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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to growth factor stimulus
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Accession:GO:0071363 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.


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cellular response to growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan ISO RGD PMID:19968598 RGD:2315749 NCBI chr 7:54,449,830...54,520,606
Ensembl chr 7:54,449,816...54,519,194 		JBrowse link
G ACVR1 activin A receptor type 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
G ACVR1B activin A receptor type 1B involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:17,314,322...17,350,726
Ensembl chr 5:17,314,276...17,350,722 		JBrowse link
G ACVR1C activin A receptor type 1C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:64,452,632...64,529,329
Ensembl chr15:64,455,989...64,529,107 		JBrowse link
G ACVR2A activin A receptor type 2A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:4,177,333...4,259,056
Ensembl chr15:4,173,805...4,259,706 		JBrowse link
G ACVR2B activin A receptor type 2B involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:23,237,699...23,276,086
Ensembl chr13:23,237,699...23,267,373 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (PMID:19744960) MGI PMID:19744960
G AMHR2 anti-Mullerian hormone receptor type 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:18,642,212...18,648,859
Ensembl chr 5:18,642,823...18,648,848 		JBrowse link
G ANGPT2 angiopoietin 2 ISO RGD PMID:16176970 RGD:2314221 NCBI chr15:37,544,177...37,600,925
Ensembl chr15:37,544,707...37,599,041 		JBrowse link
G APOE apolipoprotein E ISO brain derived neurotrophic factor RGD PMID:19713443 PMID:20535563 RGD:2317725 RGD:6904215 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7848824) Ensembl
MGI		 PMID:7848824 GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7848824) Ensembl
MGI		 PMID:7848824 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G BYSL bystin like ISO nerve growth factor RGD PMID:15305856 RGD:2316201 NCBI chr 7:37,074,517...37,086,753
Ensembl chr 7:37,074,515...37,088,533 		JBrowse link
G CAT catalase ISO RGD PMID:21276205 RGD:5130881 NCBI chr 2:26,493,664...26,533,881
Ensembl chr 2:26,487,653...26,581,452 		JBrowse link
G CIB1 calcium and integrin binding 1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:55,794,834...55,798,666
Ensembl chr 7:55,794,836...55,798,590 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ISO RGD PMID:19013137 RGD:5147853 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G CLU clusterin ISO nerve growth factor RGD PMID:16038898 RGD:1582420 NCBI chr14:11,336,585...11,352,569
Ensembl chr14:11,336,595...11,349,764 		JBrowse link
G CPNE3 copine 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,276,330...50,345,400
Ensembl chr 4:50,276,426...50,345,366 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,705,496...110,771,728 		JBrowse link
G CTNNB1 catenin beta 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DDC dopa decarboxylase ISO nerve growth factor RGD PMID:17306206 RGD:5129106 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212 		JBrowse link
G DTYMK deoxythymidylate kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8845311) Ensembl
MGI		 PMID:8845311 GO_REF:0000107 NCBI chr15:140,248,071...140,255,803
Ensembl chr15:140,248,079...140,255,805 		JBrowse link
G EGFR epidermal growth factor receptor acts_upstream_of_or_within ISO nerve growth factor
(PMID:8702723)		 RGD
MGI		 PMID:3495539 PMID:8702723 RGD:5131535 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,475,589 		JBrowse link
G EGR1 early growth response 1 ISO nerve growth factor RGD PMID:21489990 RGD:5131647 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296 		JBrowse link
G EGR4 early growth response 4 ISO nerve growth factor RGD PMID:2072895 RGD:728433 NCBI chr 3:69,485,919...69,488,788
Ensembl chr 3:69,485,949...69,488,975 		JBrowse link
G EHD4 EH domain containing 4 ISO nerve growth factor RGD PMID:12011113 RGD:632501 NCBI chr 1:129,374,515...129,460,206
Ensembl chr 1:129,374,613...129,458,686 		JBrowse link
G EMD emerin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:124,883,047...124,885,429
Ensembl chr  X:124,883,049...124,885,432 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,591,621...22,621,384
Ensembl chr12:22,590,725...22,621,351 		JBrowse link
G FEZ1 fasciculation and elongation protein zeta 1 ISO RGD PMID:17669366 RGD:2316312 NCBI chr 9:52,621,175...52,672,660
Ensembl chr 9:52,621,183...52,672,660 		JBrowse link
G FST follistatin ISO GDF-9, activin A RGD PMID:23567549 RGD:151893499 NCBI chr16:32,806,341...32,811,382
Ensembl chr16:32,805,932...32,811,421 		JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase ISO TGF-beta RGD PMID:11236902 RGD:2324869 NCBI chr 1:77,584,675...77,810,605
Ensembl chr 1:77,585,439...77,810,581 		JBrowse link
G FZD1 frizzled class receptor 1 ISO RGD PMID:1334084 RGD:61590 NCBI chr 9:71,346,994...71,356,488
Ensembl chr 9:71,349,988...71,352,104 		JBrowse link
G FZD2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chr12:18,740,417...18,742,301
Ensembl chr12:18,740,653...18,742,420 		JBrowse link
G GAS6 growth arrest specific 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8336730)
(PMID:18188450)		 Ensembl
MGI		 PMID:8336730 PMID:18188450 GO_REF:0000107 NCBI chr11:78,848,797...78,880,733
Ensembl chr11:78,848,797...78,881,284 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 ISO BDNF RGD PMID:19958814 RGD:2325933 NCBI chr16:69,332,786...69,654,366
Ensembl chr16:69,332,587...69,655,380 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO BDNF RGD PMID:19958814 RGD:2325933 NCBI chr 3:32,749,329...33,149,350
Ensembl chr 3:32,750,700...33,143,499 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO BDNF RGD PMID:19958814 RGD:2325933 NCBI chr 5:58,477,862...58,948,735
Ensembl chr 5:58,480,528...58,927,558 		JBrowse link
G HAP1 huntingtin associated protein 1 ISO RGD PMID:10924259 RGD:728841 NCBI chr12:20,938,463...20,950,053
Ensembl chr12:20,939,554...20,950,051 		JBrowse link
G HTR3A 5-hydroxytryptamine receptor 3A ISO murine NGF RGD PMID:10854267 RGD:61635 NCBI chr 9:41,575,085...41,589,083
Ensembl chr 9:41,576,796...41,589,538 		JBrowse link
G HTR3B 5-hydroxytryptamine receptor 3B ISO murine NGF RGD PMID:10854267 RGD:61635 NCBI chr 9:41,512,467...41,556,912
Ensembl chr 9:41,512,374...41,556,738 		JBrowse link
G HTRA2 HtrA serine peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:68,516,666...68,520,025
Ensembl chr 3:68,516,500...68,519,886 		JBrowse link
G IBSP integrin binding sialoprotein involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:7848824) UniProt
MGI
Ensembl		 PMID:7848824 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:131,208,281...131,222,048
Ensembl chr 8:131,208,282...131,241,266 		JBrowse link
G INSR insulin receptor acts_upstream_of_or_within ISO (PMID:19744960) MGI PMID:19744960 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,104 		JBrowse link
G KLF4 KLF transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:248,604,817...248,609,574
Ensembl chr 1:248,604,820...248,609,035 		JBrowse link
G LRP2 LDL receptor related protein 2 involved_in ISO PMID:16306401 ARUK-UCL PMID:16306401 RGD:14697713 NCBI chr15:75,565,299...75,754,604
Ensembl chr15:75,565,303...75,716,694 		JBrowse link
G LRP8 LDL receptor related protein 8 ISO nerve growth factor RGD PMID:8626535 RGD:2324688 NCBI chr 6:158,905,464...158,984,743
Ensembl chr 6:158,905,410...158,983,382 		JBrowse link
G MAP1B microtubule associated protein 1B ISO RGD PMID:9473667 RGD:2304027 NCBI chr16:48,403,338...48,501,453
Ensembl chr16:48,403,568...48,498,885 		JBrowse link
G MAP2K5 mitogen-activated protein kinase kinase 5 involved_in ISO PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chr 1:165,458,263...165,733,452
Ensembl chr 1:165,458,258...165,740,297 		JBrowse link
G MAPK7 mitogen-activated protein kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,144,138...60,148,743
Ensembl chr12:60,144,136...60,158,739 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:17568197 RGD:2304232 NCBI chr 2:78,338,466...78,399,108
Ensembl chr 2:78,338,376...78,399,100 		JBrowse link
G MDM2 MDM2 proto-oncogene ISO FGF1 RGD PMID:16091747 RGD:2317392 NCBI chr 5:33,105,717...33,137,602
Ensembl chr 5:33,105,759...33,137,739 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO PMID:19654000 UniProt PMID:19654000 RGD:5131609 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO HGF RGD PMID:7526865 RGD:2317553 NCBI chr18:29,426,044...29,541,526
Ensembl chr18:29,426,048...29,541,512 		JBrowse link
G MIR103-1 microRNA mir-103-1 acts_upstream_of_or_within ISO (PMID:20223197) MGI PMID:20223197 NCBI chr16:55,329,442...55,329,523
Ensembl chr16:55,329,442...55,329,523 		JBrowse link
G MIR103-2 microRNA mir-103-2 acts_upstream_of_or_within ISO (PMID:20223197) MGI PMID:20223197 NCBI chr17:31,808,837...31,808,916
Ensembl chr17:31,808,836...31,808,920 		JBrowse link
G MIR138 microRNA mir-138 acts_upstream_of_or_within ISO (PMID:20223197) MGI PMID:20223197 NCBI chr13:27,450,130...27,450,214
Ensembl chr13:27,450,130...27,450,214 		JBrowse link
G MIR219B microRNA mir-219b acts_upstream_of_or_within ISO (PMID:20223197) MGI PMID:20223197 NCBI chr 1:268,816,967...268,817,050
Ensembl chr 1:268,816,961...268,817,057 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:7848824) MGI PMID:7848824 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G MYOCD myocardin ISO RGD PMID:20621093 RGD:5132874 NCBI chr12:56,931,628...57,029,258
Ensembl chr12:56,931,317...57,029,258 		JBrowse link
G MYOG myogenin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15322112) Ensembl
MGI		 PMID:15322112 GO_REF:0000107 NCBI chr 9:113,783,233...113,785,312
Ensembl chr 9:113,782,284...113,787,340 		JBrowse link
G NKX2-5 NK2 homeobox 5 ISO RGD PMID:19395679 RGD:5131637 NCBI chr16:51,086,014...51,089,165
Ensembl chr16:51,086,011...51,089,162 		JBrowse link
G NOS1 nitric oxide synthase 1 involved_in ISO (MGI:4839449|PMID:16427017) BHF-UCL PMID:16427017 MGI:4839449 NCBI chr14:35,112,898...35,299,297
Ensembl chr14:35,113,184...35,295,944 		JBrowse link
G NOS3 nitric oxide synthase 3 ISO insulin-like growth factor-1 RGD PMID:18023142 RGD:7794789 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,158...6,228,943 		JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,255,981 		JBrowse link
G OPRD1 opioid receptor delta 1 ISO RGD PMID:7562535 RGD:2316598 NCBI chr 6:85,775,576...85,827,170
Ensembl chr 6:85,785,276...85,830,877 		JBrowse link
G PAX9 paired box 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9244299) Ensembl
MGI		 PMID:9244299 GO_REF:0000107 NCBI chr 7:63,324,709...63,346,326
Ensembl chr 7:63,324,711...63,346,310 		JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in IEA UniProt GO_REF:0000117 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647 		JBrowse link
G PFN1 profilin 1 ISO RGD PMID:10703666 RGD:2324859 NCBI chr12:51,962,642...51,965,570
Ensembl chr12:51,961,952...51,965,464 		JBrowse link
G PLK5 polo like kinase 5 (inactive) involved_in ISO (PMID:21245385) UniProt PMID:21245385 NCBI chr 2:76,948,062...76,956,310 JBrowse link
G PNMT phenylethanolamine N-methyltransferase ISO nerve growth factor RGD PMID:16926281 RGD:5130702 NCBI chr12:22,648,396...22,651,520
Ensembl chr12:22,648,398...22,649,999 		JBrowse link
G PPP2R5B protein phosphatase 2 regulatory subunit B'beta acts_upstream_of_or_within ISO PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chr 2:7,248,141...7,256,796
Ensembl chr 2:7,248,151...7,256,427 		JBrowse link
G PRDM4 PR/SET domain 4 ISO nerve growth factor RGD PMID:10485890 RGD:633619 NCBI chr 5:12,638,335...12,668,890
Ensembl chr 5:12,638,514...12,668,886 		JBrowse link
G RACK1 receptor for activated C kinase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:57,280,192...57,284,846
Ensembl chr 2:57,279,857...57,284,849 		JBrowse link
G RIPK1 receptor interacting serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:1,841,143...1,880,705
Ensembl chr 7:1,841,239...1,880,699 		JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,111,584...36,159,287
Ensembl chr12:36,111,653...36,160,376 		JBrowse link
G SERPINE1 serpin family E member 1 ISO connective tissue growth factor RGD PMID:17474984 RGD:2316122 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G SHC1 SHC adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,818,226...94,831,766
Ensembl chr 4:94,810,875...94,831,765 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:13,933,552...14,043,108
Ensembl chr13:13,933,711...14,043,058 		JBrowse link
G SPARC secreted protein acidic and cysteine rich acts_upstream_of_or_within ISO (PMID:7848824) MGI PMID:7848824 NCBI chr16:71,368,164...71,380,972
Ensembl chr16:71,357,586...71,381,161 		JBrowse link
G SPHK1 sphingosine kinase 1 involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:16135093 GO_REF:0000033 GO_REF:0000118 RGD:2311349 NCBI chr12:5,114,946...5,122,580
Ensembl chr12:5,114,947...5,120,083 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO nerve growth factor RGD PMID:15249139 RGD:4891940 NCBI chr16:75,309,830...75,335,438
Ensembl chr16:75,310,211...75,335,391 		JBrowse link
G STAT5B signal transducer and activator of transcription 5B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,498,103...20,574,365
Ensembl chr12:20,508,404...20,574,266 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:7848824) MGI PMID:7848824 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
G TGFB3 transforming growth factor beta 3 acts_upstream_of_or_within ISO (PMID:7848824) MGI PMID:7848824 NCBI chr 7:99,133,873...99,162,239
Ensembl chr 7:99,133,879...99,162,232 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 ISO EGF RGD PMID:15153551 PMID:18441095 RGD:1599409 RGD:2317192 NCBI chr 6:103,226,395...103,234,591
Ensembl chr 6:103,226,402...103,234,610 		JBrowse link
G TH tyrosine hydroxylase ISO nerve growth factor RGD PMID:17306206 RGD:5129106 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
G THBS1 thrombospondin 1 ISO RGD PMID:15831915 RGD:2317962 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B ISO ciliary neurotrophic factor RGD PMID:20715153 RGD:5130921 NCBI chr 6:72,195,420...72,231,146
Ensembl chr 6:72,195,435...72,231,147 		JBrowse link
G TRPV1 transient receptor potential cation channel subfamily V member 1 ISO nerve growth factor RGD PMID:17217411 RGD:2317106 NCBI chr12:49,676,536...49,709,634
Ensembl chr12:49,677,291...49,713,977 		JBrowse link
G TWF2 twinfilin actin binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,361,294...34,370,997
Ensembl chr13:34,361,297...34,371,277 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 ISO RGD PMID:19893041 RGD:5131599 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G URI1 URI1 prefoldin like chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,043,320...40,110,540
Ensembl chr 6:40,023,595...40,110,536 		JBrowse link
BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22729085) Ensembl
MGI		 PMID:22729085 GO_REF:0000107 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708 		JBrowse link
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
G ACVR2A activin A receptor type 2A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17472960) MGI
Ensembl		 PMID:17472960 GO_REF:0000107 NCBI chr15:4,177,333...4,259,056
Ensembl chr15:4,173,805...4,259,706 		JBrowse link
G ACVR2B activin A receptor type 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,237,699...23,276,086
Ensembl chr13:23,237,699...23,267,373 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22783020) Ensembl
MGI
GO_Central		 PMID:22783020 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G AMHR2 anti-Mullerian hormone receptor type 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:18,642,212...18,648,859
Ensembl chr 5:18,642,823...18,648,848 		JBrowse link
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:80,984,969...81,076,573
Ensembl chr15:80,985,126...81,081,014 		JBrowse link
G BMP10 bone morphogenetic protein 10 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:16049014) MGI
TreeGrafter
GO_Central
Ensembl		 PMID:16049014 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:73,519,904...73,530,448
Ensembl chr 3:73,519,934...73,529,950 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:14623234), (PMID:19208758), (PMID:19852960), (PMID:20065295), (PMID:25100727)
(PMID:15975920)
(PMID:17472960)		 RGD
MGI
TreeGrafter
GO_Central
Ensembl		 PMID:12398941 PMID:14623234 PMID:15975920 PMID:17472960 PMID:19208758 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:631753 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:17472960)
(PMID:15975920)
(PMID:14623234), (PMID:17472960)		 MGI
TreeGrafter
GO_Central
Ensembl		 PMID:14623234 PMID:15975920 PMID:17472960 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMP5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,344,924...25,468,430
Ensembl chr 7:25,344,822...25,470,470 		JBrowse link
G BMP6 bone morphogenetic protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14623234), (PMID:19852960) Ensembl
MGI
TreeGrafter		 PMID:14623234 PMID:19852960 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14623234) Ensembl
MGI
TreeGrafter		 PMID:14623234 GO_REF:0000107 GO_REF:0000118 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G BMPER BMP binding endothelial regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:39,417,830...39,664,010
Ensembl chr18:39,412,838...39,663,592 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16604073)
(PMID:16049014)
(PMID:17699604)
(PMID:9268344)
(PMID:16943278)		 Ensembl
MGI
GO_Central
TreeGrafter		 PMID:9268344 PMID:16049014 PMID:16604073 PMID:16943278 PMID:17699604 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11376112)
(PMID:16049014)
(PMID:16604073)		 Ensembl
MGI
GO_Central
TreeGrafter		 PMID:11376112 PMID:16049014 PMID:16604073 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17472960) Ensembl
MGI
TreeGrafter		 PMID:17472960 GO_REF:0000107 GO_REF:0000118 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G CHRD chordin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:122,266,632...122,277,513
Ensembl chr13:122,266,626...122,277,645 		JBrowse link
G CHRDL1 chordin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:90,703,422...90,827,216
Ensembl chr  X:90,703,428...90,827,210 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21350216) Ensembl
MGI		 PMID:21350216 GO_REF:0000107 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:14,571,712...14,580,740
Ensembl chr12:14,571,951...14,580,742 		JBrowse link
G DLX3 distal-less homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,177,896...26,183,172
Ensembl chr12:26,177,903...26,183,157 		JBrowse link
G DLX5 distal-less homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:76,639,915...76,643,689
Ensembl chr 9:76,639,561...76,643,884 		JBrowse link
G DSG4 desmoglein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18692037) Ensembl
MGI		 PMID:18692037 GO_REF:0000107 NCBI chr 6:115,288,606...115,325,322
Ensembl chr 6:115,289,859...115,325,854 		JBrowse link
G ECSIT ECSIT signaling integrator acts_upstream_of_or_within ISO (PMID:14633973) MGI PMID:14633973 NCBI chr 2:70,154,861...70,170,762
Ensembl chr 2:70,154,843...70,170,744 		JBrowse link
G EGR1 early growth response 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8769660) Ensembl
MGI		 PMID:8769660 GO_REF:0000107 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296 		JBrowse link
G ETV2 ETS variant transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18462699) Ensembl
MGI		 PMID:18462699 GO_REF:0000107 NCBI chr 6:45,085,984...45,089,592
Ensembl chr 6:45,087,100...45,089,626 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22556407)
(PMID:21148566), (PMID:22556407), (PMID:23458899), (PMID:28445472)		 Ensembl
MGI		 PMID:21148566 PMID:22556407 PMID:23458899 PMID:28445472 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G FAM83B family with sequence similarity 83 member B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:26,058,175...26,142,040
Ensembl chr 7:26,058,168...26,137,655 		JBrowse link
G FAM83D family with sequence similarity 83 member D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:41,868,982...41,892,222
Ensembl chr17:41,868,976...41,892,220 		JBrowse link
G FAM83E family with sequence similarity 83 member E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:53,963,543...53,974,207
Ensembl chr 6:53,963,859...53,974,010 		JBrowse link
G FAM83F family with sequence similarity 83 member F involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:8,320,972...8,354,738
Ensembl chr 5:8,319,203...8,354,723 		JBrowse link
G FAM83G family with sequence similarity 83 member G involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:60,296,749...60,322,653
Ensembl chr12:60,296,820...60,322,650 		JBrowse link
G FAM83H family with sequence similarity 83 member H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:887,472...907,523
Ensembl chr 4:892,041...907,517 		JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18590716) Ensembl
MGI		 PMID:18590716 GO_REF:0000107 NCBI chr 2:59,256,546...59,267,171
Ensembl chr 2:59,253,342...59,267,165 		JBrowse link
G FST follistatin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15525533) Ensembl
MGI		 PMID:15525533 GO_REF:0000107 NCBI chr16:32,806,341...32,811,382
Ensembl chr16:32,805,932...32,811,421 		JBrowse link
G GDF2 growth differentiation factor 2 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:88,506,083...88,513,416
Ensembl chr14:88,507,399...88,513,375 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G GDF6 growth differentiation factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16049014) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:16049014 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:40,473,015...40,491,142
Ensembl chr 4:40,472,935...40,490,033 		JBrowse link
G GDF7 growth differentiation factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16049014) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:16049014 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:117,586,188...117,592,541
Ensembl chr 3:117,587,430...117,592,466 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18579678) Ensembl
MGI		 PMID:18579678 GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881 		JBrowse link
G HFE homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:20,758,604...20,767,004
Ensembl chr 7:20,758,741...20,767,000 		JBrowse link
G HIVEP1 HIVEP zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:8,515,856...8,661,686
Ensembl chr 7:8,515,901...8,661,151 		JBrowse link
G HJV hemojuvelin BMP co-receptor involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16604073)
(PMID:19751239)
(PMID:16604073), (PMID:24409331)		 Ensembl
MGI
TreeGrafter
GO_Central		 PMID:16604073 PMID:19751239 PMID:24409331 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:99,327,989...99,332,647
Ensembl chr 4:99,328,053...99,332,645 		JBrowse link
G ID1 inhibitor of DNA binding 1 acts_upstream_of_or_within ISO (PMID:15820682) MGI PMID:15820682 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,316,514...35,317,736 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9769173) Ensembl
MGI		 PMID:9769173 GO_REF:0000107 NCBI chr 8:113,824,511...113,944,078
Ensembl chr 8:113,825,161...113,944,070 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,291,444...18,299,410
Ensembl chr 3:18,291,445...18,299,567 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISO (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G MIR122 microRNA mir-122 acts_upstream_of_or_within ISO (PMID:19520079) MGI PMID:19520079 NCBI chr 1:162,329,776...162,329,860
Ensembl chr 1:162,329,767...162,329,860 		JBrowse link
G MIR125A microRNA mir-125a acts_upstream_of_or_within ISO (PMID:22751012) MGI PMID:22751012 NCBI chr 6:58,331,566...58,331,645
Ensembl chr 6:58,331,566...58,331,645 		JBrowse link
G MIR16-2 microRNA mir-16-2 acts_upstream_of_or_within ISO (PMID:19520079) MGI PMID:19520079 NCBI chr11:17,757,606...17,757,684
Ensembl chr11:17,757,601...17,757,687 		JBrowse link
G MIR21 microRNA mir-21 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (PMID:19520079) MGI PMID:19520079 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186 		JBrowse link
G MIRLET7A-2 microRNA let-7a-2 acts_upstream_of_or_within ISO (PMID:19520079) MGI PMID:19520079 NCBI chr 3:43,465,667...43,465,758
Ensembl chr 3:43,465,667...43,465,758 		JBrowse link
G MIRLET7D microRNA let-7d acts_upstream_of_or_within ISO (PMID:19520079) MGI PMID:19520079 NCBI chr 3:43,468,501...43,468,596
Ensembl chr 3:43,468,501...43,468,596 		JBrowse link
G MIRLET7F-1 microRNA let-7f-1 acts_upstream_of_or_within ISO (PMID:19520079) MGI PMID:19520079 NCBI chr  X:46,303,245...46,303,327
Ensembl chr  X:46,303,245...46,303,327 		JBrowse link
G MIRLET7F-2 microRNA let-7f-2 acts_upstream_of_or_within ISO (PMID:19520079) MGI PMID:19520079 NCBI chr 3:43,466,034...43,466,130
Ensembl chr 3:43,466,027...43,466,133 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18590716)
(PMID:17601530), (PMID:18667074)
(PMID:18667074)		 Ensembl
MGI		 PMID:17601530 PMID:18590716 PMID:18667074 GO_REF:0000107 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:17601530), (PMID:18667074)
(PMID:18590716)
(PMID:18667074)		 MGI PMID:17601530 PMID:18590716 PMID:18667074 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NANOG Nanog homeobox involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16801560) Ensembl
MGI		 PMID:16801560 GO_REF:0000107 NCBI chr 5:62,931,642...62,939,086
Ensembl chr 5:62,932,382...62,939,082 		JBrowse link
G NFIA nuclear factor I A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:150,834,002...151,229,773
Ensembl chr 6:150,835,494...151,426,749 		JBrowse link
G NOG noggin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18462699) Ensembl
MGI		 PMID:18462699 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,981,636...101,150,195 		JBrowse link
G PDCD4 programmed cell death 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:121,271,824...121,334,767
Ensembl chr14:121,305,629...121,338,740 		JBrowse link
G POU5F1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr 7:23,564,654...23,570,691 JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:18382765) BHF-UCL PMID:18382765 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944 		JBrowse link
G RGMA repulsive guidance molecule BMP co-receptor a involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15975920) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:15975920 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:85,921,524...85,968,887
Ensembl chr 7:85,921,594...85,968,888 		JBrowse link
G RGMB repulsive guidance molecule BMP co-receptor b involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15671031) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:15671031 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:105,042,479...105,070,428
Ensembl chr 2:105,042,532...105,070,409 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:20660756) MGI PMID:20660756 NCBI chr14:2,803,840...3,035,384
Ensembl chr14:2,804,061...3,035,296 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:4418577|PMID:20059955) UniProt PMID:20059955 MGI:4418577 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921 		JBrowse link
G SLC39A5 solute carrier family 39 member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,631,874...21,640,476
Ensembl chr 5:21,631,924...21,637,646 		JBrowse link
G SMAD1 SMAD family member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA
ISS		 (PMID:16604073)
(PMID:25100727)
(PMID:19224984)
(PMID:15198985)		 RGD
MGI
TreeGrafter
GO_Central
UniProt
Ensembl		 PMID:15198985 PMID:16020542 PMID:16604073 PMID:19224984 PMID:25100727 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1643232 NCBI chr 8:82,907,557...82,987,909
Ensembl chr 8:82,908,527...82,968,994 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G SMAD5 SMAD family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:19224984)
(PMID:18590716)		 Ensembl
MGI
GO_Central
TreeGrafter		 PMID:18590716 PMID:19224984 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:138,287,635...138,344,092
Ensembl chr 2:138,287,710...138,344,762 		JBrowse link
G SMAD6 SMAD family member 6 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:164,652,602...164,735,084
Ensembl chr 1:164,656,887...164,735,704 		JBrowse link
G SMAD9 SMAD family member 9 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:19224984)
(PMID:18590716)		 GO_Central
MGI
TreeGrafter		 PMID:18590716 PMID:19224984 GO_REF:0000033 GO_REF:0000118 NCBI chr11:12,705,652...12,727,981
Ensembl chr11:12,705,368...12,763,008 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24505141) Ensembl
MGI		 PMID:24505141 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:6,037,732...6,142,569
Ensembl chr 3:6,037,741...6,142,575 		JBrowse link
G SOST sclerostin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17002572) Ensembl
MGI		 PMID:17002572 GO_REF:0000107 NCBI chr12:19,354,912...19,360,348
Ensembl chr12:19,355,234...19,360,352 		JBrowse link
G SOSTDC1 sclerostin domain containing 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16179481) Ensembl
MGI		 PMID:16179481 GO_REF:0000107 NCBI chr 9:85,743,332...85,747,893
Ensembl chr 9:85,743,341...85,747,591 		JBrowse link
G SPART spartin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22619377) Ensembl
MGI		 PMID:22619377 GO_REF:0000107 NCBI chr11:12,313,211...12,346,226
Ensembl chr11:12,313,210...12,374,645 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of ISO (PMID:17919533) MGI PMID:17919533 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,412...123,546,417 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in
acts_upstream_of		 ISS
ISO
IEA		 (PMID:1333192)
(PMID:25382630)		 BHF-UCL
MGI
Ensembl		 PMID:1333192 PMID:25382630 GO_REF:0000107 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796 		JBrowse link
G TMEM100 transmembrane protein 100 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,008,007...32,014,094
Ensembl chr12:32,008,012...32,014,009 		JBrowse link
G TMPRSS6 transmembrane serine protease 6 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19751239) Ensembl
MGI		 PMID:19751239 GO_REF:0000107 NCBI chr 5:10,663,491...10,704,583
Ensembl chr 5:10,663,635...10,705,471 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14681194) Ensembl
MGI		 PMID:14681194 GO_REF:0000107 NCBI chr 6:98,629,116...98,678,322
Ensembl chr 6:98,625,505...98,678,258 		JBrowse link
G USP15 ubiquitin specific peptidase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,964,380...27,082,549
Ensembl chr 5:26,964,553...27,097,444 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:36,736,049...36,888,702
Ensembl chr  X:36,760,865...36,885,250 		JBrowse link
G VSIR V-set immunoregulatory receptor acts_upstream_of_or_within ISO (PMID:22751012)
(PMID:20042595)		 MGI PMID:20042595 PMID:22751012 NCBI chr14:74,667,081...74,693,347
Ensembl chr14:74,666,624...74,693,281 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18351662) Ensembl
MGI		 PMID:18351662 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G ZNF8 zinc finger protein 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12370310) Ensembl
MGI		 PMID:12370310 GO_REF:0000107 NCBI chr 6:62,894,617...62,914,448
Ensembl chr 6:62,894,704...62,905,838 		JBrowse link
cellular response to BMP stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
G ACVR2A activin A receptor type 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,177,333...4,259,056
Ensembl chr15:4,173,805...4,259,706 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:19,547,003...19,920,780
Ensembl chr16:19,547,011...19,920,513 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,919,398...47,994,528
Ensembl chr 7:47,929,033...47,994,453 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9246083 GO_REF:0000107 RGD:8699515 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9246083 GO_REF:0000107 RGD:8699515 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20501701) Ensembl
MGI		 PMID:20501701 GO_REF:0000107 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:78,186,667...78,191,788
Ensembl chr15:78,185,790...78,191,226 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20404326) Ensembl
MGI		 PMID:20404326 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:12619935 RGD:7205471 NCBI chr15:117,658,158...117,737,145
Ensembl chr15:117,658,099...117,731,014 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20501701) Ensembl
MGI		 PMID:20501701 GO_REF:0000107 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,663...63,388,859 		JBrowse link
G GATA5 GATA binding protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20501701) Ensembl
MGI		 PMID:20501701 GO_REF:0000107 NCBI chr17:61,824,891...61,834,742
Ensembl chr17:61,824,899...61,834,267 		JBrowse link
G GATA6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20501701) Ensembl
MGI		 PMID:20501701 GO_REF:0000107 NCBI chr 6:107,282,709...107,314,725
Ensembl chr 6:107,282,849...107,314,626 		JBrowse link
G GDF2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,506,083...88,513,416
Ensembl chr14:88,507,399...88,513,375 		JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:95,442,655...95,459,597
Ensembl chr 6:95,442,661...95,459,575 		JBrowse link
G HJV hemojuvelin BMP co-receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:99,327,989...99,332,647
Ensembl chr 4:99,328,053...99,332,645 		JBrowse link
G KCND3 potassium voltage-gated channel subfamily D member 3 ISO RGD PMID:23747723 RGD:8847123 NCBI chr 4:108,394,687...108,621,514
Ensembl chr 4:108,246,237...108,621,510 		JBrowse link
G MIR30B microRNA mir-30b involved_in ISO (PMID:23968872) BHF-UCL PMID:23968872 NCBI chr 4:6,952,794...6,952,869
Ensembl chr 4:6,952,794...6,952,869 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:23964093) MGI PMID:23964093 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567 		JBrowse link
G NOG noggin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20501701) RGD
MGI
Ensembl		 PMID:20501701 PMID:21238590 GO_REF:0000107 RGD:12801486 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G PHOX2B paired like homeobox 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19793887) Ensembl
MGI		 PMID:19793887 GO_REF:0000107 NCBI chr 8:32,841,425...32,846,133
Ensembl chr 8:32,842,145...32,846,127 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:5294319|PMID:9328840) UniProt PMID:9328840 MGI:5294319 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 ISO RGD PMID:23409135 RGD:10043095 NCBI chr 1:130,458,909...130,473,791
Ensembl chr 1:130,458,909...130,473,783 		JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 ISO RGD PMID:23409135 RGD:10043095 NCBI chr 6:47,181,772...47,210,564
Ensembl chr 6:47,181,768...47,210,559 		JBrowse link
G TMEM100 transmembrane protein 100 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:32,008,007...32,014,094
Ensembl chr12:32,008,012...32,014,009 		JBrowse link
G TNMD tenomodulin involved_in ISO PMID:21412429 UniProt PMID:21412429 RGD:8553701 NCBI chr  X:82,269,323...82,292,083
Ensembl chr  X:82,269,239...82,292,246 		JBrowse link
G VSTM2A V-set and transmembrane domain containing 2A involved_in ISO (MGI:5825384|PMID:28052263) UniProt PMID:28052263 MGI:5825384 NCBI chr 9:138,990,480...139,017,965
Ensembl chr 9:138,990,480...138,997,131 		JBrowse link
cellular response to brain-derived neurotrophic factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRNKL1 crooked neck pre-mRNA splicing factor 1 ISO RGD PMID:12801913 RGD:634609 NCBI chr17:28,079,541...28,111,871
Ensembl chr17:28,077,707...28,111,558 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,841 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO RGD PMID:19625250 RGD:10401254 NCBI chr 2:74,746,541...74,756,687
Ensembl chr 2:74,747,080...74,756,680 		JBrowse link
G EEF2K eukaryotic elongation factor 2 kinase ISO RGD PMID:19625250 RGD:10401254 NCBI chr 3:23,887,120...23,980,231
Ensembl chr 3:23,887,125...23,956,373 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 ISO RGD PMID:17632064 RGD:10044262 NCBI chr12:2,285,679...2,311,750
Ensembl chr12:2,285,579...2,313,874 		JBrowse link
G GAD2 glutamate decarboxylase 2 ISO RGD PMID:25852071 RGD:401900604 NCBI chr10:49,316,682...49,391,013
Ensembl chr10:49,313,647...49,390,926 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:14597197 PMID:23460828 PMID:24712995 RGD:152975667 RGD:152995495 RGD:405650624 NCBI chr16:69,332,786...69,654,366
Ensembl chr16:69,332,587...69,655,380 		JBrowse link
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 ISO RGD PMID:14597197 PMID:23460828 RGD:152975667 RGD:152995495 NCBI chr 8:46,078,122...46,247,144
Ensembl chr 8:46,078,276...46,241,914 		JBrowse link
G GRIP1 glutamate receptor interacting protein 1 ISO RGD PMID:14597197 PMID:23460828 RGD:152975667 RGD:152995495 NCBI chr 5:30,697,018...31,175,412
Ensembl chr 5:30,697,040...31,020,901 		JBrowse link
G IRS1 insulin receptor substrate 1 ISO RGD PMID:17467122 RGD:10045898 NCBI chr15:128,245,846...128,307,321
Ensembl chr15:128,245,846...128,307,284 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 ISO RGD PMID:11520908 RGD:10045822 NCBI chr 8:118,391,010...118,478,927
Ensembl chr 8:118,390,638...118,506,691 		JBrowse link
G NRG1 neuregulin 1 ISO RGD PMID:25913151 PMID:26043693 RGD:405650588 RGD:405650602 NCBI chr15:52,625,550...53,688,003
Ensembl chr15:52,630,679...52,839,505 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:21958434 GO_REF:0000118 RGD:8657122 NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882 		JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 ISO RGD PMID:18971483 RGD:10449508 NCBI chr 3:39,429,928...39,512,623
Ensembl chr 3:39,432,058...39,512,601 		JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO (MGI:5825424|PMID:21849472) UniProt PMID:21849472 MGI:5825424 NCBI chr 1:205,081,227...205,285,359
Ensembl chr 1:205,081,231...205,285,364 		JBrowse link
G TMEM108 transmembrane protein 108 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:74,524,122...74,556,327
Ensembl chr13:74,180,198...74,555,928 		JBrowse link
G UBE3A ubiquitin protein ligase E3A ISO RGD PMID:25867122 RGD:11079590 NCBI chr 1:141,887,179...142,001,595
Ensembl chr 1:141,887,227...141,995,003 		JBrowse link
G WASF1 WASP family member 1 involved_in ISO (MGI:5825407|PMID:27605705) UniProt PMID:27605705 MGI:5825407 NCBI chr 1:76,107,595...76,180,335 JBrowse link
cellular response to epidermal growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR3 actin related protein 3 ISO RGD PMID:10209028 RGD:2306208 NCBI chr15:20,104,808...20,171,721
Ensembl chr15:20,104,812...20,167,421 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (MGI:5292318|PMID:21712384)
(PMID:30514904)		 UniProt PMID:21712384 PMID:30514904 MGI:5292318
G ARPC2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:15252126 RGD:2306210 NCBI chr15:120,297,122...120,328,795
Ensembl chr15:120,297,025...120,328,542 		JBrowse link
G BAG4 BAG cochaperone 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,299,456...48,348,810
Ensembl chr15:48,299,666...48,348,527 		JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:17855387 RGD:2306203 NCBI chr12:1,609,420...1,666,965
Ensembl chr12:1,603,540...1,670,075 		JBrowse link
G BECN1 beclin 1 ISO RGD PMID:20539009 RGD:6483081 NCBI chr12:20,041,914...20,054,249
Ensembl chr12:20,041,956...20,054,373 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19116644) Ensembl
MGI		 PMID:19116644 GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,492 		JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:23704350 PMID:26324884 RGD:11568705 RGD:11570555 NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035 		JBrowse link
G CFLAR CASP8 and FADD like apoptosis regulator ISO RGD PMID:16033771 RGD:11341689 NCBI chr15:104,780,744...104,835,631
Ensembl chr15:104,781,616...104,835,630 		JBrowse link
G COL1A1 collagen type I alpha 1 chain ISO RGD PMID:2016852 RGD:2316227 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G CRIPTO cripto, EGF-CFC family member involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G DAB2 DAB adaptor protein 2 involved_in ISO PMID:12473651 UniProt PMID:12473651 RGD:8553624 NCBI chr16:24,590,638...24,776,937
Ensembl chr16:24,590,645...24,646,122 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in ISO PMID:11812785 BHF-UCL PMID:11812785 RGD:632628 NCBI chr 1:261,732,280...261,859,833
Ensembl chr 1:261,659,660...261,859,022 		JBrowse link
G DUSP22 dual specificity phosphatase 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,437...96,270
Ensembl chr 7:43,487...96,267 		JBrowse link
G DUSP3 dual specificity phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,336,308...19,349,739
Ensembl chr12:19,336,354...19,349,734 		JBrowse link
G EEF1A1 eukaryotic translation elongation factor 1 alpha 1 involved_in ISO (PMID:9852145) UniProt PMID:9852145 NCBI chr 1:92,421,235...92,425,053
Ensembl chr 1:92,421,230...92,425,044 		JBrowse link
G EGFR epidermal growth factor receptor involved_in ISO PMID:20639532 UniProt PMID:20639532 RGD:8553583 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,475,589 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,591,621...22,621,384
Ensembl chr12:22,590,725...22,621,351 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8702723) Ensembl
MGI		 PMID:8702723 GO_REF:0000107 NCBI chr15:113,966,573...115,096,984
Ensembl chr15:113,974,437...115,096,565 		JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 ISO RGD PMID:15556944 RGD:9685545 NCBI chr 6:68,667,651...68,682,629
Ensembl chr 6:68,669,153...68,682,623 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8603605 RGD:151665808 NCBI chr 7:98,449,508...98,451,971
Ensembl chr 7:98,449,349...98,455,554 		JBrowse link
G FOXC1 forkhead box C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:837,088...840,593
Ensembl chr 7:837,171...838,805 		JBrowse link
G GAREM1 GRB2 associated regulator of MAPK1 subtype 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:116,100,371...116,324,853
Ensembl chr 6:116,100,372...116,325,133 		JBrowse link
G GIT1 GIT ArfGAP 1 ISO RGD PMID:18523162 RGD:13513208 NCBI chr12:45,768,172...45,783,652
Ensembl chr12:45,768,176...45,783,658 		JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:24018045 RGD:13792711 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,439...5,227,758 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:3062579 RGD:10041005 NCBI chr 5:19,485,033...19,491,418
Ensembl chr 5:19,485,096...19,491,417 		JBrowse link
G ID1 inhibitor of DNA binding 1 ISO RGD PMID:7623812 RGD:9686118 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,316,514...35,317,736 		JBrowse link
G IGFALS insulin like growth factor binding protein acid labile subunit ISO RGD PMID:8070348 RGD:12911020 NCBI chr 3:40,173,595...40,177,789
Ensembl chr 3:40,174,764...40,177,784 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,718,491...47,738,475 		JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,020,479...53,129,964
Ensembl chr 7:52,958,106...53,129,958 		JBrowse link
G IREB2 iron responsive element binding protein 2 ISO RGD PMID:10889193 RGD:12910555 NCBI chr 7:47,481,539...47,529,199
Ensembl chr 7:47,478,706...47,529,242 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,916,956...130,930,172
Ensembl chr 1:130,916,146...130,930,078 		JBrowse link
G LOC100739163 glutathione S-transferase P-like ISO RGD PMID:1908848 RGD:2317845 NCBI chr 2:4,978,761...4,982,233 JBrowse link
G MAPK1 mitogen-activated protein kinase 1 ISO RGD PMID:8246947 RGD:401976489 NCBI chr14:50,083,079...50,165,528
Ensembl chr14:50,082,896...50,165,513 		JBrowse link
G MARS1 methionyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,752,405...22,785,509
Ensembl chr 5:22,752,374...22,785,501 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 ISO RGD PMID:19821535 RGD:2316313 NCBI chr 3:8,005,890...8,014,047
Ensembl chr 3:8,005,900...8,014,053 		JBrowse link
G MED1 mediator complex subunit 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,841,205...22,872,409 		JBrowse link
G MUC5AC mucin 5AC, oligomeric mucus/gel-forming ISO RGD PMID:11769575 RGD:2324971 NCBI chr 2:757,897...790,321 JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078 		JBrowse link
G NCL nucleolin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8702723) Ensembl
MGI		 PMID:8702723 GO_REF:0000107 NCBI chr15:132,163,453...132,174,214
Ensembl chr15:132,162,516...132,174,172 		JBrowse link
G PAX2 paired box 2 ISO RGD PMID:11262416 RGD:2316756 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,823,308...111,913,969 		JBrowse link
G PDE8A phosphodiesterase 8A involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:52,410,766...52,558,482
Ensembl chr 7:52,410,779...52,557,645 		JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,429,928...39,512,623
Ensembl chr 3:39,432,058...39,512,601 		JBrowse link
G PLCG1 phospholipase C gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,810,003...43,844,553
Ensembl chr17:43,810,048...43,844,554 		JBrowse link
G PPP1R9B protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:10620493 RGD:10002737 NCBI chr12:26,319,123...26,337,089
Ensembl chr12:26,319,124...26,336,562 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,169...39,292,003 		JBrowse link
G PTPN12 protein tyrosine phosphatase non-receptor type 12 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:102,480,914...102,563,969
Ensembl chr 9:102,480,924...102,563,751 		JBrowse link
G RASA1 RAS p21 protein activator 1 ISO RGD PMID:2005883 RGD:10002731 NCBI chr 2:94,879,615...94,992,725
Ensembl chr 2:94,878,911...94,993,450 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:79,264,880...79,268,475
Ensembl chr 4:79,264,880...79,268,475 		JBrowse link
G SNX6 sorting nexin 6 ISO RGD PMID:18523162 RGD:13513208 NCBI chr 7:65,156,476...65,205,249
Ensembl chr 7:65,156,478...65,205,239 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G STAT5B signal transducer and activator of transcription 5B involved_in ISS UniProt GO_REF:0000024 NCBI chr12:20,498,103...20,574,365
Ensembl chr12:20,508,404...20,574,266 		JBrowse link
G SYAP1 synapse associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:13,181,948...13,206,948
Ensembl chr  X:13,181,953...13,208,341 		JBrowse link
G VIL1 villin 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:120,463,470...120,494,772
Ensembl chr15:120,463,566...120,492,580 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,407...97,204,698 		JBrowse link
G ZNF774 zinc finger protein 774 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:52,985,669...52,994,797
Ensembl chr 7:52,958,106...53,129,958 		JBrowse link
G ZPR1 ZPR1 zinc finger involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:44,167,422...44,178,137
Ensembl chr 9:44,167,423...44,177,435 		JBrowse link
cellular response to fibroblast growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL2 chemokine (C-C motif) ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026 		JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118 		JBrowse link
G CD44 CD44 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:25,788,699...25,884,209
Ensembl chr 2:25,788,703...25,884,153 		JBrowse link
G CDC5L cell division cycle 5 like ISO RGD PMID:11694351 RGD:10047049 NCBI chr 7:39,384,397...39,427,729
Ensembl chr 7:39,384,556...39,431,248 		JBrowse link
G COL1A1 collagen type I alpha 1 chain ISO RGD PMID:16972247 RGD:8552747 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 ISO FGF-4 RGD PMID:12832696 RGD:4144100 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,150,157...113,339,078 		JBrowse link
G CRIPTO cripto, EGF-CFC family member involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:12095987 RGD:728475 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:69,932,646...69,935,861
Ensembl chr 8:69,932,643...69,935,861 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO FGF-9 RGD PMID:17494997 RGD:2289861 NCBI chr 7:59,172,829...59,188,479
Ensembl chr 7:59,175,758...59,188,478 		JBrowse link
G CYP19A2 cytochrome P450 19A2 ISO FGF-8 RGD PMID:20434519 RGD:4890357 NCBI chr 1:120,652,172...120,695,899
Ensembl chr 1:120,367,667...120,695,899 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,376,720...130,386,411
Ensembl chr 1:130,376,721...130,386,411 		JBrowse link
G DSTYK dual serine/threonine and tyrosine protein kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:65,833,050...65,892,024
Ensembl chr 9:65,833,054...65,891,999 		JBrowse link
G EGR3 early growth response 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,943,184...6,948,507
Ensembl chr14:6,944,935...6,948,580 		JBrowse link
G ELN elastin ISO RGD PMID:11967999 RGD:9585657 NCBI chr 3:11,214,194...11,245,891
Ensembl chr 3:11,214,205...11,244,897 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850926), (PMID:21310272) Ensembl
MGI		 PMID:19850926 PMID:21310272 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G EXT2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO (PMID:21310272) MGI PMID:21310272 NCBI chr 2:18,099,790...18,239,229
Ensembl chr 2:18,209,102...18,232,025 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in ISO (PMID:21885851) BHF-UCL PMID:21885851 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO FGF-2 RGD PMID:9373031 PMID:28981091 RGD:12801444 RGD:155782905 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 5:33,725,432...33,852,952
Ensembl chr 5:33,725,444...33,849,953 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO RGD PMID:18042181 RGD:10402377 NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,565...27,253,530 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit ISO RGD PMID:18042181 RGD:10402377 NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,131 		JBrowse link
G HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 ISO FGF-9 RGD PMID:17494997 RGD:2289861 NCBI chr 4:101,565,229...101,574,110 JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793 		JBrowse link
G HYAL2 hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333 		JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,020,479...53,129,964
Ensembl chr 7:52,958,106...53,129,958 		JBrowse link
G ITGB1BP1 integrin subunit beta 1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:126,905,779...126,921,961
Ensembl chr 3:126,905,810...126,922,045 		JBrowse link
G KDM5B lysine demethylase 5B ISO RGD PMID:24142921 RGD:9587771 NCBI chr10:24,739,115...24,831,537
Ensembl chr10:24,736,838...24,831,447 		JBrowse link
G LHX1 LIM homeobox 1 involved_in ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078 		JBrowse link
G NDNF neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:103,047,783...103,094,800
Ensembl chr 8:102,996,281...103,088,230 		JBrowse link
G NR4A1 nuclear receptor subfamily 4, group A, member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,403,088...17,407,918
Ensembl chr 5:17,385,390...17,408,511 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:18189319 RGD:8552378 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha ISO RGD PMID:14593115 RGD:1581771 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441 		JBrowse link
G POSTN periostin ISO RGD PMID:16325820 RGD:10040989 NCBI chr11:13,225,183...13,258,973
Ensembl chr11:13,224,959...13,258,978 		JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 ISO RGD PMID:15271661 RGD:401965432 NCBI chr17:52,017,100...52,086,747
Ensembl chr17:52,017,130...52,086,736 		JBrowse link
G RASA1 RAS p21 protein activator 1 ISO RGD PMID:15530650 RGD:2324642 NCBI chr 2:94,879,615...94,992,725
Ensembl chr 2:94,878,911...94,993,450 		JBrowse link
G RUNX2 RUNX family transcription factor 2 ISO RGD PMID:12403780 RGD:1601650 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G SERPINE1 serpin family E member 1 ISO RGD PMID:10615432 RGD:8547892 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547 		JBrowse link
G SETX senataxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:272,093,449...272,170,857
Ensembl chr 1:272,095,358...272,170,747 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 ISO RGD PMID:9182671 RGD:730035 NCBI chr 4:79,264,880...79,268,475
Ensembl chr 4:79,264,880...79,268,475 		JBrowse link
G SNCA synuclein alpha ISO RGD PMID:12562524 RGD:6218994 NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,271,128 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO FGF-9
FGF2		 RGD PMID:17494997 PMID:19814654 RGD:2289861 RGD:4145611 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462 		JBrowse link
G TBX1 T-box transcription factor 1 involved_in ISO (MGI:5285152|PMID:20807544) UniProt PMID:20807544 MGI:5285152 NCBI chr14:51,289,376...51,297,110
Ensembl chr14:51,289,321...51,296,725 		JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:18617696 RGD:7421597 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
G VIM vimentin ISO RGD PMID:15195687 RGD:6480448 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,407...97,204,698 		JBrowse link
G ZNF774 zinc finger protein 774 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:52,985,669...52,994,797
Ensembl chr 7:52,958,106...53,129,958 		JBrowse link
cellular response to glial cell derived neurotrophic factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXC4 homeobox C4 ISO RGD PMID:19339709 RGD:2316287 NCBI chr 5:19,250,411...19,268,267
Ensembl chr 5:19,265,081...19,268,257 		JBrowse link
G PITX3 paired like homeodomain 3 ISO RGD PMID:21865882 RGD:6218962 NCBI chr14:113,230,194...113,241,393
Ensembl chr14:113,230,965...113,241,360 		JBrowse link
G RAP1GAP RAP1 GTPase activating protein ISO RGD PMID:20877310 RGD:9835042 NCBI chr 6:79,664,486...79,735,361
Ensembl chr 6:79,664,485...79,735,361 		JBrowse link
cellular response to hepatocyte growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,089,157...39,124,969
Ensembl chr13:39,089,077...39,129,781 		JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (MGI:5700256|PMID:26445298) UniProt PMID:26445298 MGI:5700256 NCBI chr 5:79,356,046...79,412,235
Ensembl chr 5:79,356,067...79,412,235 		JBrowse link
G BCAR1 BCAR1 scaffold protein, Cas family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,369,332...12,404,822
Ensembl chr 6:12,367,758...12,404,818 		JBrowse link
G CASR calcium sensing receptor ISO RGD PMID:21088907 RGD:7206832 NCBI chr13:138,279,785...138,364,934
Ensembl chr13:138,280,364...138,364,252 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21072211) Ensembl
MGI		 PMID:21072211 GO_REF:0000107 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,705,496...110,771,728 		JBrowse link
G CREBBP CREB binding protein acts_upstream_of_or_within ISO (PMID:21072211) MGI PMID:21072211 NCBI chr 3:38,388,366...38,530,243
Ensembl chr 3:38,388,547...38,530,224 		JBrowse link
G CRIPTO cripto, EGF-CFC family member involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO RGD PMID:20466058 RGD:10402379 NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,565...27,253,530 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit ISO RGD PMID:20466058 RGD:10402379 NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,131 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO (PMID:21072211) MGI PMID:21072211 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569 		JBrowse link
G HGF hepatocyte growth factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,437,771...98,513,573
Ensembl chr 9:98,438,143...98,513,564 		JBrowse link
G IL10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21072211) Ensembl
MGI		 PMID:21072211 GO_REF:0000107 NCBI chr 9:67,400,727...67,405,941
Ensembl chr 9:67,400,728...67,405,378 		JBrowse link
G IL6 interleukin 6 acts_upstream_of_or_within ISO (PMID:21072211) MGI PMID:21072211 NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263 		JBrowse link
G LGMN legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:114,176,217...114,210,096
Ensembl chr 7:114,173,693...114,217,102 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17438330) Ensembl
MGI		 PMID:17438330 GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,841,205...22,872,409 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:19834131 RGD:7241796 NCBI chr14:76,629,313...76,635,173
Ensembl chr14:76,629,299...76,635,172 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21072211) Ensembl
MGI		 PMID:21072211 GO_REF:0000107 NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,469 		JBrowse link
G VIL1 villin 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:120,463,470...120,494,772
Ensembl chr15:120,463,566...120,492,580 		JBrowse link
cellular response to nerve growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 involved_in ISO PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr13:132,274,229...132,431,442
Ensembl chr13:132,274,227...132,431,385 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in ISO PMID:20605787
(PMID:20605787)		 RGD
UniProt		 PMID:9492284 PMID:20605787 RGD:10402036 RGD:39128201
G APC APC regulator of WNT signaling pathway ISO RGD PMID:22399805 RGD:7245986 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,887 		JBrowse link
G APP amyloid beta precursor protein ISO RGD PMID:10821917 RGD:10054256 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,435,094...189,716,056 		JBrowse link
G ARF6 ADP ribosylation factor 6 involved_in ISO PMID:26446845 UniProt PMID:26446845 RGD:11554955 NCBI chr 1:179,697,582...179,717,299
Ensembl chr 1:179,713,299...179,717,841 		JBrowse link
G ARPC2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:10797548 RGD:11049163 NCBI chr15:120,297,122...120,328,795
Ensembl chr15:120,297,025...120,328,542 		JBrowse link
G ARPC3 actin related protein 2/3 complex subunit 3 ISO RGD PMID:10797548 RGD:11049163 NCBI chr14:31,814,382...31,823,452
Ensembl chr14:31,814,151...31,826,855 		JBrowse link
G BCL2L11 BCL2 like 11 ISO RGD PMID:12388545 RGD:704413 NCBI chr 3:45,156,791...45,202,996
Ensembl chr 3:45,160,155...45,201,186 		JBrowse link
G BDNF brain derived neurotrophic factor ISO RGD PMID:21958434 RGD:8657122 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,624,048...32,679,765 		JBrowse link
G BPTF bromodomain PHD finger transcription factor ISO RGD PMID:11640947 RGD:9586055 NCBI chr12:14,112,943...14,254,810
Ensembl chr12:14,112,718...14,254,790 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase ISO RGD PMID:12138204 RGD:11567269 NCBI chr18:8,957,963...9,132,558
Ensembl chr18:8,957,991...9,132,553 		JBrowse link
G CALCB calcitonin-related polypeptide beta acts_upstream_of_or_within ISO (PMID:24760869) RGD
MGI		 PMID:21958434 PMID:24760869 RGD:8657122 NCBI chr 2:44,043,135...44,048,651 JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:19546888 RGD:11038823 NCBI chr 9:46,416,937...46,512,855
Ensembl chr 9:46,416,938...46,512,834 		JBrowse link
G CDC5L cell division cycle 5 like ISO RGD PMID:20629186 RGD:10045890 NCBI chr 7:39,384,397...39,427,729
Ensembl chr 7:39,384,556...39,431,248 		JBrowse link
G CIB1 calcium and integrin binding 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,794,834...55,798,666
Ensembl chr 7:55,794,836...55,798,590 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:18193038 RGD:10059421 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,705,496...110,771,728 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein ISO RGD PMID:15128873 RGD:1642627 NCBI chr12:47,656,805...47,685,641
Ensembl chr12:47,657,865...47,685,908 		JBrowse link
G CSNK1D casein kinase 1 delta ISO RGD PMID:21698236 RGD:10059659 NCBI chr12:768,856...794,495
Ensembl chr12:768,865...796,595 		JBrowse link
G CSNK1E casein kinase 1 epsilon ISO RGD PMID:21698236 RGD:10059659 NCBI chr 5:9,594,461...9,620,483
Ensembl chr 5:9,594,934...9,620,476 		JBrowse link
G CSTF2 cleavage stimulation factor subunit 2 ISO RGD PMID:23948079 RGD:9686373 NCBI chr  X:82,508,739...82,540,861
Ensembl chr  X:82,508,736...82,540,863 		JBrowse link
G DNMT1 DNA methyltransferase 1 ISO RGD PMID:10407183 RGD:9588607 NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,566...69,029,844 		JBrowse link
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8922673 RGD:13207348
G DYNC1I2 dynein cytoplasmic 1 intermediate chain 2 ISO RGD PMID:11536324 RGD:13207410 NCBI chr15:77,803,601...77,859,559
Ensembl chr15:77,803,350...77,860,041 		JBrowse link
G DYNC1LI1 dynein cytoplasmic 1 light intermediate chain 1 ISO RGD PMID:11536324 RGD:13207410 NCBI chr13:18,507,710...18,558,057
Ensembl chr13:18,506,194...18,558,007 		JBrowse link
G DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 ISO RGD PMID:11536324 RGD:13207410 NCBI chr 6:27,416,475...27,446,172
Ensembl chr 6:27,416,477...27,446,360 		JBrowse link
G E2F1 E2F transcription factor 1 ISO RGD PMID:18367454 RGD:8693614 NCBI chr17:37,178,587...37,190,118
Ensembl chr17:37,178,599...37,189,883 		JBrowse link
G EEF1A1 eukaryotic translation elongation factor 1 alpha 1 ISO RGD PMID:11907030 RGD:1304240 NCBI chr 1:92,421,235...92,425,053
Ensembl chr 1:92,421,230...92,425,044 		JBrowse link
G EHD1 EH domain containing 1 involved_in ISO PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr 2:7,299,295...7,321,580
Ensembl chr 2:7,298,208...7,321,576 		JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 ISO RGD PMID:9514914 PMID:12859688 RGD:1579855 RGD:9685344 NCBI chr 6:161,784,146...161,928,953
Ensembl chr 6:161,785,770...161,928,910 		JBrowse link
G EP300 E1A binding protein p300 ISO RGD PMID:20399742 RGD:7364749 NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:9011767 RGD:10402043 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FOXO3 forkhead box O3 ISO RGD PMID:24183892 RGD:9495918 NCBI chr 1:74,626,673...74,760,323
Ensembl chr 1:74,628,218...74,760,325 		JBrowse link
G HES1 hes family bHLH transcription factor 1 ISO RGD PMID:9389649 RGD:9685378 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:10936191 RGD:11354963 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,894 		JBrowse link
G ID1 inhibitor of DNA binding 1 ISO RGD PMID:7623812 RGD:9686118 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,316,514...35,317,736 		JBrowse link
G KAT2A lysine acetyltransferase 2A ISO RGD PMID:15496412 RGD:2312271 NCBI chr12:20,638,493...20,647,464
Ensembl chr12:20,638,497...20,647,461 		JBrowse link
G KIDINS220 kinase D interacting substrate 220 involved_in ISO PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 3:127,382,587...127,477,753
Ensembl chr 3:127,382,611...127,474,195 		JBrowse link
G KIF1B kinesin family member 1B ISO RGD PMID:24469107 RGD:12738402 NCBI chr 6:70,495,143...70,663,464
Ensembl chr 6:70,495,144...70,661,798 		JBrowse link
G KIF5A kinesin family member 5A ISO RGD PMID:8963445 RGD:12793074 NCBI chr 5:22,813,617...22,851,976
Ensembl chr 5:22,816,854...22,851,973 		JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:3511068 RGD:11570521 NCBI chr  X:124,595,649...124,618,292
Ensembl chr  X:124,595,651...124,618,307 		JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:25412834 RGD:126781755 NCBI chr 1:268,609,975...268,614,651
Ensembl chr 1:268,609,887...268,614,644 		JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 9:100,846,693...102,171,199
Ensembl chr 9:100,847,013...102,170,004 		JBrowse link
G MICALL1 MICAL like 1 involved_in ISO PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr 5:9,924,648...9,956,998
Ensembl chr 5:9,924,652...9,956,946 		JBrowse link
G MIR221 microRNA mir-221 ISO RGD PMID:19438724 RGD:152025188 NCBI chr  X:40,571,068...40,571,137
Ensembl chr  X:40,571,068...40,571,137 		JBrowse link
G MIR222 microRNA mir-222 ISO RGD PMID:19438724 RGD:152025188 NCBI chr  X:40,571,808...40,571,887
Ensembl chr  X:40,571,808...40,571,887 		JBrowse link
G MYOC myocilin ISO RGD PMID:17663725 RGD:7401258 NCBI chr 9:114,087,370...114,098,765
Ensembl chr 9:114,087,378...114,098,745 		JBrowse link
G NF1 neurofibromin 1 ISO RGD PMID:8892969 RGD:12789704 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,813...43,753,969 		JBrowse link
G NRG1 neuregulin 1 ISO RGD PMID:26043693 RGD:405650602 NCBI chr15:52,625,550...53,688,003
Ensembl chr15:52,630,679...52,839,505 		JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:24760869) Ensembl
TreeGrafter
MGI
GO_Central		 PMID:24760869 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,255,981 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 ISO RGD PMID:21958434 RGD:8657122 NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:191,535,262...191,941,675
Ensembl chr 1:191,535,301...191,925,327 		JBrowse link
G NTS neurotensin ISO RGD PMID:7898306 RGD:9743905 NCBI chr 5:96,261,299...96,272,947
Ensembl chr 5:96,260,560...96,272,976 		JBrowse link
G OPTN optineurin ISO RGD PMID:17663725 RGD:7401258 NCBI chr10:48,532,029...48,582,952
Ensembl chr10:48,530,843...48,582,860 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:16093393 RGD:1601081 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196 		JBrowse link
G PTEN phosphatase and tensin homolog ISO RGD PMID:10662831 RGD:12801496 NCBI chr14:99,929,590...100,021,619 JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 ISO RGD PMID:18796006 RGD:401965471 NCBI chr17:52,017,100...52,086,747
Ensembl chr17:52,017,130...52,086,736 		JBrowse link
G RAB35 RAB35, member RAS oncogene family involved_in ISO PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr14:40,124,318...40,141,261
Ensembl chr14:40,124,326...40,141,668 		JBrowse link
G RAP1A RAP1A, member of RAS oncogene family involved_in ISO PMID:17724123 RGD
UniProt		 PMID:17724123 PMID:17822405 RGD:10040965 RGD:8554481 NCBI chr 4:108,675,537...108,750,952
Ensembl chr 4:108,676,685...108,743,368 		JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 involved_in ISO (PMID:17724123) UniProt PMID:17724123 NCBI chr 1:271,494,243...271,624,609
Ensembl chr 1:271,494,248...271,600,920 		JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISO PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 8:48,183,518...48,277,476
Ensembl chr 8:48,021,604...48,277,454 		JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 ISO RGD PMID:25126967 RGD:9850100 NCBI chr15:78,773,270...79,094,490
Ensembl chr15:78,773,266...79,095,040 		JBrowse link
G RPL8 ribosomal protein L8 ISO RGD PMID:11922865 RGD:11039448 NCBI chr 4:136,105...138,651
Ensembl chr 4:136,107...138,652 		JBrowse link
G RPL9 ribosomal protein L9 ISO RGD PMID:11922865 RGD:11039448 NCBI chr 8:30,693,198...30,699,189
Ensembl chr 8:30,694,388...30,699,189 		JBrowse link
G RPS3 ribosomal protein S3 involved_in ISO PMID:20605787 UniProt PMID:20605787 RGD:10402036 NCBI chr 9:9,612,939...9,630,404
Ensembl chr 9:9,624,990...9,630,401 		JBrowse link
G SERPINE1 serpin family E member 1 ISO RGD PMID:21596853 RGD:8547918 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547 		JBrowse link
G SNX27 sorting nexin 27 ISO RGD PMID:16076023 RGD:13508621 NCBI chr 4:97,533,643...97,620,816
Ensembl chr 4:97,525,181...97,620,788 		JBrowse link
G STMN2 stathmin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:56,952,968...57,006,744
Ensembl chr 4:56,952,978...57,006,462 		JBrowse link
G STMN3 stathmin 3 ISO RGD PMID:16038898 RGD:1582420 NCBI chr17:62,600,450...62,609,851
Ensembl chr17:62,600,455...62,609,018 		JBrowse link
G TAC1 tachykinin precursor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24760869) Ensembl
MGI		 PMID:24760869 GO_REF:0000107 NCBI chr 9:77,197,403...77,206,529
Ensembl chr 9:77,197,536...77,206,523 		JBrowse link
G TRPV1 transient receptor potential cation channel subfamily V member 1 ISO RGD PMID:21958434 RGD:8657122 NCBI chr12:49,676,536...49,709,634
Ensembl chr12:49,677,291...49,713,977 		JBrowse link
G USP8 ubiquitin specific peptidase 8 ISO RGD PMID:25662281 RGD:11053004 NCBI chr 1:121,306,031...121,376,154
Ensembl chr 1:121,306,032...121,413,223 		JBrowse link
cellular response to platelet-derived growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARPC2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:22619279 RGD:10047170 NCBI chr15:120,297,122...120,328,795
Ensembl chr15:120,297,025...120,328,542 		JBrowse link
G ATP7A ATPase copper transporting alpha ISO RGD PMID:20671235 RGD:11341707 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:15128873 RGD:1642627 NCBI chr 9:46,416,937...46,512,855
Ensembl chr 9:46,416,938...46,512,834 		JBrowse link
G CCL2 chemokine (C-C motif) ligand 2 ISO RGD PMID:7589574 RGD:8549588 NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026 		JBrowse link
G CCNA2 cyclin A2 ISO RGD PMID:18667424 RGD:10054494 NCBI chr 8:102,260,346...102,266,274
Ensembl chr 8:102,260,215...102,266,309 		JBrowse link
G CORO1B coronin 1B involved_in ISO
IEA		 RGD
Ensembl		 PMID:22619279 GO_REF:0000107 RGD:10047170 NCBI chr 2:5,081,294...5,086,698
Ensembl chr 2:5,080,660...5,086,690 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:21505978 RGD:10059431 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,705,496...110,771,728 		JBrowse link
G DNMT1 DNA methyltransferase 1 ISO RGD PMID:23423710 RGD:9588226 NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,566...69,029,844 		JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 ISO RGD PMID:15556944 RGD:9685545 NCBI chr 6:68,667,651...68,682,629
Ensembl chr 6:68,669,153...68,682,623 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:15627306 RGD:7205462 NCBI chr15:117,658,158...117,737,145
Ensembl chr15:117,658,099...117,731,014 		JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:17623777) MGI PMID:17623777 NCBI chr 1:77,584,675...77,810,605
Ensembl chr 1:77,585,439...77,810,581 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in IDA (PMID:18239136) AgBase PMID:18239136 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,528...41,002,156 		JBrowse link
G GJA5 gap junction protein alpha 5 involved_in IDA (PMID:18239136) AgBase PMID:18239136 NCBI chr 4:99,854,129...99,871,288
Ensembl chr 4:99,854,392...99,871,286 		JBrowse link
G HAS1 hyaluronan synthase 1 involved_in ISO (PMID:17324121) UniProt PMID:17324121 NCBI chr 6:58,303,274...58,313,486
Ensembl chr 6:58,302,799...58,313,486 		JBrowse link
G HDAC1 histone deacetylase 1 involved_in ISO PMID:28867608 BHF-UCL PMID:28867608 RGD:150521633 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,411 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793 		JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,020,479...53,129,964
Ensembl chr 7:52,958,106...53,129,958 		JBrowse link
G ITGB3 integrin subunit beta 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22984613) Ensembl
MGI		 PMID:22984613 GO_REF:0000107 NCBI chr12:16,694,466...16,752,228
Ensembl chr12:16,693,514...16,752,292 		JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:14708940 RGD:10412060 NCBI chr 3:106,300,748...106,724,538
Ensembl chr 3:106,300,750...106,724,737 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 ISO RGD PMID:8246947 RGD:401976489 NCBI chr14:50,083,079...50,165,528
Ensembl chr14:50,082,896...50,165,513 		JBrowse link
G MARS1 methionyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,752,405...22,785,509
Ensembl chr 5:22,752,374...22,785,501 		JBrowse link
G MIR125A microRNA mir-125a ISO RGD PMID:30156956 RGD:26884369 NCBI chr 6:58,331,566...58,331,645
Ensembl chr 6:58,331,566...58,331,645 		JBrowse link
G MTSS2 MTSS I-BAR domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:13,660,388...13,682,311
Ensembl chr 6:13,660,392...13,682,316 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078 		JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:8888698 RGD:11533927 NCBI chr 5:11,365,603...11,456,475
Ensembl chr 5:11,360,660...11,456,472 		JBrowse link
G NOX1 NADPH oxidase 1 ISO RGD PMID:23706097 RGD:329955579 NCBI chr  X:82,540,664...82,575,811
Ensembl chr  X:82,540,667...82,586,532 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 ISO RGD PMID:11882580 RGD:11556216 NCBI chr 1:228,854,587...229,308,054
Ensembl chr 1:228,854,595...229,308,906 		JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in ISO (MGI:6827319|PMID:28867608) BHF-UCL PMID:28867608 MGI:6827319 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G PDGFD platelet derived growth factor D ISO RGD PMID:16039137 RGD:1581755 NCBI chr 9:34,388,636...34,621,227
Ensembl chr 9:34,388,643...34,621,244 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (MGI:5462034|PMID:21880694) BHF-UCL PMID:21880694 MGI:5462034 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944 		JBrowse link
G PRKCE protein kinase C epsilon involved_in ISO PMID:22619279 UniProt PMID:22619279 RGD:10047170 NCBI chr 3:94,351,277...94,864,549
Ensembl chr 3:94,349,889...94,866,306 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:16226713 RGD:9834996 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,787...12,309,044 		JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 ISO RGD PMID:15271661 PMID:18456732 RGD:401965432 RGD:401976379 NCBI chr17:52,017,100...52,086,747
Ensembl chr17:52,017,130...52,086,736 		JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D ISO RGD PMID:35848503 RGD:401976433 NCBI chr 1:211,832,409...214,013,013
Ensembl chr 1:213,483,348...214,009,893 		JBrowse link
G RASA1 RAS p21 protein activator 1 ISO RGD PMID:9612285 RGD:10002728 NCBI chr 2:94,879,615...94,992,725
Ensembl chr 2:94,878,911...94,993,450 		JBrowse link
G RDX radixin ISO RGD PMID:8647942 RGD:8693616 NCBI chr 9:38,243,608...38,299,561
Ensembl chr 9:38,220,447...38,322,097 		JBrowse link
G SERPINE1 serpin family E member 1 ISO RGD PMID:10615432 RGD:8547892 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547 		JBrowse link
G SHAS2 hyaluronan synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,492...17,615,480 		JBrowse link
G SLIT2 slit guidance ligand 2 ISO RGD PMID:21315131 RGD:243048460 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,758,335...15,149,510 		JBrowse link
G SPON2 spondin 2 ISO RGD PMID:25751394 RGD:329328927 NCBI chr 8:447,176...450,829
Ensembl chr 8:447,180...450,538 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17623777) RGD
MGI
Ensembl		 PMID:11417999 PMID:17623777 GO_REF:0000107 RGD:150524323 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
G SYAP1 synapse associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:13,181,948...13,206,948
Ensembl chr  X:13,181,953...13,208,341 		JBrowse link
G TAGLN transgelin ISO RGD PMID:34694145 RGD:155883160 NCBI chr 9:44,561,756...44,567,385
Ensembl chr 9:44,560,785...44,567,385 		JBrowse link
G TLR4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:258,044,610...258,054,641
Ensembl chr 1:258,044,610...258,058,970 		JBrowse link
G YES1 YES proto-oncogene 1, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:17623777) MGI PMID:17623777 NCBI chr 6:105,505,944...105,600,694
Ensembl chr 6:105,505,479...105,600,687 		JBrowse link
G ZNF774 zinc finger protein 774 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:52,985,669...52,994,797
Ensembl chr 7:52,958,106...53,129,958 		JBrowse link
cellular response to transforming growth factor beta stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO RGD PMID:15629889 RGD:8693572 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708 		JBrowse link
G ACTA2 actin alpha 2, smooth muscle ISO RGD PMID:17043753 RGD:2292410 NCBI chr14:100,868,145...100,886,732
Ensembl chr14:100,867,733...100,886,713 		JBrowse link
G ACTR3 actin related protein 3 ISO RGD PMID:22319661 RGD:11530045 NCBI chr15:20,104,808...20,171,721
Ensembl chr15:20,104,812...20,167,421 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G ADGRE1 adhesion G protein-coupled receptor E1 ISO RGD PMID:23110133 RGD:151665477 NCBI chr 2:72,217,036...72,305,925 JBrowse link
G AKR1C3 aldo-keto reductase family 1 member C3 ISO RGD PMID:2401226 RGD:10053613 NCBI chr10:65,650,223...65,679,878
Ensembl chr10:65,576,464...65,678,248 		JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:102,603,777...102,612,857
Ensembl chr14:102,603,777...102,612,839 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 ISO RGD PMID:11003619 RGD:2325753 NCBI chr 5:85,166,616...85,258,751
Ensembl chr 5:85,166,628...85,258,364 		JBrowse link
G ARG1 arginase 1 ISO RGD PMID:12069499 RGD:634666 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,046...32,028,988 		JBrowse link
G CALCR calcitonin receptor ISO RGD PMID:23110133 RGD:151665477 NCBI chr 9:73,279,874...73,403,516
Ensembl chr 9:73,279,879...73,403,436 		JBrowse link
G CAV1 caveolin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21829547) Ensembl
MGI		 PMID:21829547 GO_REF:0000107 NCBI chr18:29,648,120...29,682,451
Ensembl chr18:29,649,992...29,682,465 		JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO RGD PMID:20429874 RGD:4889909 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118 		JBrowse link
G CCR1 C-C motif chemokine receptor 1 ISO RGD PMID:23110133 RGD:151665477 NCBI chr13:29,227,218...29,233,862
Ensembl chr13:29,227,222...29,233,960 		JBrowse link
G CCR5 C-C motif chemokine receptor 5 ISO RGD PMID:23110133 RGD:151665477 NCBI chr13:29,382,383...29,387,902
Ensembl chr13:29,383,303...29,387,895 		JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B ISO RGD PMID:11369440 RGD:11252200 NCBI chr 1:200,666,250...200,770,880
Ensembl chr 1:200,761,004...200,766,056 		JBrowse link
G CLDN1 claudin 1 ISO RGD PMID:18031476 RGD:11344898 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CLEC3B C-type lectin domain family 3 member B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:28,219,241...28,229,113
Ensembl chr13:28,219,500...28,229,096 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in ISO PMID:19362560 RGD
UniProt		 PMID:19362560 PMID:23560091 RGD:8552683 RGD:8554531 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G COL4A2 collagen type IV alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,996,885...77,161,617
Ensembl chr11:76,997,516...77,161,614 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:21308733 RGD:10059386 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,705,496...110,771,728 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein ISO RGD PMID:12837295 RGD:11568682 NCBI chr12:47,656,805...47,685,641
Ensembl chr12:47,657,865...47,685,908 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:50,528,950...50,558,664
Ensembl chr14:50,528,955...50,558,662 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:23110133 RGD:151665477 NCBI chr 2:151,102,138...151,130,311
Ensembl chr 2:151,102,147...151,147,633 		JBrowse link
G CTSK cathepsin K ISO RGD PMID:23110133 RGD:151665477 NCBI chr 4:98,389,459...98,404,969
Ensembl chr 4:98,391,428...98,404,961 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISO RGD PMID:12446007 RGD:4892023 NCBI chr13:23,944,386...23,957,567
Ensembl chr13:23,944,369...23,957,486 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO FSH-stimulated granulosa cells RGD PMID:18511507 RGD:4781450 NCBI chr 7:59,172,829...59,188,479
Ensembl chr 7:59,175,758...59,188,478 		JBrowse link
G DAB2 DAB adaptor protein 2 involved_in ISO (MGI:5442512|PMID:15894542), (MGI:5442513|PMID:15734730) RGD
UniProt		 PMID:15734730 PMID:15894542 PMID:21762377 MGI:5442512 MGI:5442513 RGD:7243156 NCBI chr16:24,590,638...24,776,937
Ensembl chr16:24,590,645...24,646,122 		JBrowse link
G DBN1 drebrin 1 ISO RGD PMID:22319661 RGD:11530045 NCBI chr 2:80,480,603...80,495,797
Ensembl chr 2:80,479,460...80,495,796 		JBrowse link
G DCSTAMP dendrocyte expressed seven transmembrane protein ISO RGD PMID:23110133 RGD:151665477 NCBI chr 4:32,912,320...32,928,323
Ensembl chr 4:32,913,152...32,928,235 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 ISO RGD PMID:16087782 RGD:150429767 NCBI chr 4:87,749,738...87,911,818
Ensembl chr 4:87,756,168...87,911,296 		JBrowse link
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:78,186,667...78,191,788
Ensembl chr15:78,185,790...78,191,226 		JBrowse link
G DNMT1 DNA methyltransferase 1 ISO RGD PMID:24211420 RGD:9588224 NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,566...69,029,844 		JBrowse link
G EDN1 endothelin 1 ISO RGD PMID:8439651 RGD:8662306 NCBI chr 7:8,752,018...8,758,354
Ensembl chr 7:8,751,695...8,758,348 		JBrowse link
G ELN elastin ISO RGD PMID:9224206 RGD:9585659 NCBI chr 3:11,214,194...11,245,891
Ensembl chr 3:11,214,205...11,244,897 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:24157151 RGD:13204713 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329) Ensembl
MGI		 PMID:18794329 GO_REF:0000107 NCBI chr15:31,159,214...31,295,891
Ensembl chr15:31,159,223...31,295,893 		JBrowse link
G FBN1 fibrillin 1 ISO RGD PMID:11012893 RGD:7387263 NCBI chr 1:123,102,011...123,359,649
Ensembl chr 1:123,102,009...123,359,649 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO RGD PMID:12648559 RGD:12801436 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:16669970 RGD:1626090 NCBI chr15:117,658,158...117,737,145
Ensembl chr15:117,658,099...117,731,014 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:23110133 RGD:151665477 NCBI chr 7:98,449,508...98,451,971
Ensembl chr 7:98,449,349...98,455,554 		JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:21829547) MGI PMID:21829547 NCBI chr 1:77,584,675...77,810,605
Ensembl chr 1:77,585,439...77,810,581 		JBrowse link
G HDAC2 histone deacetylase 2 ISO RGD PMID:19553350 RGD:9590229 NCBI chr 1:79,867,713...79,901,597
Ensembl chr 1:79,863,094...79,901,585 		JBrowse link
G HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 ISO FSH-stimulated granulosa cells RGD PMID:18511507 RGD:4781450 NCBI chr 4:101,565,229...101,574,110 JBrowse link
G HYAL2 hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333 		JBrowse link
G ID1 inhibitor of DNA binding 1 ISO RGD PMID:16628634 RGD:9686088 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,316,514...35,317,736 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:12837295 RGD:11568682 NCBI chr 1:137,383,623...137,691,038
Ensembl chr 1:137,387,825...137,691,058 		JBrowse link
G ISL1 ISL LIM homeobox 1 ISO RGD PMID:23270756 RGD:13210526 NCBI chr16:30,962,994...30,974,201
Ensembl chr16:30,963,000...30,973,907 		JBrowse link
G KDM6A lysine demethylase 6A ISO RGD PMID:31266808 RGD:151665138 NCBI chr  X:39,953,764...40,154,197
Ensembl chr  X:39,953,814...40,154,029 		JBrowse link
G KMT2A lysine methyltransferase 2A ISO RGD PMID:31570196 RGD:155888490 NCBI chr 9:45,743,566...45,828,559
Ensembl chr 9:45,743,397...45,824,884 		JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:16686695 RGD:6483452 NCBI chr  X:124,595,649...124,618,292
Ensembl chr  X:124,595,651...124,618,307 		JBrowse link
G LIMS1 LIM zinc finger domain containing 1 involved_in ISO (PMID:21390327) UniProt PMID:21390327 NCBI chr 3:47,607,737...47,704,921
Ensembl chr 3:47,606,230...47,672,884 		JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 ISO RGD PMID:16125722 PMID:32581266 RGD:155804267 RGD:155804294 NCBI chr 1:58,482,046...58,548,087
Ensembl chr 1:58,481,956...58,548,057 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 ISO RGD PMID:33409963 RGD:401794430 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,877...31,862,031 		JBrowse link
G MAPK7 mitogen-activated protein kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,144,138...60,148,743
Ensembl chr12:60,144,136...60,158,739 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MIR125A microRNA mir-125a ISO RGD PMID:29700287 RGD:26884455 NCBI chr 6:58,331,566...58,331,645
Ensembl chr 6:58,331,566...58,331,645 		JBrowse link
G MIR130A microRNA mir-130a involved_in ISO (PMID:28467929) ARUK-UCL PMID:28467929 NCBI chr 2:13,296,695...13,296,773
Ensembl chr 2:13,296,695...13,296,773 		JBrowse link
G MIR142 microRNA mir-142 involved_in ISO (PMID:24558198) BHF-UCL PMID:24558198 NCBI chr12:34,609,378...34,609,457
Ensembl chr12:34,609,364...34,609,468 		JBrowse link
G MIR155 microRNA mir-155 acts_upstream_of_or_within ISO (PMID:24391219) MGI PMID:24391219 NCBI chr13:189,138,822...189,138,902
Ensembl chr13:189,138,822...189,138,902 		JBrowse link
G MIR192 microRNA mir-192 acts_upstream_of_or_within ISO (PMID:20393144) MGI PMID:20393144 NCBI chr 2:7,285,667...7,285,746
Ensembl chr 2:7,285,667...7,285,746 		JBrowse link
G MIR21 microRNA mir-21 acts_upstream_of_or_within ISO (PMID:24391219) MGI PMID:24391219 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G MIR27A microRNA mir-27a involved_in ISO (PMID:28791023) ARUK-UCL PMID:28791023 NCBI chr 2:65,308,294...65,308,375
Ensembl chr 2:65,308,294...65,308,375 		JBrowse link
G MUC4 mucin 4, cell surface associated ISO RGD PMID:9857062 RGD:2324952 NCBI chr13:134,192,412...134,248,435 JBrowse link
G NFATC1 nuclear factor of activated T cells 1 ISO RGD PMID:23110133 RGD:151665477 NCBI chr 1:145,940,099...146,002,897
Ensembl chr 1:145,911,046...146,008,139 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:157,261,419...157,273,119
Ensembl chr13:157,261,419...157,272,688 		JBrowse link
G NOS3 nitric oxide synthase 3 ISO RGD PMID:21792926 RGD:8662393 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,158...6,228,943 		JBrowse link
G NOX4 NADPH oxidase 4 ISO RGD PMID:18845355 RGD:2324663 NCBI chr 9:22,622,105...22,776,691
Ensembl chr 9:22,624,212...22,776,534 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:144,822,937...144,956,451
Ensembl chr 2:144,822,939...144,956,451 		JBrowse link
G PAK2 p21 (RAC1) activated kinase 2 ISO RGD PMID:15629889 RGD:8693572 NCBI chr13:133,276,122...133,383,506
Ensembl chr13:133,273,112...133,389,458 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:22073128 PMID:23260200 RGD:10413908 RGD:8554355 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196 		JBrowse link
G PDCD5 programmed cell death 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,483,653...42,491,589
Ensembl chr 6:42,483,449...42,491,591 		JBrowse link
G PDE2A phosphodiesterase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964 		JBrowse link
G PDE3A phosphodiesterase 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:52,413,503...52,737,771
Ensembl chr 5:52,409,882...52,738,406 		JBrowse link
G PDGFA platelet derived growth factor subunit A ISO RGD PMID:16039137 RGD:1581755 NCBI chr 3:296,399...322,967
Ensembl chr 3:301,584...321,712 		JBrowse link
G PDGFD platelet derived growth factor D ISO RGD PMID:23585135 RGD:9854632 NCBI chr 9:34,388,636...34,621,227
Ensembl chr 9:34,388,643...34,621,244 		JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chr 1:127,786,174...127,814,096
Ensembl chr 1:127,785,772...127,814,196 		JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,649,044...14,723,293 		JBrowse link
G PENK proenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chr 4:75,525,497...75,530,403
Ensembl chr 4:75,525,555...75,530,876 		JBrowse link
G POSTN periostin ISO RGD PMID:22886209 RGD:10040993 NCBI chr11:13,225,183...13,258,973
Ensembl chr11:13,224,959...13,258,978 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO with follicle-stimulating hormone RGD PMID:18511507 RGD:4781450 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,946,992 		JBrowse link
G PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21829547) Ensembl
MGI		 PMID:21829547 GO_REF:0000107 NCBI chr 1:189,248,974...189,296,147
Ensembl chr 1:189,207,577...189,291,345 		JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:21829547) MGI PMID:21829547 NCBI chr 4:2,656,606...2,896,060
Ensembl chr 4:2,656,614...2,896,054 		JBrowse link
G RAPGEF3 Rap guanine nucleotide exchange factor 3 ISO RGD PMID:23845590 RGD:9835377 NCBI chr 5:78,101,286...78,134,150
Ensembl chr 5:78,101,299...78,134,105 		JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IGI (PMID:26634652) BHF-UCL PMID:26634652 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,989...106,314,944 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IGI (PMID:26634652) BHF-UCL PMID:26634652 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,352,920...125,493,362 		JBrowse link
G RUNX1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr13:198,371,835...198,635,648
Ensembl chr13:198,371,837...198,638,189 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:3796269|PMID:18498113), (MGI:5294319|PMID:9328840) UniProt PMID:9328840 PMID:18498113 MGI:3796269 MGI:5294319 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G SERPINE1 serpin family E member 1 acts_upstream_of_or_within ISO (PMID:21829547) RGD
MGI		 PMID:19247458 PMID:21829547 RGD:8547745 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G SMAD2 SMAD family member 2 ISO RGD PMID:33409963 RGD:401794430 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SMAD3 SMAD family member 3 involved_in IEA
ISO		 Ensembl
RGD		 PMID:33409963 GO_REF:0000107 RGD:401794430 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G SMAD7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:98,512,800...98,543,924
Ensembl chr 1:98,514,267...98,542,382 		JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 ISO RGD PMID:10022522 RGD:10448942 NCBI chr 6:54,288,354...54,304,272
Ensembl chr 6:54,288,397...54,304,103 		JBrowse link
G SOX5 SRY-box transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:49,159,950...50,166,463
Ensembl chr 5:49,504,551...50,161,558 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21829547) Ensembl
MGI		 PMID:21829547 GO_REF:0000107 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO FSH-stimulated granulosa cells RGD PMID:18511507 RGD:4781450 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462 		JBrowse link
G STK16 serine/threonine kinase 16 ISO RGD PMID:10947953 RGD:727297 NCBI chr15:121,285,065...121,288,475
Ensembl chr15:121,284,920...121,288,473 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:23861879) AgBase
MGI		 PMID:23861879 GO_REF:0000024 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:36,736,049...36,888,702
Ensembl chr  X:36,760,865...36,885,250 		JBrowse link
G WNT10A Wnt family member 10A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:120,925,204...120,939,032
Ensembl chr15:120,925,499...120,938,430 		JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:28,945,825...28,993,969
Ensembl chr18:28,946,326...28,993,961 		JBrowse link
G WNT4 Wnt family member 4 involved_in ISO (PMID:15040835) UniProt PMID:15040835 NCBI chr 6:80,110,238...80,138,165 JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G WWOX WW domain containing oxidoreductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:8,910,209...9,871,048
Ensembl chr 6:8,910,138...9,871,053 		JBrowse link
G XCL1 chemokine (C motif) ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:82,432,845...82,436,150
Ensembl chr 4:82,432,204...82,436,180 		JBrowse link
G YES1 YES proto-oncogene 1, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:21829547) MGI PMID:21829547 NCBI chr 6:105,505,944...105,600,694
Ensembl chr 6:105,505,479...105,600,687 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 ISO RGD PMID:16824956 RGD:2325877 NCBI chr10:42,013,114...42,216,139
Ensembl chr10:42,013,084...42,214,205 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,017...92,495,554 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,407...97,204,698 		JBrowse link
cellular response to vascular endothelial growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (PMID:25139353) MGI PMID:25139353
G ANXA1 annexin A1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:226,414,200...226,431,963
Ensembl chr 1:226,414,306...226,432,279 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:261,732,280...261,859,833
Ensembl chr 1:261,659,660...261,859,022 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,376,720...130,386,411
Ensembl chr 1:130,376,721...130,386,411 		JBrowse link
G EGR3 early growth response 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,943,184...6,948,507
Ensembl chr14:6,944,935...6,948,580 		JBrowse link
G ERN1 endoplasmic reticulum to nucleus signaling 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:14,881,913...14,963,290
Ensembl chr12:14,881,923...14,963,284 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,620,698...5,797,095
Ensembl chr11:5,621,212...5,795,264 		JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,076,008...78,115,137
Ensembl chr 2:78,076,080...78,115,126 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:23269647 RGD:7205435 NCBI chr15:117,658,158...117,737,145
Ensembl chr15:117,658,099...117,731,014 		JBrowse link
G GAB1 GRB2 associated binding protein 1 involved_in ISO (MGI:6094554|PMID:17178724) BHF-UCL PMID:17178724 MGI:6094554 NCBI chr 8:84,257,958...84,391,511
Ensembl chr 8:84,257,965...84,391,621 		JBrowse link
G GAS1 growth arrest specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:28,509,168...28,511,554
Ensembl chr10:28,509,261...28,510,301 		JBrowse link
G HSPB1 heat shock protein family B (small) member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,038,074...10,039,441
Ensembl chr 3:10,037,949...10,039,704 		JBrowse link
G ITGB1BP1 integrin subunit beta 1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:126,905,779...126,921,961
Ensembl chr 3:126,905,810...126,922,045 		JBrowse link
G KDR kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336 		JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:61,396,337...61,417,333
Ensembl chr12:61,396,369...61,417,321 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,877...31,862,031 		JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,059 		JBrowse link
G MIR196A-1 microRNA mir-196a-1 involved_in ISO (PMID:22773844) BHF-UCL PMID:22773844 NCBI chr12:24,886,316...24,886,395
Ensembl chr12:24,886,307...24,886,408 		JBrowse link
G MIR196A-2 microRNA mir-196a-2 involved_in ISO (PMID:22773844) BHF-UCL PMID:22773844 NCBI chr 5:19,204,442...19,204,548
Ensembl chr 5:19,204,442...19,204,548 		JBrowse link
G MIR20A microRNA mir-20a involved_in ISO (PMID:22696064) BHF-UCL PMID:22696064 NCBI chr11:60,735,109...60,735,179
Ensembl chr11:60,735,099...60,735,196 		JBrowse link
G MIR23A microRNA mir-23a involved_in ISO (PMID:21536891) BHF-UCL PMID:21536891 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186 		JBrowse link
G MIR27A microRNA mir-27a involved_in ISO (PMID:21536891) BHF-UCL PMID:21536891 NCBI chr 2:65,308,294...65,308,375
Ensembl chr 2:65,308,294...65,308,375 		JBrowse link
G MIR27B microRNA mir-27b involved_in ISO (PMID:21536891)
(PMID:22184411)		 BHF-UCL PMID:21536891 PMID:22184411 NCBI chr10:27,079,963...27,080,042
Ensembl chr10:27,079,954...27,080,056 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G NR4A1 nuclear receptor subfamily 4, group A, member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,403,088...17,407,918
Ensembl chr 5:17,385,390...17,408,511 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
G PRKD1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,527,743...69,872,374
Ensembl chr 7:69,527,811...69,872,863 		JBrowse link
G PRKD2 protein kinase D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,559,066...52,599,174
Ensembl chr 6:52,559,393...52,599,132 		JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,092,204...20,094,426
Ensembl chr12:20,092,196...20,094,469 		JBrowse link
G SEMA6A semaphorin 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:120,560,095...120,687,597
Ensembl chr 2:120,560,099...120,687,106 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:30771456 RGD:151347421 NCBI chr 3:31,879,143...31,883,041
Ensembl chr 3:31,881,225...31,884,967 		JBrowse link
G SPHK1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,114,946...5,122,580
Ensembl chr12:5,114,947...5,120,083 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,159,156 		JBrowse link
G VCAM1 vascular cell adhesion molecule 1 ISO RGD PMID:23226762 RGD:7207782 NCBI chr 4:117,496,914...117,511,211
Ensembl chr 4:117,496,920...117,511,222 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (PMID:23529610) UniProt PMID:23529610 NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,016,526 		JBrowse link
endothelial cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL13 C-X-C motif chemokine ligand 13 involved_in ISO (PMID:11708770) BHF-UCL PMID:11708770 NCBI chr 8:73,071,261...73,077,342 JBrowse link
endothelial cell chemotaxis to vascular endothelial growth factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAB1 GRB2 associated binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:84,257,958...84,391,511
Ensembl chr 8:84,257,965...84,391,621 		JBrowse link
fibroblast growth factor receptor apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16720875) Ensembl
MGI		 PMID:16720875 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16720875) MGI PMID:16720875 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964 		JBrowse link
fibroblast growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCN2 cellular communication network factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9184077) Ensembl
MGI		 PMID:9184077 GO_REF:0000107 NCBI chr 1:31,674,398...31,677,697
Ensembl chr 1:31,674,394...31,677,691 		JBrowse link
G CEP57 centrosomal protein 57 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:27,812,944...27,858,293
Ensembl chr 9:27,812,929...27,859,568 		JBrowse link
G CHRD chordin involved_in ISO (PMID:12397106) MGI PMID:12397106 NCBI chr13:122,266,632...122,277,513
Ensembl chr13:122,266,626...122,277,645 		JBrowse link
G CHURC1 churchill domain containing 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:88,985,019...89,013,119
Ensembl chr 7:88,985,083...89,012,131 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16399079) Ensembl
MGI		 PMID:16399079 GO_REF:0000107 NCBI chr14:50,528,950...50,558,664
Ensembl chr14:50,528,955...50,558,662 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18533146) Ensembl
MGI		 PMID:18533146 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:32980560) MGI PMID:32980560 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:20022960), (PMID:22556407), (PMID:28859094), (PMID:29545125), (PMID:29700203)
(PMID:26295701)
(PMID:22556407)		 Ensembl
MGI		 PMID:20022960 PMID:22556407 PMID:26295701 PMID:28859094 PMID:29545125 More... GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26116661) Ensembl
MGI		 PMID:26116661 GO_REF:0000107 NCBI chr 8:99,141,967...99,312,131
Ensembl chr 8:99,148,496...99,310,519 		JBrowse link
G FGF1 fibroblast growth factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA
ISS		 (PMID:10830168)
(PMID:8663044)
(PMID:18187602)		 MGI
TreeGrafter
GO_Central
Ensembl
UniProt		 PMID:8663044 PMID:10830168 PMID:18187602 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:144,133,846...144,241,345
Ensembl chr 2:144,133,392...144,241,323 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:11923311) Ensembl
GO_Central
MGI		 PMID:11923311 GO_REF:0000033 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGF12 fibroblast growth factor 12 NOT|acts_upstream_of_or_within ISO (PMID:12815063) MGI PMID:12815063 NCBI chr13:129,237,500...129,817,992
Ensembl chr13:129,240,083...129,817,911 		JBrowse link
G FGF14 fibroblast growth factor 14 NOT|acts_upstream_of_or_within ISO (PMID:12815063) MGI PMID:12815063 NCBI chr11:70,251,374...70,861,941
Ensembl chr11:70,251,446...70,422,192 		JBrowse link
G FGF16 fibroblast growth factor 16 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 PMID:10766846 MGI
TreeGrafter
GO_Central		 PMID:10766846 GO_REF:0000033 GO_REF:0000118 RGD:8553993 NCBI chr  X:61,551,487...61,561,807
Ensembl chr  X:61,552,460...61,561,954 		JBrowse link
G FGF17 fibroblast growth factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10381577) Ensembl
MGI		 PMID:10381577 GO_REF:0000107 NCBI chr14:6,310,840...6,315,465
Ensembl chr14:6,309,735...6,315,882 		JBrowse link
G FGF18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15781473) Ensembl
MGI
TreeGrafter		 PMID:15781473 GO_REF:0000107 GO_REF:0000118 NCBI chr16:52,724,867...52,760,246
Ensembl chr16:52,725,356...52,759,791 		JBrowse link
G FGF19 fibroblast growth factor 19 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:10525310)
(PMID:18187602)		 MGI
GO_Central
TreeGrafter
InterPro
Ensembl		 PMID:10525310 PMID:18187602 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:3,583,027...3,586,985
Ensembl chr 2:3,582,828...3,587,752 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:10830168)
(PMID:8663044)
PMID:10766846
(PMID:2161540)		 MGI
TreeGrafter
GO_Central		 PMID:2161540 PMID:8663044 PMID:10766846 PMID:10830168 GO_REF:0000033 GO_REF:0000118 RGD:8553993 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916 		JBrowse link
G FGF20 fibroblast growth factor 20 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 PMID:12704805 MGI
TreeGrafter
GO_Central		 PMID:12704805 GO_REF:0000033 GO_REF:0000118 RGD:8553960 NCBI chr17:4,691,448...4,700,367
Ensembl chr17:4,691,448...4,700,367 		JBrowse link
G FGF21 fibroblast growth factor 21 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:54,082,653...54,084,532
Ensembl chr 6:54,080,739...54,084,601 		JBrowse link
G FGF22 fibroblast growth factor 22 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:77,683,252...77,687,276
Ensembl chr 2:77,683,738...77,687,282 		JBrowse link
G FGF23 fibroblast growth factor 23 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16436388) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:16436388 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:66,028,591...66,038,078
Ensembl chr 5:66,028,776...66,038,740 		JBrowse link
G FGF3 fibroblast growth factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:1376141)
(PMID:8663044)		 Ensembl
MGI
TreeGrafter
GO_Central		 PMID:1376141 PMID:8663044 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:3,489,208...3,496,532
Ensembl chr 2:3,489,009...3,497,533 		JBrowse link
G FGF4 fibroblast growth factor 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:8663044) Ensembl
GO_Central
TreeGrafter
MGI		 PMID:8663044 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:3,527,113...3,529,011
Ensembl chr 2:3,526,914...3,529,874 		JBrowse link
G FGF5 fibroblast growth factor 5 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:8386828)
(PMID:8663044)		 MGI
GO_Central
TreeGrafter
Ensembl		 PMID:8386828 PMID:8663044 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:137,531,806...137,554,512
Ensembl chr 8:137,532,260...137,554,458 		JBrowse link
G FGF6 fibroblast growth factor 6 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:8663044) Ensembl
TreeGrafter
GO_Central
MGI		 PMID:8663044 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:65,975,807...65,990,035
Ensembl chr 5:65,975,838...65,990,029 		JBrowse link
G FGF7 fibroblast growth factor 7 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:8663044) Ensembl
TreeGrafter
GO_Central
MGI		 PMID:8663044 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:122,215,878...122,278,705
Ensembl chr 1:122,215,882...122,277,750 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16245339)
(PMID:10381577), (PMID:9435295)
(PMID:8663044)		 Ensembl
MGI
GO_Central		 PMID:8663044 PMID:9435295 PMID:10381577 PMID:16245339 GO_REF:0000033 GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:15621532)
(PMID:15229180), (PMID:16308329)
(PMID:8663044)		 RGD
MGI
GO_Central
TreeGrafter		 PMID:8663044 PMID:15229180 PMID:15231666 PMID:15621532 PMID:16308329 GO_REF:0000033 GO_REF:0000118 RGD:1304345 NCBI chr11:1,554,648...1,581,938
Ensembl chr11:1,554,763...1,582,408 		JBrowse link
G FGFBP1 fibroblast growth factor binding protein 1 acts_upstream_of ISO (PMID:15806171) MGI PMID:15806171 NCBI chr 8:11,186,360...11,189,317
Ensembl chr 8:11,186,368...11,189,241 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10830168)
(PMID:15621532)
(PMID:18187602)
(PMID:16778080)
(PMID:2161540)
(PMID:8663044)		 MGI
GOC
Ensembl
InterPro		 PMID:2161540 PMID:8663044 PMID:10830168 PMID:15621532 PMID:16778080 More... GO_REF:0000002 GO_REF:0000107 GO_REF:0000108 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA
ISS		 (PMID:9435295)
(PMID:16778080)
(PMID:15972105), (PMID:17202188)
(PMID:18187602)
(PMID:16989802)
(PMID:15621532)
(PMID:8663044)
(PMID:10830168)		 RGD
MGI
Ensembl
UniProt
InterPro		 PMID:8663044 PMID:9435295 PMID:10830168 PMID:15282342 PMID:15292181 More... GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 RGD:2289848 RGD:6480435 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15781473)
(PMID:18187602)
(PMID:14699054)
(PMID:8663044)		 RGD
MGI
Ensembl
InterPro		 PMID:8663044 PMID:14699054 PMID:15231666 PMID:15781473 PMID:18187602 GO_REF:0000002 GO_REF:0000107 RGD:1304345 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10525310)
(PMID:18187602)
(PMID:8663044)
PMID:10766846		 MGI
InterPro
Ensembl		 PMID:8663044 PMID:10525310 PMID:10766846 PMID:18187602 GO_REF:0000002 GO_REF:0000107 RGD:8553993 NCBI chr 2:80,841,536...80,853,791
Ensembl chr 2:80,841,536...80,853,796 		JBrowse link
G FGFRL1 fibroblast growth factor receptor like 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:365,367...378,384
Ensembl chr 8:365,181...378,375 		JBrowse link
G FLRT1 fibronectin leucine rich transmembrane protein 1 involved_in ISO (MGI:3662950|PMID:16872596), (MGI:5688839|PMID:20421966) UniProt PMID:16872596 PMID:20421966 MGI:3662950 MGI:5688839 NCBI chr 2:7,971,782...8,052,572
Ensembl chr 2:7,976,567...7,991,150 		JBrowse link
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:107,812,354...107,913,006
Ensembl chr 7:107,812,613...107,913,618 		JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:22,940,491...22,955,277
Ensembl chr17:22,940,492...22,954,424 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9660748)
(PMID:11585837)
(PMID:17868091)
(PMID:23136392)
(PMID:15870281)		 MGI
TreeGrafter
Ensembl		 PMID:9660748 PMID:11585837 PMID:15870281 PMID:17868091 PMID:23136392 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:33,725,432...33,852,952
Ensembl chr 5:33,725,444...33,849,953 		JBrowse link
G FRS3 fibroblast growth factor receptor substrate 3 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:9660748) MGI
TreeGrafter
GO_Central
Ensembl		 PMID:9660748 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:36,959,468...36,969,677
Ensembl chr 7:36,959,468...36,969,478 		JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11585837) Ensembl
MGI		 PMID:11585837 GO_REF:0000107 NCBI chr12:5,940,723...6,009,095
Ensembl chr12:5,940,647...6,010,835 		JBrowse link
G IFT80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:30683845) MGI PMID:30683845 NCBI chr13:99,943,203...100,078,148
Ensembl chr13:99,943,208...100,078,148 		JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,020,479...53,129,964
Ensembl chr 7:52,958,106...53,129,958 		JBrowse link
G KIF16B kinesin family member 16B involved_in ISO (MGI:4889011|PMID:21238925) UniProt PMID:21238925 MGI:4889011 NCBI chr17:24,882,139...25,188,990
Ensembl chr17:24,882,142...25,186,703 		JBrowse link
G KL klotho involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:9,427,236...9,479,251
Ensembl chr11:9,427,037...9,479,228 		JBrowse link
G KLB klotho beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18187602) Ensembl
MGI		 PMID:18187602 GO_REF:0000107 NCBI chr 8:30,653,434...30,696,123
Ensembl chr 8:30,653,572...30,691,349 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16020517) Ensembl
MGI		 PMID:16020517 GO_REF:0000107 NCBI chr 2:151,433,925...151,525,909
Ensembl chr 2:151,489,521...151,522,749 		JBrowse link
G NGFR nerve growth factor receptor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10588868) Ensembl
MGI		 PMID:10588868 GO_REF:0000107 NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,356 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of ISO (PMID:18559345) MGI PMID:18559345 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G PRDM14 PR/SET domain 14 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23670199) Ensembl
MGI		 PMID:23670199 GO_REF:0000107 NCBI chr 4:65,273,988...65,295,362
Ensembl chr 4:65,271,315...65,295,178 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,169...39,292,003 		JBrowse link
G RAB14 RAB14, member RAS oncogene family involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:261,228,112...261,256,913
Ensembl chr 1:261,229,535...261,256,791 		JBrowse link
G RHOD ras homolog family member D acts_upstream_of_or_within ISO (PMID:23034183) MGI PMID:23034183 NCBI chr 2:5,392,546...5,404,214
Ensembl chr 2:5,392,547...5,404,339 		JBrowse link
G SETX senataxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:272,093,449...272,170,857
Ensembl chr 1:272,095,358...272,170,747 		JBrowse link
G SHCBP1 SHC binding and spindle associated 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:38,029,869...38,063,773
Ensembl chr 6:38,029,864...38,063,859 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11585837) Ensembl
MGI		 PMID:11585837 GO_REF:0000107 NCBI chr 3:101,209,568...101,366,057
Ensembl chr 3:101,209,641...101,362,723 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15809037) Ensembl
MGI		 PMID:15809037 GO_REF:0000107 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,159,156 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,878,662...36,887,513
Ensembl chr12:36,878,675...36,887,513 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of ISO (PMID:17919533) MGI PMID:17919533 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,412...123,546,417 		JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,762,043...18,835,788
Ensembl chr13:18,761,950...18,831,564 		JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of ISO (PMID:16700629) MGI PMID:16700629 NCBI chr 6:80,110,238...80,138,165 JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18351662) Ensembl
MGI		 PMID:18351662 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G ZNF774 zinc finger protein 774 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:52,985,669...52,994,797
Ensembl chr 7:52,958,106...53,129,958 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in hemopoiesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4887304|PMID:20345253) UniProt PMID:20345253 MGI:4887304 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16720875) Ensembl
MGI
TreeGrafter		 PMID:16720875 GO_REF:0000107 GO_REF:0000118 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:16720875) UniProt
MGI		 PMID:16720875 GO_REF:0000024 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4887304|PMID:20345253) UniProt PMID:20345253 MGI:4887304 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4452541|PMID:20410112) UniProt PMID:20410112 MGI:4452541 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4887304|PMID:20345253) UniProt PMID:20345253 MGI:4887304 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
negative regulation of BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22729085) Ensembl
MGI		 PMID:22729085 GO_REF:0000107 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708 		JBrowse link
G BAMBI BMP and activin membrane bound inhibitor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21743293) ARUK-UCL
Ensembl		 PMID:21743293 GO_REF:0000107 NCBI chr10:40,053,368...40,058,590
Ensembl chr10:40,053,355...40,060,319 		JBrowse link
G BMPER BMP binding endothelial regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12897139) Ensembl
MGI		 PMID:12897139 GO_REF:0000107 NCBI chr18:39,417,830...39,664,010
Ensembl chr18:39,412,838...39,663,592 		JBrowse link
G CAV1 caveolin 1 involved_in ISO (PMID:15657086) BHF-UCL PMID:15657086 NCBI chr18:29,648,120...29,682,451
Ensembl chr18:29,649,992...29,682,465 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9431803), (PMID:9501024) Ensembl
MGI		 PMID:9431803 PMID:9501024 GO_REF:0000107 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G CHRD chordin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15780974), (PMID:19850029) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:15780974 PMID:19850029 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:122,266,632...122,277,513
Ensembl chr13:122,266,626...122,277,645 		JBrowse link
G CHRDL1 chordin like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23676271) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:23676271 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:90,703,422...90,827,216
Ensembl chr  X:90,703,428...90,827,210 		JBrowse link
G CHRDL2 chordin like 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:14660436) GO_Central
MGI		 PMID:14660436 GO_REF:0000033 NCBI chr 9:9,017,691...9,053,527
Ensembl chr 9:9,017,690...9,053,554 		JBrowse link
G CRIM1 cysteine rich transmembrane BMP regulator 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21743293) ARUK-UCL
Ensembl		 PMID:21743293 GO_REF:0000107 NCBI chr 3:103,612,231...103,815,493
Ensembl chr 3:103,612,659...103,815,556 		JBrowse link
G CTDSPL2 CTD small phosphatase like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25100727) Ensembl
MGI		 PMID:25100727 GO_REF:0000107 NCBI chr 1:127,029,445...127,125,747
Ensembl chr 1:127,028,887...127,125,392 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 involved_in ISO (MGI:3055649|PMID:15466485) BHF-UCL PMID:15466485 MGI:3055649 NCBI chr 2:66,068,722...66,073,537 JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:19850029) MGI PMID:19850029 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,288 		JBrowse link
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:78,186,667...78,191,788
Ensembl chr15:78,185,790...78,191,226 		JBrowse link
G FSTL3 follistatin like 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11010968) Ensembl
MGI		 PMID:11010968 GO_REF:0000107 NCBI chr 2:77,656,655...77,662,608
Ensembl chr 2:77,656,663...77,662,613 		JBrowse link
G FZD1 frizzled class receptor 1 acts_upstream_of_or_within ISO (PMID:14627707) MGI PMID:14627707 NCBI chr 9:71,346,994...71,356,488
Ensembl chr 9:71,349,988...71,352,104 		JBrowse link
G GDF3 growth differentiation factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:62,835,926...62,841,827
Ensembl chr 5:62,835,880...62,841,884 		JBrowse link
G GPR155 G protein-coupled receptor 155 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:80,417,247...80,462,091
Ensembl chr15:80,396,976...80,462,018 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17522159) Ensembl
MGI		 PMID:17522159 GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G GREM2 gremlin 2, DAN family BMP antagonist involved_in ISO (MGI:5507937|PMID:23063586) UniProt PMID:23063586 MGI:5507937 NCBI chr10:11,884,198...11,904,249
Ensembl chr10:11,885,280...11,885,780 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G HJV hemojuvelin BMP co-receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20065295) Ensembl
MGI		 PMID:20065295 GO_REF:0000107 NCBI chr 4:99,327,989...99,332,647
Ensembl chr 4:99,328,053...99,332,645 		JBrowse link
G HTRA1 HtrA serine peptidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973287) Ensembl
MGI		 PMID:14973287 GO_REF:0000107 NCBI chr14:132,043,044...132,103,590
Ensembl chr14:132,041,934...132,103,595 		JBrowse link
G HTRA3 HtrA serine peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:2,794,780...2,819,686
Ensembl chr 8:2,793,799...2,820,184 		JBrowse link
G LEMD2 LEM domain nuclear envelope protein 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:29,980,394...29,997,077
Ensembl chr 7:29,980,401...29,997,115 		JBrowse link
G LEMD3 LEM domain containing 3 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:29,596,334...29,672,704
Ensembl chr 5:29,596,334...29,673,875 		JBrowse link
G LRP2 LDL receptor related protein 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:75,565,299...75,754,604
Ensembl chr15:75,565,303...75,716,694 		JBrowse link
G MIR100 microRNA mir-100 acts_upstream_of ISO (PMID:22684006) BHF-UCL PMID:22684006 NCBI chr 9:49,157,909...49,157,988
Ensembl chr 9:49,157,909...49,157,988 		JBrowse link
G MIR125B-1 microRNA mir-125b-1 acts_upstream_of ISO (PMID:28214897) BHF-UCL PMID:28214897 NCBI chr 9:49,109,435...49,109,514
Ensembl chr 9:49,109,435...49,109,514 		JBrowse link
G MIR195 microRNA mir-195 involved_in ISO (PMID:31921616) BHF-UCL PMID:31921616 NCBI chr12:52,422,039...52,422,118
Ensembl chr12:52,422,039...52,422,118 		JBrowse link
G MIR199A-1 microRNA mir-199a-1 involved_in ISO (PMID:22821565) BHF-UCL PMID:22821565 NCBI chr 9:114,533,783...114,533,858
Ensembl chr 9:114,533,777...114,533,880 		JBrowse link
G MIR199A-2 microRNA mir-199a-2 involved_in ISO (PMID:22821565) BHF-UCL PMID:22821565 NCBI chr 2:69,558,051...69,558,130
Ensembl chr 2:69,558,050...69,558,131 		JBrowse link
G MIR199B microRNA mir-199b involved_in ISO (PMID:32082362) BHF-UCL PMID:32082362 NCBI chr 1:268,691,520...268,691,593
Ensembl chr 1:268,691,502...268,691,610 		JBrowse link
G MIR20A microRNA mir-20a involved_in ISO (PMID:22450430) BHF-UCL PMID:22450430 NCBI chr11:60,735,109...60,735,179
Ensembl chr11:60,735,099...60,735,196 		JBrowse link
G MIR214 microRNA mir-214 acts_upstream_of ISO (PMID:30703347) BHF-UCL PMID:30703347 NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101 		JBrowse link
G MIR26A microRNA mir-26a involved_in ISO (PMID:24047927) BHF-UCL PMID:24047927 NCBI chr 5:23,112,744...23,112,827
Ensembl chr 5:23,112,744...23,112,827 		JBrowse link
G MIR885 microRNA mir-885 acts_upstream_of ISO (PMID:24882581) BHF-UCL PMID:24882581 NCBI chr13:66,597,531...66,597,610
Ensembl chr13:66,597,531...66,597,610 		JBrowse link
G MIR98 microRNA mir-98 acts_upstream_of ISO (PMID:27860183) BHF-UCL PMID:27860183 NCBI chr  X:46,302,381...46,302,460
Ensembl chr  X:46,302,381...46,302,460 		JBrowse link
G MTMR4 myotubularin related protein 4 involved_in ISO (PMID:23150675) FlyBase PMID:23150675 NCBI chr12:34,745,232...34,771,315
Ensembl chr12:34,745,236...34,771,167 		JBrowse link
G NANOG Nanog homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16801560) Ensembl
MGI		 PMID:16801560 GO_REF:0000107 NCBI chr 5:62,931,642...62,939,086
Ensembl chr 5:62,932,382...62,939,082 		JBrowse link
G NBL1 NBL1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr 6:78,046,084...78,071,609
Ensembl chr 6:78,059,392...78,071,604 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:19852960)
(PMID:15110716), (PMID:15975920), (PMID:18462699), (PMID:19850029)
(PMID:16712836)		 Ensembl
MGI
TreeGrafter
GO_Central
UniProt
InterPro		 PMID:15110716 PMID:15975920 PMID:16712836 PMID:18462699 PMID:19850029 More... GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G PPARG peroxisome proliferator activated receptor gamma acts_upstream_of_or_within ISO (PMID:21743293) ARUK-UCL PMID:21743293 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944 		JBrowse link
G PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25100727) Ensembl
MGI		 PMID:25100727 GO_REF:0000107 NCBI chr 1:189,248,974...189,296,147
Ensembl chr 1:189,207,577...189,291,345 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921 		JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21937600) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:21937600 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G SKIL SKI like proto-oncogene involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:109,029,831...109,059,176
Ensembl chr13:109,029,952...109,059,173 		JBrowse link
G SKOR1 SKI family transcriptional corepressor 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:165,753,522...165,766,227
Ensembl chr 1:165,751,321...165,762,299 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21937600) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:21937600 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:96,795,362...96,842,360
Ensembl chr 1:96,803,098...96,844,492 		JBrowse link
G SMAD6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:164,652,602...164,735,084
Ensembl chr 1:164,656,887...164,735,704 		JBrowse link
G SMAD7 SMAD family member 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chr 1:98,512,800...98,543,924
Ensembl chr 1:98,514,267...98,542,382 		JBrowse link
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:6,037,732...6,142,569
Ensembl chr 3:6,037,741...6,142,575 		JBrowse link
G SMURF2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:14,368,683...14,492,129
Ensembl chr12:14,368,701...14,492,108 		JBrowse link
G SORL1 sortilin related receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,435,350...48,653,670
Ensembl chr 9:48,435,345...48,653,655 		JBrowse link
G SOST sclerostin acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:14633986)
(PMID:17002572)		 MGI
TreeGrafter
GO_Central
Ensembl		 PMID:14633986 PMID:17002572 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:19,354,912...19,360,348
Ensembl chr12:19,355,234...19,360,352 		JBrowse link
G SOSTDC1 sclerostin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16179481)
(PMID:14623234), (PMID:16179481)		 Ensembl
MGI
TreeGrafter		 PMID:14623234 PMID:16179481 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:85,743,332...85,747,893
Ensembl chr 9:85,743,341...85,747,591 		JBrowse link
G SPART spartin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22619377) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:22619377 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:12,313,211...12,346,226
Ensembl chr11:12,313,210...12,374,645 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:17919533) MGI PMID:17919533 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,412...123,546,417 		JBrowse link
G TMEM53 transmembrane protein 53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:166,645,103...166,664,382
Ensembl chr 6:166,645,098...166,680,654 		JBrowse link
G TMPRSS6 transmembrane serine protease 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19751239) Ensembl
MGI		 PMID:19751239 GO_REF:0000107 NCBI chr 5:10,663,491...10,704,583
Ensembl chr 5:10,663,635...10,705,471 		JBrowse link
G TNFAIP6 TNF alpha induced protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:862,013...881,352
Ensembl chr15:862,015...881,461 		JBrowse link
G TOB1 transducer of ERBB2, 1 acts_upstream_of_or_within ISO (PMID:11163184) MGI PMID:11163184 NCBI chr12:27,116,579...27,119,906
Ensembl chr12:27,116,584...27,117,614 		JBrowse link
G TRIM33 tripartite motif containing 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:106,058,197...106,195,145
Ensembl chr 4:106,058,109...106,191,800 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15780974)
(PMID:12665593)		 Ensembl
MGI		 PMID:12665593 PMID:15780974 GO_REF:0000107 NCBI chr 6:98,629,116...98,678,322
Ensembl chr 6:98,625,505...98,678,258 		JBrowse link
G VWC2 von Willebrand factor C domain containing 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:135,982,814...136,083,069
Ensembl chr 9:135,982,227...136,083,616 		JBrowse link
G VWC2L von Willebrand factor C domain containing 2 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19852960) Ensembl
MGI
TreeGrafter		 PMID:19852960 GO_REF:0000107 GO_REF:0000118 NCBI chr15:116,764,621...116,916,993
Ensembl chr15:116,761,633...116,915,365 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,786...15,014,998 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18351662) Ensembl
MGI		 PMID:18351662 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
negative regulation of cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR15A microRNA mir-15a involved_in ISO (PMID:23233752) BHF-UCL PMID:23233752 NCBI chr11:17,757,463...17,757,541
Ensembl chr11:17,757,460...17,757,554 		JBrowse link
G MIR16-1 microRNA mir-16-1 involved_in ISO (PMID:23233752) BHF-UCL PMID:23233752 NCBI chr13:100,083,329...100,083,405
Ensembl chr13:100,083,329...100,083,405 		JBrowse link
G MIR16-2 microRNA mir-16-2 involved_in ISO (PMID:23233752) BHF-UCL PMID:23233752 NCBI chr11:17,757,606...17,757,684
Ensembl chr11:17,757,601...17,757,687 		JBrowse link
negative regulation of cellular response to growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASK calcium/calmodulin dependent serine protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:37,166,973...37,535,723
Ensembl chr  X:37,167,577...37,536,160 		JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,758,335...15,149,510 		JBrowse link
negative regulation of cellular response to hepatocyte growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:19,547,003...19,920,780
Ensembl chr16:19,547,011...19,920,513 		JBrowse link
negative regulation of cellular response to transforming growth factor beta stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFLAR CASP8 and FADD like apoptosis regulator ISO RGD PMID:18314484 RGD:11341711 NCBI chr15:104,780,744...104,835,631
Ensembl chr15:104,781,616...104,835,630 		JBrowse link
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:78,186,667...78,191,788
Ensembl chr15:78,185,790...78,191,226 		JBrowse link
G IL4 interleukin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365 		JBrowse link
G MIR145 microRNA mir-145 involved_in ISO (PMID:25323858) BHF-UCL PMID:25323858 NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211 		JBrowse link
G MIR18A microRNA mir-18a involved_in ISO (PMID:28131417) BHF-UCL PMID:28131417 NCBI chr11:60,734,791...60,734,882
Ensembl chr11:60,734,791...60,734,882 		JBrowse link
G MIR19A microRNA mir-19a involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr11:60,734,939...60,735,020
Ensembl chr11:60,734,939...60,735,020 		JBrowse link
G MIR19B-1 microRNA mir-19b-1 involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr11:60,735,238...60,735,317
Ensembl chr11:60,735,230...60,735,328 		JBrowse link
G MIR19B-2 microRNA mir-19b-2 involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:110,113,855...110,113,934
Ensembl chr  X:110,113,855...110,113,934 		JBrowse link
G MIR204 microRNA mir-204 involved_in ISO (PMID:23221074) BHF-UCL PMID:23221074 NCBI chr 1:224,065,494...224,065,602
Ensembl chr 1:224,065,494...224,065,602 		JBrowse link
G MIR29B-1 microRNA mir-29b-1 involved_in ISO (PMID:22269326) BHF-UCL PMID:22269326 NCBI chr18:18,039,629...18,039,709
Ensembl chr18:18,039,629...18,039,709 		JBrowse link
G MIR29B-2 microRNA mir-29b-2 involved_in ISO (PMID:22269326) BHF-UCL PMID:22269326 NCBI chr 9:135,019,079...135,019,162
Ensembl chr 9:135,019,075...135,019,164 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:28467929) ARUK-UCL PMID:28467929 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944 		JBrowse link
negative regulation of cellular response to vascular endothelial growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:19,547,003...19,920,780
Ensembl chr16:19,547,011...19,920,513 		JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663 		JBrowse link
negative regulation of endothelial cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL13 C-X-C motif chemokine ligand 13 involved_in ISO (PMID:11708770) BHF-UCL PMID:11708770 NCBI chr 8:73,071,261...73,077,342 JBrowse link
G MIR16-1 microRNA mir-16-1 involved_in ISO (PMID:21885851) BHF-UCL PMID:21885851 NCBI chr13:100,083,329...100,083,405
Ensembl chr13:100,083,329...100,083,405 		JBrowse link
G MIR16-2 microRNA mir-16-2 involved_in ISO (PMID:21885851) BHF-UCL PMID:21885851 NCBI chr11:17,757,606...17,757,684
Ensembl chr11:17,757,601...17,757,687 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLN apelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:106,236,746...106,246,563
Ensembl chr  X:106,236,749...106,246,377 		JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,186,206...16,220,948
Ensembl chr 2:16,186,206...16,220,940 		JBrowse link
G GPC1 glypican 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:139,457,866...139,483,704
Ensembl chr15:139,457,669...139,484,670 		JBrowse link
G MIR1 microRNA mir-1 involved_in ISO (PMID:23939491) BHF-UCL PMID:23939491 NCBI chr17:61,894,036...61,894,143
Ensembl chr17:61,894,036...61,894,143 		JBrowse link
G MIR16-1 microRNA mir-16-1 involved_in ISO (PMID:21885851) BHF-UCL PMID:21885851 NCBI chr13:100,083,329...100,083,405
Ensembl chr13:100,083,329...100,083,405 		JBrowse link
G MIR16-2 microRNA mir-16-2 involved_in ISO (PMID:21885851) BHF-UCL PMID:21885851 NCBI chr11:17,757,606...17,757,684
Ensembl chr11:17,757,601...17,757,687 		JBrowse link
G NGFR nerve growth factor receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10588868) Ensembl
MGI		 PMID:10588868 GO_REF:0000107 NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,356 		JBrowse link
G PRDM14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23670199) Ensembl
MGI		 PMID:23670199 GO_REF:0000107 NCBI chr 4:65,273,988...65,295,362
Ensembl chr 4:65,271,315...65,295,178 		JBrowse link
G SHISA2 shisa family member 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:17481602) GO_Central
MGI		 PMID:17481602 GO_REF:0000033 NCBI chr11:3,806,297...3,812,170
Ensembl chr11:3,806,302...3,812,170 		JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11585837) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:11585837 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:100,449,476...100,863,780
Ensembl chr 8:100,450,266...100,863,446 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11585837)
(PMID:15809037)		 Ensembl
MGI
TreeGrafter		 PMID:11585837 PMID:15809037 GO_REF:0000107 GO_REF:0000118 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,159,156 		JBrowse link
G SPRY3 sprouty RTK signaling antagonist 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:125,744,643...125,764,342
Ensembl chr  X:125,754,671...125,763,636 		JBrowse link
G SPRY4 sprouty RTK signaling antagonist 4 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:143,877,334...143,891,280
Ensembl chr 2:143,875,355...143,892,292 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:65,595,947...65,778,889
Ensembl chr 4:65,595,951...65,778,884 		JBrowse link
G SULF2 sulfatase 2 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr17:49,663,721...49,805,118
Ensembl chr17:49,663,731...49,804,577 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:17919533) MGI PMID:17919533 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,412...123,546,417 		JBrowse link
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115 		JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within ISO (PMID:16700629) MGI PMID:16700629 NCBI chr 6:80,110,238...80,138,165 JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18351662) Ensembl
MGI		 PMID:18351662 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chr 6:54,823,680...54,830,425
Ensembl chr 6:54,823,668...54,829,506 		JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chr  X:10,361,403...10,415,502 JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,663...63,388,859 		JBrowse link
negative regulation of neurotrophin TRK receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G AGTR2 angiotensin II receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388 		JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F ISO NGF stimulated neurite outgrowth in PC12 cells RGD PMID:10699984 RGD:1642748 NCBI chr 6:167,656,674...167,743,750
Ensembl chr 6:167,657,680...167,743,721 		JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11585837) Ensembl
MGI		 PMID:11585837 GO_REF:0000107 NCBI chr 8:100,449,476...100,863,780
Ensembl chr 8:100,450,266...100,863,446 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11585837) Ensembl
MGI		 PMID:11585837 GO_REF:0000107 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,159,156 		JBrowse link
negative regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:126,795,513...126,853,995
Ensembl chr 3:126,795,426...126,853,995 		JBrowse link
G ADAMTSL2 ADAMTS like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25762570) Ensembl
MGI		 PMID:25762570 GO_REF:0000107 NCBI chr 1:273,119,826...273,155,412
Ensembl chr 1:273,119,904...273,155,409 		JBrowse link
G ASPN asporin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:42,165,553...42,192,902
Ensembl chr 3:42,165,561...42,192,813 		JBrowse link
G BAMBI BMP and activin membrane bound inhibitor involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr10:40,053,368...40,058,590
Ensembl chr10:40,053,355...40,060,319 		JBrowse link
G BCL9L BCL9 like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:46,146,519...46,175,052
Ensembl chr 9:46,146,525...46,174,589 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28467929) ARUK-UCL
Ensembl		 PMID:28467929 GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G CAV2 caveolin 2 acts_upstream_of_or_within ISO (PMID:21832243) MGI PMID:21832243 NCBI chr18:29,699,012...29,707,277
Ensembl chr18:29,699,020...29,707,277 		JBrowse link
G CD109 CD109 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:92,081,675...92,241,079
Ensembl chr 1:92,054,821...92,286,730 		JBrowse link
G CDH3 cadherin 3 involved_in
acts_upstream_of_or_within_negative_effect		 IEA
ISO		 (PMID:22696062) Ensembl
UniProt		 PMID:22696062 GO_REF:0000107 NCBI chr 6:18,190,971...18,236,184
Ensembl chr 6:18,191,664...18,235,862 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G CIDEA cell death inducing DFFA like effector a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:97,253,074...97,268,355
Ensembl chr 6:97,253,074...97,267,405 		JBrowse link
G CILP cartilage intermediate layer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:163,236,864...163,271,222
Ensembl chr 1:163,237,100...163,256,533 		JBrowse link
G CRIPTO cripto, EGF-CFC family member acts_upstream_of_or_within ISO (PMID:17991893) MGI PMID:17991893 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO (PMID:14721776) MGI PMID:14721776 NCBI chr 2:66,068,722...66,073,537 JBrowse link
G DNM2 dynamin 2 ISO RGD PMID:25100282 RGD:9685289 NCBI chr 2:69,474,011...69,574,427
Ensembl chr 2:69,474,031...69,574,424 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429 		JBrowse link
G FAM89B family with sequence similarity 89 member B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:6,680,832...6,682,506
Ensembl chr 2:6,681,490...6,682,511 		JBrowse link
G FKBP1A FKBP prolyl isomerase 1A involved_in ISO (PMID:11583628) FlyBase PMID:11583628 NCBI chr17:33,910,047...33,935,212 JBrowse link
G GDF15 growth differentiation factor 15 involved_in ISO (PMID:25893289) GO_Central PMID:25893289 NCBI chr 2:59,409,035...59,411,356
Ensembl chr 2:59,408,904...59,411,358 		JBrowse link
G GLG1 golgi glycoprotein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20530870) Ensembl
MGI		 PMID:20530870 GO_REF:0000107 NCBI chr 6:13,011,829...13,165,487
Ensembl chr 6:13,011,837...13,164,367 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17991893) Ensembl
MGI		 PMID:17991893 GO_REF:0000107 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,894 		JBrowse link
G HTRA1 HtrA serine peptidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973287) Ensembl
MGI		 PMID:14973287 GO_REF:0000107 NCBI chr14:132,043,044...132,103,590
Ensembl chr14:132,041,934...132,103,595 		JBrowse link
G HTRA3 HtrA serine peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:2,794,780...2,819,686
Ensembl chr 8:2,793,799...2,820,184 		JBrowse link
G IL17RD interleukin 17 receptor D involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,935,631...39,006,721
Ensembl chr13:38,939,316...39,006,690 		JBrowse link
G INTS9 integrator complex subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:12,577,095...12,692,440
Ensembl chr14:12,577,104...12,692,240 		JBrowse link
G LDLRAD4 low density lipoprotein receptor class A domain containing 4 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:96,401,650...96,578,162
Ensembl chr 6:96,401,654...96,577,643 		JBrowse link
G LEMD3 LEM domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:29,596,334...29,672,704
Ensembl chr 5:29,596,334...29,673,875 		JBrowse link
G LOC100520248 EP300-interacting inhibitor of differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,182,580...48,185,328
Ensembl chr 6:48,184,566...48,185,203 		JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISO (MGI:6434720|PMID:31023188) BHF-UCL PMID:31023188 MGI:6434720 NCBI chr 5:22,435,636...22,519,276 JBrowse link
G MECOM MDS1 and EVI1 complex locus NOT|involved_in ISO (PMID:15897867) UniProt PMID:15897867 NCBI chr13:107,753,207...108,336,136
Ensembl chr13:107,754,482...108,335,702 		JBrowse link
G MIR101-1 microRNA mir-101-1 involved_in ISO (PMID:27693460) BHF-UCL PMID:27693460 NCBI chr 1:217,152,783...217,152,873
Ensembl chr 1:217,152,783...217,152,873 		JBrowse link
G MIR101-2 microRNA mir-101-2 involved_in ISO (PMID:27693460) BHF-UCL PMID:27693460 NCBI chr 6:147,330,891...147,330,971
Ensembl chr 6:147,330,890...147,330,972 		JBrowse link
G MIR140 microRNA mir-140 involved_in ISO (PMID:23401231) BHF-UCL PMID:23401231 NCBI chr 6:17,077,530...17,077,599
Ensembl chr 6:17,077,507...17,077,620 		JBrowse link
G MIR142 microRNA mir-142 involved_in ISO (PMID:24558198)
(PMID:26572508)		 BHF-UCL PMID:24558198 PMID:26572508 NCBI chr12:34,609,378...34,609,457
Ensembl chr12:34,609,364...34,609,468 		JBrowse link
G MIR145 microRNA mir-145 involved_in ISO (PMID:25323858) BHF-UCL PMID:25323858 NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211 		JBrowse link
G MIR17 microRNA mir-17 involved_in ISO (PMID:21145484) BHF-UCL PMID:21145484 NCBI chr11:60,734,656...60,734,732
Ensembl chr11:60,734,656...60,734,732 		JBrowse link
G MIR181A-1 microRNA mir-181a-1 involved_in ISO (PMID:22714950) BHF-UCL PMID:22714950 NCBI chr10:21,696,653...21,696,756
Ensembl chr10:21,696,653...21,696,756 		JBrowse link
G MIR181A-2 microRNA mir-181a-2 involved_in ISO (PMID:22714950) BHF-UCL PMID:22714950 NCBI chr 1:265,497,249...265,497,328
Ensembl chr 1:265,497,249...265,497,328 		JBrowse link
G MIR18A microRNA mir-18a involved_in ISO (PMID:21145484)
(PMID:28131417)		 BHF-UCL PMID:21145484 PMID:28131417 NCBI chr11:60,734,791...60,734,882
Ensembl chr11:60,734,791...60,734,882 		JBrowse link
G MIR199A-1 microRNA mir-199a-1 involved_in ISO (PMID:22821565) BHF-UCL PMID:22821565 NCBI chr 9:114,533,783...114,533,858
Ensembl chr 9:114,533,777...114,533,880 		JBrowse link
G MIR199A-2 microRNA mir-199a-2 involved_in ISO (PMID:22821565) BHF-UCL PMID:22821565 NCBI chr 2:69,558,051...69,558,130
Ensembl chr 2:69,558,050...69,558,131 		JBrowse link
G MIR19A microRNA mir-19a involved_in ISO (PMID:29130787)
(PMID:27098600)		 BHF-UCL PMID:27098600 PMID:29130787 NCBI chr11:60,734,939...60,735,020
Ensembl chr11:60,734,939...60,735,020 		JBrowse link
G MIR19B-1 microRNA mir-19b-1 involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr11:60,735,238...60,735,317
Ensembl chr11:60,735,230...60,735,328 		JBrowse link
G MIR19B-2 microRNA mir-19b-2 involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:110,113,855...110,113,934
Ensembl chr  X:110,113,855...110,113,934 		JBrowse link
G MIR204 microRNA mir-204 involved_in ISO (PMID:23221074) BHF-UCL PMID:23221074 NCBI chr 1:224,065,494...224,065,602
Ensembl chr 1:224,065,494...224,065,602 		JBrowse link
G MIR20A microRNA mir-20a involved_in
acts_upstream_of		 ISO (PMID:21145484)
(PMID:31368162)		 BHF-UCL PMID:21145484 PMID:31368162 NCBI chr11:60,735,109...60,735,179
Ensembl chr11:60,735,099...60,735,196 		JBrowse link
G MIR27B microRNA mir-27b involved_in ISO (PMID:28095798) BHF-UCL PMID:28095798 NCBI chr10:27,079,963...27,080,042
Ensembl chr10:27,079,954...27,080,056 		JBrowse link
G MIR29B-1 microRNA mir-29b-1 involved_in ISO (PMID:26687115) BHF-UCL PMID:26687115 NCBI chr18:18,039,629...18,039,709
Ensembl chr18:18,039,629...18,039,709 		JBrowse link
G MIR29B-2 microRNA mir-29b-2 involved_in ISO (PMID:26687115) BHF-UCL PMID:26687115 NCBI chr 9:135,019,079...135,019,162
Ensembl chr 9:135,019,075...135,019,164 		JBrowse link
G MIR342 microRNA mir-342 involved_in ISO (PMID:26857067) BHF-UCL PMID:26857067 NCBI chr 7:121,021,761...121,021,840
Ensembl chr 7:121,021,761...121,021,840 		JBrowse link
G MIR361 microRNA mir-361 involved_in ISO (PMID:31694982) BHF-UCL PMID:31694982 NCBI chr  X:68,924,500...68,924,579
Ensembl chr  X:68,924,500...68,924,579 		JBrowse link
G MIR490-1 microRNA mir-490-1 involved_in ISO (PMID:26714817) BHF-UCL PMID:26714817 NCBI chr18:12,568,196...12,568,274
Ensembl chr18:12,568,196...12,568,276 		JBrowse link
G MIR497 microRNA mir-497 involved_in ISO (PMID:29969696) BHF-UCL PMID:29969696 NCBI chr12:52,422,329...52,422,408
Ensembl chr12:52,422,330...52,422,411 		JBrowse link
G MIR9-1 microRNA mir-9-1 involved_in ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 4:93,660,422...93,660,510 JBrowse link
G MIR9-2 microRNA mir-9-2 involved_in ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 2:96,076,352...96,076,438 JBrowse link
G MIR9-3 microRNA mir-9-3 involved_in ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 7:54,948,452...54,948,532
Ensembl chr 7:54,948,447...54,948,536 		JBrowse link
G MIR98 microRNA mir-98 involved_in ISO (PMID:28251559) BHF-UCL PMID:28251559 NCBI chr  X:46,302,381...46,302,460
Ensembl chr  X:46,302,381...46,302,460 		JBrowse link
G MIRLET7A-1 microRNA let-7a-1 involved_in ISO (PMID:30467960) BHF-UCL PMID:30467960 NCBI chr 9:49,152,586...49,152,665
Ensembl chr 9:49,152,586...49,152,665 		JBrowse link
G MIRLET7A-2 microRNA let-7a-2 involved_in ISO (PMID:30467960) BHF-UCL PMID:30467960 NCBI chr 3:43,465,667...43,465,758
Ensembl chr 3:43,465,667...43,465,758 		JBrowse link
G MIRLET7F-1 microRNA let-7f-1 involved_in ISO (PMID:28345812) BHF-UCL PMID:28345812 NCBI chr  X:46,303,245...46,303,327
Ensembl chr  X:46,303,245...46,303,327 		JBrowse link
G MIRLET7F-2 microRNA let-7f-2 involved_in ISO (PMID:28345812) BHF-UCL PMID:28345812 NCBI chr 3:43,466,034...43,466,130
Ensembl chr 3:43,466,027...43,466,133 		JBrowse link
G MIRLET7G microRNA let-7g involved_in ISO (PMID:24291274) BHF-UCL PMID:24291274 NCBI chr13:34,406,140...34,406,219
Ensembl chr13:34,406,130...34,406,225 		JBrowse link
G NEPN nephrocan involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,204,855...44,230,097 JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575 		JBrowse link
G ONECUT1 one cut homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16103213) Ensembl
MGI		 PMID:16103213 GO_REF:0000107 NCBI chr 1:118,913,400...118,958,140
Ensembl chr 1:118,913,460...118,917,334 		JBrowse link
G ONECUT2 one cut homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16103213) Ensembl
MGI		 PMID:16103213 GO_REF:0000107 NCBI chr 1:106,751,346...106,812,484
Ensembl chr 1:106,751,738...106,799,607 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:26,417,793...26,451,707
Ensembl chr17:26,417,795...26,451,928 		JBrowse link
G PBLD phenazine biosynthesis like protein domain containing involved_in
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:23687415) Ensembl
UniProt		 PMID:23687415 GO_REF:0000107 NCBI chr14:71,442,850...71,487,542
Ensembl chr14:71,440,778...71,487,480 		JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,429,928...39,512,623
Ensembl chr 3:39,432,058...39,512,601 		JBrowse link
G PEG10 paternally expressed 10 involved_in ISO (PMID:15611116) HGNC-UCL PMID:15611116 NCBI chr 9:74,474,121...74,486,983
Ensembl chr 9:74,474,107...74,486,979 		JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,715,898...68,729,471
Ensembl chr 2:68,715,880...68,729,870 		JBrowse link
G PMEPA1 prostate transmembrane protein, androgen induced 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:57,999,287...58,054,329
Ensembl chr17:57,999,287...58,054,118 		JBrowse link
G PPARA peroxisome proliferator activated receptor alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31611175) ARUK-UCL
Ensembl		 PMID:31611175 GO_REF:0000107 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,741...3,364,239 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma acts_upstream_of_or_within
involved_in		 ISO (PMID:28467929)
(PMID:31023188)		 ARUK-UCL
BHF-UCL		 PMID:28467929 PMID:31023188 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944 		JBrowse link
G PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,248,974...189,296,147
Ensembl chr 1:189,207,577...189,291,345 		JBrowse link
G PRDM16 PR/SET domain 16 NOT|involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:14656887)
(PMID:20007998)		 UniProt
MGI
Ensembl		 PMID:14656887 PMID:20007998 GO_REF:0000107 NCBI chr 6:64,704,181...65,012,580
Ensembl chr 6:64,704,920...65,012,570 		JBrowse link
G RASL11B RAS like family 11 member B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15239668) Ensembl
MGI		 PMID:15239668 GO_REF:0000107 NCBI chr 8:39,703,399...39,708,174
Ensembl chr 8:39,703,423...39,708,170 		JBrowse link
G RYR1 ryanodine receptor 1 ISO RGD PMID:32619649 RGD:329845531 NCBI chr 6:47,339,759...47,458,457
Ensembl chr 6:47,343,768...47,458,458 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:15312649)
(PMID:21937600)		 MGI
GO_Central
Ensembl		 PMID:15312649 PMID:21937600 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G SKIL SKI like proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15677329) Ensembl
MGI
GO_Central		 PMID:15677329 GO_REF:0000033 GO_REF:0000107 NCBI chr13:109,029,831...109,059,176
Ensembl chr13:109,029,952...109,059,173 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:21937600) Ensembl
MGI		 PMID:21937600 GO_REF:0000107 NCBI chr 1:96,795,362...96,842,360
Ensembl chr 1:96,803,098...96,844,492 		JBrowse link
G SLC2A10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16550171), (PMID:26376865) ARUK-UCL
Ensembl		 PMID:16550171 PMID:26376865 GO_REF:0000107 NCBI chr17:48,824,054...48,842,811
Ensembl chr17:48,824,414...48,843,201 		JBrowse link
G SMAD6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:164,652,602...164,735,084
Ensembl chr 1:164,656,887...164,735,704 		JBrowse link
G SMAD7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:98,512,800...98,543,924
Ensembl chr 1:98,514,267...98,542,382 		JBrowse link
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:6,037,732...6,142,569
Ensembl chr 3:6,037,741...6,142,575 		JBrowse link
G SMURF2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:14,368,683...14,492,129
Ensembl chr12:14,368,701...14,492,108 		JBrowse link
G SNX1 sorting nexin 1 acts_upstream_of_or_within ISO (PMID:15239668) MGI PMID:15239668 NCBI chr 1:107,903,954...107,949,920
Ensembl chr 1:107,903,741...107,949,923 		JBrowse link
G SNX25 sorting nexin 25 involved_in ISO (MGI:5545984|PMID:21266196)
(PMID:21266196)		 UniProt PMID:21266196 MGI:5545984 NCBI chr15:46,306,967...46,388,404
Ensembl chr15:46,266,762...46,388,324 		JBrowse link
G SNX6 sorting nexin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:65,156,476...65,205,249
Ensembl chr 7:65,156,478...65,205,239 		JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:132,903,103...133,016,725
Ensembl chr 1:132,902,304...133,015,742 		JBrowse link
G SPRED2 sprouty related EVH1 domain containing 2 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chr 3:76,527,646...76,649,652
Ensembl chr 3:76,523,589...76,649,651 		JBrowse link
G SPRED3 sprouty related EVH1 domain containing 3 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chr 6:47,302,211...47,312,034
Ensembl chr 6:47,298,634...47,310,181 		JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:100,449,476...100,863,780
Ensembl chr 8:100,450,266...100,863,446 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,159,156 		JBrowse link
G STRAP serine/threonine kinase receptor associated protein involved_in
acts_upstream_of_or_within
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:9856985)
(PMID:23687415)		 Ensembl
MGI
UniProt		 PMID:9856985 PMID:23687415 GO_REF:0000107 NCBI chr 5:56,717,196...56,736,889
Ensembl chr 5:56,717,207...56,736,862 		JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,092,514...41,095,181
Ensembl chr 3:41,092,449...41,095,136 		JBrowse link
G TGFB3 transforming growth factor beta 3 ISO RGD PMID:12071374 RGD:730235 NCBI chr 7:99,133,873...99,162,239
Ensembl chr 7:99,133,879...99,162,232 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 ISO RGD PMID:10746731 RGD:1579946 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15657445) Ensembl
MGI		 PMID:15657445 GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818 		JBrowse link
G USP15 ubiquitin specific peptidase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,964,380...27,082,549
Ensembl chr 5:26,964,553...27,097,444 		JBrowse link
G VASN vasorin involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:37,961,425...37,972,477
Ensembl chr 3:37,961,432...37,972,114 		JBrowse link
G VEPH1 ventricular zone expressed PH domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:96,986,322...97,366,206
Ensembl chr13:97,075,270...97,366,031 		JBrowse link
G WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,136,200...41,139,986
Ensembl chr 3:41,136,202...41,138,785 		JBrowse link
G WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:27,093,241...27,100,423
Ensembl chr12:27,093,679...27,100,409 		JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16601693) Ensembl
MGI		 PMID:16601693 GO_REF:0000107 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,786...15,014,998 		JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (PMID:26315405) BHF-UCL PMID:26315405 NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,016,526 		JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,678,293...74,699,347
Ensembl chr 2:74,681,193...74,694,869 		JBrowse link
G ZNF451 zinc finger protein 451 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:28,682,284...28,765,489
Ensembl chr 7:28,681,961...28,765,326 		JBrowse link
negative regulation of vascular endothelial growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADM4 cell adhesion molecule 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:50,462,439...50,478,409
Ensembl chr 6:50,462,450...50,478,383 		JBrowse link
G CNMD chondromodulin acts_upstream_of_or_within ISO (PMID:16980969) MGI PMID:16980969 NCBI chr11:25,959,192...25,994,773
Ensembl chr11:25,961,926...25,994,651 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:261,732,280...261,859,833
Ensembl chr 1:261,659,660...261,859,022 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429 		JBrowse link
G EPN2 epsin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,171,916...60,249,539
Ensembl chr12:60,171,920...60,234,278 		JBrowse link
G HGS hepatocyte growth factor-regulated tyrosine kinase substrate involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,207,036...1,219,750
Ensembl chr12:1,207,036...1,219,715 		JBrowse link
G HHEX hematopoietically expressed homeobox involved_in ISO (MGI:3777525|PMID:12588764)
PMID:15016828		 BHF-UCL PMID:12588764 PMID:15016828 MGI:3777525 RGD:8554322 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,219 		JBrowse link
G MMRN2 multimerin 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:87,891,585...87,916,327
Ensembl chr14:87,896,074...87,916,342 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (MGI:4441129|PMID:15060076) UniProt PMID:15060076 MGI:4441129 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,940...116,070,305 		JBrowse link
G PDCD6 programmed cell death 6 involved_in ISO (PMID:21893193) UniProt PMID:21893193 NCBI chr16:79,818,960...79,832,272
Ensembl chr16:79,818,958...79,835,746 		JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:52,017,100...52,086,747
Ensembl chr17:52,017,130...52,086,736 		JBrowse link
negative regulation of vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRA2 adhesion G protein-coupled receptor A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21421844) Ensembl
MGI		 PMID:21421844 GO_REF:0000107 NCBI chr15:48,572,953...48,611,034
Ensembl chr15:48,573,197...48,610,668 		JBrowse link
G CADM4 cell adhesion molecule 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:50,462,439...50,478,409
Ensembl chr 6:50,462,450...50,478,383 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:261,732,280...261,859,833
Ensembl chr 1:261,659,660...261,859,022 		JBrowse link
G DCN decorin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23798385) MGI
Ensembl		 PMID:23798385 GO_REF:0000107 NCBI chr 5:91,678,601...91,713,925
Ensembl chr 5:91,682,658...91,714,235 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429 		JBrowse link
G HRG histidine rich glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:124,505,305...124,516,387
Ensembl chr13:124,505,312...124,516,705 		JBrowse link
G IL12A interleukin 12A acts_upstream_of
involved_in		 ISO
IEA		 (PMID:30106099) ARUK-UCL
Ensembl		 PMID:30106099 GO_REF:0000107 NCBI chr13:99,733,394...99,741,078
Ensembl chr13:99,733,394...99,741,078 		JBrowse link
G IL12B interleukin 12B acts_upstream_of ISO (PMID:30106099) ARUK-UCL PMID:30106099 NCBI chr16:64,143,268...64,158,929
Ensembl chr16:64,143,268...64,158,929 		JBrowse link
G MIR16-1 microRNA mir-16-1 involved_in
acts_upstream_of		 ISO (PMID:21885851)
(PMID:23083510)		 BHF-UCL
ARUK-UCL		 PMID:21885851 PMID:23083510 NCBI chr13:100,083,329...100,083,405
Ensembl chr13:100,083,329...100,083,405 		JBrowse link
G MIR16-2 microRNA mir-16-2 involved_in
acts_upstream_of		 ISO (PMID:21885851)
(PMID:23083510)		 BHF-UCL
ARUK-UCL		 PMID:21885851 PMID:23083510 NCBI chr11:17,757,606...17,757,684
Ensembl chr11:17,757,601...17,757,687 		JBrowse link
G MIR199A-1 microRNA mir-199a-1 acts_upstream_of ISO (PMID:28358369) BHF-UCL PMID:28358369 NCBI chr 9:114,533,783...114,533,858
Ensembl chr 9:114,533,777...114,533,880 		JBrowse link
G MIR199A-2 microRNA mir-199a-2 acts_upstream_of ISO (PMID:28358369) BHF-UCL PMID:28358369 NCBI chr 2:69,558,051...69,558,130
Ensembl chr 2:69,558,050...69,558,131 		JBrowse link
G MIR199B microRNA mir-199b acts_upstream_of ISO (PMID:28358369) BHF-UCL PMID:28358369 NCBI chr 1:268,691,520...268,691,593
Ensembl chr 1:268,691,502...268,691,610 		JBrowse link
G MIR342 microRNA mir-342 involved_in ISO (PMID:26857067) BHF-UCL PMID:26857067 NCBI chr 7:121,021,761...121,021,840
Ensembl chr 7:121,021,761...121,021,840 		JBrowse link
G PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:79,427,033...79,610,840
Ensembl chr13:79,425,835...79,610,840 		JBrowse link
G SEMA6A semaphorin 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:120,560,095...120,687,597
Ensembl chr 2:120,560,099...120,687,106 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,159,156 		JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,987,126...108,053,169 		JBrowse link
nerve growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,624,048...32,679,765 		JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27076424) Ensembl
MGI		 PMID:27076424 GO_REF:0000107 NCBI chr 7:42,218,016...42,332,523
Ensembl chr 7:42,218,290...42,332,518 		JBrowse link
G CORO1A coronin 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24270184) Ensembl
MGI		 PMID:24270184 GO_REF:0000107 NCBI chr 3:18,336,813...18,342,381
Ensembl chr 3:18,336,898...18,342,396 		JBrowse link
G KIDINS220 kinase D interacting substrate 220 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:127,382,587...127,477,753
Ensembl chr 3:127,382,611...127,474,195 		JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 9:100,846,693...102,171,199
Ensembl chr 9:100,847,013...102,170,004 		JBrowse link
G NGF nerve growth factor involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:24270184)
(PMID:7854358)		 TreeGrafter
MGI
GO_Central		 PMID:7854358 PMID:24270184 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:105,256,691...105,307,843
Ensembl chr 4:105,256,749...105,307,837 		JBrowse link
G NTF3 neurotrophin 3 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:65,052,608...65,122,645
Ensembl chr 5:65,052,519...65,123,788 		JBrowse link
G NTF4 neurotrophin 4 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:54,271,244...54,288,846
Ensembl chr 6:54,271,246...54,274,092 		JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:7854358)
(PMID:24270184)		 Ensembl
MGI
GO_Central
TreeGrafter		 PMID:7854358 PMID:24270184 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,255,981 		JBrowse link
G RAP1A RAP1A, member of RAS oncogene family involved_in ISO PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 4:108,675,537...108,750,952
Ensembl chr 4:108,676,685...108,743,368 		JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 involved_in ISO (PMID:17724123) UniProt PMID:17724123 NCBI chr 1:271,494,243...271,624,609
Ensembl chr 1:271,494,248...271,600,920 		JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISO PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 8:48,183,518...48,277,476
Ensembl chr 8:48,021,604...48,277,454 		JBrowse link
G SHOC2 SHOC2 leucine rich repeat scaffold protein ISO RGD PMID:25514808 RGD:155804270 NCBI chr14:121,347,938...121,444,144
Ensembl chr14:121,349,059...121,444,136 		JBrowse link
G SORT1 sortilin 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:110,721,110...110,791,406
Ensembl chr 4:110,720,947...110,789,070 		JBrowse link
neurotrophin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27076424) Ensembl
MGI		 PMID:27076424 GO_REF:0000107 NCBI chr 7:42,218,016...42,332,523
Ensembl chr 7:42,218,290...42,332,518 		JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,255,981 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:191,535,262...191,941,675
Ensembl chr 1:191,535,301...191,925,327 		JBrowse link
neurotrophin TRK receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1S1 AKT1 substrate 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:54,881,581...54,890,917
Ensembl chr 6:54,881,588...54,890,641 		JBrowse link
G BCAR1 BCAR1 scaffold protein, Cas family member involved_in ISO PMID:8631760 UniProt PMID:8631760 RGD:8553306 NCBI chr 6:12,369,332...12,404,822
Ensembl chr 6:12,367,758...12,404,818 		JBrowse link
G CASP3 caspase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23954828) MGI
Ensembl		 PMID:23954828 GO_REF:0000107 NCBI chr15:45,744,320...45,753,252
Ensembl chr15:45,742,751...45,764,213 		JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27076424) Ensembl
MGI		 PMID:27076424 GO_REF:0000107 NCBI chr 7:42,218,016...42,332,523
Ensembl chr 7:42,218,290...42,332,518 		JBrowse link
G DDIT4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr14:75,117,708...75,119,907
Ensembl chr14:75,117,710...75,119,902 		JBrowse link
G HAP1 huntingtin associated protein 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:20,938,463...20,950,053
Ensembl chr12:20,939,554...20,950,051 		JBrowse link
G NDN necdin, MAGE family member acts_upstream_of_or_within ISO (PMID:16049186) MGI PMID:16049186 NCBI chr 1:142,412,688...142,413,665
Ensembl chr 1:142,412,565...142,414,240 		JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,255,981 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12482708) Ensembl
MGI		 PMID:12482708 GO_REF:0000107 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,169...39,292,003 		JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9852579) Ensembl
MGI		 PMID:9852579 GO_REF:0000107 NCBI chr13:68,581,128...68,657,911
Ensembl chr13:68,580,812...68,657,829 		JBrowse link
G SORT1 sortilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:110,721,110...110,791,406
Ensembl chr 4:110,720,947...110,789,070 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 ISO RGD PMID:15728722 RGD:1581104 NCBI chr 3:101,209,568...101,366,057
Ensembl chr 3:101,209,641...101,362,723 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:15546918 RGD:1580675 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
G ZFYVE27 zinc finger FYVE-type containing 27 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:109,088,758...109,119,854
Ensembl chr14:109,088,810...109,113,011 		JBrowse link
positive regulation of BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G ARK2C arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610558) Ensembl
MGI
TreeGrafter		 PMID:23610558 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:95,951,387...96,072,522
Ensembl chr 1:95,950,746...96,066,928 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPER BMP binding endothelial regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:39,417,830...39,664,010
Ensembl chr18:39,412,838...39,663,592 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:130,392,404...130,395,179
Ensembl chr 4:130,392,407...130,395,150 		JBrowse link
G CDH5 cadherin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:27,108,560...27,142,145
Ensembl chr 6:27,108,597...27,142,177 		JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:264,277,549...264,301,731
Ensembl chr 1:264,276,987...264,301,713 		JBrowse link
G ELAPOR2 endosome-lysosome associated apoptosis and autophagy regulator family member 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:93,540,846...93,724,739
Ensembl chr 9:93,540,277...93,723,880 		JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G FBXL15 F-box and leucine rich repeat protein 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:113,430,169...113,434,345
Ensembl chr14:113,430,401...113,434,347 		JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18590716) Ensembl
MGI		 PMID:18590716 GO_REF:0000107 NCBI chr 2:59,256,546...59,267,171
Ensembl chr 2:59,253,342...59,267,165 		JBrowse link
G FOXD1 forkhead box D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248 		JBrowse link
G GATA4 GATA binding protein 4 involved_in ISO PMID:12606287 BHF-UCL PMID:12606287 RGD:8554170 NCBI chr14:14,858,470...14,938,156
Ensembl chr14:14,884,662...14,939,941 		JBrowse link
G GATA6 GATA binding protein 6 involved_in ISO PMID:12606287 BHF-UCL PMID:12606287 RGD:8554170 NCBI chr 6:107,282,709...107,314,725
Ensembl chr 6:107,282,849...107,314,626 		JBrowse link
G GDF2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,506,083...88,513,416
Ensembl chr14:88,507,399...88,513,375 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15925496) Ensembl
MGI		 PMID:15925496 GO_REF:0000107 NCBI chr  X:109,536,495...109,973,605
Ensembl chr  X:109,536,504...109,973,607 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18579678) Ensembl
MGI		 PMID:18579678 GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO (PMID:18579678) MGI PMID:18579678 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881 		JBrowse link
G ILK integrin linked kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:3,145,647...3,152,097
Ensembl chr 9:3,145,608...3,159,858 		JBrowse link
G KCP kielin cysteine rich BMP regulator involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15793581) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:15793581 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:19,689,111...19,741,641
Ensembl chr18:19,711,112...19,741,637 		JBrowse link
G KDR kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336 		JBrowse link
G MIR140 microRNA mir-140 involved_in ISO (PMID:27214554) BHF-UCL PMID:27214554 NCBI chr 6:17,077,530...17,077,599
Ensembl chr 6:17,077,507...17,077,620 		JBrowse link
G MIR20A microRNA mir-20a involved_in ISO (PMID:21743293) ARUK-UCL PMID:21743293 NCBI chr11:60,735,109...60,735,179
Ensembl chr11:60,735,099...60,735,196 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18667074) Ensembl
MGI		 PMID:18667074 GO_REF:0000107 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:18667074) MGI PMID:18667074 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NEO1 neogenin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20065295) Ensembl
MGI		 PMID:20065295 GO_REF:0000107 NCBI chr 7:60,064,984...60,299,892
Ensembl chr 7:60,064,994...60,300,562 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,981,636...101,150,195 		JBrowse link
G NUMA1 nuclear mitotic apparatus protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:6,591,943...6,662,966
Ensembl chr 9:6,591,945...6,662,085 		JBrowse link
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24835669) Ensembl
MGI		 PMID:24835669 GO_REF:0000107 NCBI chr16:32,130,254...32,146,114
Ensembl chr16:32,142,034...32,148,287 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:19,933,035...20,166,746
Ensembl chr 8:19,922,779...20,166,754 		JBrowse link
G SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,113,596...31,153,095
Ensembl chr 7:31,114,082...31,150,000 		JBrowse link
G SMAD2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:65,595,947...65,778,889
Ensembl chr 4:65,595,951...65,778,884 		JBrowse link
G TBX20 T-box transcription factor 20 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:5299248|PMID:21983003) BHF-UCL
Ensembl		 PMID:21983003 GO_REF:0000107 MGI:5299248 NCBI chr18:38,635,603...38,681,690
Ensembl chr18:38,635,617...38,678,133 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:25382630) MGI PMID:25382630 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12665593) Ensembl
MGI		 PMID:12665593 GO_REF:0000107 NCBI chr 6:98,629,116...98,678,322
Ensembl chr 6:98,625,505...98,678,258 		JBrowse link
G UBE2O ubiquitin conjugating enzyme E2 O involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,055,091...5,114,127
Ensembl chr12:5,055,065...5,114,123 		JBrowse link
G VSIR V-set immunoregulatory receptor acts_upstream_of_or_within ISO (PMID:20042595) MGI PMID:20042595 NCBI chr14:74,667,081...74,693,347
Ensembl chr14:74,666,624...74,693,281 		JBrowse link
G ZNF423 zinc finger protein 423 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,929,286...35,299,695
Ensembl chr 6:34,932,597...35,299,688 		JBrowse link
positive regulation of cell migration by vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYO1C myosin IC involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,691,252...47,715,670
Ensembl chr12:47,691,256...47,718,337 		JBrowse link
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:70,026,254...70,086,950
Ensembl chr 6:70,026,373...70,084,742 		JBrowse link
positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPB1 heat shock protein family B (small) member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,038,074...10,039,441
Ensembl chr 3:10,037,949...10,039,704 		JBrowse link
G KDR kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336 		JBrowse link
G PRKD1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,527,743...69,872,374
Ensembl chr 7:69,527,811...69,872,863 		JBrowse link
G PRKD2 protein kinase D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,559,066...52,599,174
Ensembl chr 6:52,559,393...52,599,132 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
positive regulation of endothelial cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF16 fibroblast growth factor 16 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:61,551,487...61,561,807
Ensembl chr  X:61,552,460...61,561,954 		JBrowse link
G FGF18 fibroblast growth factor 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:52,724,867...52,760,246
Ensembl chr16:52,725,356...52,759,791 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:16756958) UniProt PMID:16756958 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
positive regulation of fibroblast growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18231602), (PMID:18533146) Ensembl
MGI		 PMID:18231602 PMID:18533146 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DSTYK dual serine/threonine and tyrosine protein kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:65,833,050...65,892,024
Ensembl chr 9:65,833,054...65,891,999 		JBrowse link
G FGFBP1 fibroblast growth factor binding protein 1 acts_upstream_of_or_within ISO (PMID:15806171) MGI PMID:15806171 NCBI chr 8:11,186,360...11,189,317
Ensembl chr 8:11,186,368...11,189,241 		JBrowse link
G FGFBP3 fibroblast growth factor binding protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18669637) MGI
Ensembl		 PMID:18669637 GO_REF:0000107 NCBI chr14:103,515,787...103,518,055
Ensembl chr14:103,515,795...103,517,641 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326 		JBrowse link
G NPTN neuroplastin involved_in ISO PMID:19952283 UniProt PMID:19952283 RGD:2325174 NCBI chr 7:59,768,414...59,840,594
Ensembl chr 7:59,714,080...59,840,591 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:22750515) ARUK-UCL PMID:22750515 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:18559345) MGI PMID:18559345 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G PRKD2 protein kinase D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,559,066...52,599,174
Ensembl chr 6:52,559,393...52,599,132 		JBrowse link
G SMOC2 SPARC related modular calcium binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:1,193,163...1,332,739
Ensembl chr 1:1,193,167...1,332,694 		JBrowse link
positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF21 fibroblast growth factor 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18187602) Ensembl
MGI		 PMID:18187602 GO_REF:0000107 NCBI chr 6:54,082,653...54,084,532
Ensembl chr 6:54,080,739...54,084,601 		JBrowse link
G FGF23 fibroblast growth factor 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16436388) Ensembl
MGI		 PMID:16436388 GO_REF:0000107 NCBI chr 5:66,028,591...66,038,078
Ensembl chr 5:66,028,776...66,038,740 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18187602) Ensembl
MGI		 PMID:18187602 GO_REF:0000107 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:18187602) MGI PMID:18187602 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964 		JBrowse link
G KL klotho involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16436388) Ensembl
MGI		 PMID:16436388 GO_REF:0000107 NCBI chr11:9,427,236...9,479,251
Ensembl chr11:9,427,037...9,479,228 		JBrowse link
G KLB klotho beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18187602) Ensembl
MGI		 PMID:18187602 GO_REF:0000107 NCBI chr 8:30,653,434...30,696,123
Ensembl chr 8:30,653,572...30,691,349 		JBrowse link
positive regulation of neurotrophin TRK receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYFIP1 cytoplasmic FMR1 interacting protein 1 involved_in ISO (MGI:5825407|PMID:27605705) UniProt PMID:27605705 MGI:5825407 NCBI chr15:32,064,431...32,175,095
Ensembl chr15:32,064,475...32,175,094 		JBrowse link
G CYFIP2 cytoplasmic FMR1 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:65,852,584...66,001,576
Ensembl chr16:65,852,588...66,001,559 		JBrowse link
G NGF nerve growth factor acts_upstream_of_or_within ISO PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chr 4:105,256,691...105,307,843
Ensembl chr 4:105,256,749...105,307,837 		JBrowse link
G PPP2R5B protein phosphatase 2 regulatory subunit B'beta acts_upstream_of_or_within ISO PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chr 2:7,248,141...7,256,796
Ensembl chr 2:7,248,151...7,256,427 		JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 ISO RGD PMID:18768694 RGD:13504749 NCBI chr 4:129,361,596...129,395,790
Ensembl chr 4:129,357,552...129,395,583 		JBrowse link
G TMEM108 transmembrane protein 108 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:74,524,122...74,556,327
Ensembl chr13:74,180,198...74,555,928 		JBrowse link
G WASF1 WASP family member 1 involved_in ISO (MGI:5825407|PMID:27605705) UniProt PMID:27605705 MGI:5825407 NCBI chr 1:76,107,595...76,180,335 JBrowse link
positive regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADISSP adipose secreted signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:31,943,018...31,956,754
Ensembl chr17:31,950,169...31,956,750 		JBrowse link
G AXIN1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16601693) Ensembl
MGI		 PMID:16601693 GO_REF:0000107 NCBI chr 3:41,344,908...41,393,999
Ensembl chr 3:41,337,071...41,393,997 		JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:2,019,391...2,022,092
Ensembl chr 2:2,019,830...2,021,853 		JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:200,666,250...200,770,880
Ensembl chr 1:200,761,004...200,766,056 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G CREBBP CREB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,388,366...38,530,243
Ensembl chr 3:38,388,547...38,530,224 		JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760 		JBrowse link
G FERMT1 FERM domain containing kindlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,080,585...15,137,947
Ensembl chr17:15,080,587...15,137,753 		JBrowse link
G FLCN folliculin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21258407) Ensembl
MGI
TreeGrafter		 PMID:21258407 GO_REF:0000107 GO_REF:0000118 NCBI chr12:61,029,186...61,045,400
Ensembl chr12:61,031,157...61,045,392 		JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme ISO RGD PMID:15194465 RGD:1582619 NCBI chr 7:53,455,634...53,472,791
Ensembl chr 7:53,460,017...53,472,787 		JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,780,447...64,794,922
Ensembl chr 2:64,780,442...64,794,919 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:26880260 RGD:13504840 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:39,237,299...39,250,479
Ensembl chr 7:39,244,458...39,250,481 		JBrowse link
G ING2 inhibitor of growth family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:44,917,595...44,925,900
Ensembl chr15:44,918,066...44,925,867 		JBrowse link
G ITGA8 integrin subunit alpha 8 acts_upstream_of_or_within ISO (PMID:17537792) MGI PMID:17537792 NCBI chr10:46,132,887...46,303,659
Ensembl chr10:46,132,913...46,303,343 		JBrowse link
G LRG1 leucine rich alpha-2-glycoprotein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:23868260), (PMID:32887674) BHF-UCL
MGI		 PMID:23868260 PMID:32887674 NCBI chr 2:74,300,598...74,303,117
Ensembl chr 2:74,300,619...74,314,315 		JBrowse link
G MEN1 menin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,358,130...7,364,952
Ensembl chr 2:7,358,218...7,364,952 		JBrowse link
G MIR21 microRNA mir-21 acts_upstream_of ISO (PMID:31611175) ARUK-UCL PMID:31611175 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G MIR30B microRNA mir-30b involved_in ISO (PMID:28977001) BHF-UCL PMID:28977001 NCBI chr 4:6,952,794...6,952,869
Ensembl chr 4:6,952,794...6,952,869 		JBrowse link
G MYOCD myocardin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:56,931,628...57,029,258
Ensembl chr12:56,931,317...57,029,258 		JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17537792) Ensembl
MGI		 PMID:17537792 GO_REF:0000107 NCBI chr 8:115,768,963...115,861,170
Ensembl chr 8:115,779,840...115,861,137 		JBrowse link
G RNF111 ring finger protein 111 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16601693) Ensembl
MGI
GO_Central		 PMID:16601693 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:112,961,466...113,059,606
Ensembl chr 1:112,961,468...113,059,600 		JBrowse link
G SDCBP syndecan binding protein involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:74,295,941...74,357,720
Ensembl chr 4:74,295,922...74,341,085 		JBrowse link
G SLC2A10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26376865) ARUK-UCL
Ensembl		 PMID:26376865 GO_REF:0000107 NCBI chr17:48,824,054...48,842,811
Ensembl chr17:48,824,414...48,843,201 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G SNW1 SNW domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:100,718,298...100,749,414
Ensembl chr 7:100,718,036...100,749,356 		JBrowse link
G STK11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,229,888...77,249,322
Ensembl chr 2:77,230,372...77,249,327 		JBrowse link
G TGFB1I1 transforming growth factor beta 1 induced transcript 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,093,275...17,099,204
Ensembl chr 3:17,090,116...17,099,020 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:25382630) RGD
MGI		 PMID:8106553 PMID:25382630 RGD:1579949 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796 		JBrowse link
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115 		JBrowse link
G TSC22D1 TSC22 domain family member 1 involved_in ISO (PMID:21791611) UniProt PMID:21791611 NCBI chr11:22,518,792...22,634,411
Ensembl chr11:22,518,795...22,634,407 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:98,629,116...98,678,322
Ensembl chr 6:98,625,505...98,678,258 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in ISO (PMID:30592286) DIBU PMID:30592286 NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655 		JBrowse link
positive regulation of vascular endothelial growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17560563) Ensembl
MGI		 PMID:17560563 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGF18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17014841) Ensembl
MGI		 PMID:17014841 GO_REF:0000107 NCBI chr16:52,724,867...52,760,246
Ensembl chr16:52,725,356...52,759,791 		JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within ISO (PMID:17544391) MGI PMID:17544391 NCBI chr11:1,554,648...1,581,938
Ensembl chr11:1,554,763...1,582,408 		JBrowse link
G GRB10 growth factor receptor bound protein 10 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:136,580,363...136,742,552
Ensembl chr 9:136,580,362...136,741,756 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11691837) Ensembl
MGI		 PMID:11691837 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G MIR10A microRNA mir-10a involved_in ISO (PMID:22955733) BHF-UCL PMID:22955733 NCBI chr12:24,833,644...24,833,723
Ensembl chr12:24,833,627...24,833,730 		JBrowse link
G MIR10B microRNA mir-10b involved_in ISO (PMID:22955733) BHF-UCL PMID:22955733 NCBI chr15:81,951,644...81,951,723
Ensembl chr15:81,951,636...81,951,736 		JBrowse link
G MIR1224 microRNA mir-1224 involved_in ISO (PMID:28717225) BHF-UCL PMID:28717225 NCBI chr13:122,141,042...122,141,149
Ensembl chr13:122,141,042...122,141,149 		JBrowse link
G MT3 metallothionein 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:18,634,735...18,636,134
Ensembl chr 6:18,634,261...18,636,131 		JBrowse link
G PRKCB protein kinase C beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:21,995,227...22,383,628
Ensembl chr 3:21,995,231...22,383,264 		JBrowse link
G PRKD2 protein kinase D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,559,066...52,599,174
Ensembl chr 6:52,559,393...52,599,132 		JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:175,348,223...176,479,482
Ensembl chr13:175,348,410...176,479,481 		JBrowse link
G VEGFB vascular endothelial growth factor B involved_in ISO (PMID:18259607) UniProt PMID:18259607 NCBI chr 2:7,872,873...7,876,149
Ensembl chr 2:7,872,870...7,876,118 		JBrowse link
positive regulation of vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,675,067...68,948,537
Ensembl chr 8:68,675,070...68,948,414 		JBrowse link
G CCBE1 collagen and calcium binding EGF domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:161,320,627...161,556,539
Ensembl chr 1:161,321,273...161,556,537 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326 		JBrowse link
G JCAD junctional cadherin 5 associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:40,910,563...40,996,336
Ensembl chr10:40,910,548...40,997,071 		JBrowse link
G MIR21 microRNA mir-21 acts_upstream_of ISO (PMID:30106099) ARUK-UCL PMID:30106099 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G MYO1C myosin IC involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,691,252...47,715,670
Ensembl chr12:47,691,256...47,718,337 		JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:175,348,223...176,479,482
Ensembl chr13:175,348,410...176,479,481 		JBrowse link
G SMOC2 SPARC related modular calcium binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:1,193,163...1,332,739
Ensembl chr 1:1,193,167...1,332,694 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
regulation of BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18590716) Ensembl
MGI		 PMID:18590716 GO_REF:0000107 NCBI chr 2:59,256,546...59,267,171
Ensembl chr 2:59,253,342...59,267,165 		JBrowse link
G FST follistatin involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:32,806,341...32,811,382
Ensembl chr16:32,805,932...32,811,421 		JBrowse link
G FSTL1 follistatin like 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:139,847,246...139,901,972
Ensembl chr13:139,847,438...139,901,965 		JBrowse link
G FSTL3 follistatin like 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:77,656,655...77,662,608
Ensembl chr 2:77,656,663...77,662,613 		JBrowse link
G FSTL4 follistatin like 4 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:135,486,885...136,096,939
Ensembl chr 2:135,488,563...136,096,787 		JBrowse link
G FSTL5 follistatin like 5 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:50,264,272...51,052,933
Ensembl chr 8:50,264,275...51,052,864 		JBrowse link
G HOXA13 homeobox A13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12783783) Ensembl
MGI		 PMID:12783783 GO_REF:0000107 NCBI chr18:45,373,340...45,379,046
Ensembl chr18:45,373,440...45,376,325 		JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,234,769...26,269,327
Ensembl chr12:26,235,258...26,269,324 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17359964) Ensembl
MGI		 PMID:17359964 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,718,845...54,730,411
Ensembl chr 6:54,714,157...54,732,574 		JBrowse link
G RGMA repulsive guidance molecule BMP co-receptor a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17472960) Ensembl
MGI		 PMID:17472960 GO_REF:0000107 NCBI chr 7:85,921,524...85,968,887
Ensembl chr 7:85,921,594...85,968,888 		JBrowse link
G SFRP4 secreted frizzled related protein 4 involved_in ISO (MGI:5790095|PMID:27355534) UniProt PMID:27355534 MGI:5790095 NCBI chr 9:108,404,314...108,414,335
Ensembl chr 9:108,404,040...108,414,307 		JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:44,745,653...44,774,563
Ensembl chr 7:44,745,827...44,770,606 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:98,629,116...98,678,322
Ensembl chr 6:98,625,505...98,678,258 		JBrowse link
regulation of cellular response to growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMD dystrophin involved_in ISO (PMID:15149856) BHF-UCL PMID:15149856 RGD:8554509 NCBI chr  X:27,028,223...29,650,728
Ensembl chr  X:27,028,231...28,383,840 		JBrowse link
regulation of endothelial cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:144,133,846...144,241,345
Ensembl chr 2:144,133,392...144,241,323 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:16756958) UniProt PMID:16756958 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916 		JBrowse link
G FGF4 fibroblast growth factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,527,113...3,529,011
Ensembl chr 2:3,526,914...3,529,874 		JBrowse link
regulation of fibroblast growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM20C FAM20C golgi associated secretory pathway kinase acts_upstream_of_or_within ISO (PMID:22615579) MGI PMID:22615579 NCBI chr 3:159,107...200,462
Ensembl chr 3:163,421...200,459 		JBrowse link
G HHIP hedgehog interacting protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12569124) Ensembl
MGI		 PMID:12569124 GO_REF:0000107 NCBI chr 8:83,583,735...83,678,368
Ensembl chr 8:83,583,739...83,679,136 		JBrowse link
G LRIT3 leucine rich repeat, Ig-like and transmembrane domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:112,349,485...112,381,992
Ensembl chr 8:112,360,222...112,376,410 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15136142) Ensembl
MGI		 PMID:15136142 GO_REF:0000107 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:65,595,947...65,778,889
Ensembl chr 4:65,595,951...65,778,884 		JBrowse link
regulation of neurotrophin TRK receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DOK5 docking protein 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23954828) MGI
Ensembl		 PMID:23954828 GO_REF:0000107 NCBI chr17:55,391,074...55,541,561
Ensembl chr17:55,390,802...55,583,858 		JBrowse link
G SLC9A6 solute carrier family 9 member A6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24035762) Ensembl
MGI		 PMID:24035762 GO_REF:0000107 NCBI chr  X:111,176,461...111,233,108
Ensembl chr  X:111,176,495...111,233,099 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:17389358) MGI PMID:17389358 NCBI chr14:23,423,693...23,448,130
Ensembl chr14:23,423,698...23,448,136 		JBrowse link
G ZDHHC17 zinc finger DHHC-type palmitoyltransferase 17 involved_in ISO (MGI:5775247|PMID:26232532) UniProt PMID:26232532 MGI:5775247 NCBI chr 5:104,300,869...104,394,255
Ensembl chr 5:104,300,876...104,394,260 		JBrowse link
regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL9 BCL9 transcription coactivator NOT|involved_in ISO (PMID:19328798) BHF-UCL PMID:19328798 NCBI chr 4:99,970,388...100,058,291
Ensembl chr 4:99,970,394...100,058,164 		JBrowse link
G CAV3 caveolin 3 acts_upstream_of_or_within ISO (PMID:21182936) MGI PMID:21182936 NCBI chr13:65,117,868...65,130,886
Ensembl chr13:65,117,795...65,131,273 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO (PMID:10208746) MGI PMID:10208746 NCBI chr 2:66,068,722...66,073,537 JBrowse link
G ENG endoglin involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:17376778 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2313627 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G FOLR1 folate receptor alpha involved_in ISO (MGI:5644149|PMID:21649587) BHF-UCL PMID:21649587 MGI:5644149 NCBI chr 9:6,753,513...6,760,433
Ensembl chr 9:6,757,040...6,760,402 		JBrowse link
G GDF2 growth differentiation factor 2 NOT|involved_in ISO (MGI:4830635|PMID:20406889) DFLAT PMID:20406889 MGI:4830635 NCBI chr14:88,506,083...88,513,416
Ensembl chr14:88,507,399...88,513,375 		JBrowse link
G IL17F interleukin 17F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:46,058,371...46,066,039
Ensembl chr 7:46,059,002...46,077,048 		JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,234,769...26,269,327
Ensembl chr12:26,235,258...26,269,324 		JBrowse link
G LATS1 large tumor suppressor kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:16,274,955...16,320,980
Ensembl chr 1:16,274,970...16,320,604 		JBrowse link
G LATS2 large tumor suppressor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:1,225,523...1,265,970
Ensembl chr11:1,225,527...1,265,946 		JBrowse link
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25715398) Ensembl
MGI		 PMID:25715398 GO_REF:0000107 NCBI chr 2:125,595,115...125,607,026
Ensembl chr 2:125,591,789...125,607,594 		JBrowse link
G NREP neuronal regeneration related protein involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:14985127) TreeGrafter
MGI
GO_Central		 PMID:14985127 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:117,505,851...117,867,805
Ensembl chr 2:117,838,660...117,867,801 		JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:90,955,524...91,055,923
Ensembl chr 7:90,984,394...91,055,620 		JBrowse link
G SMAD2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11711431) Ensembl
MGI		 PMID:11711431 GO_REF:0000107 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G SMAD7 SMAD family member 7 ISO RGD PMID:11959632 RGD:625758 NCBI chr 1:98,512,800...98,543,924
Ensembl chr 1:98,514,267...98,542,382 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796 		JBrowse link
G TGFBR3L transforming growth factor beta receptor 3 like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:71,294,960...71,298,172
Ensembl chr 2:71,294,968...71,297,927 		JBrowse link
G TRIM33 tripartite motif containing 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:106,058,197...106,195,145
Ensembl chr 4:106,058,109...106,191,800 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16824956) Ensembl
MGI		 PMID:16824956 GO_REF:0000107 NCBI chr10:42,013,114...42,216,139
Ensembl chr10:42,013,084...42,214,205 		JBrowse link
G ZNF703 zinc finger protein 703 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,692,316...48,696,639
Ensembl chr15:48,692,320...48,696,644 		JBrowse link
regulation of vascular endothelial growth factor receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16093361) Ensembl
MGI		 PMID:16093361 GO_REF:0000107 NCBI chr 9:20,714,995...20,721,460
Ensembl chr 9:20,717,344...20,721,460 		JBrowse link
G MYOF myoferlin involved_in ISO (MGI:4821066|PMID:17702744) UniProt PMID:17702744 MGI:4821066 NCBI chr14:104,770,514...104,941,212
Ensembl chr14:104,770,515...104,941,109 		JBrowse link
G NRP1 neuropilin 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
G TMEM204 transmembrane protein 204 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:20439428) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:20439428 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:40,342,957...40,355,887
Ensembl chr 3:40,342,961...40,355,726 		JBrowse link
G VEGFC vascular endothelial growth factor C ISO RGD PMID:11683876 RGD:727326 NCBI chr15:39,037,764...39,136,234
Ensembl chr15:39,039,311...39,132,936 		JBrowse link
G VEGFD vascular endothelial growth factor D ISO RGD PMID:11683876 RGD:727326 NCBI chr  X:11,893,254...11,933,923
Ensembl chr  X:11,893,259...11,933,809 		JBrowse link
regulation of vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD63 CD63 molecule involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:21,172,275...21,176,225
Ensembl chr 5:21,172,283...21,176,232 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G PTP4A3 protein tyrosine phosphatase 4A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24403062) Ensembl
MGI		 PMID:24403062 GO_REF:0000107 NCBI chr 4:2,345,119...2,376,765
Ensembl chr 4:2,345,118...2,364,672 		JBrowse link
G TCF4 transcription factor 4 acts_upstream_of_or_within ISO (PMID:20231428) MGI PMID:20231428 NCBI chr 1:104,718,809...105,079,919
Ensembl chr 1:104,719,151...105,079,919 		JBrowse link
G TSPAN16 tetraspanin 16 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:69,999,179...70,015,489
Ensembl chr 2:69,999,118...70,014,753 		JBrowse link
sequestering of BMP from receptor via BMP binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G GREM2 gremlin 2, DAN family BMP antagonist involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:11,884,198...11,904,249
Ensembl chr10:11,885,280...11,885,780 		JBrowse link
G NBL1 NBL1, DAN family BMP antagonist involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:78,046,084...78,071,609
Ensembl chr 6:78,059,392...78,071,604 		JBrowse link
sequestering of BMP in extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CER1 cerberus 1, DAN family BMP antagonist involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G FBN1 fibrillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:123,102,011...123,359,649
Ensembl chr 1:123,102,009...123,359,649 		JBrowse link
G NBL1 NBL1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:78,046,084...78,071,609
Ensembl chr 6:78,059,392...78,071,604 		JBrowse link
sequestering of TGFbeta in extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBN1 fibrillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:123,102,011...123,359,649
Ensembl chr 1:123,102,009...123,359,649 		JBrowse link
G FBN2 fibrillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:131,150,665...131,370,241
Ensembl chr 2:131,152,127...131,370,881 		JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:106,300,748...106,724,538
Ensembl chr 3:106,300,750...106,724,737 		JBrowse link
G NRROS negative regulator of reactive oxygen species involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,470,641...133,496,218
Ensembl chr13:133,470,645...133,496,223 		JBrowse link
transforming growth factor beta receptor complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1C activin A receptor type 1C ISO TbetaR-II, ActR-II (Chlorocebus aethiops), ligand-dependent RGD PMID:8940033 RGD:631880 NCBI chr15:64,452,632...64,529,329
Ensembl chr15:64,455,989...64,529,107 		JBrowse link
G LOC100520248 EP300-interacting inhibitor of differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,182,580...48,185,328
Ensembl chr 6:48,184,566...48,185,203 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 ISO RGD PMID:8106553 RGD:1579949 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796 		JBrowse link
transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11376112) Ensembl
MGI
TreeGrafter		 PMID:11376112 GO_REF:0000107 GO_REF:0000118 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:14580334) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:14580334 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G ADAM9 ADAM metallopeptidase domain 9 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:47,523,768...47,601,722
Ensembl chr15:47,523,771...47,601,710 		JBrowse link
G AMHR2 anti-Mullerian hormone receptor type 2 acts_upstream_of_or_within ISO PMID:11376112 MGI PMID:11376112 RGD:8554753 NCBI chr 5:18,642,212...18,648,859
Ensembl chr 5:18,642,823...18,648,848 		JBrowse link
G APOA1 apolipoprotein A1 NOT|involved_in ISO (PMID:23726972) UniProt PMID:23726972 NCBI chr 9:44,216,481...44,218,360
Ensembl chr 9:44,216,392...44,218,713 		JBrowse link
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,089,157...39,124,969
Ensembl chr13:39,089,077...39,129,781 		JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:79,356,046...79,412,235
Ensembl chr 5:79,356,067...79,412,235 		JBrowse link
G ARRB2 arrestin beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,161,776...52,170,362
Ensembl chr12:52,161,778...52,170,342 		JBrowse link
G BAMBI BMP and activin membrane bound inhibitor involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:12933693 GO_REF:0000033 GO_REF:0000118 RGD:632261 NCBI chr10:40,053,368...40,058,590
Ensembl chr10:40,053,355...40,060,319 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G CAV2 caveolin 2 acts_upstream_of ISO (PMID:21832243) MGI PMID:21832243 NCBI chr18:29,699,012...29,707,277
Ensembl chr18:29,699,020...29,707,277 		JBrowse link
G CCL2 chemokine (C-C motif) ligand 2 ISO RGD PMID:14505427 RGD:1582324 NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026 		JBrowse link
G CDH5 cadherin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:27,108,560...27,142,145
Ensembl chr 6:27,108,597...27,142,177 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:58,179,084...58,184,778
Ensembl chr  X:58,179,087...58,184,499 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16619037) Ensembl
MGI		 PMID:16619037 GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G CLDN5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:51,161,490...51,162,382
Ensembl chr14:51,161,042...51,163,482 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:74,174,484...74,210,407
Ensembl chr 9:74,173,931...74,210,397 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:16891311 RGD:1625706 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,705,496...110,771,728 		JBrowse link
G DAB2 DAB adaptor protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,590,638...24,776,937
Ensembl chr16:24,590,645...24,646,122 		JBrowse link
G DUSP22 dual specificity phosphatase 22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12138158) Ensembl
MGI		 PMID:12138158 GO_REF:0000107 NCBI chr 7:43,437...96,270
Ensembl chr 7:43,487...96,267 		JBrowse link
G ENG endoglin NOT|involved_in ISO
IEA
IBA
IDA		 (PMID:18223685)
(PMID:8294451)		 BHF-UCL
TreeGrafter
GO_Central
Ensembl
BHF-UCL		 PMID:8294451 PMID:18223685 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO (PMID:28106121) MGI PMID:28106121 NCBI chr 1:182,268,651...182,318,147
Ensembl chr 1:182,265,261...182,318,195 		JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,519,681...182,606,890
Ensembl chr 1:182,519,684...182,606,869 		JBrowse link
G FLCN folliculin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21258407) Ensembl
MGI		 PMID:21258407 GO_REF:0000107 NCBI chr12:61,029,186...61,045,400
Ensembl chr12:61,031,157...61,045,392 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,449,508...98,451,971
Ensembl chr 7:98,449,349...98,455,554 		JBrowse link
G FOXH1 forkhead box H1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:320,610...324,570
Ensembl chr 4:322,838...324,481 		JBrowse link
G FSHB follicle stimulating hormone subunit beta involved_in ISO (PMID:14557487) BHF-UCL PMID:14557487 NCBI chr 2:30,395,769...30,399,282
Ensembl chr 2:30,395,018...30,399,274 		JBrowse link
G FUT8 fucosyltransferase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16236725) Ensembl
MGI		 PMID:16236725 GO_REF:0000107 NCBI chr 7:89,395,637...89,680,502
Ensembl chr 7:89,519,730...89,680,489 		JBrowse link
G GCNT2 glucosaminyl (N-acetyl) transferase 2 (I blood group) involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:7,328,839...7,330,657 JBrowse link
G GLG1 golgi glycoprotein 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20530870) Ensembl
MGI		 PMID:20530870 GO_REF:0000107 NCBI chr 6:13,011,829...13,165,487
Ensembl chr 6:13,011,837...13,164,367 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17159989) Ensembl
MGI		 PMID:17159989 GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G HPGD 15-hydroxyprostaglandin dehydrogenase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:15,718,261...15,773,534
Ensembl chr14:15,718,678...15,760,767 		JBrowse link
G ITGA8 integrin subunit alpha 8 acts_upstream_of ISO (PMID:17537792) MGI PMID:17537792 NCBI chr10:46,132,887...46,303,659
Ensembl chr10:46,132,913...46,303,343 		JBrowse link
G ITGB1 integrin subunit beta 1 NOT|involved_in ISO (PMID:24036928)
(MGI:5582864|PMID:24036928)		 UniProt PMID:24036928 MGI:5582864 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326 		JBrowse link
G ITGB5 integrin subunit beta 5 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:135,468,111...135,587,483
Ensembl chr13:135,467,798...135,587,473 		JBrowse link
G ITGB6 integrin subunit beta 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12634787)
(PMID:30952606)		 Ensembl
MGI		 PMID:12634787 PMID:30952606 GO_REF:0000107 NCBI chr15:67,041,516...67,175,409
Ensembl chr15:67,041,522...67,175,234 		JBrowse link
G ITGB8 integrin subunit beta 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30952606) Ensembl
MGI		 PMID:30952606 GO_REF:0000107 NCBI chr 9:89,342,245...89,450,701
Ensembl chr 9:89,341,162...89,448,665 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:153,686,425...153,687,635
Ensembl chr 6:153,685,682...153,687,636 		JBrowse link
G LGALS9 galectin 9 involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chr12:44,155,079...44,173,634 JBrowse link
G LOC100152566 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:7,382,731...7,422,199
Ensembl chr 7:7,328,214...7,422,197 		JBrowse link
G LOC102157807 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:7,359,427...7,361,729 JBrowse link
G LOC110255306 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:7,327,647...7,329,792 JBrowse link
G LPXN leupaxin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:12,534,780...12,582,756
Ensembl chr 2:12,540,098...12,582,752 		JBrowse link
G LRRC32 leucine rich repeat containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,802,228...10,815,892
Ensembl chr 9:10,802,236...10,815,563 		JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7730318)
(PMID:12379497)		 Ensembl
MGI		 PMID:7730318 PMID:12379497 GO_REF:0000107 NCBI chr 2:6,701,455...6,720,191
Ensembl chr 2:6,701,510...6,720,153 		JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12208849) Ensembl
MGI		 PMID:12208849 GO_REF:0000107 NCBI chr 6:48,831,018...48,861,503
Ensembl chr 6:48,831,014...48,861,507 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (PMID:12941696) MGI PMID:12941696 NCBI chr16:35,872,301...35,947,097
Ensembl chr16:35,872,131...35,946,987 		JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (PMID:16145668) MGI PMID:16145668 NCBI chr 1:58,482,046...58,548,087
Ensembl chr 1:58,481,956...58,548,057 		JBrowse link
G MIR143 microRNA mir-143 acts_upstream_of_or_within ISO (PMID:29925839) MGI PMID:29925839 NCBI chr 2:150,578,738...150,578,817
Ensembl chr 2:150,578,738...150,578,817 		JBrowse link
G MIR145 microRNA mir-145 acts_upstream_of_or_within ISO (PMID:29925839) MGI PMID:29925839 NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211 		JBrowse link
G MIR183 microRNA mir-183 involved_in ISO (PMID:24586048) ARUK-UCL PMID:24586048 NCBI chr18:18,982,269...18,982,338
Ensembl chr18:18,982,269...18,982,338 		JBrowse link
G MIR212 microRNA mir-212 involved_in ISO (PMID:25217442) BHF-UCL PMID:25217442 NCBI chr12:48,163,054...48,163,135
Ensembl chr12:48,163,046...48,163,145 		JBrowse link
G MIR26A microRNA mir-26a involved_in ISO (PMID:20857419) BHF-UCL PMID:20857419 NCBI chr 5:23,112,744...23,112,827
Ensembl chr 5:23,112,744...23,112,827 		JBrowse link
G MIR30A microRNA mir-30a involved_in ISO (PMID:23960241) BHF-UCL PMID:23960241 NCBI chr 1:51,412,827...51,412,933
Ensembl chr 1:51,412,827...51,412,933 		JBrowse link
G MSTN myostatin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12595574) Ensembl
MGI		 PMID:12595574 GO_REF:0000107 NCBI chr15:94,623,526...94,628,440
Ensembl chr15:94,620,270...94,628,545 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29715368) Ensembl
MGI		 PMID:29715368 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G NLK nemo like kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,402,990...44,553,527
Ensembl chr12:44,403,021...44,553,518 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14511481) Ensembl
MGI		 PMID:14511481 GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17537792) Ensembl
MGI		 PMID:17537792 GO_REF:0000107 NCBI chr 8:115,768,963...115,861,170
Ensembl chr 8:115,779,840...115,861,137 		JBrowse link
G NRROS negative regulator of reactive oxygen species involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,470,641...133,496,218
Ensembl chr13:133,470,645...133,496,223 		JBrowse link
G ONECUT1 one cut homeobox 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16103213) Ensembl
MGI		 PMID:16103213 GO_REF:0000107 NCBI chr 1:118,913,400...118,958,140
Ensembl chr 1:118,913,460...118,917,334 		JBrowse link
G ONECUT2 one cut homeobox 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16103213) Ensembl
MGI		 PMID:16103213 GO_REF:0000107 NCBI chr 1:106,751,346...106,812,484
Ensembl chr 1:106,751,738...106,799,607 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO PMID:22073128 BHF-UCL PMID:22073128 RGD:8554355 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196 		JBrowse link
G PIAS2 protein inhibitor of activated STAT 2 NOT|involved_in ISO (PMID:16777850) UniProt PMID:16777850 NCBI chr 1:96,401,635...96,545,798
Ensembl chr 1:96,441,676...96,545,780 		JBrowse link
G PML PML nuclear body scaffold involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15356634) Ensembl
MGI		 PMID:15356634 GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,053...59,450,105 		JBrowse link
G PTK2 protein tyrosine kinase 2 involved_in ISO (PMID:24036928) UniProt PMID:24036928 NCBI chr 4:2,656,606...2,896,060
Ensembl chr 4:2,656,614...2,896,054 		JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:34,693,363...35,258,699
Ensembl chr 1:34,693,368...35,258,699 		JBrowse link
G PXN paxillin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:40,227,894...40,278,785
Ensembl chr14:40,227,895...40,278,734 		JBrowse link
G PXN paxillin involved_in IEA TreeGrafter GO_REF:0000118
G SELENON selenoprotein N acts_upstream_of_or_within ISO (PMID:28106121) MGI PMID:28106121 NCBI chr 6:83,246,934...83,262,748
Ensembl chr 6:83,246,934...83,262,743 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297 		JBrowse link
G SKIL SKI like proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18212064) Ensembl
MGI		 PMID:18212064 GO_REF:0000107 NCBI chr13:109,029,831...109,059,176
Ensembl chr13:109,029,952...109,059,173 		JBrowse link
G SMAD1 SMAD family member 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:82,907,557...82,987,909
Ensembl chr 8:82,908,527...82,968,994 		JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:18212064)
(PMID:11557747), (PMID:14749725)		 Ensembl
GO_Central
MGI
TreeGrafter		 PMID:11557747 PMID:14749725 PMID:18212064 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA
ISS		 (PMID:15239668)
(PMID:15239668), (PMID:16619037), (PMID:21937600)
TGFbeta-1 dependent, in pancreatic stellate cells		 RGD
GO_Central
MGI
TreeGrafter
Ensembl
UniProt		 PMID:15239668 PMID:16371439 PMID:16619037 PMID:16891311 PMID:21937600 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1625706 RGD:2300404 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:18212064) Ensembl
GO_Central
MGI
TreeGrafter		 PMID:18212064 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G SMAD5 SMAD family member 5 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:11376112) Ensembl
GO_Central
MGI
TreeGrafter		 PMID:11376112 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:138,287,635...138,344,092
Ensembl chr 2:138,287,710...138,344,762 		JBrowse link
G SMAD6 SMAD family member 6 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:164,652,602...164,735,084
Ensembl chr 1:164,656,887...164,735,704 		JBrowse link
G SMAD7 SMAD family member 7 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:11557747) Ensembl
GO_Central
MGI
TreeGrafter		 PMID:11557747 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:98,512,800...98,543,924
Ensembl chr 1:98,514,267...98,542,382 		JBrowse link
G SMAD9 SMAD family member 9 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:12,705,652...12,727,981
Ensembl chr11:12,705,368...12,763,008 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISO (MGI:6453080|PMID:31314592) ARUK-UCL PMID:31314592 MGI:6453080 NCBI chr 2:15,227,850...15,245,679
Ensembl chr 2:15,227,881...15,245,677 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,407,316...20,471,091
Ensembl chr12:20,407,233...20,472,992 		JBrowse link
G TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12464436) Ensembl
MGI		 PMID:12464436 GO_REF:0000107 NCBI chr 5:8,827,363...8,852,814
Ensembl chr 5:8,826,840...8,852,776 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA
ISS		 (PMID:12208849), (PMID:23868260) RGD
MGI
GO_Central
TreeGrafter
UniProt		 PMID:12208849 PMID:23868260 PMID:33360052 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 RGD:127229954 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in IEA
IBA
ISS		 Ensembl
TreeGrafter
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G TGFB3 transforming growth factor beta 3 involved_in ISS
IEA
IBA		 AgBase
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:99,133,873...99,162,239
Ensembl chr 7:99,133,879...99,162,232 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA
ISS		 (PMID:14580334), (PMID:15820682)
(PMID:17078885)
(PMID:21832243)
(PMID:11285230)		 RGD
MGI
GO_Central
TreeGrafter
Ensembl
AgBase		 PMID:8272871 PMID:11285230 PMID:14580334 PMID:15820682 PMID:17078885 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2302021 RGD:2302517 RGD:737663 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:21420963) RGD
MGI
TreeGrafter
GO_Central
Ensembl		 PMID:18684975 PMID:21420963 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2302517 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in
acts_upstream_of		 ISS
ISO
IBA
IEA		 (PMID:1333192)
(PMID:25382630)		 BHF-UCL
MGI
GO_Central
TreeGrafter
Ensembl		 PMID:1333192 PMID:25382630 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796 		JBrowse link
G TGFBR3L transforming growth factor beta receptor 3 like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:71,294,960...71,298,172
Ensembl chr 2:71,294,968...71,297,927 		JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO (PMID:28811219) MGI PMID:28811219 NCBI chr12:3,847,522...3,939,054
Ensembl chr12:3,847,901...3,935,368 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18212064) Ensembl
MGI		 PMID:18212064 GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818 		JBrowse link
G USP15 ubiquitin specific peptidase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,964,380...27,082,549
Ensembl chr 5:26,964,553...27,097,444 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:36,736,049...36,888,702
Ensembl chr  X:36,760,865...36,885,250 		JBrowse link
G WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:41,136,200...41,139,986
Ensembl chr 3:41,136,202...41,138,785 		JBrowse link
G WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12595574) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:12595574 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:27,093,241...27,100,423
Ensembl chr12:27,093,679...27,100,409 		JBrowse link
G ZFYVE9 zinc finger FYVE-type containing 9 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:159,872,735...160,074,476
Ensembl chr 6:159,874,028...160,000,904 		JBrowse link
G ZMIZ1 zinc finger MIZ-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:81,409,067...81,647,808
Ensembl chr14:81,455,127...81,647,939 		JBrowse link
G ZMIZ2 zinc finger MIZ-type containing 2 NOT|involved_in ISO (PMID:16777850) UniProt PMID:16777850 NCBI chr18:50,579,650...50,598,921
Ensembl chr18:50,579,655...50,598,562 		JBrowse link
G ZYX zyxin involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:6,861,072...6,870,256
Ensembl chr18:6,861,077...6,870,265 		JBrowse link
vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT1 fms related receptor tyrosine kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr11:5,620,698...5,797,095
Ensembl chr11:5,621,212...5,795,264 		JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 involved_in IEA Ensembl
GOC		 GO_REF:0000107 GO_REF:0000108 NCBI chr 2:78,076,008...78,115,137
Ensembl chr 2:78,076,080...78,115,126 		JBrowse link
G FOXC1 forkhead box C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:837,088...840,593
Ensembl chr 7:837,171...838,805 		JBrowse link
G GAB1 GRB2 associated binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:84,257,958...84,391,511
Ensembl chr 8:84,257,965...84,391,621 		JBrowse link
G KDR kinase insert domain receptor involved_in IEA Ensembl
GOC		 GO_REF:0000107 GO_REF:0000108 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336 		JBrowse link
G MIR26A microRNA mir-26a involved_in ISO (PMID:28602162) BHF-UCL PMID:28602162 NCBI chr 5:23,112,744...23,112,827
Ensembl chr 5:23,112,744...23,112,827 		JBrowse link
G MYO1C myosin IC involved_in ISO (PMID:23262137) UniProt PMID:23262137 NCBI chr12:47,691,252...47,715,670
Ensembl chr12:47,691,256...47,718,337 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA InterPro
GOC		 GO_REF:0000002 GO_REF:0000108 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:108,974,246...109,092,316
Ensembl chr15:108,974,816...109,092,305 		JBrowse link
G NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,156,771...44,186,224
Ensembl chr 1:44,156,778...44,186,194 		JBrowse link
G PGF placental growth factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:98,149,510...98,162,784
Ensembl chr 7:98,148,994...98,162,741 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:117,193,935...117,282,151
Ensembl chr13:117,180,544...117,274,587 		JBrowse link
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta involved_in ISO (PMID:31915155) BHF-UCL PMID:31915155 NCBI chr 6:70,026,254...70,086,950
Ensembl chr 6:70,026,373...70,084,742 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,469 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
G VEGFB vascular endothelial growth factor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:7,872,873...7,876,149
Ensembl chr 2:7,872,870...7,876,118 		JBrowse link
G VEGFC vascular endothelial growth factor C involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:39,037,764...39,136,234
Ensembl chr15:39,039,311...39,132,936 		JBrowse link
G VEGFC vascular endothelial growth factor C involved_in IEA TreeGrafter GO_REF:0000118
G VEGFD vascular endothelial growth factor D involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:11,893,254...11,933,923
Ensembl chr  X:11,893,259...11,933,809 		JBrowse link
VEGF-activated neuropilin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISO (PMID:24863063)
(MGI:5287519|PMID:21828096)
(MGI:5141569|PMID:21658587)		 BHF-UCL PMID:21658587 PMID:21828096 PMID:24863063 MGI:5141569 MGI:5287519 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
Term paths to the root