PDE8A (phosphodiesterase 8A) - Rat Genome Database

Name: PDE8A
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: PDE8A (phosphodiesterase 8A) Sus scrofa

Analyze

Symbol:

PDE8A

Name:

phosphodiesterase 8A

RGD ID:

13995946

Description:

ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (inferred); 3',5'-cyclic-GMP phosphodiesterase activity (inferred); 3',5'-cyclic-nucleotide phosphodiesterase activity (inferred); INVOLVED IN cAMP catabolic process (inferred); cellular response to epidermal growth factor stimulus (inferred); positive regulation of ERK1 and ERK2 cascade (inferred); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PDE8A (phosphodiesterase 8A)	HGNC	Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Pde8a (phosphodiesterase 8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Pde8a (phosphodiesterase 8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pde8a (phosphodiesterase 8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PDE8A (phosphodiesterase 8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PDE8A (phosphodiesterase 8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pde8a (phosphodiesterase 8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PDE8A (phosphodiesterase 8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pde8a (phosphodiesterase 8A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	52,410,779 - 52,557,645 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	52,410,766 - 52,558,482 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	57,896,426 - 57,969,573 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cAMP catabolic process (IEA)

cAMP-mediated signaling (IBA)

cellular response to epidermal growth factor stimulus (IBA,IEA)

positive regulation of ERK1 and ERK2 cascade (IBA,IEA)

signal transduction (IEA)

Cellular Component

cytosol (IBA)

nucleus (IBA)

perinuclear region of cytoplasm (IBA)

Molecular Function

3',5'-cyclic-AMP phosphodiesterase activity (IBA,IEA)

3',5'-cyclic-GMP phosphodiesterase activity (IBA,IEA)

3',5'-cyclic-nucleotide phosphodiesterase activity (IEA)

hydrolase activity (IEA)

kinase binding (IEA)

metal ion binding (IEA)

protein kinase activator activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

protein kinase A (PKA) signaling pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PDE8A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	52,410,779 - 52,557,645 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	52,410,766 - 52,558,482 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	57,896,426 - 57,969,573 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PDE8A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	84,980,467 - 85,139,142 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	84,980,440 - 85,139,145 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	85,523,698 - 85,682,373 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	83,326,209 - 83,483,377 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	61,951,944 - 62,111,125 (+)	NCBI		Celera
Cytogenetic Map	15	q25.3	NCBI
HuRef	15	61,609,653 - 61,768,261 (+)	NCBI		HuRef
CHM1_1	15	85,364,949 - 85,523,920 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	82,732,711 - 82,891,368 (+)	NCBI		T2T-CHM13v2.0

Pde8a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	80,863,013 - 80,984,283 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	80,863,344 - 80,984,281 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	81,213,265 - 81,334,535 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	81,213,596 - 81,334,533 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	88,358,690 - 88,478,508 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	81,087,251 - 81,208,043 (+)	NCBI		MGSCv36	mm8
Celera	7	78,686,223 - 78,738,796 (+)	NCBI		Celera
Cytogenetic Map	7	D3	NCBI
cM Map	7	45.71	NCBI

Pde8a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	144,575,203 - 144,698,216 (+)	NCBI		GRCr8
mRatBN7.2	1	135,166,143 - 135,288,986 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	135,166,237 - 135,288,024 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	143,080,882 - 143,202,783 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	150,250,292 - 150,372,196 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	143,162,918 - 143,285,137 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	143,036,083 - 143,160,395 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	143,036,218 - 143,159,433 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	143,980,312 - 144,102,752 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	137,415,852 - 137,544,337 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	137,494,257 - 137,622,743 (+)	NCBI
Celera	1	127,217,639 - 127,339,111 (+)	NCBI		Celera
Cytogenetic Map	1	q31	NCBI

Pde8a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	14,063,123 - 14,125,220 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	14,063,117 - 14,204,297 (-)	NCBI	ChiLan1.0	ChiLan1.0

PDE8A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	73,934,543 - 74,094,624 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	78,154,258 - 78,310,579 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	63,649,336 - 63,805,613 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	82,971,764 - 83,127,963 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	82,971,986 - 83,127,957 (+)	Ensembl	panpan1.1		panPan2

PDE8A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	54,278,498 - 54,367,492 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	54,128,680 - 54,367,400 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	56,852,891 - 57,008,693 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	54,631,013 - 54,787,194 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	54,631,028 - 54,787,190 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	54,151,873 - 54,307,649 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	54,360,516 - 54,516,720 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	54,702,916 - 54,859,444 (+)	NCBI		UU_Cfam_GSD_1.0

Pde8a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	129,171,415 - 129,324,830 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936483	17,095,318 - 17,163,114 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936483	17,009,696 - 17,163,105 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PDE8A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	29	3,214,183 - 3,367,051 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	29	3,213,165 - 3,367,571 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	43,694,868 - 43,851,671 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pde8a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624768	18,180,061 - 18,352,830 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624768	18,180,066 - 18,352,749 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PDE8A
3127 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021098897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021098898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021098899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK348212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU633195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01059745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000002027 ⟹ ENSSSCP00000001978

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	52,410,779 - 52,556,789 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000002031 ⟹ ENSSSCP00000001982

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	52,410,779 - 52,556,789 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000002032 ⟹ ENSSSCP00000001983

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	52,410,779 - 52,557,645 (-)	Ensembl

RefSeq Acc Id:

XM_021098897 ⟹ XP_020954556

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	52,410,766 - 52,556,923 (-)	NCBI

Sequence:

show sequence

AGACCCGCGCTCGCCGCCGCCGCCCGCCCAGGCGGCGATGACACGGCGCCCGCGGCGGCCCCGA
GGCGCCGGGCGGGCCGTTTGCTGACCGGATCGCGGCTGCCCGCCAGCGTGTCCGCCGCGCCGCC
GCCAGCATGGGCTGCGCCCCGAGCATCCACATTTCCGAGAACCGGGCGGTGTACCACGGCGGCA
AGGAGGCCGAGGACGCGCCGGGCCCCGCGGCGCCGCCGCCGCTGCCGCCCGGCGGGCCGCGCTT
CCCACACGGCCCGAAGACCGCCGCCTCGGCCCGGGCCCGAGGCGCCAGCCTCGCGGAGTCCGAG
CCTCGCGGCAGCGGCGGCAACCAGGTAGCAATAGCTGATGTGCAATTTGGCCCCATGAGATTTC
ATCCAGATCAACTTCAGGTACTTTTAGTGTTTACCAAAGAAGATAACCAGTGTAATGGATTCTG
TAGGGCATGTGAAAAAGCAGGGTTTAAGTGTACAGTTACCAAGGAGGCTCATACTGTCCTTGCC
TGTTTCCTGGACAAACATCACGACATCATCATCATAGACCACAGAAATCCCCGGCAGCTGGATG
CAGAGGCGCTGTGCAGGTCTATCAGATCATCAAAACTGTCAGAAAACACAGTTATTATTGGTGT
AGTACGAAGGGTGGATAGAGATGAGTCATCTGTAATGTCCCTCATTGCTGCTGGCTTTACAAGG
AGGTATGTAGAAAACCCCAGCCTCATGGCCTGTTACAATGAACTGCTCCAGCTGGAATTTGGAG
AGGTGCGATCACAGCTGAAACTCAGGGCTTGTAACTCAGTATTTGCTGCATTAGAGAAAAGTCA
AGAAGCAATTGAAATTACAAGTGAAGACCACATTATACAGTATGCAAATCCGGCATTTGAAACA
ACAATGGGCTATCAGTCAGGTGAATTAATCGGGAAGGAGTTAGCAGAAGTGCCTATAAATGAAA
AAAAGGCTGATTTGCTTGACACTATAAATTCATGCATCAGGATAGGCAAGGAGTGGCAAGGGAT
TTACTCTGCCAGAAAGAAAAACGGAGACAATGTACAACAGAATGTGAAGATAATACCTGTCATG
GGACAGGGAGGAAAAATTAGACACTATGTGTCCATTATCAGAGTGTGCAATGGCAACAGTAAGG
CTGAGAAAATAACTGAATGTGTTCAGTCTGACACTCATACAGATAATCAGACAGGCAAACATAA
AGACAGGAGAAAAAGCTCCCTGGATGTCAGAACTGTTGCCTCTCGAGCAAGCGAAGTTTCCAGC
CAGAGACGACACTCCTCCATGGCCCGGATACATTCCATGACGATCGAGGCGCCCATCACCAAGG
TAATCAATATCATCAATGCTGCCCAGGAAAGCAGTCCCATGCCTGTGACAGAAGCCTTAGACCG
TGTGCTAGAAATTCTGAGAACCACTGAATTATATTCACCACAGTTTGGTGCTAAGGATGATGAT
CCTCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCTGGGAATG
AATATGTTCTTTCAACAAAAAGCCTTCAACAAGTTTCCAGCAGTATAATCACCCCCATCTCCCT
TCACGACATCCCACCACGGATAGCTCGGGCCATGGAAAATGAGGAATACTGGGACTTTGACATT
TTTGAACTTGAGGCTGCCACTCATAAAAGGCCTTTGATTTATCTTGGTCTCAAAACGTTTGCTC
GCTTTGGAGTCTGTGAATTTTTAAACTGCTCCGAGACAACACTGAGATCGTGGTTACAAATTAT
CGAAGCCAATTATCATTCTTCTAACCCCTACCACAATTCTACACATGCTGCCGATGTGCTTCAT
GCCACTGCCTATTTTCTCTGCAAAGAGAGGATAAAGCAAACTTTAGATCCACTTGATGAGGTCG
CTGCCCTCATTGCAGCCACTATTCATGATGTGGACCATCCCGGGAGAACCAACTCCTTCCTCTG
CAATGCTGGCAGCGAGCTGGCCATCTTGTATAATGACACTGCAGTGCTGGAGAGCCACCATGCG
GCCTTGGCCTTCCAGCTGACCACTGGAGATGATAAATGCAATATCTTTAAAAACATGGAGAGGA
ATGATTACCGGACGCTGCGCCAGGGTATTATCGACATGGTCTTAGCCACCGAAATGACAAAGCA
CTTCGAGCATGTCAACAAGTTTGTCAACAGCATCAACAAGCCCTTGGCAGCATTAGAAGAAGAT
GGGGAAACTGATAAAGGTCAAGAAGCCATAAACACTATGCTCAGGACTCTAGAGAACCGGACTC
TGATCAAACGAATGCTGATTAAGTGTGCTGATGTCTCCAATCCCTGCCGACCCCTGGAGCAGTG
CATTGAGTGGGCCGCACGCATCTCAGAAGAATATTTTTCTCAGACTGATGAAGAGAAGCAACAG
GACTTGCCTGTGGTGATGCCAGTTTTTGACAGAAATACCTGCAGCATCCCCAAGTCGCAGATCT
CCTTCATTGACTACTTCATCACGGACATGTTCGATGCCTGGGACGCCTTTGTAGACCTACCTGA
GTTAATGCAGCATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
AGCCTCCGCCCGCCTCCTGAATAGTGCGCGACAGAGCCGGGGCCCCAACGCCATGCCCCTCTGG
TCATCTGAATCCCTGAGTGCAGCCAGATTCCTTGGTCTTTTCCATATTAGGCAGGACAGAACCC
CGGTCTGCAGAGCCTGTAAAAGCACACGAGGACGTCAGTAACCTTCCTTAAACACCATCTGATG
CCACTGCCATAAAGTGAGACTTAGTCCACTGTACCTGGGCCTGCTGCTCTTGAGAAGGTCACAC
GAGGACCATGGTTTGCATTTGCTGCCATTAAAACATGAGCTCAGGACTGCCCCTGCAAAGGATA
TTGATGGATTTCCTGCCAGTGACAGAGAAGGCCTTGTTGCAGAGAATTCTCTCAGTTACGTTCT
GCACTAAAGAACAGCTAATGGCAATCGGATCTTTTCACCGCATAGAAGGTGCAGTCACTCTGGA
ACACTACTGAAAGTGACTTCTCAAATTGAATAGCAAATGAAAGACAAATTTTGAAGTTTGATTA
TTAATATCAAATATTGAAATGTTTTATTTATTTTATTAGAAGTTCAATATTTTCTGTGAATTTA
AAAATACTTTAAAGCCAAAGCCAACTTGAAATGCCATGACCAAATTCACATGATTCATAGTCCT
TAAATATGTATTACTTGGTGTACAGACTTATTTTCATAATGCAAATTTAAAGACATAAAATGAC
ATTTTTACTGGACTGTAGAAATATTTGTGTGTGTTAAACTTTTCTGATTGATGCTCATCAGGCA
AAGCTGTTTTGCGGGTGGGTCTGAGTCCAGAAGAGCTGAGTGAGAAGGGCCCCTTCTGTGGGGA
TCGGGGCTCTGAGACAGCTCATGCTGTCTGATGGGCCGTGCAGGTGACTCCTCAAAGGGAAAGA
AATTACTAGGACTTCACACTTTTTTCCTGAAATTTTATAACTGAATTTCCACAGGTCTGCCTTA
TTTTATACAGTGTTTCTATAAGATATTTCCCGATAAAAACAGCGAAAATGAAATATTTAGTGAA
TTGACATTTTATAACCAGTCTTGTTTTTTCATCTGCGTTAGGAATCTTTGATTCCAGGAATTTA
TAAAGGTTCTGTATCTTCACATTTTGAACAAGTGTAGTACCATAAAAAAATGACACCTGGTGAC
ATGTCAAACGCTTGTCATTTCCTTTTAAACTTGTATGTTTTTTTCCAGATAAAAATGAAATTAA
ACTATTTGTTTTTAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_021098898 ⟹ XP_020954557

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	52,410,766 - 52,558,482 (-)	NCBI

Sequence:

show sequence

CGGGAGAGGAAAGGGACCCGCAGCGCCAGAGTCTCCGCGGACTTGGAGCCTCAGAGAGGGCGGG
AGTGCGGGCAGGTCCGAGGTGGGCTGCGCCGGGGTAGCAATAGCTGATGTGCAATTTGGCCCCA
TGAGATTTCATCCAGATCAACTTCAGGTACTTTTAGTGTTTACCAAAGAAGATAACCAGTGTAA
TGGATTCTGTAGGGCATGTGAAAAAGCAGGGTTTAAGTGTACAGTTACCAAGGAGGCTCATACT
GTCCTTGCCTGTTTCCTGGACAAACATCACGACATCATCATCATAGACCACAGAAATCCCCGGC
AGCTGGATGCAGAGGCGCTGTGCAGGTCTATCAGATCATCAAAACTGTCAGAAAACACAGTTAT
TATTGGTGTAGTACGAAGGGTGGATAGAGATGAGTCATCTGTAATGTCCCTCATTGCTGCTGGC
TTTACAAGGAGGTATGTAGAAAACCCCAGCCTCATGGCCTGTTACAATGAACTGCTCCAGCTGG
AATTTGGAGAGGTGCGATCACAGCTGAAACTCAGGGCTTGTAACTCAGTATTTGCTGCATTAGA
GAAAAGTCAAGAAGCAATTGAAATTACAAGTGAAGACCACATTATACAGTATGCAAATCCGGCA
TTTGAAACAACAATGGGCTATCAGTCAGGTGAATTAATCGGGAAGGAGTTAGCAGAAGTGCCTA
TAAATGAAAAAAAGGCTGATTTGCTTGACACTATAAATTCATGCATCAGGATAGGCAAGGAGTG
GCAAGGGATTTACTCTGCCAGAAAGAAAAACGGAGACAATGTACAACAGAATGTGAAGATAATA
CCTGTCATGGGACAGGGAGGAAAAATTAGACACTATGTGTCCATTATCAGAGTGTGCAATGGCA
ACAGTAAGGCTGAGAAAATAACTGAATGTGTTCAGTCTGACACTCATACAGATAATCAGACAGG
CAAACATAAAGACAGGAGAAAAAGCTCCCTGGATGTCAGAACTGTTGCCTCTCGAGCAAGCGAA
GTTTCCAGCCAGAGACGACACTCCTCCATGGCCCGGATACATTCCATGACGATCGAGGCGCCCA
TCACCAAGGTAATCAATATCATCAATGCTGCCCAGGAAAGCAGTCCCATGCCTGTGACAGAAGC
CTTAGACCGTGTGCTAGAAATTCTGAGAACCACTGAATTATATTCACCACAGTTTGGTGCTAAG
GATGATGATCCTCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTAT
CTGGGAATGAATATGTTCTTTCAACAAAAAGCCTTCAACAAGTTTCCAGCAGTATAATCACCCC
CATCTCCCTTCACGACATCCCACCACGGATAGCTCGGGCCATGGAAAATGAGGAATACTGGGAC
TTTGACATTTTTGAACTTGAGGCTGCCACTCATAAAAGGCCTTTGATTTATCTTGGTCTCAAAA
CGTTTGCTCGCTTTGGAGTCTGTGAATTTTTAAACTGCTCCGAGACAACACTGAGATCGTGGTT
ACAAATTATCGAAGCCAATTATCATTCTTCTAACCCCTACCACAATTCTACACATGCTGCCGAT
GTGCTTCATGCCACTGCCTATTTTCTCTGCAAAGAGAGGATAAAGCAAACTTTAGATCCACTTG
ATGAGGTCGCTGCCCTCATTGCAGCCACTATTCATGATGTGGACCATCCCGGGAGAACCAACTC
CTTCCTCTGCAATGCTGGCAGCGAGCTGGCCATCTTGTATAATGACACTGCAGTGCTGGAGAGC
CACCATGCGGCCTTGGCCTTCCAGCTGACCACTGGAGATGATAAATGCAATATCTTTAAAAACA
TGGAGAGGAATGATTACCGGACGCTGCGCCAGGGTATTATCGACATGGTCTTAGCCACCGAAAT
GACAAAGCACTTCGAGCATGTCAACAAGTTTGTCAACAGCATCAACAAGCCCTTGGCAGCATTA
GAAGAAGATGGGGAAACTGATAAAGGTCAAGAAGCCATAAACACTATGCTCAGGACTCTAGAGA
ACCGGACTCTGATCAAACGAATGCTGATTAAGTGTGCTGATGTCTCCAATCCCTGCCGACCCCT
GGAGCAGTGCATTGAGTGGGCCGCACGCATCTCAGAAGAATATTTTTCTCAGACTGATGAAGAG
AAGCAACAGGACTTGCCTGTGGTGATGCCAGTTTTTGACAGAAATACCTGCAGCATCCCCAAGT
CGCAGATCTCCTTCATTGACTACTTCATCACGGACATGTTCGATGCCTGGGACGCCTTTGTAGA
CCTACCTGAGTTAATGCAGCATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATG
AAGCTGCGGAGCCTCCGCCCGCCTCCTGAATAGTGCGCGACAGAGCCGGGGCCCCAACGCCATG
CCCCTCTGGTCATCTGAATCCCTGAGTGCAGCCAGATTCCTTGGTCTTTTCCATATTAGGCAGG
ACAGAACCCCGGTCTGCAGAGCCTGTAAAAGCACACGAGGACGTCAGTAACCTTCCTTAAACAC
CATCTGATGCCACTGCCATAAAGTGAGACTTAGTCCACTGTACCTGGGCCTGCTGCTCTTGAGA
AGGTCACACGAGGACCATGGTTTGCATTTGCTGCCATTAAAACATGAGCTCAGGACTGCCCCTG
CAAAGGATATTGATGGATTTCCTGCCAGTGACAGAGAAGGCCTTGTTGCAGAGAATTCTCTCAG
TTACGTTCTGCACTAAAGAACAGCTAATGGCAATCGGATCTTTTCACCGCATAGAAGGTGCAGT
CACTCTGGAACACTACTGAAAGTGACTTCTCAAATTGAATAGCAAATGAAAGACAAATTTTGAA
GTTTGATTATTAATATCAAATATTGAAATGTTTTATTTATTTTATTAGAAGTTCAATATTTTCT
GTGAATTTAAAAATACTTTAAAGCCAAAGCCAACTTGAAATGCCATGACCAAATTCACATGATT
CATAGTCCTTAAATATGTATTACTTGGTGTACAGACTTATTTTCATAATGCAAATTTAAAGACA
TAAAATGACATTTTTACTGGACTGTAGAAATATTTGTGTGTGTTAAACTTTTCTGATTGATGCT
CATCAGGCAAAGCTGTTTTGCGGGTGGGTCTGAGTCCAGAAGAGCTGAGTGAGAAGGGCCCCTT
CTGTGGGGATCGGGGCTCTGAGACAGCTCATGCTGTCTGATGGGCCGTGCAGGTGACTCCTCAA
AGGGAAAGAAATTACTAGGACTTCACACTTTTTTCCTGAAATTTTATAACTGAATTTCCACAGG
TCTGCCTTATTTTATACAGTGTTTCTATAAGATATTTCCCGATAAAAACAGCGAAAATGAAATA
TTTAGTGAATTGACATTTTATAACCAGTCTTGTTTTTTCATCTGCGTTAGGAATCTTTGATTCC
AGGAATTTATAAAGGTTCTGTATCTTCACATTTTGAACAAGTGTAGTACCATAAAAAAATGACA
CCTGGTGACATGTCAAACGCTTGTCATTTCCTTTTAAACTTGTATGTTTTTTTCCAGATAAAAA
TGAAATTAAACTATTTGTTTTTAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_021098899 ⟹ XP_020954558

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	52,410,766 - 52,557,477 (-)	NCBI

Sequence:

show sequence

GCCCCAGGTCCGGCTGGAAGTAGCAATAGCTGATGTGCAATTTGGCCCCATGAGATTTCATCCA
GATCAACTTCAGGTACTTTTAGTGTTTACCAAAGAAGATAACCAGTGTAATGGATTCTGTAGGG
CATGTGAAAAAGCAGGGTTTAAGTGTACAGTTACCAAGGAGGCTCATACTGTCCTTGCCTGTTT
CCTGGACAAACATCACGACATCATCATCATAGACCACAGAAATCCCCGGCAGCTGGATGCAGAG
GCGCTGTGCAGGTCTATCAGATCATCAAAACTGTCAGAAAACACAGTTATTATTGGTGTAGTAC
GAAGGGTGGATAGAGATGAGTCATCTGTAATGTCCCTCATTGCTGCTGGCTTTACAAGGAGGTA
TGTAGAAAACCCCAGCCTCATGGCCTGTTACAATGAACTGCTCCAGCTGGAATTTGGAGAGGTG
CGATCACAGCTGAAACTCAGGGCTTGTAACTCAGTATTTGCTGCATTAGAGAAAAGTCAAGAAG
CAATTGAAATTACAAGTGAAGACCACATTATACAGTATGCAAATCCGGCATTTGAAACAACAAT
GGGCTATCAGTCAGGTGAATTAATCGGGAAGGAGTTAGCAGAAGTGCCTATAAATGAAAAAAAG
GCTGATTTGCTTGACACTATAAATTCATGCATCAGGATAGGCAAGGAGTGGCAAGGGATTTACT
CTGCCAGAAAGAAAAACGGAGACAATGTACAACAGAATGTGAAGATAATACCTGTCATGGGACA
GGGAGGAAAAATTAGACACTATGTGTCCATTATCAGAGTGTGCAATGGCAACAGTAAGGCTGAG
AAAATAACTGAATGTGTTCAGTCTGACACTCATACAGATAATCAGACAGGCAAACATAAAGACA
GGAGAAAAAGCTCCCTGGATGTCAGAACTGTTGCCTCTCGAGCAAGCGAAGTTTCCAGCCAGAG
ACGACACTCCTCCATGGCCCGGATACATTCCATGACGATCGAGGCGCCCATCACCAAGGTAATC
AATATCATCAATGCTGCCCAGGAAAGCAGTCCCATGCCTGTGACAGAAGCCTTAGACCGTGTGC
TAGAAATTCTGAGAACCACTGAATTATATTCACCACAGTTTGGTGCTAAGGATGATGATCCTCA
TGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCTGGGAATGAATAT
GTTCTTTCAACAAAAAGCCTTCAACAAGTTTCCAGCAGTATAATCACCCCCATCTCCCTTCACG
ACATCCCACCACGGATAGCTCGGGCCATGGAAAATGAGGAATACTGGGACTTTGACATTTTTGA
ACTTGAGGCTGCCACTCATAAAAGGCCTTTGATTTATCTTGGTCTCAAAACGTTTGCTCGCTTT
GGAGTCTGTGAATTTTTAAACTGCTCCGAGACAACACTGAGATCGTGGTTACAAATTATCGAAG
CCAATTATCATTCTTCTAACCCCTACCACAATTCTACACATGCTGCCGATGTGCTTCATGCCAC
TGCCTATTTTCTCTGCAAAGAGAGGATAAAGCAAACTTTAGATCCACTTGATGAGGTCGCTGCC
CTCATTGCAGCCACTATTCATGATGTGGACCATCCCGGGAGAACCAACTCCTTCCTCTGCAATG
CTGGCAGCGAGCTGGCCATCTTGTATAATGACACTGCAGTGCTGGAGAGCCACCATGCGGCCTT
GGCCTTCCAGCTGACCACTGGAGATGATAAATGCAATATCTTTAAAAACATGGAGAGGAATGAT
TACCGGACGCTGCGCCAGGGTATTATCGACATGGTCTTAGCCACCGAAATGACAAAGCACTTCG
AGCATGTCAACAAGTTTGTCAACAGCATCAACAAGCCCTTGGCAGCATTAGAAGAAGATGGGGA
AACTGATAAAGGTCAAGAAGCCATAAACACTATGCTCAGGACTCTAGAGAACCGGACTCTGATC
AAACGAATGCTGATTAAGTGTGCTGATGTCTCCAATCCCTGCCGACCCCTGGAGCAGTGCATTG
AGTGGGCCGCACGCATCTCAGAAGAATATTTTTCTCAGACTGATGAAGAGAAGCAACAGGACTT
GCCTGTGGTGATGCCAGTTTTTGACAGAAATACCTGCAGCATCCCCAAGTCGCAGATCTCCTTC
ATTGACTACTTCATCACGGACATGTTCGATGCCTGGGACGCCTTTGTAGACCTACCTGAGTTAA
TGCAGCATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAGCCT
CCGCCCGCCTCCTGAATAGTGCGCGACAGAGCCGGGGCCCCAACGCCATGCCCCTCTGGTCATC
TGAATCCCTGAGTGCAGCCAGATTCCTTGGTCTTTTCCATATTAGGCAGGACAGAACCCCGGTC
TGCAGAGCCTGTAAAAGCACACGAGGACGTCAGTAACCTTCCTTAAACACCATCTGATGCCACT
GCCATAAAGTGAGACTTAGTCCACTGTACCTGGGCCTGCTGCTCTTGAGAAGGTCACACGAGGA
CCATGGTTTGCATTTGCTGCCATTAAAACATGAGCTCAGGACTGCCCCTGCAAAGGATATTGAT
GGATTTCCTGCCAGTGACAGAGAAGGCCTTGTTGCAGAGAATTCTCTCAGTTACGTTCTGCACT
AAAGAACAGCTAATGGCAATCGGATCTTTTCACCGCATAGAAGGTGCAGTCACTCTGGAACACT
ACTGAAAGTGACTTCTCAAATTGAATAGCAAATGAAAGACAAATTTTGAAGTTTGATTATTAAT
ATCAAATATTGAAATGTTTTATTTATTTTATTAGAAGTTCAATATTTTCTGTGAATTTAAAAAT
ACTTTAAAGCCAAAGCCAACTTGAAATGCCATGACCAAATTCACATGATTCATAGTCCTTAAAT
ATGTATTACTTGGTGTACAGACTTATTTTCATAATGCAAATTTAAAGACATAAAATGACATTTT
TACTGGACTGTAGAAATATTTGTGTGTGTTAAACTTTTCTGATTGATGCTCATCAGGCAAAGCT
GTTTTGCGGGTGGGTCTGAGTCCAGAAGAGCTGAGTGAGAAGGGCCCCTTCTGTGGGGATCGGG
GCTCTGAGACAGCTCATGCTGTCTGATGGGCCGTGCAGGTGACTCCTCAAAGGGAAAGAAATTA
CTAGGACTTCACACTTTTTTCCTGAAATTTTATAACTGAATTTCCACAGGTCTGCCTTATTTTA
TACAGTGTTTCTATAAGATATTTCCCGATAAAAACAGCGAAAATGAAATATTTAGTGAATTGAC
ATTTTATAACCAGTCTTGTTTTTTCATCTGCGTTAGGAATCTTTGATTCCAGGAATTTATAAAG
GTTCTGTATCTTCACATTTTGAACAAGTGTAGTACCATAAAAAAATGACACCTGGTGACATGTC
AAACGCTTGTCATTTCCTTTTAAACTTGTATGTTTTTTTCCAGATAAAAATGAAATTAAACTAT
TTGTTTTTAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020954556	(Get FASTA)	NCBI Sequence Viewer
	XP_020954557	(Get FASTA)	NCBI Sequence Viewer
	XP_020954558	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000001978
	ENSSSCP00000001978.4
	ENSSSCP00000001982.4
	ENSSSCP00000001983
	ENSSSCP00000001983.4
	ENSSSCP00005014609.1
	ENSSSCP00005014690.1
	ENSSSCP00005014715.1
	ENSSSCP00005014768.1
	ENSSSCP00005014858.1
	ENSSSCP00015045387.1
	ENSSSCP00015045451.1
	ENSSSCP00015045462.1
	ENSSSCP00025040423.1
	ENSSSCP00025040528.1
	ENSSSCP00025040656.1
	ENSSSCP00030042550.1
	ENSSSCP00035030132.1
	ENSSSCP00035030137.1
	ENSSSCP00035030145.1
	ENSSSCP00040000980.1
	ENSSSCP00045004407.1
	ENSSSCP00055027780.1
	ENSSSCP00055027911.1
	ENSSSCP00055028048.1
	ENSSSCP00060024480.1
	ENSSSCP00065047518.1
	ENSSSCP00070029330.1
	ENSSSCP00070029342.1
	ENSSSCP00070029348.1
	ENSSSCP00070029357.1

RefSeq Acc Id:	XP_020954557 ⟸ XM_021098898
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1UL42 (UniProtKB/TrEMBL), A0A8D0Q9J4 (UniProtKB/TrEMBL), A0A8D0T2P5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRFHPDQLQVLLVFTKEDNQCNGFCRACEKAGFKCTVTKEAHTVLACFLDKHHDIIIIDHRNPR QLDAEALCRSIRSSKLSENTVIIGVVRRVDRDESSVMSLIAAGFTRRYVENPSLMACYNELLQL EFGEVRSQLKLRACNSVFAALEKSQEAIEITSEDHIIQYANPAFETTMGYQSGELIGKELAEVP INEKKADLLDTINSCIRIGKEWQGIYSARKKNGDNVQQNVKIIPVMGQGGKIRHYVSIIRVCNG NSKAEKITECVQSDTHTDNQTGKHKDRRKSSLDVRTVASRASEVSSQRRHSSMARIHSMTIEAP ITKVINIINAAQESSPMPVTEALDRVLEILRTTELYSPQFGAKDDDPHANDLVGGLMSDGLRRL SGNEYVLSTKSLQQVSSSIITPISLHDIPPRIARAMENEEYWDFDIFELEAATHKRPLIYLGLK TFARFGVCEFLNCSETTLRSWLQIIEANYHSSNPYHNSTHAADVLHATAYFLCKERIKQTLDPL DEVAALIAATIHDVDHPGRTNSFLCNAGSELAILYNDTAVLESHHAALAFQLTTGDDKCNIFKN MERNDYRTLRQGIIDMVLATEMTKHFEHVNKFVNSINKPLAALEEDGETDKGQEAINTMLRTLE NRTLIKRMLIKCADVSNPCRPLEQCIEWAARISEEYFSQTDEEKQQDLPVVMPVFDRNTCSIPK SQISFIDYFITDMFDAWDAFVDLPELMQHLDNNFKYWKGLDEMKLRSLRPPPE hide sequence

RefSeq Acc Id:	XP_020954558 ⟸ XM_021098899
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1UL42 (UniProtKB/TrEMBL), A0A8D0Q9J4 (UniProtKB/TrEMBL), A0A8D0T2P5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRFHPDQLQVLLVFTKEDNQCNGFCRACEKAGFKCTVTKEAHTVLACFLDKHHDIIIIDHRNPR QLDAEALCRSIRSSKLSENTVIIGVVRRVDRDESSVMSLIAAGFTRRYVENPSLMACYNELLQL EFGEVRSQLKLRACNSVFAALEKSQEAIEITSEDHIIQYANPAFETTMGYQSGELIGKELAEVP INEKKADLLDTINSCIRIGKEWQGIYSARKKNGDNVQQNVKIIPVMGQGGKIRHYVSIIRVCNG NSKAEKITECVQSDTHTDNQTGKHKDRRKSSLDVRTVASRASEVSSQRRHSSMARIHSMTIEAP ITKVINIINAAQESSPMPVTEALDRVLEILRTTELYSPQFGAKDDDPHANDLVGGLMSDGLRRL SGNEYVLSTKSLQQVSSSIITPISLHDIPPRIARAMENEEYWDFDIFELEAATHKRPLIYLGLK TFARFGVCEFLNCSETTLRSWLQIIEANYHSSNPYHNSTHAADVLHATAYFLCKERIKQTLDPL DEVAALIAATIHDVDHPGRTNSFLCNAGSELAILYNDTAVLESHHAALAFQLTTGDDKCNIFKN MERNDYRTLRQGIIDMVLATEMTKHFEHVNKFVNSINKPLAALEEDGETDKGQEAINTMLRTLE NRTLIKRMLIKCADVSNPCRPLEQCIEWAARISEEYFSQTDEEKQQDLPVVMPVFDRNTCSIPK SQISFIDYFITDMFDAWDAFVDLPELMQHLDNNFKYWKGLDEMKLRSLRPPPE hide sequence

RefSeq Acc Id:	XP_020954556 ⟸ XM_021098897
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1UL47 (UniProtKB/TrEMBL), A0A480KMJ1 (UniProtKB/TrEMBL), A0A8D0T250 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCAPSIHISENRAVYHGGKEAEDAPGPAAPPPLPPGGPRFPHGPKTAASARARGASLAESEPR GSGGNQVAIADVQFGPMRFHPDQLQVLLVFTKEDNQCNGFCRACEKAGFKCTVTKEAHTVLACF LDKHHDIIIIDHRNPRQLDAEALCRSIRSSKLSENTVIIGVVRRVDRDESSVMSLIAAGFTRRY VENPSLMACYNELLQLEFGEVRSQLKLRACNSVFAALEKSQEAIEITSEDHIIQYANPAFETTM GYQSGELIGKELAEVPINEKKADLLDTINSCIRIGKEWQGIYSARKKNGDNVQQNVKIIPVMGQ GGKIRHYVSIIRVCNGNSKAEKITECVQSDTHTDNQTGKHKDRRKSSLDVRTVASRASEVSSQR RHSSMARIHSMTIEAPITKVINIINAAQESSPMPVTEALDRVLEILRTTELYSPQFGAKDDDPH ANDLVGGLMSDGLRRLSGNEYVLSTKSLQQVSSSIITPISLHDIPPRIARAMENEEYWDFDIFE LEAATHKRPLIYLGLKTFARFGVCEFLNCSETTLRSWLQIIEANYHSSNPYHNSTHAADVLHAT AYFLCKERIKQTLDPLDEVAALIAATIHDVDHPGRTNSFLCNAGSELAILYNDTAVLESHHAAL AFQLTTGDDKCNIFKNMERNDYRTLRQGIIDMVLATEMTKHFEHVNKFVNSINKPLAALEEDGE TDKGQEAINTMLRTLENRTLIKRMLIKCADVSNPCRPLEQCIEWAARISEEYFSQTDEEKQQDL PVVMPVFDRNTCSIPKSQISFIDYFITDMFDAWDAFVDLPELMQHLDNNFKYWKGLDEMKLRSL RPPPE hide sequence

Ensembl Acc Id:

ENSSSCP00000001978 ⟸ ENSSSCT00000002027

Ensembl Acc Id:

ENSSSCP00000001983 ⟸ ENSSSCT00000002032

Ensembl Acc Id:

ENSSSCP00000001982 ⟸ ENSSSCT00000002031

Protein Domains

PAS PDEase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000001810	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005015561	UniProtKB/TrEMBL
	ENSSSCG00015078936	UniProtKB/TrEMBL
	ENSSSCG00025066866	UniProtKB/TrEMBL
	ENSSSCG00030065867	UniProtKB/TrEMBL
	ENSSSCG00035055617	UniProtKB/TrEMBL
	ENSSSCG00040002560	UniProtKB/TrEMBL
	ENSSSCG00045003894	UniProtKB/TrEMBL
	ENSSSCG00055017505	UniProtKB/TrEMBL
	ENSSSCG00060042192	UniProtKB/TrEMBL
	ENSSSCG00065077145	UniProtKB/TrEMBL
	ENSSSCG00070017737	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000002027	ENTREZGENE
	ENSSSCT00000002027.5	UniProtKB/TrEMBL
	ENSSSCT00000002031.5	UniProtKB/TrEMBL
	ENSSSCT00000002032	ENTREZGENE
	ENSSSCT00000002032.5	UniProtKB/TrEMBL
	ENSSSCT00005024295.1	UniProtKB/TrEMBL
	ENSSSCT00005024403.1	UniProtKB/TrEMBL
	ENSSSCT00005024432.1	UniProtKB/TrEMBL
	ENSSSCT00005024508.1	UniProtKB/TrEMBL
	ENSSSCT00005024678.1	UniProtKB/TrEMBL
	ENSSSCT00015107403.1	UniProtKB/TrEMBL
	ENSSSCT00015107540.1	UniProtKB/TrEMBL
	ENSSSCT00015107570.1	UniProtKB/TrEMBL
	ENSSSCT00025092115.1	UniProtKB/TrEMBL
	ENSSSCT00025092362.1	UniProtKB/TrEMBL
	ENSSSCT00025092646.1	UniProtKB/TrEMBL
	ENSSSCT00030092468.1	UniProtKB/TrEMBL
	ENSSSCT00035074265.1	UniProtKB/TrEMBL
	ENSSSCT00035074275.1	UniProtKB/TrEMBL
	ENSSSCT00035074291.1	UniProtKB/TrEMBL
	ENSSSCT00040003282.1	UniProtKB/TrEMBL
	ENSSSCT00045006477.1	UniProtKB/TrEMBL
	ENSSSCT00055034982.1	UniProtKB/TrEMBL
	ENSSSCT00055035144.1	UniProtKB/TrEMBL
	ENSSSCT00055035323.1	UniProtKB/TrEMBL
	ENSSSCT00060057209.1	UniProtKB/TrEMBL
	ENSSSCT00065106774.1	UniProtKB/TrEMBL
	ENSSSCT00070035120.1	UniProtKB/TrEMBL
	ENSSSCT00070035132.1	UniProtKB/TrEMBL
	ENSSSCT00070035139.1	UniProtKB/TrEMBL
	ENSSSCT00070035148.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1300.10	UniProtKB/TrEMBL
	3.40.50.2300	UniProtKB/TrEMBL
	PAS domain	UniProtKB/TrEMBL
InterPro	HD/PDEase_dom	UniProtKB/TrEMBL
	PAS	UniProtKB/TrEMBL
	PAS-like_dom_sf	UniProtKB/TrEMBL
	PDEase	UniProtKB/TrEMBL
	PDEase_catalytic_dom	UniProtKB/TrEMBL
	PDEase_catalytic_dom_sf	UniProtKB/TrEMBL
	PDEase_CS	UniProtKB/TrEMBL
	PDEase_PDE8	UniProtKB/TrEMBL
NCBI Gene	PDE8A	ENTREZGENE
PANTHER	CYCLIC NUCLEOTIDE PHOSPHODIESTERASE	UniProtKB/TrEMBL
	HIGH AFFINITY CAMP-SPECIFIC AND IBMX-INSENSITIVE 3',5'-CYCLIC PHOSPHODIESTERASE 8A	UniProtKB/TrEMBL
Pfam	PAS_9	UniProtKB/TrEMBL
	PDE8	UniProtKB/TrEMBL
	PDEase_I	UniProtKB/TrEMBL
PRINTS	PDIESTERASE1	UniProtKB/TrEMBL
PROSITE	PAS	UniProtKB/TrEMBL
	PDEASE_I_1	UniProtKB/TrEMBL
	PDEASE_I_2	UniProtKB/TrEMBL
SMART	HDc	UniProtKB/TrEMBL
	PAS	UniProtKB/TrEMBL
Superfamily-SCOP	HD-domain/PDEase-like	UniProtKB/TrEMBL
	SSF55785	UniProtKB/TrEMBL
UniProt	A0A480KMJ1	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UHC5_PIG	UniProtKB/TrEMBL
	A0A4X1UL42	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UL47	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0IIL8_PIG	UniProtKB/TrEMBL
	A0A8D0IS68_PIG	UniProtKB/TrEMBL
	A0A8D0LJH7_PIG	UniProtKB/TrEMBL
	A0A8D0Q9J4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0T250	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0T2P5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0UE39_PIG	UniProtKB/TrEMBL
	A0A8D0UEK6_PIG	UniProtKB/TrEMBL
	A0A8D1A823_PIG	UniProtKB/TrEMBL
	F1RI93_PIG	UniProtKB/TrEMBL
	F1RMJ5_PIG	UniProtKB/TrEMBL
	F1RMJ6_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:91263	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

RGD Manual Annotations