FEZ1 (fasciculation and elongation protein zeta 1) - Rat Genome Database

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Gene: FEZ1 (fasciculation and elongation protein zeta 1) Sus scrofa
Analyze
Symbol: FEZ1
Name: fasciculation and elongation protein zeta 1
RGD ID: 14126267
Description: ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); establishment of cell polarity (ortholog); establishment of mitochondrion localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH chromosome 11 partial duplication syndrome (ortholog); Dwarfism (ortholog); holoprosencephaly 11 (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: fasciculation and elongation protein zeta 1 (zygin I); fasciculation and elongation protein zeta-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl952,621,183 - 52,672,660 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1952,621,175 - 52,672,660 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2958,321,965 - 58,348,192 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
axon  (IBA,ISO)
cell projection  (ISO)
centrosome  (IEA)
cytoplasm  (IBA,IEA)
dendrite  (ISO)
Golgi apparatus  (IEA)
growth cone  (ISO)
neuronal cell body  (ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:30032202  


Genomics

Comparative Map Data
FEZ1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl952,621,183 - 52,672,660 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1952,621,175 - 52,672,660 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2958,321,965 - 58,348,192 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FEZ1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811125,442,881 - 125,496,265 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11125,442,881 - 125,592,568 (-)EnsemblGRCh38hg38GRCh38
GRCh3711125,312,777 - 125,366,161 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611124,820,858 - 124,871,333 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411124,863,305 - 124,871,333NCBI
Celera11122,475,971 - 122,526,454 (-)NCBICelera
Cytogenetic Map11q24.2NCBI
HuRef11121,257,207 - 121,307,713 (-)NCBIHuRef
CHM1_111125,201,870 - 125,252,371 (-)NCBICHM1_1
T2T-CHM13v2.011125,471,573 - 125,524,945 (-)NCBIT2T-CHM13v2.0
Fez1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39936,732,694 - 36,790,220 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl936,733,160 - 36,790,220 (+)EnsemblGRCm39 Ensembl
GRCm38936,821,398 - 36,878,926 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl936,821,864 - 36,878,924 (+)EnsemblGRCm38mm10GRCm38
MGSCv37936,651,244 - 36,686,225 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36936,582,480 - 36,628,593 (+)NCBIMGSCv36mm8
Celera934,040,032 - 34,083,023 (+)NCBICelera
Cytogenetic Map9A4NCBI
cM Map920.69NCBI
Fez1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8844,733,288 - 44,778,519 (+)NCBIGRCr8
mRatBN7.2836,544,462 - 36,589,684 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl836,544,535 - 36,589,683 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx840,554,068 - 40,599,499 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0838,837,136 - 38,882,569 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0836,700,025 - 36,745,464 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0839,305,128 - 39,350,270 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl839,305,128 - 39,350,270 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0839,307,579 - 39,353,313 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4838,078,328 - 38,123,983 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1838,087,093 - 38,132,749 (+)NCBI
Celera837,851,976 - 37,897,230 (-)NCBICelera
Cytogenetic Map8q22NCBI
Fez1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541226,477,301 - 26,531,354 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541226,477,995 - 26,530,686 (-)NCBIChiLan1.0ChiLan1.0
FEZ1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29126,140,622 - 126,191,057 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111127,245,630 - 127,296,035 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011120,272,187 - 120,322,600 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111124,186,241 - 124,236,403 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11124,182,901 - 124,236,403 (-)Ensemblpanpan1.1panPan2
FEZ1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.159,001,927 - 9,044,330 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl59,001,989 - 9,044,332 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha59,045,434 - 9,088,812 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.058,940,817 - 8,984,967 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl58,940,786 - 8,984,968 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.159,012,637 - 9,056,170 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.058,982,968 - 9,026,843 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.059,019,529 - 9,062,951 (+)NCBIUU_Cfam_GSD_1.0
Fez1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947107,623,764 - 107,669,772 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367431,871,664 - 1,903,245 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367431,871,808 - 1,917,370 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC103248766
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11116,617,835 - 116,668,601 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1116,617,714 - 116,668,574 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660439,401,860 - 9,506,604 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fez1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249271,469,025 - 1,512,790 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249271,470,218 - 1,512,780 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FEZ1
826 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
10 3 23 3 3 10 8 23 1 6

Sequence


Ensembl Acc Id: ENSSSCT00000016578   ⟹   ENSSSCP00000016133
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl952,621,183 - 52,672,660 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000030791   ⟹   ENSSSCP00000026860
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl952,621,178 - 52,672,520 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000038882   ⟹   ENSSSCP00000045521
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl952,623,592 - 52,672,508 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000059125   ⟹   ENSSSCP00000053631
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl952,623,592 - 52,672,508 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000079685   ⟹   ENSSSCP00000073032
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl952,623,592 - 52,672,508 (-)Ensembl
RefSeq Acc Id: XM_013979543   ⟹   XP_013834997
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1952,621,175 - 52,672,660 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021063094   ⟹   XP_020918753
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1952,621,175 - 52,672,570 (-)NCBI
Sequence:
RefSeq Acc Id: XP_013834997   ⟸   XM_013979543
- Peptide Label: isoform X1
- UniProtKB: A0A4X1VGD8 (UniProtKB/TrEMBL),   A0A480N2M3 (UniProtKB/TrEMBL),   A0A8D1N5H8 (UniProtKB/TrEMBL),   F1S777 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020918753   ⟸   XM_021063094
- Peptide Label: isoform X2
- UniProtKB: A0A8D0WDW2 (UniProtKB/TrEMBL),   A0A480QTK9 (UniProtKB/TrEMBL),   A0A8D1QQX6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000026860   ⟸   ENSSSCT00000030791
Ensembl Acc Id: ENSSSCP00000073032   ⟸   ENSSSCT00000079685
Ensembl Acc Id: ENSSSCP00000016133   ⟸   ENSSSCT00000016578
Ensembl Acc Id: ENSSSCP00000053631   ⟸   ENSSSCT00000059125
Ensembl Acc Id: ENSSSCP00000045521   ⟸   ENSSSCT00000038882


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000015212 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015011046 UniProtKB/TrEMBL
  ENSSSCG00025075183 UniProtKB/TrEMBL
  ENSSSCG00030032697 UniProtKB/TrEMBL
  ENSSSCG00035050958 UniProtKB/TrEMBL
  ENSSSCG00040016305 UniProtKB/TrEMBL
  ENSSSCG00045033240 UniProtKB/TrEMBL
  ENSSSCG00050055695 UniProtKB/TrEMBL
  ENSSSCG00055014878 UniProtKB/TrEMBL
  ENSSSCG00060043739 UniProtKB/TrEMBL
  ENSSSCG00065048490 UniProtKB/TrEMBL
  ENSSSCG00070024218 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000016578 ENTREZGENE
  ENSSSCT00000016578.4 UniProtKB/TrEMBL
  ENSSSCT00015014526.1 UniProtKB/TrEMBL
  ENSSSCT00015014576.1 UniProtKB/TrEMBL
  ENSSSCT00015014606.1 UniProtKB/TrEMBL
  ENSSSCT00015014641.1 UniProtKB/TrEMBL
  ENSSSCT00025103637.1 UniProtKB/TrEMBL
  ENSSSCT00025103679.1 UniProtKB/TrEMBL
  ENSSSCT00025103727.1 UniProtKB/TrEMBL
  ENSSSCT00025103779.1 UniProtKB/TrEMBL
  ENSSSCT00030045197.1 UniProtKB/TrEMBL
  ENSSSCT00030045241.1 UniProtKB/TrEMBL
  ENSSSCT00030045281.1 UniProtKB/TrEMBL
  ENSSSCT00030045310.1 UniProtKB/TrEMBL
  ENSSSCT00035067885.1 UniProtKB/TrEMBL
  ENSSSCT00035067888.1 UniProtKB/TrEMBL
  ENSSSCT00035067894.1 UniProtKB/TrEMBL
  ENSSSCT00035067906.1 UniProtKB/TrEMBL
  ENSSSCT00035067909.1 UniProtKB/TrEMBL
  ENSSSCT00040021926.1 UniProtKB/TrEMBL
  ENSSSCT00040021958.1 UniProtKB/TrEMBL
  ENSSSCT00040021973.1 UniProtKB/TrEMBL
  ENSSSCT00045056794.1 UniProtKB/TrEMBL
  ENSSSCT00045056863.1 UniProtKB/TrEMBL
  ENSSSCT00045056927.1 UniProtKB/TrEMBL
  ENSSSCT00050075985.1 UniProtKB/TrEMBL
  ENSSSCT00050075988.1 UniProtKB/TrEMBL
  ENSSSCT00050075992.1 UniProtKB/TrEMBL
  ENSSSCT00055029324.1 UniProtKB/TrEMBL
  ENSSSCT00055029390.1 UniProtKB/TrEMBL
  ENSSSCT00055029459.1 UniProtKB/TrEMBL
  ENSSSCT00055029523.1 UniProtKB/TrEMBL
  ENSSSCT00060059324.1 UniProtKB/TrEMBL
  ENSSSCT00060059325.1 UniProtKB/TrEMBL
  ENSSSCT00060059327.1 UniProtKB/TrEMBL
  ENSSSCT00065066324.1 UniProtKB/TrEMBL
  ENSSSCT00065066328.1 UniProtKB/TrEMBL
  ENSSSCT00065066335.1 UniProtKB/TrEMBL
  ENSSSCT00065066341.1 UniProtKB/TrEMBL
  ENSSSCT00070048366.1 UniProtKB/TrEMBL
  ENSSSCT00070048369.1 UniProtKB/TrEMBL
  ENSSSCT00070048375.1 UniProtKB/TrEMBL
InterPro FEZ UniProtKB/TrEMBL
KEGG Report ssc:100526005 UniProtKB/TrEMBL
NCBI Gene FEZ1 ENTREZGENE
PANTHER PTHR12394 UniProtKB/TrEMBL
  PTHR12394:SF4 UniProtKB/TrEMBL
Pfam FEZ UniProtKB/TrEMBL
UniProt A0A480N2M3 ENTREZGENE, UniProtKB/TrEMBL
  A0A480QTK9 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1VGB6_PIG UniProtKB/TrEMBL
  A0A4X1VGC1_PIG UniProtKB/TrEMBL
  A0A4X1VGD8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0MPN9_PIG UniProtKB/TrEMBL
  A0A8D0WDW2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1A8U3_PIG UniProtKB/TrEMBL
  A0A8D1AB92_PIG UniProtKB/TrEMBL
  A0A8D1N5H8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1QQX6 ENTREZGENE, UniProtKB/TrEMBL
  F1S777 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:88092 ENTREZGENE