PRKD2 (protein kinase D2) - Rat Genome Database

Name: PRKD2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: PRKD2 (protein kinase D2) Sus scrofa

Analyze

Symbol:

PRKD2

Name:

protein kinase D2

RGD ID:

14285575

Description:

ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to vascular endothelial growth factor stimulus (ortholog); intracellular signal transduction (ortholog); positive regulation of DNA biosynthetic process (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); polycystic ovary syndrome (ortholog); Walker-Warburg syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

serine/threonine-protein kinase D2

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PRKD2 (protein kinase D2)	HGNC	Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Prkd2 (protein kinase D2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Prkd2 (protein kinase D2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Prkd2 (protein kinase D2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PRKD2 (protein kinase D2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PRKD2 (protein kinase D2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Prkd2 (protein kinase D2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	PRKD2 (protein kinase D2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Prkd2 (protein kinase D2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	52,559,393 - 52,599,132 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	52,559,066 - 52,599,174 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	47,880,007 - 47,919,799 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

B-Cell Chronic Lymphocytic Leukemia (ISO)

polycystic ovary syndrome (ISO)

Walker-Warburg syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell death (IEA)

cellular response to vascular endothelial growth factor stimulus (ISO)

intracellular signal transduction (ISO)

peptidyl-serine phosphorylation (IEA)

peptidyl-threonine phosphorylation (IEA)

positive regulation of angiogenesis (IEA)

positive regulation of blood vessel endothelial cell migration (IEA)

positive regulation of cell adhesion (IEA)

positive regulation of CREB transcription factor activity (IEA)

positive regulation of DNA biosynthetic process (IEA,ISO)

positive regulation of DNA-binding transcription factor activity (ISO)

positive regulation of endothelial cell chemotaxis (ISO)

positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway (IEA)

positive regulation of endothelial cell migration (ISO)

positive regulation of endothelial cell proliferation (IEA)

positive regulation of ERK1 and ERK2 cascade (IEA,ISO)

positive regulation of fibroblast growth factor receptor signaling pathway (IEA)

positive regulation of histone deacetylase activity (IEA)

positive regulation of interleukin-2 production (IEA,ISO)

positive regulation of interleukin-8 production (IEA)

positive regulation of intracellular signal transduction (ISO)

positive regulation of NF-kappaB transcription factor activity (IEA)

positive regulation of peptidyl-serine phosphorylation (IEA)

positive regulation of T cell receptor signaling pathway (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA)

positive regulation of vascular endothelial growth factor receptor signaling pathway (IEA)

protein autophosphorylation (IEA)

protein kinase D signaling (IBA)

protein phosphorylation (ISO)

T cell receptor signaling pathway (IEA)

vascular endothelial growth factor receptor signaling pathway (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (IEA)

membrane (IEA)

nucleoplasm (IEA)

nucleus (ISO)

Molecular Function

ATP binding (IEA)

calcium-dependent protein kinase C activity (IEA)

metal ion binding (IEA)

protein binding (ISO)

protein kinase activity (ISO)

protein kinase C binding (IEA)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (ISO)

protein threonine kinase activity (IEA)

References

Additional References at PubMed

PMID:14681463

Genomics

Comparative Map Data

PRKD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	52,559,393 - 52,599,132 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	52,559,066 - 52,599,174 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	47,880,007 - 47,919,799 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PRKD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	46,674,275 - 46,717,127 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	46,674,316 - 46,717,114 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	47,177,573 - 47,220,371 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	51,869,413 - 51,912,224 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	19	51,869,412 - 51,911,506	NCBI
Celera	19	43,981,103 - 44,023,914 (-)	NCBI
Cytogenetic Map	19	q13.32	NCBI
HuRef	19	43,602,696 - 43,645,312 (-)	NCBI		HuRef
CHM1_1	19	47,179,449 - 47,222,284 (-)	NCBI		CHM1_1

Prkd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	16,576,827 - 16,604,386 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	7	16,576,827 - 16,604,389 (+)	Ensembl
GRCm38	7	16,842,902 - 16,870,461 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	16,842,902 - 16,870,464 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	17,428,414 - 17,455,810 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	7	16,001,587 - 16,028,983 (+)	NCBI			mm8
Celera	7	14,041,053 - 14,076,870 (+)	NCBI		Celera
Cytogenetic Map	7	A2	NCBI

Prkd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	1	77,513,625 - 77,542,386 (+)	NCBI
Rnor_6.0 Ensembl	1	78,767,911 - 78,796,231 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	1	78,767,911 - 78,796,223 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	1	80,015,106 - 80,043,535 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	77,168,290 - 77,197,277 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	1	77,246,400 - 77,275,388 (+)	NCBI
Celera	1	71,999,137 - 72,027,468 (+)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Prkd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955574	723,933 - 750,793 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955574	723,933 - 750,794 (-)	NCBI	ChiLan1.0	ChiLan1.0

PRKD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	52,195,096 - 52,238,758 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	52,195,303 - 52,237,731 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	43,666,591 - 43,710,858 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

PRKD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	1	109,207,067 - 109,330,007 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	1	109,206,400 - 109,241,529 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Prkd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936664	524,532 - 551,451 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PRKD2
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	40,028,214 - 40,071,523 (-)	NCBI
ChlSab1.1 Ensembl	6	40,027,552 - 40,071,455 (-)	Ensembl

Prkd2
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624832	6,885,627 - 6,915,316 (+)	NCBI

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	2	2		4				1	1
Low	8	2	3	1	2	22	2	2	2
Below cutoff						1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021094607	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021094608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002344706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002344707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002344708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP325211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01100875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSSSCT00000032286 ⟹ ENSSSCP00000020857

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	52,559,393 - 52,599,132 (-)	Ensembl

RefSeq Acc Id:

XM_021094607 ⟹ XP_020950266

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,567,520 - 52,599,144 (-)	NCBI

Sequence:

show sequence

GCCGTCGCTCCGGACACTTCCTCCTGGGCCGCCGCAGCGGAGTTAAACTTTGGAGGGGGAAAAA
GAGCCCTGGGCGCCCGGCCACCTTCCTTTGCCCCACCCCCACCCCGCCACCCCACTGCCGCCGG
TAACACCCCCTTCTCCGCGGTCCCGACCGAATTTTTCTCCTACTTCCGAAACCCGTGAGATTTT
CCCACCTTAGCACCCCGGCCCTCGGAATCCCTTTGCCCATCCCCGGGCCCGCTGTCGGATCCCC
GGGATCCACTCGAATCCCGTCTCTGAGGCTCCTGCTCTCCATCCCCAAGAGCCCCGGGATCCCC
GCGGTCTAACCACCAGCTTACAAGATTCCTCGGACCCAGTGACCCGAGCCTCTCTGCCCAGGCT
CCTCCAGCCGGATCCCGGGTGGAAGACGGGCGGCTGGTCCCGGGCCTCGCCCTATGGCCGCCGC
CCCCTCCCATCCCGCTGGGCTCCCGGGCTCTCCCGGCCCAGGGTCTCCTCTGCCCTCCGGCGGC
TTGGAACTGCAGTCGCCGCCACCGCTGCTGCCCCATGTCCCGGCCCCGGGCTCCGGGGTCTCCT
TCCACATCCAGATCGGGTTGACCCGCGAGTTCGTGCTGTTGCCCACAGCCTCCGAGTTGGCCCA
TGTGAAGCAGCTGGCTTGCTCCATCGTGGACCAGAAGTTCCCCGAGTGTGGCTTCTACGGCCTT
TACGACAAGATCCTGCTCTTCAAACATGACCCCACGTCAGCCAACCTCCTGCAGTTGGTGCGCT
CGGCCGGAGACATCCAGGAGGGCGACCTGGTGGAGGTGGTGCTGTCGGCTTCCGCCACCTTCGA
GGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCACTCCTACCGAGCGCCTGCCTTCTGCGAC
CACTGCGGGGAGATGCTCTTCGGCCTGGTGCGCCAGGGCCTCAAGTGTGATGGTTGTGGACTGA
ACTACCACAAGCGCTGCGCCTTCAGCATCCCCAACAACTGCAGTGGGGCCCGCAAGCGACGCCT
GTCATCCACGTCTCTGGCCAGTGGCCATTCGGTGCGCCTCGGCACCTCTGAGTCCCTGCCCTGC
ATGGCTGATGAGCTGAGCCGAAGCACCACTGAGCTCATCCCTCGCCGCCCCCCCTCATCCTCCT
CTTCATCGTCTGCCTCCTCCTACACCGGTCGCCCCATCGAGCTGGACAAGATGCTGCTCTCCAA
GGTGAAGGTGCCACACACCTTCCTCATCCACAGCTACACGCGGCCCACGGTCTGCCAGGCTTGC
AAGAAACTCCTTAAGGGCCTCTTTCGCCAAGGCCTACAGTGCAAAGATTGCAAGTTCAACTGTC
ACAAACGCTGCGCCACCCGCGTCCCCAATGACTGCCTGGGGGAGGCGCTCATCAATGGAGATGT
GCCGATGGAGGAGGCCACCGATTTCAGCGAGGCCGACAAAAGCTCCCTCACAGATGAATCGGAC
GACTCCGGTTTCGTCCCGGGCTCTCACTCGGAAAATGTTCTCCACGCCAGTGAGGAGGAGGAAG
GCGAGGGAGGCAAGGCCCAGAGTTCCCTGGGGTACATCCCCCTAATGAGAGTGGTGCAGTCAGT
GCGACACACGACACGGAAATCGAGCACGACACTGCGTGAGGGTTGGGTGGTTCATTACAGCAAC
AAGGACACACTGAGGAAGCGGCACTATTGGCGCCTGGACTGCAAGTGCATCACGCTTTTCCAGA
ACAACACAACCAACAGATACTACAAGGAAATTCCACTGTCTGAAATCCTCACCGTGGAGCCTGC
CCAGAACTTCAGCCTTGTGCCACCAGGCACCAATCCACACTGCTTCGAGATTGTCACTGCCAAC
GCCACCTACTTTGTGGGCGAAACCCCTGGTGGGGCCCCAGGAGGGCCCAGCGGGCAGGGGGCTG
AGGCCGCCCGGGGTTGGGAAACGGCCATCCGCCAGGCCCTGATGCCCGTCATCCTCCAGGATGC
ACCCAGCGCCCCAGGCCATGCGCCCCACAGACAAGCTTCTCTGAGCATCTCAGTGTCTAACAGC
CAGATCCAAGAGAATGTGGACATTGCCACTGTCTACCAGATCTTCCCCGATGAGGTGCTGGGCT
CAGGCCAGTTCGGAGTGGTCTATGGCGGAAAGCACCGGAAGACGGGCCGGGACGTGGCGGTAAA
AGTCATTGACAAACTGCGTTTCCCCACCAAGCAGGAGAGCCAGCTCCGGAATGAAGTGGCCATT
CTGCAGAGTCTGCGGCACCCGGGGATCGTCAACCTGGAGTGTATGTTCGAGACGCCGGAGAAGG
TGTTTGTGGTGATGGAGAAGCTGCACGGGGACATGTTGGAGATGATCCTTTCCAGCGAGAAGGG
CCGGTTGCCCGAGCGCCTCACCAAGTTCCTCATCACCCAGATCCTGGTGGCTTTGAGACACCTT
CACTTCAAGAATATCGTCCACTGTGACTTGAAACCGGAAAACGTGTTGTTGGCGTCAGCGGACC
CATTTCCTCAGGTTAGACATGTCCCCTCCTGGTTTGGGAAAGGTCATCCAATACTGGTGGTGGG
TGGGGACTGTATTAATCAAGATAATGAATCAGACACAGAAACCCAAGATAGTGATGGCTTAAAT
CAGATGGAGGCTGGTTTCTCACGTAGGGTCCAGCATAAGCATTTTGAGGGTGGAAAAGCAGTTC
CATGGAGTTGCCACCACAGCTCCTGCGGGCTTGTGTCTTGGTCTTGATTGTCCAAGACCACCCC
TCTTCCTCTTGTGAAAAGATACATAATAGTAGGGGGAGAGAGGAAAGAAACAGGGTAGAGGAAA
TGGACACACCCCTTTCCTTCCTTGGGTGCCAAATACTTCTTACATCTCATTGGCTAAGGCTTGA
TCACGTGGTCATGGCTGGCTGCGGGGTGGGGGTGGGGGGTCCGTGCTGGGAAATGTAGTTTTCA
TTCTGCCTGGCCATGTAGCTCCTTAAATTGAGGGGTTTTATTAAGGTGAGAAGTGGAGAATAGG
GTTGGGGCGGGGAAGGGGGGGGACTGGTAATTTCTTCTGTGTGTCTCTTAAGAAAACAGTCGTT
TTGGGATTTTTTTGGTCTTTTTGTCTTTTCTAGGGCCGCTTCCCACAGCATATGGAGGTTCCCA
GGCTAGGGGTCTAATTGGAGCTATAGCCACCGGCC

hide sequence

RefSeq Acc Id:

XM_021094608 ⟹ XP_020950267

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,559,368 - 52,599,143 (-)	NCBI

Sequence:

show sequence

CCGTCGCTCCGGACACTTCCTCCTGGGCCGCCGCAGCGGAGTTAAACTTTGGAGGGGGAAAAAG
AGCCCTGGGCGCCCGGCCACCTTCCTTTGCCCCACCCCCACCCCGCCACCCCACTGCCGCCGGT
AACACCCCCTTCTCCGCGGTCCCGACCGAATTTTTCTCCTACTTCCGAAACCCGTGAGATTTTC
CCACCTTAGCACCCCGGCCCTCGGAATCCCTTTGCCCATCCCCGGGCCCGCTGTCGGATCCCCG
GGATCCACTCGAATCCCGTCTCTGAGGCTCCTGCTCTCCATCCCCAAGGTCTGGTGAATCCCTC
GGGCCCCCTTAGATGAGTCCTCTTAGAGCCACTGTGTTGGCTTCCCCTGCTCCCTTTCCAGTTT
CTTCTCTCCCCATGGCTCCTTTAGATCCTGAGCTCTTCTGCTCCCCATGACCCCGACCTGCTAG
ATTTTCTTCTTTGGTTTCTTGGATTCCCCTGGTCGCTGGGTACCCCCAAACCATTAGCTTTCTA
CTGTCTGATCGTCTGTGATCCCTTGATTCTCGGGCGGGCATCTGATCCACTAGATAGCTTTTCT
CTATCTCCCAGGGTCTCACCATCCTCCAGTCCCCTCAACCTGCCAGGTTTCTCTTCTCAGAGCC
CCGGGATCCCCGCGGTCTAACCACCAGCTTACAAGATTCCTCGGACCCAGTGACCCGAGCCTCT
CTGCCCAGGCTCCTCCAGCCGGATCCCGGGTGGAAGACGGGCGGCTGGTCCCGGGCCTCGCCCT
ATGGCCGCCGCCCCCTCCCATCCCGCTGGGCTCCCGGGCTCTCCCGGCCCAGGGTCTCCTCTGC
CCTCCGGCGGCTTGGAACTGCAGTCGCCGCCACCGCTGCTGCCCCATGTCCCGGCCCCGGGCTC
CGGGGTCTCCTTCCACATCCAGATCGGGTTGACCCGCGAGTTCGTGCTGTTGCCCACAGCCTCC
GAGTTGGCCCATGTGAAGCAGCTGGCTTGCTCCATCGTGGACCAGAAGTTCCCCGAGTGTGGCT
TCTACGGCCTTTACGACAAGATCCTGCTCTTCAAACATGACCCCACGTCAGCCAACCTCCTGCA
GTTGGTGCGCTCGGCCGGAGACATCCAGGAGGGCGACCTGGTGGAGGTGGTGCTGTCGGCTTCC
GCCACCTTCGAGGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCACTCCTACCGAGCGCCTG
CCTTCTGCGACCACTGCGGGGAGATGCTCTTCGGCCTGGTGCGCCAGGGCCTCAAGTGTGATGG
TTGTGGACTGAACTACCACAAGCGCTGCGCCTTCAGCATCCCCAACAACTGCAGTGGGGCCCGC
AAGCGACGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCGGTGCGCCTCGGCACCTCTGAGT
CCCTGCCCTGCATGGCTGATGAGCTGAGCCGAAGCACCACTGAGCTCATCCCTCGCCGCCCCCC
CTCATCCTCCTCTTCATCGTCTGCCTCCTCCTACACCGGTCGCCCCATCGAGCTGGACAAGATG
CTGCTCTCCAAGGTGAAGGTGCCACACACCTTCCTCATCCACAGCTACACGCGGCCCACGGTCT
GCCAGGCTTGCAAGAAACTCCTTAAGGGCCTCTTTCGCCAAGGCCTACAGTGCAAAGATTGCAA
GTTCAACTGTCACAAACGCTGCGCCACCCGCGTCCCCAATGACTGCCTGGGGGAGGCGCTCATC
AATGGAGATGTGCCGATGGAGGAGGCCACCGATTTCAGCGAGGCCGACAAAAGCTCCCTCACAG
ATGAATCGGACGACTCCGGTTTCGTCCCGGGCTCTCACTCGGAAAATGTTCTCCACGCCAGTGA
GGAGGAGGAAGGCGAGGGAGGCAAGGCCCAGAGTTCCCTGGGGTACATCCCCCTAATGAGAGTG
GTGCAGTCAGTGCGACACACGACACGGAAATCGAGCACGACACTGCGTGAGGGTTGGGTGGTTC
ATTACAGCAACAAGGACACACTGAGGAAGCGGCACTATTGGCGCCTGGACTGCAAGTGCATCAC
GCTTTTCCAGAACAACACAACCAACAGATACTACAAGGAAATTCCACTGTCTGAAATCCTCACC
GTGGAGCCTGCCCAGAACTTCAGCCTTGTGCCACCAGGCACCAATCCACACTGCTTCGAGATTG
TCACTGCCAACGCCACCTACTTTGTGGGCGAAACCCCTGGTGGGGCCCCAGGAGGGCCCAGCGG
GCAGGGGGCTGAGGCCGCCCGGGGTTGGGAAACGGCCATCCGCCAGGCCCTGATGCCCGTCATC
CTCCAGGATGCACCCAGCGCCCCAGGCCATGCGCCCCACAGACAAGCTTCTCTGAGCATCTCAG
TGTCTAACAGCCAGATCCAAGAGAATGTGGACATTGCCACTGTCTACCAGATCTTCCCCGATGA
GGTGCTGGGCTCAGGCCAGTTCGGAGTGGTCTATGGCGGAAAGCACCGGAAGACGGGCCGGGAC
GTGGCGGTAAAAGTCATTGACAAACTGCGTTTCCCCACCAAGCAGGAGAGCCAGCTCCGGAATG
AAGTGGCCATTCTGCAGAGTCTGCGGCACCCGGGGATCGTCAACCTGGAGTGTATGTTCGAGAC
GCCGGAGAAGGTGTTTGTGGTGATGGAGAAGCTGCACGGGGACATGTTGGAGATGATCCTTTCC
AGCGAGAAGGGCCGGTTGCCCGAGCGCCTCACCAAGTTCCTCATCACCCAGATCCTGGTGGCTT
TGAGACACCTTCACTTCAAGAATATCGTCCACTGTGACTTGAAACCGGAAAACGTGTTGTTGGC
GTCAGCGGACCCATTTCCTCAGGTGAGAATGTGTGATTTCGGCTTCGCGCGCATCATTGGCGAG
AAGTCTTTCCGGCGCTCGGTGGTGGGCACGCCGGCCTACCTGGCGCCCGAGGTGCTGCTCAACC
AGGGCTACAACCGCTCACTGGACATGTGGTCGGTGGGCGTGATCATGTACGTCAGCCTCAGCGG
CACGTTCCCCTTCAACGAGGACGAGGACATCAATGACCAGATCCAGAACGCAGCCTTCATGTAC
CCAGCCTGCCCTTGGAGCCGCATCTCTGCTGGAGCCATCGACCTCATCAACAACCTGCTGCAGG
TGAAGATGCGCAAGCGCTACAGCGTGGACAAGTCTCTCAGTCACCCGTGGTTACAGGAGTACCA
GACCTGGCTGGACCTCCGAGAGCTAGAGGGGAAGATGGGCGAGCGGTACATCACACACGAGAGT
GACGATGCGCGCTGGGAGCAGTTCGTGGCAGAGCACCCACTGCCCGGGCCGGGGCTACCAGCCT
ATGGGGAGCTCGGTGGGACCCTCCCACCCCCGGACCATGAGATGCAGGGGCTGGCCGAGCGCAT
CAGCGTCCTCTGAGGCCTCATGCTCCCGCCCTAGCTGCCTCGTGATGCCGTCCTCCCGTCCTCA
GAGAGAGCGGCCCTCCATGCTATCCCAGCGATGAACTGTTCTAGCGGAAGCAGCTTCCTGCCCA
AACTGGATGGGACACGCCCTGGGGGAGGGGCATGGCGGGGGTGGGAGCGGGGGCCGGGGTTTTT
ACCAAAGCTAATTTCCCAACAATTAAAACGGACTCATCTCTGGCCCTATGGCCTTGGTTTCTGG
CCA

hide sequence

RefSeq Acc Id:

XR_002344706

RefSeq Status:

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,559,368 - 52,599,174 (-)	NCBI

Sequence:

show sequence

CATCGAACCCAGCGCCGGTTGGCCAACTGCGCCGTCGCTCCGGACACTTCCTCCTGGGCCGCCG
CAGCGGAGTTAAACTTTGGAGGGGGAAAAAGAGCCCTGGGCGCCCGGCCACCTTCCTTTGCCCC
ACCCCCACCCCGCCACCCCACTGCCGCCGGTAACACCCCCTTCTCCGCGGTCCCGACCGAATTT
TTCTCCTACTTCCGAAACCCGTGAGATTTTCCCACCTTAGCACCCCGGCCCTCGGAATCCCTTT
GCCCATCCCCGGGCCCGCTGTCGGATCCCCGGGATCCACTCGAATCCCGTCTCTGAGGCTCCTG
CTCTCCATCCCCAAGGTCTGGTGAATCCCTCGGGCCCCCTTAGATGAGTCCTCTTAGAGCCACT
GTGTTGGCTTCCCCTGCTCCCTTTCCAGTTTCTTCTCTCCCCATGGCTCCTTTAGATCCTGAGC
TCTTCTGCTCCCCATGACCCCGACCTGCTAGATTTTCTTCTTTGGTTTCTTGGATTCCCCTGGT
CGCTGGGTACCCCCAAACCATTAGCTTTCTACTGTCTGATCGTCTGTGATCCCTTGATTCTCGG
GCGGGCATCTGATCCACTAGATAGCTTTTCTCTATCTCCCAGGGTCTCACCATCCTCCAGTCCC
CTCAACCTGCCAGGTTTCTCTTCTCAGAGCCCCGGGATCCCCGCGGTCTAACCACCAGCTTACA
AGATTCCTCGGACCCAGTGACCCGAGCCTCTCTGCCCAGGCTCCTCCAGCCGGATCCCGGGTGG
AAGACGGGCGGCTGGTCCCGGGCCTCGCCCTATGGCCGCCGCCCCCTCCCATCCCGCTGGGCTC
CCGGGCTCTCCCGGCCCAGGGTCTCCTCTGCCCTCCGGCGGCTTGGAACTGCAGTCGCCGCCAC
CGCTGCTGCCCCATGTCCCGGCCCCGGGCTCCGGGGTCTCCTTCCACATCCAGATCGGGTTGAC
CCGCGAGTTCGTGCTGTTGCCCACAGCCTCCGAGTTGGCCCATGTGAAGCAGCTGGCTTGCTCC
ATCGTGGACCAGAAGTTCCCCGAGTGTGGCTTCTACGGCCTTTACGACAAGATCCTGCTCTTCA
AACATGACCCCACGTCAGCCAACCTCCTGCAGTTGGTGCGCTCGGCCGGAGACATCCAGGAGGG
CGACCTGGTGGAGGTGGTGCTGTCGGCTTCCGCCACCTTCGAGGACTTCCAGATCCGCCCGCAC
GCCCTCACGGTGCACTCCTACCGAGCGCCTGCCTTCTGCGACCACTGCGGGGAGATGCTCTTCG
GCCTGGTGCGCCAGGGCCTCAAGTGTGATGGTTGTGGACTGAACTACCACAAGCGCTGCGCCTT
CAGCATCCCCAACAACTGCAGTGGGGCCCGCAAGCGACGCCTGTCATCCACGTCTCTGGCCAGT
GGCCATTCGGTGCGCCTCGGCACCTCTGAGTCCCTGCCCTGCATGGCTGATGAGCTGAGCCGAA
GCACCACTGAGCTCATCCCTCGCCGCCCCCCCTCATCCTCCTCTTCATCGTCTGCCTCCTCCTA
CACCGGTCGCCCCATCGAGCTGGACAAGATGCTGCTCTCCAAGGTGAAGGTGCCACACACCTTC
CTCATCCACAGCTACACGCGGCCCACGGTCTGCCAGGCTTGCAAGAAACTCCTTAAGGGCCTCT
TTCGCCAAGGCCTACAGTGCAAAGATTGCAAGTTCAACTGTCACAAACGCTGCGCCACCCGCGT
CCCCAATGACTGCCTGGGGGAGGCGCTCATCAATGGAGATGTGCCGATGGAGGAGGCCACCGAT
TTCAGCGAGGCCGACAAAAGCTCCCTCACAGATGAATCGGACGACTCCGGTTTCGTCCCGGGCT
CTCACTCGGAAAATGTTCTCCACGCCAGTGAGGAGGAGGAAGGCGAGGGAGGCAAGGCCCAGAG
TTCCCTGGGGTACATCCCCCTAATGAGAGTGGTGCAGTCAGTGCGACACACGACACGGAAATCG
AGCACGACACTGCGTGAGGGTTGGGTGGTTCATTACAGCAACAAGGACACACTGAGGAAGCGGC
ACTATTGGCGCCTGGACTGCAAGTGCATCACGCTTTTCCAGAACAACACAACCAACAGATACTA
CAAGGAAATTCCACTGTCTGAAATCCTCACCGTGGAGCCTGCCCAGAACTTCAGCCTTGTGCCA
CCAGGCACCAATCCACACTGCTTCGAGATTGTCACTGCCAACGCCACCTACTTTGTGGGCGAAA
CCCCTGGTGGGGCCCCAGGAGGGCCCAGCGGGCAGGGGGCTGAGGCCGCCCGGGGTTGGGAAAC
GGCCATCCGCCAGGCCCTGATGCCCGTCATCCTCCAGGATGCACCCAGCGCCCCAGGCCATGCG
CCCCACAGACAAGCTTCTCTGAGCATCTCAGTGTCTAACAGCCAGATCCAAGAGAATGTGGACA
TTGCCACTGTCTACCAGATCTTCCCCGATGAGGTGCTGGGCTCAGGCCAGTTCGGAGTGGTCTA
TGGCGGAAAGCACCGGAAGACGGGCCGGGACGTGGCGGTAAAAGTCATTGACAAACTGCGTTTC
CCCACCAAGCAGGAGAGCCAGCTCCGGAATGAAGTGGCCATTCTGCAGAGTCTGCGGCACCCGG
GGATCGTCAACCTGGAGTGTATGTTCGAGACGCCGGAGAAGGTGTTTGTGGTGATGGAGAAGCT
GCACGGGGACATGTTGGAGATGATCCTTTCCAGCGAGAAGGGCCGGTTGCCCGAGCGCCTCACC
AAGTTCCTCATCACCCAGATCCTGGTGGCTTTGAGACACCTTCACTTCAAGAATATCGTCCACT
GTGACTTGAAACCGGAAAACGTGTTGTTGGCGTCAGCGGACCCATTTCCTCAGGTGAAGTGTGT
GATTTCGGCTTCGCGCGCATCATTGGCGAGAAGTCTTTCCGGCGCTCGGTGGTGGGCACGCCGG
CCTACCTGGCGCCCGAGGTGCTGCTCAACCAGGGCTACAACCGCTCACTGGACATGTGGTCGGT
GGGCGTGATCATGTACGTCAGCCTCAGCGGCACGTTCCCCTTCAACGAGGACGAGGACATCAAT
GACCAGATCCAGAACGCAGCCTTCATGTACCCAGCCTGCCCTTGGAGCCGCATCTCTGCTGGAG
CCATCGACCTCATCAACAACCTGCTGCAGGTGAAGATGCGCAAGCGCTACAGCGTGGACAAGTC
TCTCAGTCACCCGTGGTTACAGGAGTACCAGACCTGGCTGGACCTCCGAGAGCTAGAGGGGAAG
ATGGGCGAGCGGTACATCACACACGAGAGTGACGATGCGCGCTGGGAGCAGTTCGTGGCAGAGC
ACCCACTGCCCGGGCCGGGGCTACCAGCCTATGGGGAGCTCGGTGGGACCCTCCCACCCCCGGA
CCATGAGATGCAGGGGCTGGCCGAGCGCATCAGCGTCCTCTGAGGCCTCATGCTCCCGCCCTAG
CTGCCTCGTGATGCCGTCCTCCCGTCCTCAGAGAGAGCGGCCCTCCATGCTATCCCAGCGATGA
ACTGTTCTAGCGGAAGCAGCTTCCTGCCCAAACTGGATGGGACACGCCCTGGGGGAGGGGCATG
GCGGGGGTGGGAGCGGGGGCCGGGGTTTTTACCAAAGCTAATTTCCCAACAATTAAAACGGACT
CATCTCTGGCCCTATGGCCTTGGTTTCTGGCCA

hide sequence

RefSeq Acc Id:

XR_002344707

RefSeq Status:

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,559,368 - 52,599,142 (-)	NCBI

Sequence:

show sequence

CGTCGCTCCGGACACTTCCTCCTGGGCCGCCGCAGCGGAGTTAAACTTTGGAGGGGGAAAAAGA
GCCCTGGGCGCCCGGCCACCTTCCTTTGCCCCACCCCCACCCCGCCACCCCACTGCCGCCGGTA
ACACCCCCTTCTCCGCGGTCCCGACCGAATTTTTCTCCTACTTCCGAAACCCGTGAGATTTTCC
CACCTTAGCACCCCGGCCCTCGGAATCCCTTTGCCCATCCCCGGGCCCGCTGTCGGATCCCCGG
GATCCACTCGAATCCCGTCTCTGAGGCTCCTGCTCTCCATCCCCAAGAGCCCCGGGATCCCCGC
GGTCTAACCACCAGCTTACAAGATTCCTCGGACCCAGTGACCCGAGCCTCTCTGCCCAGGCTCC
TCCAGCCGGATCCCGGGTGGAAGACGGGCGGCTGGTCCCGGGCCTCGCCCTATGGCCGCCGCCC
CCTCCCATCCCGCTGGGCTCCCGGGCTCTCCCGGCCCAGGGTCTCCTCTGCCCTCCGGCGGCTT
GGAACTGCAGTCGCCGCCACCGCTGCTGCCCCATGTCCCGGCCCCGGGCTCCGGGGTCTCCTTC
CACATCCAGATCGGGTTGACCCGCGAGTTCGTGCTGTTGCCCACAGCCTCCGAGTTGGCCCATG
TGAAGCAGCTGGCTTGCTCCATCGTGGACCAGAAGTTCCCCGAGTGTGGCTTCTACGGCCTTTA
CGACAAGATCCTGCTCTTCAAACATGACCCCACGTCAGCCAACCTCCTGCAGTTGGTGCGCTCG
GCCGGAGACATCCAGGAGGGCGACCTGGTGGAGGTGGTGCTGTCGGCTTCCGCCACCTTCGAGG
ACTTCCAGATCCGCCCGCACGCCCTCACGGTGCACTCCTACCGAGCGCCTGCCTTCTGCGACCA
CTGCGGGGAGATGCTCTTCGGCCTGGTGCGCCAGGGCCTCAAGTGTGATGGTTGTGGACTGAAC
TACCACAAGCGCTGCGCCTTCAGCATCCCCAACAACTGCAGTGGGGCCCGCAAGCGACGCCTGT
CATCCACGTCTCTGGCCAGTGGCCATTCGGTGCGCCTCGGCACCTCTGAGTCCCTGCCCTGCAT
GGCTGATGAGCTGAGCCGAAGCACCACTGAGCTCATCCCTCGCCGCCCCCCCTCATCCTCCTCT
TCATCGTCTGCCTCCTCCTACACCGGTCGCCCCATCGAGCTGGACAAGATGCTGCTCTCCAAGG
TGAAGGTGCCACACACCTTCCTCATCCACAGCTACACGCGGCCCACGGTCTGCCAGGCTTGCAA
GAAACTCCTTAAGGGCCTCTTTCGCCAAGGCCTACAGTGCAAAGATTGCAAGTTCAACTGTCAC
AAACGCTGCGCCACCCGCGTCCCCAATGACTGCCTGGGGGAGGCGCTCATCAATGGAGATGTGC
CGATGGAGGAGGCCACCGATTTCAGCGAGGCCGACAAAAGCTCCCTCACAGATGAATCGGACGA
CTCCGGTTTCGTCCCGGGCTCTCACTCGGAAAATGTTCTCCACGCCAGTGAGGAGGAGGAAGGC
GAGGGAGGCAAGGCCCAGAGTTCCCTGGGGTACATCCCCCTAATGAGAGTGGTGCAGTCAGTGC
GACACACGACACGGAAATCGAGCACGACACTGCGTGAGGGTTGGGTGGTTCATTACAGCAACAA
GGACACACTGAGGAAGCGGCACTATTGGCGCCTGGACTGCAAGTGCATCACGCTTTTCCAGAAC
AACACAACCAACAGATACTACAAGGAAATTCCACTGTCTGAAATCCTCACCGTGGAGCCTGCCC
AGAACTTCAGCCTTGTGCCACCAGGCACCAATCCACACTGCTTCGAGATTGTCACTGCCAACGC
CACCTACTTTGTGGGCGAAACCCCTGGTGGGGCCCCAGGAGGGCCCAGCGGGCAGGGGGCTGAG
GCCGCCCGGGGTTGGGAAACGGCCATCCGCCAGGCCCTGATGCCCGTCATCCTCCAGGATGCAC
CCAGCGCCCCAGGCCATGCGCCCCACAGACAAGCTTCTCTGAGCATCTCAGTGTCTAACAGCCA
GATCCAAGAGAATGTGGACATTGCCACTGTCTACCAGATCTTCCCCGATGAGGTGCTGGGCTCA
GGCCAGTTCGGAGTGGTCTATGGCGGAAAGCACCGGAAGACGGGCCGGGACGTGGCGGTAAAAG
TCATTGACAAACTGCGTTTCCCCACCAAGCAGGAGAGCCAGCTCCGGAATGAAGTGGCCATTCT
GCAGAGTCTGCGGCACCCGGGGATCGTCAACCTGGAGTGTATGTTCGAGACGCCGGAGAAGGTG
TTTGTGGTGATGGAGAAGCTGCACGGGGACATGTTGGAGATGATCCTTTCCAGCGAGAAGGGCC
GGTTGCCCGAGCGCCTCACCAAGTTCCTCATCACCCAGATCCTGGTGGCTTTGAGACACCTTCA
CTTCAAGAATATCGTCCACTGTGACTTGAAACCGGAAAACGTGTTGTTGGCGTCAGCGGACCCA
TTTCCTCAGGTGAAGTGTGTGATTTCGGCTTCGCGCGCATCATTGGCGAGAAGTCTTTCCGGCG
CTCGGTGGTGGGCACGCCGGCCTACCTGGCGCCCGAGGTGCTGCTCAACCAGGGCTACAACCGC
TCACTGGACATGTGGTCGGTGGGCGTGATCATGTACGTCAGCCTCAGCGGCACGTTCCCCTTCA
ACGAGGACGAGGACATCAATGACCAGATCCAGAACGCAGCCTTCATGTACCCAGCCTGCCCTTG
GAGCCGCATCTCTGCTGGAGCCATCGACCTCATCAACAACCTGCTGCAGGTGAAGATGCGCAAG
CGCTACAGCGTGGACAAGTCTCTCAGTCACCCGTGGTTACAGGAGTACCAGACCTGGCTGGACC
TCCGAGAGCTAGAGGGGAAGATGGGCGAGCGGTACATCACACACGAGAGTGACGATGCGCGCTG
GGAGCAGTTCGTGGCAGAGCACCCACTGCCCGGGCCGGGGCTACCAGCCTATGGGGAGCTCGGT
GGGACCCTCCCACCCCCGGACCATGAGATGCAGGGGCTGGCCGAGCGCATCAGCGTCCTCTGAG
GCCTCATGCTCCCGCCCTAGCTGCCTCGTGATGCCGTCCTCCCGTCCTCAGAGAGAGCGGCCCT
CCATGCTATCCCAGCGATGAACTGTTCTAGCGGAAGCAGCTTCCTGCCCAAACTGGATGGGACA
CGCCCTGGGGGAGGGGCATGGCGGGGGTGGGAGCGGGGGCCGGGGTTTTTACCAAAGCTAATTT
CCCAACAATTAAAACGGACTCATCTCTGGCCCTATGGCCTTGGTTTCTGGCCA

hide sequence

RefSeq Acc Id:

XR_002344708

RefSeq Status:

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,559,066 - 52,599,144 (-)	NCBI

Sequence:

show sequence

GCCGTCGCTCCGGACACTTCCTCCTGGGCCGCCGCAGCGGAGTTAAACTTTGGAGGGGGAAAAA
GAGCCCTGGGCGCCCGGCCACCTTCCTTTGCCCCACCCCCACCCCGCCACCCCACTGCCGCCGG
TAACACCCCCTTCTCCGCGGTCCCGACCGAATTTTTCTCCTACTTCCGAAACCCGTGAGATTTT
CCCACCTTAGCACCCCGGCCCTCGGAATCCCTTTGCCCATCCCCGGGCCCGCTGTCGGATCCCC
GGGATCCACTCGAATCCCGTCTCTGAGGCTCCTGCTCTCCATCCCCAAGGTCTGGTGAATCCCT
CGGGCCCCCTTAGATGAGTCCTCTTAGAGCCACTGTGTTGGCTTCCCCTGCTCCCTTTCCAGTT
TCTTCTCTCCCCATGGCTCCTTTAGATCCTGAGCTCTTCTGCTCCCCATGACCCCGACCTGCTA
GATTTTCTTCTTTGGTTTCTTGGATTCCCCTGGTCGCTGGGTACCCCCAAACCATTAGCTTTCT
ACTGTCTGATCGTCTGTGATCCCTTGATTCTCGGGCGGGCATCTGATCCACTAGATAGCTTTTC
TCTATCTCCCAGGGTCTCACCATCCTCCAGTCCCCTCAACCTGCCAGGTTTCTCTTCTCAGAGC
CCCGGGATCCCCGCGGTCTAACCACCAGCTTACAAGATTCCTCGGACCCAGTGACCCGAGCCTC
TCTGCCCAGGCTCCTCCAGCCGGATCCCGGGTGGAAGACGGGCGGCTGGTCCCGGGCCTCGCCC
TATGGCCGCCGCCCCCTCCCATCCCGCTGGGCTCCCGGGCTCTCCCGGCCCAGGGTCTCCTCTG
CCCTCCGGCGGCTTGGAACTGCAGTCGCCGCCACCGCTGCTGCCCCATGTCCCGGCCCCGGGCT
CCGGGGTCTCCTTCCACATCCAGATCGGGTTGACCCGCGAGTTCGTGCTGTTGCCCACAGCCTC
CGAGTTGGCCCATGTGAAGCAGCTGGCTTGCTCCATCGTGGACCAGAAGTTCCCCGAGTGTGGC
TTCTACGGCCTTTACGACAAGATCCTGCTCTTCAAACATGACCCCACGTCAGCCAACCTCCTGC
AGTTGGTGCGCTCGGCCGGAGACATCCAGGAGGGCGACCTGGTGGAGGTGGTGCTGTCGGCTTC
CGCCACCTTCGAGGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCACTCCTACCGAGCGCCT
GCCTTCTGCGACCACTGCGGGGAGATGCTCTTCGGCCTGGTGCGCCAGGGCCTCAAGTGTGATG
GTTGTGGACTGAACTACCACAAGCGCTGCGCCTTCAGCATCCCCAACAACTGCAGTGGGGCCCG
CAAGCGACGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCGGTGCGCCTCGGCACCTCTGAG
TCCCTGCCCTGCATGGCTGATGAGCTGAGCCGAAGCACCACTGAGCTCATCCCTCGCCGCCCCC
CCTCATCCTCCTCTTCATCGTCTGCCTCCTCCTACACCGGTCGCCCCATCGAGCTGGACAAGAT
GCTGCTCTCCAAGGTGAAGGTGCCACACACCTTCCTCATCCACAGCTACACGCGGCCCACGGTC
TGCCAGGCTTGCAAGAAACTCCTTAAGGGCCTCTTTCGCCAAGGCCTACAGTGCAAAGATTGCA
AGTTCAACTGTCACAAACGCTGCGCCACCCGCGTCCCCAATGACTGCCTGGGGGAGGCGCTCAT
CAATGGAGATGTGCCGATGGAGGAGGCCACCGATTTCAGCGAGGCCGACAAAAGCTCCCTCACA
GATGAATCGGACGACTCCGGTTTCGTCCCGGGCTCTCACTCGGAAAATGTTCTCCACGCCAGTG
AGGAGGAGGAAGGCGAGGGAGGCAAGGCCCAGAGTTCCCTGGGGTACATCCCCCTAATGAGAGT
GGTGCAGTCAGTGCGACACACGACACGGAAATCGAGCACGACACTGCGTGAGGGTTGGGTGGTT
CATTACAGCAACAAGGACACACTGAGGAAGCGGCACTATTGGCGCCTGGACTGCAAGTGCATCA
CGCTTTTCCAGAACAACACAACCAACAGATACTACAAGGAAATTCCACTGTCTGAAATCCTCAC
CGTGGAGCCTGCCCAGAACTTCAGCCTTGTGCCACCAGGCACCAATCCACACTGCTTCGAGATT
GTCACTGCCAACGCCACCTACTTTGTGGGCGAAACCCCTGGTGGGGCCCCAGGAGGGCCCAGCG
GGCAGGGGGCTGAGGCCGCCCGGGGTTGGGAAACGGCCATCCGCCAGGCCCTGATGCCCGTCAT
CCTCCAGGATGCACCCAGCGCCCCAGGCCATGCGCCCCACAGACAAGCTTCTCTGAGCATCTCA
GTGTCTAACAGCCAGATCCAAGAGAATGTGGACATTGCCACTGTCTACCAGATCTTCCCCGATG
AGGTGCTGGGCTCAGGCCAGTTCGGAGTGGTCTATGGCGGAAAGCACCGGAAGACGGGCCGGGA
CGTGGCGGTAAAAGTCATTGACAAACTGCGTTTCCCCACCAAGCAGGAGAGCCAGCTCCGGAAT
GAAGTGGCCATTCTGCAGAGTCTGCGGCACCCGGGGATCGTCAACCTGGAGTGTATGTTCGAGA
CGCCGGAGAAGGTGTTTGTGGTGATGGAGAAGCTGCACGGGGACATGTTGGAGATGATCCTTTC
CAGCGAGAAGGGCCGGTTGCCCGAGCGCCTCACCAAGTTCCTCATCACCCAGGTGCGCCCGCCC
CGCCCCCTGCCCCGCCCCGCCCACTGCTCCATTCCCCGCCCACTTCAGCTTCCCCGCCCAGGCT
CCCACCTGCCCTGCAAGAGGCCCCGGATGGAAGGCAAACGACCCAGAGTGGGAGTCATAATAGT
GGATGATAGGAAATGTAATAATAGGGTAATAATAAAAGCAGTCATAGAAAAAAATTAGAATGAT
AATTTTTAAATAGAGTAATAATGGAACAATTAATAGAGTAATAATAATAGATGAATAACAATAG
AAACATCCCGGAATAATAAGCAAAAAAATAATAAAGTGATAACTATTATTATTATTAAAAAATA
AACGCTTATTTTATATATATTTTTTACTTTATATAATGAGTCAGGCTCCCTAGGCCTGGCTTTA
TTCATGCAGAAAAAATGGAAGAGGAGAAAGGCCTTTCTCTGGGGAGCTCATTCATTCATTTATT
TATTAGATTGCTCAATAAGCACTGCCTGAGCCCCTGCTCTGTGCCCGGCCCCATGCAGTGTGAG
GACACAGCAGTGACCAAGACAGCCTGGCTCTGGACAGTGATCACTGAGAGTGGGTTGCTGATAA
TGATGAAGATAAATAATATGGTCCCTGACTTTGCTGAGCACTTAGTGTATGCCAGGTCCTATTT
TGGTTCATTTAATCTTCATAGCAACCGATGTGGTAGTAGCACAATTACTCCCGTTGTCCTGAGG
CTCAGAGACTTTAAGTAACTGACCCAGGGTCACACAGCTGATGCGATTTGAATCTAGAAGCTGT
GCTTTTAACTAGTAACGTCAAACTAATTTGTGTTATCCGTGTGTGTGTGTGTGTGTGCATGCAC
TTTAGTTGGTTTCGCATCACAAGTCACACTATGTTGTTCTGCTTCTTACTTTCCTCACTTTAAT
AGGGCTTCTGGAAGACTGTTCTATTTTAGTACATAGTTAGCAGAACTGCCTCTTTTTCTTAATT
GCACCCCATGATGAATATCACCAAATTCCCCAGGTGCTGAGTATGTAGATTGGTTTCACTATTC
CATTCCTACAAAAAACATCCTGTGAACATTCATCCACAAACATCAGCGGGCTCTGGTGGGAGAA
TTTCAGTAGAACATGTTTCAAATAGTAGACTCCTGAGTCCAGGGAAATGCGCTTTAAATTTTTA
AAAAGGACGTTACCCAGTTGCTGTCTAAAGCCTCTTTCAATCTTTGTTTTCACCAACAGAGTTT
GAGGTTGTCTGTTTTCTCACTCCCTACCAACTCTGGGTAATATTATCATCAGTCTTAAAGGTGG
TAAGATAATACTTCATGTGGCTTCCTTTGTTGGTTTAAAAATTACGGGTGAGGTTGAGCATATT
TCACATATTTATTGGACTGTGCTTTATATACTCTTTGTCCATTTTTCAGCTGGATAATTCTTTT
TTTTTCTTTTTTTTTTCTTTTTGCCATTTCTCAAGCCGCTCCCACGGCATATGGAGGTTCCCAG
GCTAATCGGAGCTGTAGCCACCGGCCTACGCCAGAGCCACAGCAACGTGGCAGGATCCAAGCCA
CGTCTGCAACCCACACCACAGCTCACGGCAACACCGGATCCTTAACCCACTGAGCAAGGCCAGG
GATTAAACCTGCAACCTTATGGTTCCTAGTCAGATTTGTTAACCACTGAGCCACAACGGGAACT
CCTCAGTTGGATAATTCTTATTGAATTGTAAGAGCTCTTTGTTTATGAAGGACACTGGCTCCTC
ATTGCTTGTATTGTTCCCGGCTTTTATCCCAGTATTTGTTTTCCTCTTCATTTTCTTCAGGGCG
TTTTCTGGGTTCCATAGCCTTCCTAGGAAGAGCTTTCTACCTGACTGGTACCACACCTGATTCT
GGGACATGTACTCTGTTGGTTATGAAGTCCCCTGTGCTGGCTTCCTTCTTCCAGGCCCAGCACC
TTGGCTCTCCCAAGCCTTTGTCAGGGTGGTGTGCGGGTGGGGACAGAAACCCACTGAGGCAGGC
TCATCCAGACTTCAGATGGGGAAAGAAAACCAAGGTGGTTTCTCTTTCTTTCTGGTCTTTTCTC
TCTTCCTCTCTTTTTGCACGTGCTCTTCTCTCTCTCTTTCTCTCTGCAGATTTCTGCTTTCTGC
CTCTTGCCTGCCCCACTCCAAGTCCTGTGCTAAACCCTTTACCTCATGAATTTGCCTAGGCCTC
ACAACCACCTTTGAGATCCTGGTGGCTTTGAGACACCTTCACTTCAAGAATATCGTCCACTGTG
ACTTGAAACCGGAAAACGTGTTGTTGGCGTCAGCGGACCCATTTCCTCAGGTGAAGTGTGTGAT
TTCGGCTTCGCGCGCATCATTGGCGAGAAGTCTTTCCGGCGCTCGGTGGTGGGCACGCCGGCCT
ACCTGGCGCCCGAGGTGCTGCTCAACCAGGGCTACAACCGCTCACTGGACATGTGGTCGGTGGG
CGTGATCATGTACGTCAGCCTCAGCGGCACGTTCCCCTTCAACGAGGACGAGGACATCAATGAC
CAGATCCAGAACGCAGCCTTCATGTACCCAGCCTGCCCTTGGAGCCGCATCTCTGCTGGAGCCA
TCGACCTCATCAACAACCTGCTGCAGGTGAAGATGCGCAAGCGCTACAGCGTGGACAAGTCTCT
CAGTCACCCGTGGTTACAGGAGTACCAGACCTGGCTGGACCTCCGAGAGCTAGAGGGGAAGATG
GGCGAGCGGTACATCACACACGAGAGTGACGATGCGCGCTGGGAGCAGTTCGTGGCAGAGCACC
CACTGCCCGGGCCGGGGCTACCAGCCTATGGGGAGCTCGGTGGGACCCTCCCACCCCCGGACCA
TGAGATGCAGGGGCTGGCCGAGCGCATCAGCGTCCTCTGAGGCCTCATGCTCCCGCCCTAGCTG
CCTCGTGATGCCGTCCTCCCGTCCTCAGAGAGAGCGGCCCTCCATGCTATCCCAGCGATGAACT
GTTCTAGCGGAAGCAGCTTCCTGCCCAAACTGGATGGGACACGCCCTGGGGGAGGGGCATGGCG
GGGGTGGGAGCGGGGGCCGGGGTTTTTACCAAAGCTAATTTCCCAACAATTAAAACGGACTCAT
CTCTGGCCCTATGGCCTTGGTTTCTGGCCACACCGCACTCACAATCATTAGTCGGTTGCTCACC
AAGATAGAGTTTACATGGAGAGAAGATGGGATGAAGGCGGGATGGGAGGGGGTGCCGTGCTGGA
AGAAGAGGAGTTTTGGAAGGAGGACTAACTGGGGTAAAGAACAGAAACTGCCAGGAGGGAAGAC
TAGAAAGGGGAATGGTAGGGAGGTGCATAAAGAGGGGAGAGAAGAGAAATAGAGGAGAGATGAA
AGAAATCTCATCAGAGGGGTGAAGGATTTAGAGGAAAGCAAGTCATCTCATGACTTGGTGTTTT
GTTTTTCTTCTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_020950266	(Get FASTA)	NCBI Sequence Viewer
	XP_020950267	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_020950267 ⟸ XM_021094608

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAAAPSHPAGLPGSPGPGSPLPSGGLELQSPPPLLPHVPAPGSGVSFHIQIGLTREFVLLPTAS
ELAHVKQLACSIVDQKFPECGFYGLYDKILLFKHDPTSANLLQLVRSAGDIQEGDLVEVVLSAS
ATFEDFQIRPHALTVHSYRAPAFCDHCGEMLFGLVRQGLKCDGCGLNYHKRCAFSIPNNCSGAR
KRRLSSTSLASGHSVRLGTSESLPCMADELSRSTTELIPRRPPSSSSSSSASSYTGRPIELDKM
LLSKVKVPHTFLIHSYTRPTVCQACKKLLKGLFRQGLQCKDCKFNCHKRCATRVPNDCLGEALI
NGDVPMEEATDFSEADKSSLTDESDDSGFVPGSHSENVLHASEEEEGEGGKAQSSLGYIPLMRV
VQSVRHTTRKSSTTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILT
VEPAQNFSLVPPGTNPHCFEIVTANATYFVGETPGGAPGGPSGQGAEAARGWETAIRQALMPVI
LQDAPSAPGHAPHRQASLSISVSNSQIQENVDIATVYQIFPDEVLGSGQFGVVYGGKHRKTGRD
VAVKVIDKLRFPTKQESQLRNEVAILQSLRHPGIVNLECMFETPEKVFVVMEKLHGDMLEMILS
SEKGRLPERLTKFLITQILVALRHLHFKNIVHCDLKPENVLLASADPFPQVRMCDFGFARIIGE
KSFRRSVVGTPAYLAPEVLLNQGYNRSLDMWSVGVIMYVSLSGTFPFNEDEDINDQIQNAAFMY
PACPWSRISAGAIDLINNLLQVKMRKRYSVDKSLSHPWLQEYQTWLDLRELEGKMGERYITHES
DDARWEQFVAEHPLPGPGLPAYGELGGTLPPPDHEMQGLAERISVL

hide sequence

RefSeq Acc Id:

XP_020950266 ⟸ XM_021094607

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAAAPSHPAGLPGSPGPGSPLPSGGLELQSPPPLLPHVPAPGSGVSFHIQIGLTREFVLLPTAS
ELAHVKQLACSIVDQKFPECGFYGLYDKILLFKHDPTSANLLQLVRSAGDIQEGDLVEVVLSAS
ATFEDFQIRPHALTVHSYRAPAFCDHCGEMLFGLVRQGLKCDGCGLNYHKRCAFSIPNNCSGAR
KRRLSSTSLASGHSVRLGTSESLPCMADELSRSTTELIPRRPPSSSSSSSASSYTGRPIELDKM
LLSKVKVPHTFLIHSYTRPTVCQACKKLLKGLFRQGLQCKDCKFNCHKRCATRVPNDCLGEALI
NGDVPMEEATDFSEADKSSLTDESDDSGFVPGSHSENVLHASEEEEGEGGKAQSSLGYIPLMRV
VQSVRHTTRKSSTTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILT
VEPAQNFSLVPPGTNPHCFEIVTANATYFVGETPGGAPGGPSGQGAEAARGWETAIRQALMPVI
LQDAPSAPGHAPHRQASLSISVSNSQIQENVDIATVYQIFPDEVLGSGQFGVVYGGKHRKTGRD
VAVKVIDKLRFPTKQESQLRNEVAILQSLRHPGIVNLECMFETPEKVFVVMEKLHGDMLEMILS
SEKGRLPERLTKFLITQILVALRHLHFKNIVHCDLKPENVLLASADPFPQVRHVPSWFGKGHPI
LVVGGDCINQDNESDTETQDSDGLNQMEAGFSRRVQHKHFEGGKAVPWSCHHSSCGLVSWS

hide sequence

RefSeq Acc Id:

ENSSSCP00000020857 ⟸ ENSSSCT00000032286

Protein Domains

PH Phorbol-ester/DAG-type Protein kinase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000026152	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00070028184	UniProtKB/TrEMBL
Ensembl Protein	ENSSSCP00000020857	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00070048032	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000032286	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00070056537	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
InterPro	DAG/PE-bd	UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/TrEMBL
	PE/DAG-bd	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/TrEMBL
	Protein_Kinase_C_mu-related	UniProtKB/TrEMBL
	Ser/Thr_kinase_AS	UniProtKB/TrEMBL
NCBI Gene	PRKD2	ENTREZGENE
PANTHER	PTHR22968	UniProtKB/TrEMBL
Pfam	C1_1	UniProtKB/TrEMBL
	Pkinase	UniProtKB/TrEMBL
PIRSF	PKC_mu_nu_D2	UniProtKB/TrEMBL
PRINTS	DAGPEDOMAIN	UniProtKB/TrEMBL
PROSITE	PH_DOMAIN	UniProtKB/TrEMBL
	PROTEIN_KINASE_ATP	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/TrEMBL
	ZF_DAG_PE_1	UniProtKB/TrEMBL
	ZF_DAG_PE_2	UniProtKB/TrEMBL
SMART	S_TKc	UniProtKB/TrEMBL
	SM00109	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/TrEMBL
UniProt	A0A4X1W264_PIG	UniProtKB/TrEMBL
	I3L9Z3_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:91813	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD