DUSP22 (dual specificity phosphatase 22) - Rat Genome Database

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Gene: DUSP22 (dual specificity phosphatase 22) Sus scrofa
Analyze
Symbol: DUSP22
Name: dual specificity phosphatase 22
RGD ID: 14253199
Description: ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (inferred); protein tyrosine kinase binding (inferred); protein tyrosine phosphatase activity (inferred); INVOLVED IN negative regulation of T cell activation (ortholog); negative regulation of T cell mediated immunity (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); filamentous actin (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dual specificity protein phosphatase 22
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl743,487 - 96,267 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1743,437 - 96,270 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DUSP22
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl743,487 - 96,267 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1743,437 - 96,270 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
DUSP22
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386292,487 - 351,355 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6291,630 - 351,355 (+)EnsemblGRCh38hg38GRCh38
GRCh376292,487 - 351,355 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366237,101 - 296,355 (+)NCBINCBI36Build 36hg18NCBI36
Build 346237,100 - 296,353NCBI
Celera63,913 - 4,374 (-)NCBICelera
Cytogenetic Map6p25.3NCBI
HuRef6218,216 - 221,471 (+)NCBIHuRef
HuRef6144,304 - 164,165 (+)NCBIHuRef
CHM1_16290,513 - 349,836 (+)NCBICHM1_1
T2T-CHM13v2.06147,423 - 206,310 (+)NCBIT2T-CHM13v2.0
Dusp22
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391330,844,042 - 30,895,215 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1330,843,982 - 30,895,214 (+)EnsemblGRCm39 Ensembl
GRCm381330,660,059 - 30,711,232 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1330,659,999 - 30,711,231 (+)EnsemblGRCm38mm10GRCm38
MGSCv371330,751,965 - 30,803,094 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361330,667,561 - 30,718,690 (+)NCBIMGSCv36mm8
Celera1330,874,241 - 30,925,414 (+)NCBICelera
Cytogenetic Map13A3.2NCBI
cM Map1313.26NCBI
Dusp22
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81733,989,637 - 34,040,021 (-)NCBIGRCr8
mRatBN7.21733,780,980 - 33,831,241 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1733,780,981 - 33,831,321 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1733,621,260 - 33,670,371 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01735,225,129 - 35,274,240 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01733,617,064 - 33,666,176 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01734,986,589 - 35,037,297 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1734,986,591 - 35,037,076 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01738,366,974 - 38,417,681 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41740,229,790 - 40,281,414 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11740,232,640 - 40,394,580 (-)NCBI
Celera1733,321,675 - 33,372,005 (-)NCBICelera
Cytogenetic Map17p12NCBI
Dusp22
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546512,551,063 - 12,592,572 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546512,551,063 - 12,597,386 (-)NCBIChiLan1.0ChiLan1.0
DUSP22
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2514,906,929 - 14,983,734 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1610,898,167 - 10,974,897 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06107,145 - 180,777 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16242,121 - 301,248 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6242,121 - 301,248 (+)Ensemblpanpan1.1panPan2
DUSP22
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.135678,320 - 733,225 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl35678,155 - 732,397 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha35689,526 - 745,448 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.035625,303 - 681,338 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl35625,022 - 680,993 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.135611,650 - 667,585 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.035630,246 - 686,012 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0351,965,530 - 2,021,399 (+)NCBIUU_Cfam_GSD_1.0
Dusp22
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494625,092,590 - 25,161,088 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366331,459,386 - 1,528,082 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366331,459,487 - 1,528,080 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DUSP22
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11771,798,515 - 71,855,642 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1771,799,014 - 71,855,601 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666044217,631 - 275,611 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dusp22
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475623,968,017 - 24,017,332 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475623,968,148 - 24,017,340 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in DUSP22
335 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1 1 2 2
Low 10 3 3 4 21 2 3 3
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021100089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021100090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021100091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002346217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK349404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01070207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSSCT00000040348   ⟹   ENSSSCP00000055395
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl743,486 - 92,100 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000041166   ⟹   ENSSSCP00000052632
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl743,487 - 96,267 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000044982   ⟹   ENSSSCP00000056703
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl743,598 - 96,267 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000105559   ⟹   ENSSSCP00000079067
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl787,360 - 96,266 (+)Ensembl
RefSeq Acc Id: XM_021100089   ⟹   XP_020955748
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,445 - 95,347 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021100090   ⟹   XP_020955749
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,437 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021100091   ⟹   XP_020955750
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1753,521 - 95,602 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346206
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,483 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346207
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,471 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346208
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,659 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346209
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,603 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346210
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,479 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346211
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,480 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346212
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,479 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346213
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,673 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346214
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,625 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346215
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,474 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346216
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,600 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002346217
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1743,669 - 96,270 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020955749   ⟸   XM_021100090
- Peptide Label: isoform X2
- UniProtKB: A0A4X1SY59 (UniProtKB/TrEMBL),   A0A287BKV1 (UniProtKB/TrEMBL),   A0A4X1SZ99 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020955748   ⟸   XM_021100089
- Peptide Label: isoform X1
- UniProtKB: A0A287B979 (UniProtKB/TrEMBL),   A0A4X1SY49 (UniProtKB/TrEMBL),   A0A8D0N3H8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020955750   ⟸   XM_021100091
- Peptide Label: isoform X3
- UniProtKB: A0A8D0TYG5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000056703   ⟸   ENSSSCT00000044982
RefSeq Acc Id: ENSSSCP00000055395   ⟸   ENSSSCT00000040348
RefSeq Acc Id: ENSSSCP00000052632   ⟸   ENSSSCT00000041166
RefSeq Acc Id: ENSSSCP00000079067   ⟸   ENSSSCT00000105559

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000031489 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015021335 UniProtKB/TrEMBL
  ENSSSCG00025072234 UniProtKB/TrEMBL
  ENSSSCG00030015586 UniProtKB/TrEMBL
  ENSSSCG00035036580 UniProtKB/TrEMBL
  ENSSSCG00040030444 UniProtKB/TrEMBL
  ENSSSCG00045016231 UniProtKB/TrEMBL
  ENSSSCG00050067222 UniProtKB/TrEMBL
  ENSSSCG00055018506 UniProtKB/TrEMBL
  ENSSSCG00060065555 UniProtKB/TrEMBL
  ENSSSCG00065043840 UniProtKB/TrEMBL
  ENSSSCG00070005049 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000041166 ENTREZGENE
  ENSSSCT00000041166.3 UniProtKB/TrEMBL
  ENSSSCT00000044982.2 UniProtKB/TrEMBL
  ENSSSCT00000105559.1 UniProtKB/TrEMBL
  ENSSSCT00015028453.1 UniProtKB/TrEMBL
  ENSSSCT00015028692.1 UniProtKB/TrEMBL
  ENSSSCT00025099347.1 UniProtKB/TrEMBL
  ENSSSCT00025099442.1 UniProtKB/TrEMBL
  ENSSSCT00025099549.1 UniProtKB/TrEMBL
  ENSSSCT00030021577.1 UniProtKB/TrEMBL
  ENSSSCT00030021582.1 UniProtKB/TrEMBL
  ENSSSCT00030021587.1 UniProtKB/TrEMBL
  ENSSSCT00035048484.1 UniProtKB/TrEMBL
  ENSSSCT00035048488.1 UniProtKB/TrEMBL
  ENSSSCT00040041076.1 UniProtKB/TrEMBL
  ENSSSCT00040041106.1 UniProtKB/TrEMBL
  ENSSSCT00040041128.1 UniProtKB/TrEMBL
  ENSSSCT00045027645.1 UniProtKB/TrEMBL
  ENSSSCT00045027697.1 UniProtKB/TrEMBL
  ENSSSCT00045027763.1 UniProtKB/TrEMBL
  ENSSSCT00050091688.1 UniProtKB/TrEMBL
  ENSSSCT00050091693.1 UniProtKB/TrEMBL
  ENSSSCT00050091699.1 UniProtKB/TrEMBL
  ENSSSCT00055036192.1 UniProtKB/TrEMBL
  ENSSSCT00055036285.1 UniProtKB/TrEMBL
  ENSSSCT00060089579.1 UniProtKB/TrEMBL
  ENSSSCT00060089628.1 UniProtKB/TrEMBL
  ENSSSCT00065059974.1 UniProtKB/TrEMBL
  ENSSSCT00065059978.1 UniProtKB/TrEMBL
  ENSSSCT00065059980.1 UniProtKB/TrEMBL
  ENSSSCT00070009603.1 UniProtKB/TrEMBL
  ENSSSCT00070009606.1 UniProtKB/TrEMBL
  ENSSSCT00070009612.1 UniProtKB/TrEMBL
  ENSSSCT00070009621.1 UniProtKB/TrEMBL
  ENSSSCT00070009635.1 UniProtKB/TrEMBL
Gene3D-CATH 3.90.190.10 UniProtKB/TrEMBL
InterPro Dual-sp_phosphatase_cat-dom UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/TrEMBL
  TYR_PHOSPHATASE_dom UniProtKB/TrEMBL
  TYR_PHOSPHATASE_DUAL_dom UniProtKB/TrEMBL
NCBI Gene DUSP22 ENTREZGENE
PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 22 UniProtKB/TrEMBL
  DUAL SPECIFICITY PROTEIN PHOSPHATASE DDB_G0269404-RELATED UniProtKB/TrEMBL
Pfam DSPc UniProtKB/TrEMBL
PRINTS ADSPHPHTASE UniProtKB/TrEMBL
PROSITE TYR_PHOSPHATASE_2 UniProtKB/TrEMBL
  TYR_PHOSPHATASE_DUAL UniProtKB/TrEMBL
SMART DSPc UniProtKB/TrEMBL
Superfamily-SCOP SSF52799 UniProtKB/TrEMBL
UniProt A0A287B979 ENTREZGENE, UniProtKB/TrEMBL
  A0A287BKV1 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SY49 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SY59 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SY76_PIG UniProtKB/TrEMBL
  A0A4X1SZ99 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SZR8_PIG UniProtKB/TrEMBL
  A0A8D0N3H8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0TYG5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FJI9_PIG UniProtKB/TrEMBL
VGNC ID VGNC:87482 ENTREZGENE