID:7638166) RGD PMID:7638166 NCBI chr 4:33,294,737...33,325,759
Ensembl chr 4:33,294,722...33,321,360
JBrowse link
G Pon3 paraoxonase 3 involved_in ISO (PMID:15772423) RGD PMID:15772423 NCBI chr 4:33,356,983...33,383,681
Ensembl chr 4:33,349,168...33,383,855
JBrowse link
carnitine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (MGI:1321427|PMID:9861014) RGD PMID:9861014 MGI:1321427 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220
JBrowse link
carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in ISO
IBA
ISS
(PMID:11401432), (PMID:17951468), (PMID:24668807)
PMID:21873635
GO_REF:0000024
(MGI:1931377|PMID:11092891), (MGI:3587559|PMID:15951442)
RGD
UniProt
PMID:11092891 PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 More... GO_REF:0000024 MGI:1931377 MGI:3587559, RGD:13792537 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101
JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in ISO
IBA
(PMID:21302131)
PMID:21873635
(MGI:2159483|PMID:11278918), (MGI:4947204|PMID:21106934)
RGD PMID:11278918 PMID:21106934 PMID:21302131 PMID:21873635 MGI:2159483 MGI:4947204, RGD:13792537 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
JBrowse link
catecholamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:11559542), (PMID:15645182), (PMID:21846718)
UniProt
RGD
PMID:11559542 PMID:15645182 PMID:21846718 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642
JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3799635|PMID:18794526)
PMID:21873635
UniProt
RGD
PMID:18794526 PMID:21873635 GO_REF:0000024 MGI:3799635, RGD:13792537 NCBI chr 1:156,266,655...156,268,704
Ensembl chr 1:156,266,655...156,268,704
JBrowse link
G Maoa monoamine oxidase A NAS RGD PMID:12388421 RGD:629546 NCBI chr  X:6,032,172...6,098,308
Ensembl chr  X:6,030,795...6,099,593
JBrowse link
cellular lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (MGI:1321427|PMID:9861014) RGD PMID:9861014 MGI:1321427 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:26506094 RGD:11251109 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Mt3 metallothionein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4881636|PMID:20544854)
UniProt
RGD
PMID:20544854 GO_REF:0000024 MGI:4881636 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:4430182|PMID:19409882) RGD PMID:19409882 MGI:4430182 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 acts_upstream_of_or_within ISO (MGI:5763710|PMID:26427354) RGD PMID:26427354 MGI:5763710 NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5567909|PMID:19037106)
UniProt
RGD
PMID:19037106 GO_REF:0000024 MGI:5567909 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
ceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:20207939)
PMID:21873635
(MGI:2670497|PMID:12783875)
(MGI:5800647|PMID:27126290)
RGD PMID:12783875 PMID:20207939 PMID:27126290 PMID:21873635 MGI:2670497 MGI:5800647, RGD:13792537 NCBI chr 9:1,792,790...1,824,434
Ensembl chr 9:1,793,139...1,824,434
JBrowse link
G Acer2 alkaline ceramidase 2 involved_in ISO
IBA
(PMID:16940153), (PMID:20207939)
PMID:21873635
RGD PMID:16940153 PMID:20207939 PMID:21873635 RGD:13792537 NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614
JBrowse link
G Acer3 alkaline ceramidase 3 involved_in ISO (PMID:20207939), (PMID:26792856), (PMID:30575723)
(MGI:5749603|PMID:26474409)
RGD PMID:20207939 PMID:26474409 PMID:26792856 PMID:30575723 MGI:5749603 NCBI chr 1:152,504,180...152,606,596
Ensembl chr 1:152,504,186...152,606,591
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:1267186|PMID:9653654), (MGI:5505361|PMID:23770692)
(PMID:10610716), (PMID:12815059)
UniProt
Ensembl
RGD
PMID:9653654 PMID:10610716 PMID:12815059 PMID:23770692 GO_REF:0000024 GO_REF:0000107 MGI:1267186 MGI:5505361 NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IDA
IEA
ISO
IBA
PMID:10488143
GO_REF:0000002
PMID:15123644
(MGI:3608219|PMID:16126722), (MGI:3640407|PMID:16380386), (MGI:6275120|PMID:10652340)
PMID:15217782
PMID:21873635
(PMID:10781606), (PMID:15946935), (PMID:16229686), (PMID:17475390), (PMID:19345744), (PMID:30154232)
InterPro
RGD
PMID:10652340 PMID:10781606 PMID:15946935 PMID:16126722 PMID:16229686 More... GO_REF:0000002 MGI:3608219 MGI:3640407 MGI:6275120, RGD:13838800, RGD:13838793, RGD:13838794, RGD:13792537 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162
JBrowse link
G Cel carboxyl ester lipase involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:2180867 (MGI:2158596|PMID:11733511)
Ensembl
RGD
PMID:11733511 PMID:21873635 GO_REF:0000107 MGI:2158596, RGD:13792537 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde10a phosphodiesterase 10A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:51,765,743...52,218,086
Ensembl chr 1:51,770,132...52,216,563
JBrowse link
G Pde1a phosphodiesterase 1A IMP RGD PMID:16514069 RGD:2312521 NCBI chr 3:64,745,140...65,025,178
Ensembl chr 3:64,747,269...65,024,874
JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO
IEA
IBA
(PMID:19828435)
(MGI:4420377|PMID:19632989)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:19632989 PMID:19828435 PMID:21873635 GO_REF:0000107 MGI:4420377, RGD:13792537 NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
JBrowse link
G Pde5a phosphodiesterase 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000041
(MGI:2450821|PMID:12554648)
UniProt
RGD
PMID:12554648 GO_REF:0000041 MGI:2450821 NCBI chr 2:210,858,515...211,003,480
Ensembl chr 2:210,858,063...210,999,701
JBrowse link
G Pde9a phosphodiesterase 9A involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000041
(MGI:1266874|PMID:9624145), (MGI:5634842|PMID:25799991)
(PMID:25799991)
PMID:21873635
UniProt
RGD
PMID:9624145 PMID:25799991 PMID:21873635 GO_REF:0000024 GO_REF:0000041 MGI:1266874 MGI:5634842, RGD:13792537 NCBI chr20:9,469,809...9,562,949
Ensembl chr20:9,469,848...9,562,948
JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bag3 BAG cochaperone 3 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in NAS PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in NAS PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within
IDA
IGI
PMID:18644871 ParkinsonsUK-UCL
MGI
PMID:18644871 PMID:18644871 RGD:10412301, RGD:10412301 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:11082038
UniProtKB:P13473 (MGI:3813410|PMID:18644871), (MGI:5805578|PMID:27628032)
(MGI:3813419|PMID:18579532)
(PMID:24880125), (PMID:27628032)
(PMID:8662539)
RGD PMID:8662539 PMID:18579532 PMID:18644871 PMID:24880125 PMID:27628032 More... MGI:3813410 MGI:3813419 MGI:5805578, RGD:1581607 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046
JBrowse link
G Synpo2 synaptopodin 2 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 2:211,217,099...211,371,267
Ensembl chr 2:211,216,783...211,371,267
JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gusb glucuronidase, beta involved_in ISO MGI:1856041 (MGI:7281718|PMID:23897660) RGD PMID:23897660 MGI:7281718 NCBI chr12:26,701,191...26,714,718
Ensembl chr12:26,697,951...26,726,905
JBrowse link
G Hexb hexosaminidase subunit beta involved_in ISO
IEA
MGI:2429701 (MGI:5428797|PMID:22451654)
GO_REF:0000107
RGD
Ensembl
PMID:22451654 GO_REF:0000107 MGI:5428797 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223
JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISO MGI:2658730 (MGI:5428797|PMID:22451654) RGD PMID:22451654 MGI:5428797 NCBI chr 8:108,250,654...108,254,526
Ensembl chr 8:108,250,667...108,260,210
JBrowse link
G Hyal4 hyaluronidase 4 acts_upstream_of_or_within ISO (MGI:5490850|PMID:23086929) RGD PMID:23086929 MGI:5490850 NCBI chr 4:53,256,179...53,274,819
Ensembl chr 4:53,256,179...53,274,819
JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO
IEA
(MGI:53656|PMID:5472365)
GO_REF:0000107
RGD
Ensembl
PMID:5472365 GO_REF:0000107 MGI:53656 NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982
JBrowse link
G Dpys dihydropyrimidinase involved_in ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr 7:70,822,648...70,929,255
Ensembl chr 7:70,835,789...70,929,231
JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA involved_in ISO (MGI:5504568|PMID:22925580) RGD PMID:22925580 MGI:5504568 NCBI chr 4:86,161,642...86,204,671
Ensembl chr 4:86,161,643...86,204,628
JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:2683856|PMID:14715930) RGD PMID:14715930 MGI:2683856 NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462
JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (MGI:2683856|PMID:14715930) RGD PMID:14715930 MGI:2683856 NCBI chr 3:43,273,048...43,317,417
Ensembl chr 3:43,273,048...43,317,417
JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin IMP RGD PMID:14576052 RGD:8554807 NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISS
ISO
GO_REF:0000024
(MGI:6157214|PMID:29378847)
UniProt
RGD
PMID:29378847 GO_REF:0000024 MGI:6157214 NCBI chr 1:88,214,475...88,226,072
Ensembl chr 1:88,214,480...88,226,207
JBrowse link
G Nudt7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520)
(MGI:2137102|PMID:11415433)
RGD PMID:11415433 PMID:18799520 PMID:29378847 PMID:21873635 MGI:2137102 MGI:6157214 MGI:6450264, RGD:13792537 NCBI chr19:42,125,679...42,151,198
Ensembl chr19:42,125,711...42,151,081
JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:201,293,660...201,295,233
Ensembl chr 1:201,292,619...201,295,224
JBrowse link
coumarin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon3 paraoxonase 3 IDA RGD PMID:12946270 RGD:1303961 NCBI chr 4:33,356,983...33,383,681
Ensembl chr 4:33,349,168...33,383,855
JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C IDA RGD PMID:15502008 RGD:2317077 NCBI chr 9:88,739,577...88,808,465
Ensembl chr 9:88,713,184...88,808,465
JBrowse link
G Ugt1a8 UDP glucuronosyltransferase family 1 member A8 IDA RGD PMID:15502008 RGD:2317077 NCBI chr 9:88,727,094...88,808,465
Ensembl chr 9:88,713,184...88,808,465
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:190,546,015...190,582,790
Ensembl chr 2:190,554,980...190,582,784
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO
IBA
GO_REF:0000107
(PMID:19029303)
PMID:21873635
Ensembl
RGD
PMID:19029303 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO
ISS
(PMID:19029303)
(PMID:19029303), (PMID:29476152)
GO_REF:0000024
RGD
UniProt
PMID:19029303 PMID:29476152 GO_REF:0000024 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO (PMID:29476152) RGD PMID:29476152 NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377
JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 involved_in ISO (PMID:29476152) RGD PMID:29476152 NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:51,523,142...51,550,241
Ensembl chr 2:51,522,921...51,550,241
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11051545), (PMID:19029303)
Ensembl
RGD
PMID:11051545 PMID:19029303 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19029303)
UniProt
RGD
PMID:19029303 GO_REF:0000024 NCBI chr 5:132,882,137...132,899,108
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) RGD PMID:11278936 NCBI chr 1:242,559,365...242,601,044
Ensembl chr 1:242,559,365...242,601,447
JBrowse link
CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in ISO (PMID:19056938) RGD PMID:19056938 NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642
JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:19056938) RGD PMID:19056938 NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Exosc2 exosome component 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575
JBrowse link
G Exosc3 exosome component 3 involved_in ISO
IBA
(PMID:19056938)
PMID:21873635
RGD PMID:19056938 PMID:21873635 RGD:13792537 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720