MYOC (myocilin) - Rat Genome Database

Name: MYOC
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: MYOC (myocilin) Sus scrofa

Analyze

Symbol:

MYOC

Name:

myocilin

RGD ID:

13905820

Description:

ENCODES a protein that exhibits fibronectin binding (inferred); frizzled binding (inferred); metal ion binding (inferred); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); nerve development (ortholog); ASSOCIATED WITH 1q24 Deletion Syndrome (ortholog); autoimmune lymphoproliferative syndrome (ortholog); Brain Injuries (ortholog); FOUND IN mesaxon (ortholog); myelin sheath abaxonal region (ortholog); Schmidt-Lanterman incisure (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYOC (myocilin)	HGNC	Ensembl, Inparanoid, NCBI, OrthoDB
Mus musculus (house mouse):	Myoc (myocilin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Myoc (myocilin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Myoc (myocilin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYOC (myocilin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYOC (myocilin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Myoc (myocilin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MYOC (myocilin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Myoc (myocilin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	114,087,378 - 114,098,745 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	114,087,370 - 114,098,765 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	125,551,261 - 125,562,662 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

1q24 Deletion Syndrome (ISO)

autoimmune lymphoproliferative syndrome (ISO)

Brain Injuries (ISO)

buphthalmos (ISO)

congestive heart failure (ISO)

Experimental Liver Cirrhosis (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

glaucoma (ISO)

Glaucoma 1, Open Angle, E (ISO)

juvenile glaucoma (ISO)

low tension glaucoma (ISO)

membranoproliferative glomerulonephritis (ISO)

ocular hypertension (ISO)

open-angle glaucoma (ISO)

parathyroid carcinoma (ISO)

primary open angle glaucoma (ISO)

severe combined immunodeficiency (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bone development (IEA)

cellular response to nerve growth factor stimulus (ISO)

clustering of voltage-gated sodium channels (IEA)

ERBB2-ERBB3 signaling pathway (IEA)

myelination in peripheral nervous system (IEA)

negative regulation of cell-matrix adhesion (IEA)

negative regulation of Rho protein signal transduction (IEA)

negative regulation of stress fiber assembly (IEA)

nerve development (ISO)

neuron projection development (IEA)

non-canonical Wnt signaling pathway (IEA)

osteoblast differentiation (IBA,IEA)

positive regulation of cell migration (IEA)

positive regulation of focal adhesion assembly (IEA)

positive regulation of JNK cascade (IEA)

positive regulation of mitochondrial depolarization (IEA)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA)

positive regulation of stress fiber assembly (IEA)

positive regulation of substrate adhesion-dependent cell spreading (IEA)

regulation of MAPK cascade (IEA)

signal transduction (IBA)

skeletal muscle hypertrophy (IEA)

Cellular Component

cilium (IEA)

collagen-containing extracellular matrix (IEA)

cytoplasmic vesicle (IEA)

endoplasmic reticulum (IEA)

extracellular region (IEA)

extracellular space (IBA,IEA)

Golgi apparatus (IBA,IEA)

mesaxon (ISO)

mitochondrial inner membrane (IEA)

mitochondrial intermembrane space (IEA)

mitochondrial outer membrane (IEA)

mitochondrion (IEA)

myelin sheath abaxonal region (ISO)

node of Ranvier (IEA)

rough endoplasmic reticulum (IEA)

Schmidt-Lanterman incisure (ISO)

Molecular Function

fibronectin binding (IEA)

frizzled binding (IEA)

metal ion binding (IEA)

myosin light chain binding (IEA)

protein binding (ISO)

receptor tyrosine kinase binding (IEA)

References

Additional References at PubMed

PMID:15277488	PMID:30032202

Genomics

Comparative Map Data

MYOC
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	114,087,378 - 114,098,745 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	114,087,370 - 114,098,765 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	125,551,261 - 125,562,662 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MYOC
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	171,635,417 - 171,652,688 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	171,635,417 - 171,652,688 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	171,604,557 - 171,621,828 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	169,871,180 - 169,888,396 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	168,336,215 - 168,353,430	NCBI
Celera	1	144,713,951 - 144,731,166 (-)	NCBI		Celera
Cytogenetic Map	1	q24.3	NCBI
HuRef	1	142,827,834 - 142,845,046 (-)	NCBI		HuRef
CHM1_1	1	173,026,640 - 173,043,840 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	170,991,882 - 171,009,153 (-)	NCBI		T2T-CHM13v2.0

Myoc
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	162,466,719 - 162,477,263 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	162,466,724 - 162,477,262 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	162,639,150 - 162,649,694 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	162,639,155 - 162,649,693 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	164,569,281 - 164,579,825 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	164,475,844 - 164,486,368 (+)	NCBI		MGSCv36	mm8
Celera	1	165,085,895 - 165,096,434 (+)	NCBI		Celera
Cytogenetic Map	1	H2.1	NCBI
cM Map	1	70.29	NCBI

Myoc
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	77,509,963 - 77,520,361 (+)	NCBI		GRCr8
mRatBN7.2	13	74,976,730 - 74,987,128 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	74,976,730 - 74,987,127 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	77,554,373 - 77,564,765 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	78,858,850 - 78,869,297 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	76,118,721 - 76,129,168 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	80,517,531 - 80,527,928 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	80,517,536 - 80,527,928 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	85,409,611 - 85,420,008 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	78,303,830 - 78,314,228 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	78,318,017 - 78,328,415 (+)	NCBI
Celera	13	74,726,592 - 74,736,986 (+)	NCBI		Celera
Cytogenetic Map	13	q22	NCBI

Myoc
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	12,182,046 - 12,199,669 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	12,182,115 - 12,194,683 (-)	NCBI	ChiLan1.0	ChiLan1.0

MYOC
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	78,104,233 - 78,121,545 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	77,778,772 - 77,797,111 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	147,128,541 - 147,146,227 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	150,841,630 - 150,858,628 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	150,841,630 - 150,858,628 (-)	Ensembl	panpan1.1		panPan2

MYOC
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	27,335,314 - 27,346,821 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	27,335,314 - 27,346,820 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	26,857,046 - 26,868,545 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	27,136,587 - 27,148,065 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	27,136,391 - 27,148,079 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	26,988,106 - 26,999,596 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	27,022,462 - 27,033,986 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	27,264,790 - 27,276,291 (+)	NCBI		UU_Cfam_GSD_1.0

Myoc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	97,697,971 - 97,710,064 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	15,544,660 - 15,556,857 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936481	15,544,733 - 15,556,813 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MYOC
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	57,458,615 - 57,475,329 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	57,459,374 - 57,475,322 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	59,088,230 - 59,104,345 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Myoc
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624771	10,065,788 - 10,080,680 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624771	10,066,170 - 10,080,257 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in MYOC
474 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
7	4	3	2	2	5	14	12	3	3	5	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_213986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013977636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF350447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU928019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01123724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000050117 ⟹ ENSSSCP00000040842

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	114,087,378 - 114,098,745 (-)	Ensembl

RefSeq Acc Id:

NM_213986 ⟹ NP_999151

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	114,087,378 - 114,098,732 (-)	NCBI

Sequence:

show sequence

CCCATCCAGACACCTCACAGCGCAGAGGAGAGTTCCAGAGGCAGCCTCACCCAGCCTCTGAACT
GAGGGCTTCTGTGCACATTGCTGCCGCTGCAGGCCCAAGATGCCAGCTGTCCAGCTGCTGCTGC
TGGCCTGTCTGGTGTGGAGTGCAGGGGCCAGGACAGCCCAGCTGTGGAAGGCCAATGACCGGAG
TGGCCAATGCCAGTACACCTTCAAGGTGGCCAGCCCCAATGAGTCCAGCTGCCCCGAGCAGGGC
CAGACCATGTCAGCCCTCCAGGACCTGCAGAGAGACAGCAGCGAACAGCGTGCAGCCCTGGAGT
CCACCAAAGCCCGGCTCAGCTCCCTGGAGGCTCTCCTTCACCGGCTGATCTTGGGCCAGGCTAC
CGGGCCCTGGGAGGCCCAGGAGGGGCTGGAGAAGGAGCTGGGTACCCTGAGGAGAGAGCGAGAA
CAGCTGGAAACTCAAAACAGGGAGCTGGAGACAACTTACAACAACCTCACCCGTGACAAGTCAG
CTCTGGAGGAGGAGAAGAGGCAACTGGAGACAGAGAATGAGGATCTGGCCAGGAGGTTGGAGAG
CAGCAGCCAGGAGTTAGCAAAGCTGAAGGTCCAGTGTCCCCAGGCTCACAGCATGTCTCAGGAT
GTGCCGTTGGGCTCCAGGGAAGTTTCTAAATGGAATGTGGAGAACTTGGACTTTCAAGAACTGA
AGTCAGAGTTAACTGAGGTTCCTGCTGCTCGAATCTTGAAGGAGAGTGTGTCTGGTCATTCCGG
CAGTGAAGAAGGAGGCAGTGGATGTGGAGAACTCGTTTGGGTAGGAGAGCCTGTCACTCTGAGA
ACAGCCGAGACAATCACTGGCAAGTACGGCGTGTGGATGAGAGACCCCAAGGCCACCTACCCCT
ATACCCAGGAGACCACGTGGAGGATCGACACAGTGGGCACGGACATCCGCCAGGTTTTTGAGTA
CGACCGCATCAGCCAGTTTGCGCAGGGCTACCCTTCCAAGGTGCACGTGCTGCCCAGGCGGCTG
GAAAGCACAGGTGCCGTGGTGTACCAGGGCAGCCTCTACTTCCAGGGCGCCAGTTCCAGAACGG
TGATCAGGTATGAGCTGAGCACCGAGACCCTGAAGGCTGAGAAGGAAATCCCTGGAGCCGGCTA
CCATGGACAGTTCCCCTACTCCTGGGGTGGCTACACTGACATCGACCTGGCAGTGGATGAGACA
GGTCTCTGGGTCATCTACAGCACGGAGGCCGCCAAAGGCGCCATTGTCCTCTCCAAACTGAACC
CAGAGAATCTGGAGCTTGAGCGAACCTGGGAGACCAACATCCGTAAGCAGTCCGTCGCCAACGC
CTTCATCATCTGTGGCACCTTGTACACCGTCAGCAGCTATTCATCACCTGAGGCTACCATCAAC
TTCGCCTACGACACAAGCACGGGCAGCAGCAAGGCCCTGACCATCCCGTTCAAGAACCGCTACG
AGTACAGCAGCATGATAGACTACAACCCCCTGGAGAAGAAGCTCTTCGCCTGGGACAACTTCAA
CATGGTCACCTATGACATCAGGCTCTCCCGGATGTGAAAAGCCACCAAGCGCTGTCAAAAAAGG
CAGAAGGGGATGATGGTCCGGGCTCCTGAGGGGAGAGCCAGCCAGCAACACCCACAGAGCTTTT
CTCTTTTCAAGCTTGCACTCACCCTGGAGAATGTGCATGGTCACCACGTCCCACTGGGTGGGAA
GAGCAAGCTGGGGTTTCCCATCATAACAGATGCTTTTCTTCTGTCAGCTTTTAAAGGGATATGT
AACCAAGATAGTTTGAGTTTTTTGGTGATTTGAGGCAAACGCATAATGAGTAATAGTTTCTTCC
TGAAAACCACAATACTGGCCCTCACTGGCTAAAGAGGATAGGTTTAGAAAAGAACTTGGGAAAA
ACAGGTTTGCCCCATGTGGAACCCAGGGCCAGCCCCTGCACTCACATGTTGCCGGGTTGCTGTG
AGCTACAATAACAGCAGCACTTTTGAAGGAAGAGAAGGGCCTCTGGCGCCAGAGCTGAACATAC
GTGTGTTTACTATGGTTGGCTTTTAATGCTTCAGGTGGAATCCAGTTGGCTATGACAGAACCTT
TGCCTCGTAAAATAAAATAATCTTACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_013977636 ⟹ XP_013833090

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	114,087,370 - 114,098,765 (-)	NCBI

Sequence:

show sequence

TCTGTGGAGCTGGGGCAGGAACCAGCAGGGCCACCCATCCAGACACCTCACAGCGCAGAGGAGA
GTTCCAGAGGCAGCCTCACCCAGCCTCTGAACTGAGGGCTTCTGTGCACATTGCTGCCGCTGCA
GGCCCAAGATGCCAGCTGTCCAGCTGCTGCTGCTGGCCTGTCTGGTGTGGAGTGCAGGGGCCAG
GACAGCCCAGCTGTGGAAGGCCAATGACCGGAGTGGCCAATGCCAGTACACCTTCAAGGTGGCC
AGCCCCAATGAGTCCAGCTGCCCCGAGCAGGGCCAGACCATGTCAGCCCTCCAGGACCTGCAGA
GAGACAGCAGCGAACAGCGTGCAGCCCTGGAGTCCACCAAAGCCCGGCTCAGCTCCCTGGAGGC
TCTCCTTCACCGGCTGATCTTGGGCCAGGCTACCGGGCCCTGGGAGGCCCAGGAGGGGCTGGAG
AAGGAGCTGGGTACCCTGAGGAGAGAGCGAGAACAGCTGGAAACTCAAAACAGGGAGCTGGAGA
CAACTTACAACAACCTCACCCGTGACAAGTCAGCTCTGGAGGAGGAGAAGAGGCAACTGGAGAC
AGAGAATGAGGATCTGGCCAGGAGGTTGGAGAGCAGCAGCCAGGAGTTAGCAAAGCTGAAGGTC
CAGTGTCCCCAGGCTCACAGCATGTCTCAGGATGTGCCGTTGGGCTCCAGGGAAGGATGTGGAG
AACTCGTTTGGGTAGGAGAGCCTGTCACTCTGAGAACAGCCGAGACAATCACTGGCAAGTACGG
CGTGTGGATGAGAGACCCCAAGGCCACCTACCCCTATACCCAGGAGACCACGTGGAGGATCGAC
ACAGTGGGCACGGACATCCGCCAGGTTTTTGAGTACGACCGCATCAGCCAGTTTGCGCAGGGCT
ACCCTTCCAAGGTGCACGTGCTGCCCAGGCGGCTGGAAAGCACAGGTGCCGTGGTGTACCAGGG
CAGCCTCTACTTCCAGGGCGCCAGTTCCAGAACGGTGATCAGGTATGAGCTGAGCACCGAGACC
CTGAAGGCTGAGAAGGAAATCCCTGGAGCCGGCTACCATGGACAGTTCCCCTACTCCTGGGGTG
GCTACACTGACATCGACCTGGCAGTGGATGAGACAGGTCTCTGGGTCATCTACAGCACGGAGGC
CGCCAAAGGCGCCATTGTCCTCTCCAAACTGAACCCAGAGAATCTGGAGCTTGAGCGAACCTGG
GAGACCAACATCCGTAAGCAGTCCGTCGCCAACGCCTTCATCATCTGTGGCACCTTGTACACCG
TCAGCAGCTATTCATCACCTGAGGCTACCATCAACTTCGCCTACGACACAAGCACGGGCAGCAG
CAAGGCCCTGACCATCCCGTTCAAGAACCGCTACGAGTACAGCAGCATGATAGACTACAACCCC
CTGGAGAAGAAGCTCTTCGCCTGGGACAACTTCAACATGGTCACCTATGACATCAGGCTCTCCC
GGATGTGAAAAGCCACCAAGCGCTGTCAAAAAAGGCAGAAGGGGATGATGGTCCGGGCTCCTGA
GGGGAGAGCCAGCCAGCAACACCCACAGAGCTTTTCTCTTTTCAAGCTTGCACTCACCCTGGAG
AATGTGCATGGTCACCACGTCCCACTGGGTGGGAAGAGCAAGCTGGGGTTTCCCATCATAACAG
ATGCTTTTCTTCTGTCAGCTTTTAAAGGGATATGTAACCAAGATAGTTTGAGTTTTTTGGTGAT
TTGAGGCAAACGCATAATGAGTAATAGTTTCTTCCTGAAAACCACAATACTGGCCCTCACTGGC
TAAAGAGGATAGGTTTAGAAAAGAACTTGGGAAAAACAGGTTTGCCCCATGTGGAACCCAGGGC
CAGCCCCTGCACTCACATGTTGCCGGGTTGCTGTGAGCTACAATAACAGCAGCACTTCTGAAGG
AAGAGAAGGGCCTCTGGCGCCAGAGCTGAACATACGTGTGTTTACTATGGTTGGCTTTTAATGC
TTCAGGTGGAATCCAGTTGGCTATGACAGAACCTTTGCCTCGTAAAATAAAATAATCTTACATA
ACGTT

hide sequence

Protein Sequences


Protein RefSeqs	NP_999151	(Get FASTA)	NCBI Sequence Viewer
	XP_013833090	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAN59763	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000040842
	ENSSSCP00000040842.1
	ENSSSCP00015017239.1
	ENSSSCP00025024515.1
	ENSSSCP00030020371.1
	ENSSSCP00035026042.1
	ENSSSCP00040044569.1
	ENSSSCP00045035071.1
	ENSSSCP00050039884.1
	ENSSSCP00055013564.1
	ENSSSCP00060008731.1
	ENSSSCP00065016674.1
	ENSSSCP00070028959.1

RefSeq Acc Id:	XP_013833090 ⟸ XM_013977636
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0I9C4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAVQLLLLACLVWSAGARTAQLWKANDRSGQCQYTFKVASPNESSCPEQGQTMSALQDLQRDS SEQRAALESTKARLSSLEALLHRLILGQATGPWEAQEGLEKELGTLRREREQLETQNRELETTY NNLTRDKSALEEEKRQLETENEDLARRLESSSQELAKLKVQCPQAHSMSQDVPLGSREGCGELV WVGEPVTLRTAETITGKYGVWMRDPKATYPYTQETTWRIDTVGTDIRQVFEYDRISQFAQGYPS KVHVLPRRLESTGAVVYQGSLYFQGASSRTVIRYELSTETLKAEKEIPGAGYHGQFPYSWGGYT DIDLAVDETGLWVIYSTEAAKGAIVLSKLNPENLELERTWETNIRKQSVANAFIICGTLYTVSS YSSPEATINFAYDTSTGSSKALTIPFKNRYEYSSMIDYNPLEKKLFAWDNFNMVTYDIRLSRM hide sequence

RefSeq Acc Id:	NP_999151 ⟸ NM_213986
- Peptide Label:	precursor
- UniProtKB:	Q8HZW2 (UniProtKB/TrEMBL), A0A4X1UKQ6 (UniProtKB/TrEMBL), A0A8D0I9C4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAVQLLLLACLVWSAGARTAQLWKANDRSGQCQYTFKVASPNESSCPEQGQTMSALQDLQRDS SEQRAALESTKARLSSLEALLHRLILGQATGPWEAQEGLEKELGTLRREREQLETQNRELETTY NNLTRDKSALEEEKRQLETENEDLARRLESSSQELAKLKVQCPQAHSMSQDVPLGSREVSKWNV ENLDFQELKSELTEVPAARILKESVSGHSGSEEGGSGCGELVWVGEPVTLRTAETITGKYGVWM RDPKATYPYTQETTWRIDTVGTDIRQVFEYDRISQFAQGYPSKVHVLPRRLESTGAVVYQGSLY FQGASSRTVIRYELSTETLKAEKEIPGAGYHGQFPYSWGGYTDIDLAVDETGLWVIYSTEAAKG AIVLSKLNPENLELERTWETNIRKQSVANAFIICGTLYTVSSYSSPEATINFAYDTSTGSSKAL TIPFKNRYEYSSMIDYNPLEKKLFAWDNFNMVTYDIRLSRM hide sequence

Ensembl Acc Id:

ENSSSCP00000040842 ⟸ ENSSSCT00000050117

Protein Domains

Olfactomedin-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000035066	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015032901	UniProtKB/TrEMBL
	ENSSSCG00025042708	UniProtKB/TrEMBL
	ENSSSCG00030032766	UniProtKB/TrEMBL
	ENSSSCG00035048265	UniProtKB/TrEMBL
	ENSSSCG00040072288	UniProtKB/TrEMBL
	ENSSSCG00045029505	UniProtKB/TrEMBL
	ENSSSCG00050067834	UniProtKB/TrEMBL
	ENSSSCG00055008791	UniProtKB/TrEMBL
	ENSSSCG00060015939	UniProtKB/TrEMBL
	ENSSSCG00065029186	UniProtKB/TrEMBL
	ENSSSCG00070017570	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000050117	ENTREZGENE
	ENSSSCT00000050117.3	UniProtKB/TrEMBL
	ENSSSCT00015043679.1	UniProtKB/TrEMBL
	ENSSSCT00025057932.1	UniProtKB/TrEMBL
	ENSSSCT00030045307.1	UniProtKB/TrEMBL
	ENSSSCT00035064304.1	UniProtKB/TrEMBL
	ENSSSCT00040099492.1	UniProtKB/TrEMBL
	ENSSSCT00045050385.1	UniProtKB/TrEMBL
	ENSSSCT00050092550.1	UniProtKB/TrEMBL
	ENSSSCT00055017171.1	UniProtKB/TrEMBL
	ENSSSCT00060021228.1	UniProtKB/TrEMBL
	ENSSSCT00065039395.1	UniProtKB/TrEMBL
	ENSSSCT00070034669.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.287.1490	UniProtKB/TrEMBL
	1.20.5.340	UniProtKB/TrEMBL
InterPro	Olfac-like_dom	UniProtKB/TrEMBL
	Olfactomedin-like_domain	UniProtKB/TrEMBL
KEGG Report	ssc:397046	UniProtKB/TrEMBL
NCBI Gene	MYOC	ENTREZGENE
PANTHER	OLFACTOMEDIN-RELATED	UniProtKB/TrEMBL
	PTHR23192:SF33	UniProtKB/TrEMBL
Pfam	OLF	UniProtKB/TrEMBL
PROSITE	OLF	UniProtKB/TrEMBL
SMART	OLF	UniProtKB/TrEMBL
UniProt	A0A4X1UKQ6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0I9C4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0NEH3_PIG	UniProtKB/TrEMBL
	A0A8D1IIC3_PIG	UniProtKB/TrEMBL
	A0A8D1KL03_PIG	UniProtKB/TrEMBL
	B0JF99_PIG	UniProtKB/TrEMBL
	Q8HZW2	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:90535	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM