SMAD7 (SMAD family member 7) - Rat Genome Database

Name: SMAD7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: SMAD7 (SMAD family member 7) Sus scrofa

Analyze

Symbol:

SMAD7

Name:

SMAD family member 7

RGD ID:

14252583

Description:

ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); intracellular signal transduction (ortholog); negative regulation of BMP signaling pathway (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; Bone morphogenetic proteins signaling pathway; colorectal cancer pathway; ASSOCIATED WITH atrial fibrillation (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN adherens junction (ortholog); INTERACTS WITH cadmium dichloride

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

mothers against decapentaplegic homolog 7; mothers against decapentaplegic-like protein 7; mothers against DPP 7

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SMAD7 (SMAD family member 7)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Smad7 (SMAD family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Smad7 (SMAD family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Smad7 (SMAD family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SMAD7 (SMAD family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SMAD7 (SMAD family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Smad7 (SMAD family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SMAD7 (SMAD family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Smad7 (SMAD family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	98,514,267 - 98,542,382 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	98,512,800 - 98,543,924 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	108,087,677 - 108,118,319 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atrial fibrillation (ISO)

colorectal cancer (ISO)

Colorectal Neoplasms (ISO)

endometrial cancer (ISO)

familial adenomatous polyposis 4 (ISO)

genetic disease (ISO)

hepatocellular carcinoma (ISO)

hereditary breast ovarian cancer syndrome (ISO)

Hypoglossal Nerve Injuries (ISO)

intellectual disability (ISO)

liver cirrhosis (ISO)

nephritis (ISO)

Ovarian Neoplasms (ISO)

pancreatic adenocarcinoma (ISO)

pancreatic cancer (ISO)

Paraquat Lung (ISO)

pulmonary fibrosis (ISO)

pulmonary hypertension (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

cadmium dichloride (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adherens junction assembly (IEA)

anatomical structure morphogenesis (IBA)

artery morphogenesis (IEA)

cell differentiation (IBA)

cellular response to leukemia inhibitory factor (IEA,ISO)

cellular response to transforming growth factor beta stimulus (IEA)

intracellular signal transduction (ISO)

negative regulation of BMP signaling pathway (IEA,ISO)

negative regulation of chondrocyte proliferation (IEA)

negative regulation of DNA-binding transcription factor activity (IEA)

negative regulation of DNA-templated transcription (ISO)

negative regulation of ossification (IEA)

negative regulation of pathway-restricted SMAD protein phosphorylation (IEA)

negative regulation of peptidyl-serine phosphorylation (IEA)

negative regulation of peptidyl-threonine phosphorylation (IEA)

negative regulation of protein ubiquitination (IEA)

negative regulation of T cell cytokine production (IEA)

negative regulation of T-helper 17 cell differentiation (IEA)

negative regulation of T-helper 17 type immune response (IEA)

negative regulation of transcription by competitive promoter binding (IEA)

negative regulation of transcription by RNA polymerase II (IEA)

negative regulation of transforming growth factor beta receptor signaling pathway (IEA)

negative regulation of ubiquitin-protein transferase activity (IEA)

pathway-restricted SMAD protein phosphorylation (IEA)

positive regulation of cell-cell adhesion (IEA)

positive regulation of chondrocyte hypertrophy (IEA)

positive regulation of proteasomal ubiquitin-dependent protein catabolic process (IEA)

positive regulation of protein ubiquitination (IEA)

protein stabilization (IEA)

protein-containing complex localization (IEA)

regulation of activin receptor signaling pathway (IEA)

regulation of cardiac muscle contraction (IEA)

regulation of DNA-templated transcription (IEA)

regulation of epithelial to mesenchymal transition (IEA)

regulation of transcription by RNA polymerase II (IBA)

regulation of transforming growth factor beta receptor signaling pathway (ISO)

response to laminar fluid shear stress (IEA)

SMAD protein signal transduction (IBA)

transforming growth factor beta receptor signaling pathway (IBA,IEA,ISO)

ureteric bud development (IEA)

ventricular cardiac muscle tissue morphogenesis (IEA)

ventricular septum morphogenesis (IEA)

Cellular Component

adherens junction (IEA,ISO)

centrosome (IEA)

cytoplasm (IEA)

cytosol (IEA)

fibrillar center (IEA)

heteromeric SMAD protein complex (IBA)

nucleoplasm (IEA)

nucleus (IEA)

plasma membrane (IEA)

protein-containing complex (IEA)

transcription regulator complex (IEA)

Molecular Function

activin binding (IEA)

beta-catenin binding (IEA)

collagen binding (IEA)

I-SMAD binding (IBA,IEA)

metal ion binding (IEA)

protein binding (ISO)

transcription regulator inhibitor activity (IBA,IEA)

type I transforming growth factor beta receptor binding (IEA)

ubiquitin protein ligase binding (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

altered transforming growth factor-beta Smad dependent signaling pathway (ISO)

Bone morphogenetic proteins signaling pathway (ISO)

colorectal cancer pathway (ISO)

transforming growth factor-beta Smad dependent signaling pathway (ISO)

type II interferon signaling pathway (ISO)

References

Additional References at PubMed

PMID:17407547	PMID:25448599	PMID:26902861	PMID:33217624

Genomics

Comparative Map Data

SMAD7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	98,514,267 - 98,542,382 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	98,512,800 - 98,543,924 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	108,087,677 - 108,118,319 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SMAD7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	48,919,853 - 48,950,965 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	18	48,919,853 - 48,950,965 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	46,446,223 - 46,477,335 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	44,700,221 - 44,731,079 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	44,700,221 - 44,731,079	NCBI
Celera	18	43,299,268 - 43,330,141 (-)	NCBI		Celera
Cytogenetic Map	18	q21.1	NCBI
HuRef	18	43,299,249 - 43,329,936 (-)	NCBI		HuRef
CHM1_1	18	46,441,162 - 46,472,026 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	49,115,112 - 49,146,228 (-)	NCBI		T2T-CHM13v2.0

Smad7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	75,500,436 - 75,529,006 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	75,500,600 - 75,529,006 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	75,367,365 - 75,395,935 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	75,367,529 - 75,395,935 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	75,527,019 - 75,555,588 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	75,492,894 - 75,521,292 (+)	NCBI		MGSCv36	mm8
Celera	18	76,602,062 - 76,630,688 (+)	NCBI		Celera
Cytogenetic Map	18	E3	NCBI

Smad7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	18	68,988,429 - 69,016,774 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	68,988,429 - 69,016,765 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	71,094,956 - 71,123,284 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	18	71,764,762 - 71,793,114 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	18	69,620,987 - 69,649,318 (+)	NCBI	Rnor_WKY
Rnor_6.0	18	71,395,830 - 71,424,164 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	71,395,830 - 71,424,157 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	70,530,559 - 70,558,932 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	72,294,803 - 72,323,354 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	72,368,075 - 72,396,625 (+)	NCBI
Celera	18	67,155,575 - 67,183,461 (+)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI

Smad7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	34,028,063 - 34,058,291 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	34,028,184 - 34,058,949 (-)	NCBI	ChiLan1.0	ChiLan1.0

SMAD7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	18	52,147,312 - 52,178,129 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	42,306,324 - 42,337,214 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	45,659,375 - 45,689,505 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

SMAD7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	79,706,485 - 79,734,673 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	79,706,705 - 79,734,749 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	79,113,271 - 79,142,567 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	79,776,182 - 79,805,641 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	79,776,387 - 79,805,516 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	79,490,141 - 79,519,361 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	79,520,644 - 79,548,552 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	79,805,995 - 79,834,706 (+)	NCBI		UU_Cfam_GSD_1.0

Smad7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	38,655,545 - 38,682,943 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936497	13,894,580 - 13,922,065 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936497	13,894,586 - 13,921,978 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SMAD7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	31,993,543 - 32,024,088 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	31,993,681 - 32,024,850 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	6,227,954 - 6,258,760 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Smad7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624778	12,415,282 - 12,444,835 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624778	12,415,364 - 12,444,882 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	10	4	3	5	2	23	2	3	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001244175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005659454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013992844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013992845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013992846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU062441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN101727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EW502633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EW508545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FM995265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01129206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HM803236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ322392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSSSCT00000004979 ⟹ ENSSSCP00000004862

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	1	98,514,267 - 98,542,382 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000044286 ⟹ ENSSSCP00000046968

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	1	98,510,229 - 98,542,382 (-)	Ensembl

RefSeq Acc Id:

NM_001244175 ⟹ NP_001231104

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	98,512,800 - 98,542,315 (-)	NCBI

Sequence:

show sequence

ATGTTCAGGACCAAACGATCTGCGCTCGTCCGGCGTCTCTGGAGGAGCCGTGCGCCCGGCGGCG
AGGACGAGGAGGAGGGCGCGTGGGGAGGCGGTGGAGGAGGCGAGCTGCGGGGAGAAGGGGCGAC
GGACGGCCGGGCACATGGGGCCGGTGGCGGCGGCGCAGGCAGGGCTGGCTGCTGCCTGGGCAAG
GCGGTGCGAGGTGCCAAAGGTCACCACCATCCCCACCCCCCAGCCGCGGGCGCCGGCGTGGCCG
GGGGCGCCGAGGCGGATCTGAAGGCGCTCACGCACTCGGTGCTTAAGAAACTGAAGGAACGGCA
GCTGGAGCTGCTGCTCCAGGCCGTGGAGTCCCGCGGCGGTACGCGCACGGCGTGCCTCTTGCTG
CCCGGCCGCCTGGACTGCAGGCTGGGCCTGGGGGCGCCTGCCGGCTCACAGCCCGCGCAGCCGC
CCTCGTCCTACTCGCTCCCCCTCCTGCTGTGCAAAGTGTTCAGGTGGCCGGATCTCAGGCATTC
CTCGGAAGTCAAGAGGCTGTGTTGCTGTGAATCTTACGGGAAGATCAACCCCGAGCTGGTGTGC
TGCAACCCCCATCACCTTAGCCGACTCTGCGAACTAGAGTCTCCCCCTCCTCCTTACTCCAGAT
ACCCGATGGATTTTCTCAAACCAACTGACTGTCCAGATGCTGTGCCTTCCTCCGCTGAAACAGG
GGGAACGAATTATCTGGCCCCTGGGGGGCTTTCAGATTCCCAACTTCTTCTGGAGCCTGGGGAT
CGGTCACACTGGTGCGTGGTGGCATACTGGGAGGAGAAGACGAGAGTGGGGAGGCTCTACTGTG
TCCAGGAGCCCTCCCTGGATATCTTTTATGATCTACCTCAGGGGAATGGCTTTTGCCTTGGACA
GCTCAATTCGGACAACAAGAGTCAGCTGGTGCAGAAAGTGCGGAGCAAGATCGGCTGTGGCATC
CAGCTCACGCGGGAAGTGGATGGCGTGTGGGTGTACAACCGCAGCAGTTACCCCATCTTCATCA
AGTCAGCCACACTGGACAACCCGGACTCCAGGACGCTGTTGGTACACAAAGTGTTCCCCGGTTT
CTCCATCAAGGCTTTTGACTATGAGAAAGCGTACAGCCTGCAGCGGCCCAACGACCACGAGTTC
ATGCAGCAGCCGTGGACTGGGTTCACCGTGCAGATCAGCTTCGTGAAGGGCTGGGGCCAGTGCT
ACACCCGGCAGTTCATCAGCAGCTGCCCATGCTGGCTGGAGGTCATCTTCAACAGCCGGTAGCC
TCGTGGGGGAGAGGACAGAGCGGGAGCCGAGCGGGCCCAGTCCAAACTACTTTGCTGCTAAGAT
TTTCCTCCTGAGTGCTTGCTTTTCATGCAAACTCTTTGGTCATTTTTTTTTTCCTTCCTCTCGT
CGTTCTTGTTTATGTTATGTTTTGTTTTGTTCTTTGAGAAATAGCTTATGAAAAGAATTGTTGG
TTTTTTTTTTTTTTTTTTTTCCTCTTCGGGGCGGGTTGGGGCGGGGGCAGGGGTGGGCAGTGGT
AAGGTTGGCAGAACACCCAGATCTGAAAAGGGGAAGCAAAAATCAGTGCCACCAAACACAGTGT
AAATGGGGAGCAGGCCCCAACCTTGGGGTCATCGTAGCCCTTAGTAGGGCTTATGTGTGAGTGA
GTGTGTGCGCGTGTGTGAGTGTAGATGGGGGAGGCGGTGTGCTCTGTGTTGTTAACTACGAATG
CTCCCAAGCTGTGTCTCTAGCCCCTTGCACCTGCGCAGTGGGGCAGCAGGTCTCCCAGCAGCTG
CCAGCAGCAAGGTTGTGTCCCCAGCCTGTGGAAGCCCCCCTGCCCCTCGCCACCCCTTCCTAGG
ACATTGGCCTGTCCGCAGGCTTCTTCGAAGCAGCTCTACAAGAAGCCGAACCAGAACCTATTTC
CCATGCTGTCTCACTCGCCCCCGCCCCCTCCAGCCACCTCCCTGCCATCGTCCTTTCTCTTTTG
GCCACCTGCTCCTGGATTGTCTCTGAGATGGACTTCCTGAGGGCTGCCGGGGCAGCCCCATTAC
AGTATTGCTCACCCAGTGCCCTCTCAGGCCCCTCAGCCTCTCCCCGTCCCTGGTTACATCAGGT
TTTTCCTGGATTCAGAAAACCAGCTCAGCATTTTCCTTCCCTCCGCAGCCTGTGTGCTGAGCTC
TGCTGTTAGACCAGTGAGGGGAGCAGCACCCCCCTGCCCCCCGCTCCCCCTTCCCACCAAGAAG
GATTCGGTCCATTGTAACCCAAGGTACCATCCTGAGCTGACACCCCTAACTCTTCTCATTTCTT
CTACAACTCATACACTCGGATGATACGTTGACACTGCTCTTAGCTCAATGAGCATGTTTAGACT
TTAACATAAGCTATTTTTCTAACTACAAAGGTTTAAATGAACAAGAGAAGCATTCTCATTGGAA
ATTTAGCATTGTAGTGCTTTGAGAGAGAAAGGACTCCTGAAAAAAACCTGAGATTTATTAAAGA
AAAAATGTATTTTATGTTATATATAAATATATTATTACTTGTAAATATGAAGACGTTTTATAAG
CATCATTATTTATGTATTGTGCAATGTGTATAAACAAAAATAAAGAAAAGATGCACTTTGCTTT
AATATAAATGCAAATAACAAATGCCAAATTAAAAAAAGATAAACACAAGATTGGTGTTTTTTTC
TATGGGTGTTATCACCTGGCTGAATGTTTTTCTAAAGGAGTTTATGTTCCATTAAACAATTTTT
AAAATGTAAAAA

hide sequence

RefSeq Acc Id:

XM_005659454 ⟹ XP_005659511

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	98,512,800 - 98,543,922 (-)	NCBI

Sequence:

show sequence

TGCGGGAGGCGGCGAGCCCAGGGCACACTCGCTCGCCTGCTCGGCGCACGGAGGATCCTGTCCC
CGAACCGCGCCAGGCGAGCCAGCCGGGCGCCGTGCTCTGTCCGCTCGCCGCGCGGGAGAGAGCT
GCCCGAGACAGAGCCAGCCCGCCGGCGCCGAGCTGCCGAGCGCCTGGCCCAGGAGTCCCTGGTG
CGGCGCGGCGAGCCCCCGGCGGCGGCAGAAGGACTCGAGCGCCAGGAGAGGGCGGACGGGGGAC
AAGGAGGCTCCCGGGCGCGACGAGGAGAGTCTCGGAGGAGAAGGCGGCGTGAGGGACACCGGGG
CCTCCAGCCGACGCAGCCTTGTCGGGGCGAGCAGCCCATAAGGGGAGCCCCGGCTCCCAGGGGA
GGGGACACCGGCGGCCCCCGCGCTAGCGAGCGGAGGGCGAGAGCGCGCGACCCGCCAGGGGCCC
GCCGCGGCCGCCGCGCCGCCCTCCCCCGCGCTGTCAGCCCCGCGGGGCGCAGCCGCCGCCGCAG
CATCTTCTGCCCCTGCGCCCCCGCCAGCCCCGAGGAAGTCCCCGCCGAGGACTAGGGCCCCCGG
GAGCTCAGGAGGAAAGACCAGAGACTCCTCCAAATCACCCAGATGCGAAGGATTGAAACAGCCT
AGCCAAAGCTTTCTGTGGATTAAAAAAATACACGGCTTTTTTTTTTTTTCCCCCGAAGAAAAGG
AGAGGAAGACCAGTGGGGCTCTGCAAGGAAAAAGGGGAATGTAACTCGTGGATACCTTTTTTCC
ACCCCTCAGACGTCTTGTTCTACTTTGTAAACATTTTCTTTTTTTAAACCCCAGCTCCAGCCAG
ACGCCCCCAGACCTCCGGGGTGCGAGGAGGTGGTGGTTTTCATTTTGGGCTTTGCGTATTTGGT
TCTTAGATTTTGAGAGAACCTCCTTATTTCGCCAAACATCTCCTGCGGGGTGAAGTCCACTCGG
CCCCCTCCCCCGAGTCTTCGTGTGCACGGAATTCAAGGAGATCCGGTTACTAAGGATATAGAAG
AAAAAAATAAATCGCGTGCCTGCCTTTTTTTTTTTTTTTTTAATTGCCTCCTTCTCCCCACCCC
CAAATTAAGTTGCTTAGGAAGGGGAAAAGAGGCTTTTTCCTCCCTCCGGCAGCCCAGCCGAACG
CCTTTCTTTTTTTGCCCCCGCGGATCTTCCATGTAGGAAGCCAAGGCTGGCGAGCCCGACACTC
GGGAGCCGCTGCGGGGGGGCCTCTTTTTGGGGAGGCGCCGACCGGGGTAGGCTTCGCCGCCCCC
AGGGAAGCGGCGGCCGCGTTCCTCCGGGGTGCGCCGGGGCCCGAGAGCAGCGCGCGGCTCGGGC
CGCGCGGGGTGGGGCAGCCGGAGCGCAGGCCCCCGAGCCCCGGCGGGCGCCTCCGGGCCCCCGC
GCGCCCCCCGGCCTCCGGGAGACTGGCGCATGCCACGGAGCGCCCCTCGGGCCGCCGCCGCTCC
TGCCCGGGCCCCTGCTGCTGCTGCTGTCGCCTGCGCCTGCTGCCCCAACTCGGCGCCCGACTTC
TTCATGGTGTGCGGAGGTCATGTTCGCTCCTTAGCCGGCAAACGACTTTTCTCCTCGCCTCCTC
GCCCCGCATGTTCAGGACCAAACGATCTGCGCTCGTCCGGCGTCTCTGGAGGAGCCGTGCGCCC
GGCGGCGAGGACGAGGAGGAGGGCGCGTGGGGAGGCGGTGGAGGAGGCGAGCTGCGGGGAGAAG
GGGCGACGGACGGCCGGGCACATGGGGCCGGTGGCGGCGGCGCAGGCAGGGCTGGCTGCTGCCT
GGGCAAGGCGGTGCGAGGTGCCAAAGGTCACCACCATCCCCACCCCCCAGCCGCGGGCGCCGGC
GTGGCCGGGGGCGCCGAGGCGGATCTGAAGGCGCTCACGCACTCGGTGCTTAAGAAACTGAAGG
AACGGCAGCTGGAGCTGCTGCTCCAGGCCGTGGAGTCCCGCGGCGGTACGCGCACGGCGTGCCT
CTTGCTGCCCGGCCGCCTGGACTGCAGGCTGGGCCTGGGGGCGCCTGCCGGCTCACAGCCCGCG
CAGCCGCCCTCGTCCTACTCGCTCCCCCTCCTGCTGTGCAAAGTGTTCAGGTGGCCGGATCTCA
GGCATTCCTCGGAAGTCAAGAGGCTGTGTTGCTGTGAATCTTACGGGAAGATCAACCCCGAGCT
GGTGTGCTGCAACCCCCATCACCTTAGCCGACTCTGCGAACTAGAGTCTCCCCCTCCTCCTTAC
TCCAGATACCCGATGGATTTTCTCAAACCAACTGCAGACTGTCCAGATGCTGTGCCTTCCTCCG
CTGAAACAGGGGGAACGAATTATCTGGCCCCTGGGGGGCTTTCAGATTCCCAACTTCTTCTGGA
GCCTGGGGATCGGTCACACTGGTGCGTGGTGGCATACTGGGAGGAGAAGACGAGAGTGGGGAGG
CTCTACTGTGTCCAGGAGCCCTCCCTGGATATCTTTTATGATCTACCTCAGGGGAATGGCTTTT
GCCTTGGACAGCTCAATTCGGACAACAAGAGTCAGCTGGTGCAGAAAGTGCGGAGCAAGATCGG
CTGTGGCATCCAGCTCACGCGGGAAGTGGATGGCGTGTGGGTGTACAACCGCAGCAGTTACCCC
ATCTTCATCAAGTCAGCCACACTGGACAACCCGGACTCCAGGACGCTGTTGGTACACAAAGTGT
TCCCCGGTTTCTCCATCAAGGCTTTTGACTATGAGAAAGCGTACAGCCTGCAGCGGCCCAACGA
CCACGAGTTCATGCAGCAGCCGTGGACTGGGTTCACCGTGCAGATCAGCTTCGTGAAGGGCTGG
GGCCAGTGCTACACCCGGCAGTTCATCAGCAGCTGCCCATGCTGGCTGGAGGTCATCTTCAACA
GCCGGTAGCCTCGTGGGGGAGAGGACAGAGCGGGAGCCGAGCGGGCCCAGTCCAAACTACTTTG
CTGCTAAGATTTTCCTCCTGAGTGCTTGCTTTTCATGCAAACTCTTTGGTCATTTTTTTTTTCC
TTCCTCTCGTCGTTCTTGTTTATGTTATGTTTTGTTTTGTTCTTTGAGAAATAGCTTATGAAAA
GAATTGTTGGTTTTTTTTTTTTTTTTTTTTCCTCTTCGGGGCGGGTTGGGGCGGGGGCAGGGGT
GGGCAGTGGTAAGGTTGGCAGAACACCCAGATCTGAAAAGGGGAAGCAAAAATCAGTGCCACCA
AACACAGTGTAAATGGGGAGCAGGCCCCAACCTTGGGGTCATCGTAGCCCTTAGTAGGGCTTAT
GTGTGAGTGAGTGTGTGCGCGTGTGTGAGTGTAGATGGGGGAGGCGGTGTGCTCTGTGTTGTTA
ACTACGAATGCTCCCAAGCTGTGTCTCTAGCCCCTTGCACCTGCGCAGTGGGGCAGCAGGTCTC
CCAGCAGCTGCCAGCAGCAAGGTTGTGTCCCCAGCCTGTGGAAGCCCCCCTGCCCCTCGCCACC
CCTTCCTAGGACATTGGCCTGTCCGCAGGCTTCTTCGAAGCAGCTCTACAAGAAGCCGAACCAG
AACCTATTTCCCATGCTGTCTCACTCGCCCCCGCCCCCTCCAGCCACCTCCCTGCCATCGTCCT
TTCTCTTTTGGCCACCTGCTCCTGGATTGTCTCTGAGATGGACTTCCTGAGGGCTGCCGGGGCA
GCCCCATTACAGTATTGCTCACCCAGTGCCCTCTCAGGCCCCTCAGCCTCTCCCCGTCCCTGGT
TACATCAGGTTTTTCCTGGATTCAGAAAACCAGCTCAGCATTTTCCTTCCCTCCGCAGCCTGTG
TGCTGAGCTCTGCTGTTAGACCAGTGAGGGGAGCAGCACCCCCCTGCCCCCCGCTCCCCCTTCC
CACCAAGAAGGATTCGGTCCATTGTAACCCAAGGTACCATCCTGAGCTGACACCCCTAACTCTT
CTCATTTCTTCTACAACTCATACACTCGGATGATACGTTGACACTGCTCTTAGCTCAATGAGCA
TGTTTAGACTTTAACATAAGCTATTTTTCTAACTACAAAGGTTTAAATGAACAAGAGAAGCATT
CTCATTGGAAATTTAGCATTGTAGTGCTTTGAGAGAGAAAGGACTCCTGAAAAAAACCTGAGAT
TTATTAAAGAAAAAATGTATTTTATGTTATATATAAATATATTATTACTTGTAAATATGAAGAC
GTTTTATAAGCATCATTATTTATGTATTGTGCAATGTGTATAAACAAAAATAAAGAAAAGATGC
ACTTTGCTTTAATATAAATGCAAATAACAAATGCCAAATTAAAAAAAGATAAACACAAGATTGG
TGTTTTTTTCTATGGGTGTTATCACCTGGCTGAATGTTTTTCTAAAGGAGTTTATGTTCCATTA
AACAATTTTTAAAATGTA

hide sequence

RefSeq Acc Id:

XM_013992844 ⟹ XP_013848298

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	98,512,800 - 98,543,924 (-)	NCBI

Sequence:

show sequence

CTTGCGGGAGGCGGCGAGCCCAGGGCACACTCGCTCGCCTGCTCGGCGCACGGAGGATCCTGTC
CCCGAACCGCGCCAGGCGAGCCAGCCGGGCGCCGTGCTCTGTCCGCTCGCCGCGCGGGAGAGAG
CTGCCCGAGACAGAGCCAGCCCGCCGGCGCCGAGCTGCCGAGCGCCTGGCCCAGGAGTCCCTGG
TGCGGCGCGGCGAGCCCCCGGCGGCGGCAGAAGGACTCGAGCGCCAGGAGAGGGCGGACGGGGG
ACAAGGAGGCTCCCGGGCGCGACGAGGAGAGTCTCGGAGGAGAAGGCGGCGTGAGGGACACCGG
GGCCTCCAGCCGACGCAGCCTTGTCGGGGCGAGCAGCCCATAAGGGGAGCCCCGGCTCCCAGGG
GAGGGGACACCGGCGGCCCCCGCGCTAGCGAGCGGAGGGCGAGAGCGCGCGACCCGCCAGGGGC
CCGCCGCGGCCGCCGCGCCGCCCTCCCCCGCGCTGTCAGCCCCGCGGGGCGCAGCCGCCGCCGC
AGCATCTTCTGCCCCTGCGCCCCCGCCAGCCCCGAGGAAGTCCCCGCCGAGGACTAGGGCCCCC
GGGAGCTCAGGAGGAAAGACCAGAGACTCCTCCAAATCACCCAGATGCGAAGGATTGAAACAGC
CTAGCCAAAGCTTTCTGTGGATTAAAAAAATACACGGCTTTTTTTTTTTTTCCCCCGAAGAAAA
GGAGAGGAAGACCAGTGGGGCTCTGCAAGGAAAAAGGGGAATGTAACTCGTGGATACCTTTTTT
CCACCCCTCAGACGTCTTGTTCTACTTTGTAAACATTTTCTTTTTTTAAACCCCAGCTCCAGCC
AGACGCCCCCAGACCTCCGGGGTGCGAGGAGGTGGTGGTTTTCATTTTGGGCTTTGCGTATTTG
GTTCTTAGATTTTGAGAGAACCTCCTTATTTCGCCAAACATCTCCTGCGGGGTGAAGTCCACTC
GGCCCCCTCCCCCGAGTCTTCGTGTGCACGGAATTCAAGGAGATCCGGTTACTAAGGATATAGA
AGAAAAAAATAAATCGCGTGCCTGCCTTTTTTTTTTTTTTTTTAATTGCCTCCTTCTCCCCACC
CCCAAATTAAGTTGCTTAGGAAGGGGAAAAGAGGCTTTTTCCTCCCTCCGGCAGCCCAGCCGAA
CGCCTTTCTTTTTTTGCCCCCGCGGATCTTCCATGTAGGAAGCCAAGGCTGGCGAGCCCGACAC
TCGGGAGCCGCTGCGGGGGGGCCTCTTTTTGGGGAGGCGCCGACCGGGGTAGGCTTCGCCGCCC
CCAGGGAAGCGGCGGCCGCGTTCCTCCGGGGTGCGCCGGGGCCCGAGAGCAGCGCGCGGCTCGG
GCCGCGCGGGGTGGGGCAGCCGGAGCGCAGGCCCCCGAGCCCCGGCGGGCGCCTCCGGGCCCCC
GCGCGCCCCCCGGCCTCCGGGAGACTGGCGCATGCCACGGAGCGCCCCTCGGGCCGCCGCCGCT
CCTGCCCGGGCCCCTGCTGCTGCTGCTGTCGCCTGCGCCTGCTGCCCCAACTCGGCGCCCGACT
TCTTCATGGTGTGCGGAGGTCATGTTCGCTCCTTAGCCGGCAAACGACTTTTCTCCTCGCCTCC
TCGCCCCGCATGTTCAGGACCAAACGATCTGCGCTCGTCCGGCGTCTCTGGAGGAGCCGTGCGC
CCGGCGGCGAGGACGAGGAGGAGGGCGCGTGGGGAGGCGGTGGAGGAGGCGAGCTGCGGGGAGA
AGGGGCGACGGACGGCCGGGCACATGGGGCCGGTGGCGGCGGCGCAGGCAGGGCTGGCTGCTGC
CTGGGCAAGGCGGTGCGAGGTGCCAAAGGTCACCACCATCCCCACCCCCCAGCCGCGGGCGCCG
GCGTGGCCGGGGGCGCCGAGGCGGATCTGAAGGCGCTCACGCACTCGGTGCTTAAGAAACTGAA
GGAACGGCAGCTGGAGCTGCTGCTCCAGGCCGTGGAGTCCCGCGGCGGTACGCGCACGGCGTGC
CTCTTGCTGCCCGGCCGCCTGGACTGCAGGCTGGGCCTGGGGGCGCCTGCCGGCTCACAGCCCG
CGCAGCCGCCCTCGTCCTACTCGCTCCCCCTCCTGCTGTGCAAAGTGTTCAGGTGGCCGGATCT
CAGGCATTCCTCGGAAGTCAAGAGGCTGTGTTGCTGTGAATCTTACGGGAAGATCAACCCCGAG
CTGGTGTGCTGCAACCCCCATCACCTTAGCCGACTCTGCGAACTAGAGTCTCCCCCTCCTCCTT
ACTCCAGATACCCGATGGATTTTCTCAAACCAACTGATTCCCAACTTCTTCTGGAGCCTGGGGA
TCGGTCACACTGGTGCGTGGTGGCATACTGGGAGGAGAAGACGAGAGTGGGGAGGCTCTACTGT
GTCCAGGAGCCCTCCCTGGATATCTTTTATGATCTACCTCAGGGGAATGGCTTTTGCCTTGGAC
AGCTCAATTCGGACAACAAGAGTCAGCTGGTGCAGAAAGTGCGGAGCAAGATCGGCTGTGGCAT
CCAGCTCACGCGGGAAGTGGATGGCGTGTGGGTGTACAACCGCAGCAGTTACCCCATCTTCATC
AAGTCAGCCACACTGGACAACCCGGACTCCAGGACGCTGTTGGTACACAAAGTGTTCCCCGGTT
TCTCCATCAAGGCTTTTGACTATGAGAAAGCGTACAGCCTGCAGCGGCCCAACGACCACGAGTT
CATGCAGCAGCCGTGGACTGGGTTCACCGTGCAGATCAGCTTCGTGAAGGGCTGGGGCCAGTGC
TACACCCGGCAGTTCATCAGCAGCTGCCCATGCTGGCTGGAGGTCATCTTCAACAGCCGGTAGC
CTCGTGGGGGAGAGGACAGAGCGGGAGCCGAGCGGGCCCAGTCCAAACTACTTTGCTGCTAAGA
TTTTCCTCCTGAGTGCTTGCTTTTCATGCAAACTCTTTGGTCATTTTTTTTTTCCTTCCTCTCG
TCGTTCTTGTTTATGTTATGTTTTGTTTTGTTCTTTGAGAAATAGCTTATGAAAAGAATTGTTG
GTTTTTTTTTTTTTTTTTTTTCCTCTTCGGGGCGGGTTGGGGCGGGGGCAGGGGTGGGCAGTGG
TAAGGTTGGCAGAACACCCAGATCTGAAAAGGGGAAGCAAAAATCAGTGCCACCAAACACAGTG
TAAATGGGGAGCAGGCCCCAACCTTGGGGTCATCGTAGCCCTTAGTAGGGCTTATGTGTGAGTG
AGTGTGTGCGCGTGTGTGAGTGTAGATGGGGGAGGCGGTGTGCTCTGTGTTGTTAACTACGAAT
GCTCCCAAGCTGTGTCTCTAGCCCCTTGCACCTGCGCAGTGGGGCAGCAGGTCTCCCAGCAGCT
GCCAGCAGCAAGGTTGTGTCCCCAGCCTGTGGAAGCCCCCCTGCCCCTCGCCACCCCTTCCTAG
GACATTGGCCTGTCCGCAGGCTTCTTCGAAGCAGCTCTACAAGAAGCCGAACCAGAACCTATTT
CCCATGCTGTCTCACTCGCCCCCGCCCCCTCCAGCCACCTCCCTGCCATCGTCCTTTCTCTTTT
GGCCACCTGCTCCTGGATTGTCTCTGAGATGGACTTCCTGAGGGCTGCCGGGGCAGCCCCATTA
CAGTATTGCTCACCCAGTGCCCTCTCAGGCCCCTCAGCCTCTCCCCGTCCCTGGTTACATCAGG
TTTTTCCTGGATTCAGAAAACCAGCTCAGCATTTTCCTTCCCTCCGCAGCCTGTGTGCTGAGCT
CTGCTGTTAGACCAGTGAGGGGAGCAGCACCCCCCTGCCCCCCGCTCCCCCTTCCCACCAAGAA
GGATTCGGTCCATTGTAACCCAAGGTACCATCCTGAGCTGACACCCCTAACTCTTCTCATTTCT
TCTACAACTCATACACTCGGATGATACGTTGACACTGCTCTTAGCTCAATGAGCATGTTTAGAC
TTTAACATAAGCTATTTTTCTAACTACAAAGGTTTAAATGAACAAGAGAAGCATTCTCATTGGA
AATTTAGCATTGTAGTGCTTTGAGAGAGAAAGGACTCCTGAAAAAAACCTGAGATTTATTAAAG
AAAAAATGTATTTTATGTTATATATAAATATATTATTACTTGTAAATATGAAGACGTTTTATAA
GCATCATTATTTATGTATTGTGCAATGTGTATAAACAAAAATAAAGAAAAGATGCACTTTGCTT
TAATATAAATGCAAATAACAAATGCCAAATTAAAAAAAGATAAACACAAGATTGGTGTTTTTTT
CTATGGGTGTTATCACCTGGCTGAATGTTTTTCTAAAGGAGTTTATGTTCCATTAAACAATTTT
TAAAATGTA

hide sequence

RefSeq Acc Id:

XM_013992845 ⟹ XP_013848299

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	98,512,800 - 98,541,678 (-)	NCBI

Sequence:

show sequence

CACCTCTCCCCTTGGCGCTCAAGTAGTGAAAGAAAAGCCCCCTTCGGCTGTGTGTTTGTGCAGC
TGTCTCGCCAGAGGGGAGAGTACATCCCCTCCTGGGAGAAGACTAGAGGGACAAAGGTAGAGAA
GGGACTGGGGGGAACCTGGAAAGGCATTCCCTGGGGGTTCCCTTACAGTTTTTTTCTCCTCCTC
TGTTTCCCCTAGCGGGGTTTTGGGCACTGCTCATGCACACACTCTACAGACCGGGGGTTAAAAA
TTAGATAGATTTCTCATTTCCGGATCAACCAAGGGGTGCAGAGAGAAGTGTGTGGGGGGGAGGA
GGGGGGGTCACGCCTCCCCTGCACCCGGAAAGGCGTTGAGGTGTGTGGCCGAGTTGGATTCGGT
CCAAGCCCGCCAAGGAAGGCTGGGAGAAGCAGTTGTAAAGACTGGAACGTCTCTGCCTGCTCCT
TTAGTAAATAAGGAGAGTCCTGTCGGGCACAAGTGGCTGGGAAAGTGCCCTGTCCGGAGTAGCT
TTGTGTTTTGGGGCGAAGAGAGTTTGATGGGCGGCGGCGCTGGATATCTGCTCTCAACTCTGCC
AGCCCAGGGTGGAAGAGGACAAGCAGTCAGGAGAAAGTCTCCCCCTCCTCCTTACTCCAGATAC
CCGATGGATTTTCTCAAACCAACTGCAGACTGTCCAGATGCTGTGCCTTCCTCCGCTGAAACAG
GGGGAACGAATTATCTGGCCCCTGGGGGGCTTTCAGATTCCCAACTTCTTCTGGAGCCTGGGGA
TCGGTCACACTGGTGCGTGGTGGCATACTGGGAGGAGAAGACGAGAGTGGGGAGGCTCTACTGT
GTCCAGGAGCCCTCCCTGGATATCTTTTATGATCTACCTCAGGGGAATGGCTTTTGCCTTGGAC
AGCTCAATTCGGACAACAAGAGTCAGCTGGTGCAGAAAGTGCGGAGCAAGATCGGCTGTGGCAT
CCAGCTCACGCGGGAAGTGGATGGCGTGTGGGTGTACAACCGCAGCAGTTACCCCATCTTCATC
AAGTCAGCCACACTGGACAACCCGGACTCCAGGACGCTGTTGGTACACAAAGTGTTCCCCGGTT
TCTCCATCAAGGCTTTTGACTATGAGAAAGCGTACAGCCTGCAGCGGCCCAACGACCACGAGTT
CATGCAGCAGCCGTGGACTGGGTTCACCGTGCAGATCAGCTTCGTGAAGGGCTGGGGCCAGTGC
TACACCCGGCAGTTCATCAGCAGCTGCCCATGCTGGCTGGAGGTCATCTTCAACAGCCGGTAGC
CTCGTGGGGGAGAGGACAGAGCGGGAGCCGAGCGGGCCCAGTCCAAACTACTTTGCTGCTAAGA
TTTTCCTCCTGAGTGCTTGCTTTTCATGCAAACTCTTTGGTCATTTTTTTTTTCCTTCCTCTCG
TCGTTCTTGTTTATGTTATGTTTTGTTTTGTTCTTTGAGAAATAGCTTATGAAAAGAATTGTTG
GTTTTTTTTTTTTTTTTTTTTCCTCTTCGGGGCGGGTTGGGGCGGGGGCAGGGGTGGGCAGTGG
TAAGGTTGGCAGAACACCCAGATCTGAAAAGGGGAAGCAAAAATCAGTGCCACCAAACACAGTG
TAAATGGGGAGCAGGCCCCAACCTTGGGGTCATCGTAGCCCTTAGTAGGGCTTATGTGTGAGTG
AGTGTGTGCGCGTGTGTGAGTGTAGATGGGGGAGGCGGTGTGCTCTGTGTTGTTAACTACGAAT
GCTCCCAAGCTGTGTCTCTAGCCCCTTGCACCTGCGCAGTGGGGCAGCAGGTCTCCCAGCAGCT
GCCAGCAGCAAGGTTGTGTCCCCAGCCTGTGGAAGCCCCCCTGCCCCTCGCCACCCCTTCCTAG
GACATTGGCCTGTCCGCAGGCTTCTTCGAAGCAGCTCTACAAGAAGCCGAACCAGAACCTATTT
CCCATGCTGTCTCACTCGCCCCCGCCCCCTCCAGCCACCTCCCTGCCATCGTCCTTTCTCTTTT
GGCCACCTGCTCCTGGATTGTCTCTGAGATGGACTTCCTGAGGGCTGCCGGGGCAGCCCCATTA
CAGTATTGCTCACCCAGTGCCCTCTCAGGCCCCTCAGCCTCTCCCCGTCCCTGGTTACATCAGG
TTTTTCCTGGATTCAGAAAACCAGCTCAGCATTTTCCTTCCCTCCGCAGCCTGTGTGCTGAGCT
CTGCTGTTAGACCAGTGAGGGGAGCAGCACCCCCCTGCCCCCCGCTCCCCCTTCCCACCAAGAA
GGATTCGGTCCATTGTAACCCAAGGTACCATCCTGAGCTGACACCCCTAACTCTTCTCATTTCT
TCTACAACTCATACACTCGGATGATACGTTGACACTGCTCTTAGCTCAATGAGCATGTTTAGAC
TTTAACATAAGCTATTTTTCTAACTACAAAGGTTTAAATGAACAAGAGAAGCATTCTCATTGGA
AATTTAGCATTGTAGTGCTTTGAGAGAGAAAGGACTCCTGAAAAAAACCTGAGATTTATTAAAG
AAAAAATGTATTTTATGTTATATATAAATATATTATTACTTGTAAATATGAAGACGTTTTATAA
GCATCATTATTTATGTATTGTGCAATGTGTATAAACAAAAATAAAGAAAAGATGCACTTTGCTT
TAATATAAATGCAAATAACAAATGCCAAATTAAAAAAAGATAAACACAAGATTGGTGTTTTTTT
CTATGGGTGTTATCACCTGGCTGAATGTTTTTCTAAAGGAGTTTATGTTCCATTAAACAATTTT
TAAAATGTA

hide sequence

RefSeq Acc Id:

XM_013992846 ⟹ XP_013848300

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	1	98,512,800 - 98,541,061 (-)	NCBI

Sequence:

show sequence

TGCCCTCTGCTTTTTCCTTTCTTCCTGCACAGGAAAGCACAGTTCCTGACTGCAGAAGGGTCGG
GCCCCAGCCCTCCCTGACGACACGGCCCCTTAACAGCTCTGGGGCCTGGGCTTCTCAGCTGAGA
TCCCAGCCTCCTGCATTGCTTTCCTTTTCTCTGCATATTTGTGTGGGGCGGGGGTGCACCCGGG
GCGTTCACAAATCCAAGTTCACCAGCGGACTTGGGGTAAACCTCGCGGGTGGGCTGGGAGAGGG
GAGCCCCGAGTTCCCCCGCGCGGTGTGGAGAGGAGCTGCGGTGGCCAAGAGTCTCCCCCTCCTC
CTTACTCCAGATACCCGATGGATTTTCTCAAACCAACTGCAGACTGTCCAGATGCTGTGCCTTC
CTCCGCTGAAACAGGGGGAACGAATTATCTGGCCCCTGGGGGGCTTTCAGATTCCCAACTTCTT
CTGGAGCCTGGGGATCGGTCACACTGGTGCGTGGTGGCATACTGGGAGGAGAAGACGAGAGTGG
GGAGGCTCTACTGTGTCCAGGAGCCCTCCCTGGATATCTTTTATGATCTACCTCAGGGGAATGG
CTTTTGCCTTGGACAGCTCAATTCGGACAACAAGAGTCAGCTGGTGCAGAAAGTGCGGAGCAAG
ATCGGCTGTGGCATCCAGCTCACGCGGGAAGTGGATGGCGTGTGGGTGTACAACCGCAGCAGTT
ACCCCATCTTCATCAAGTCAGCCACACTGGACAACCCGGACTCCAGGACGCTGTTGGTACACAA
AGTGTTCCCCGGTTTCTCCATCAAGGCTTTTGACTATGAGAAAGCGTACAGCCTGCAGCGGCCC
AACGACCACGAGTTCATGCAGCAGCCGTGGACTGGGTTCACCGTGCAGATCAGCTTCGTGAAGG
GCTGGGGCCAGTGCTACACCCGGCAGTTCATCAGCAGCTGCCCATGCTGGCTGGAGGTCATCTT
CAACAGCCGGTAGCCTCGTGGGGGAGAGGACAGAGCGGGAGCCGAGCGGGCCCAGTCCAAACTA
CTTTGCTGCTAAGATTTTCCTCCTGAGTGCTTGCTTTTCATGCAAACTCTTTGGTCATTTTTTT
TTTCCTTCCTCTCGTCGTTCTTGTTTATGTTATGTTTTGTTTTGTTCTTTGAGAAATAGCTTAT
GAAAAGAATTGTTGGTTTTTTTTTTTTTTTTTTTTCCTCTTCGGGGCGGGTTGGGGCGGGGGCA
GGGGTGGGCAGTGGTAAGGTTGGCAGAACACCCAGATCTGAAAAGGGGAAGCAAAAATCAGTGC
CACCAAACACAGTGTAAATGGGGAGCAGGCCCCAACCTTGGGGTCATCGTAGCCCTTAGTAGGG
CTTATGTGTGAGTGAGTGTGTGCGCGTGTGTGAGTGTAGATGGGGGAGGCGGTGTGCTCTGTGT
TGTTAACTACGAATGCTCCCAAGCTGTGTCTCTAGCCCCTTGCACCTGCGCAGTGGGGCAGCAG
GTCTCCCAGCAGCTGCCAGCAGCAAGGTTGTGTCCCCAGCCTGTGGAAGCCCCCCTGCCCCTCG
CCACCCCTTCCTAGGACATTGGCCTGTCCGCAGGCTTCTTCGAAGCAGCTCTACAAGAAGCCGA
ACCAGAACCTATTTCCCATGCTGTCTCACTCGCCCCCGCCCCCTCCAGCCACCTCCCTGCCATC
GTCCTTTCTCTTTTGGCCACCTGCTCCTGGATTGTCTCTGAGATGGACTTCCTGAGGGCTGCCG
GGGCAGCCCCATTACAGTATTGCTCACCCAGTGCCCTCTCAGGCCCCTCAGCCTCTCCCCGTCC
CTGGTTACATCAGGTTTTTCCTGGATTCAGAAAACCAGCTCAGCATTTTCCTTCCCTCCGCAGC
CTGTGTGCTGAGCTCTGCTGTTAGACCAGTGAGGGGAGCAGCACCCCCCTGCCCCCCGCTCCCC
CTTCCCACCAAGAAGGATTCGGTCCATTGTAACCCAAGGTACCATCCTGAGCTGACACCCCTAA
CTCTTCTCATTTCTTCTACAACTCATACACTCGGATGATACGTTGACACTGCTCTTAGCTCAAT
GAGCATGTTTAGACTTTAACATAAGCTATTTTTCTAACTACAAAGGTTTAAATGAACAAGAGAA
GCATTCTCATTGGAAATTTAGCATTGTAGTGCTTTGAGAGAGAAAGGACTCCTGAAAAAAACCT
GAGATTTATTAAAGAAAAAATGTATTTTATGTTATATATAAATATATTATTACTTGTAAATATG
AAGACGTTTTATAAGCATCATTATTTATGTATTGTGCAATGTGTATAAACAAAAATAAAGAAAA
GATGCACTTTGCTTTAATATAAATGCAAATAACAAATGCCAAATTAAAAAAAGATAAACACAAG
ATTGGTGTTTTTTTCTATGGGTGTTATCACCTGGCTGAATGTTTTTCTAAAGGAGTTTATGTTC
CATTAAACAATTTTTAAAATGTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001231104	(Get FASTA)	NCBI Sequence Viewer
	XP_005659511	(Get FASTA)	NCBI Sequence Viewer
	XP_013848298	(Get FASTA)	NCBI Sequence Viewer
	XP_013848299	(Get FASTA)	NCBI Sequence Viewer
	XP_013848300	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ADM86397	(Get FASTA)	NCBI Sequence Viewer
	ADX68948	(Get FASTA)	NCBI Sequence Viewer
	CAX36912	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	XP_013848298 ⟸ XM_013992844
- Peptide Label:	isoform X2
- UniProtKB:	A0A287ASU5 (UniProtKB/TrEMBL), A0A4X1UKJ4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFRTKRSALVRRLWRSRAPGGEDEEEGAWGGGGGGELRGEGATDGRAHGAGGGGAGRAGCCLGK AVRGAKGHHHPHPPAAGAGVAGGAEADLKALTHSVLKKLKERQLELLLQAVESRGGTRTACLLL PGRLDCRLGLGAPAGSQPAQPPSSYSLPLLLCKVFRWPDLRHSSEVKRLCCCESYGKINPELVC CNPHHLSRLCELESPPPPYSRYPMDFLKPTDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQE PSLDIFYDLPQGNGFCLGQLNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSA TLDNPDSRTLLVHKVFPGFSIKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTR QFISSCPCWLEVIFNSR hide sequence

RefSeq Acc Id:	XP_005659511 ⟸ XM_005659454
- Peptide Label:	isoform X1
- UniProtKB:	F1CK19 (UniProtKB/TrEMBL), A0A8D1CF02 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFRTKRSALVRRLWRSRAPGGEDEEEGAWGGGGGGELRGEGATDGRAHGAGGGGAGRAGCCLGK AVRGAKGHHHPHPPAAGAGVAGGAEADLKALTHSVLKKLKERQLELLLQAVESRGGTRTACLLL PGRLDCRLGLGAPAGSQPAQPPSSYSLPLLLCKVFRWPDLRHSSEVKRLCCCESYGKINPELVC CNPHHLSRLCELESPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNYLAPGGLSDSQLLLEPG DRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQLNSDNKSQLVQKVRSKIGCG IQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKVFPGFSIKAFDYEKAYSLQRPNDHE FMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNSR hide sequence

RefSeq Acc Id:

NP_001231104 ⟸ NM_001244175

- UniProtKB:

A0A4X1UM82 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFRTKRSALVRRLWRSRAPGGEDEEEGAWGGGGGGELRGEGATDGRAHGAGGGGAGRAGCCLGK
AVRGAKGHHHPHPPAAGAGVAGGAEADLKALTHSVLKKLKERQLELLLQAVESRGGTRTACLLL
PGRLDCRLGLGAPAGSQPAQPPSSYSLPLLLCKVFRWPDLRHSSEVKRLCCCESYGKINPELVC
CNPHHLSRLCELESPPPPYSRYPMDFLKPTDCPDAVPSSAETGGTNYLAPGGLSDSQLLLEPGD
RSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQLNSDNKSQLVQKVRSKIGCGI
QLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKVFPGFSIKAFDYEKAYSLQRPNDHEF
MQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNSR

hide sequence

RefSeq Acc Id:

XP_013848299 ⟸ XM_013992845

- Peptide Label:

isoform X3

- Sequence:

show sequence

MGGGAGYLLSTLPAQGGRGQAVRRKSPPPPYSRYPMDFLKPTADCPDAVPSSAETGGTNYLAPG
GLSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCVQEPSLDIFYDLPQGNGFCLGQLNSDNKSQ
LVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDSRTLLVHKVFPGFSIKAFDYE
KAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNSR

hide sequence

RefSeq Acc Id:

XP_013848300 ⟸ XM_013992846

- Peptide Label:

isoform X4

- Sequence:

show sequence

MDFLKPTADCPDAVPSSAETGGTNYLAPGGLSDSQLLLEPGDRSHWCVVAYWEEKTRVGRLYCV
QEPSLDIFYDLPQGNGFCLGQLNSDNKSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIK
SATLDNPDSRTLLVHKVFPGFSIKAFDYEKAYSLQRPNDHEFMQQPWTGFTVQISFVKGWGQCY
TRQFISSCPCWLEVIFNSR

hide sequence

RefSeq Acc Id:

ENSSSCP00000046968 ⟸ ENSSSCT00000044286

RefSeq Acc Id:

ENSSSCP00000004862 ⟸ ENSSSCT00000004979

Protein Domains

MH1 MH2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000004507	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015030426	UniProtKB/TrEMBL
	ENSSSCG00025004341	UniProtKB/TrEMBL
	ENSSSCG00030062011	UniProtKB/TrEMBL
	ENSSSCG00035001002	UniProtKB/TrEMBL
	ENSSSCG00040042622	UniProtKB/TrEMBL
	ENSSSCG00045016161	UniProtKB/TrEMBL
	ENSSSCG00050004045	UniProtKB/TrEMBL
	ENSSSCG00055007588	UniProtKB/TrEMBL
	ENSSSCG00060068684	UniProtKB/TrEMBL
	ENSSSCG00065016328	UniProtKB/TrEMBL
	ENSSSCG00070018041	UniProtKB/TrEMBL
Ensembl Protein	ENSSSCP00000004862	ENTREZGENE
	ENSSSCP00000004862.2	UniProtKB/TrEMBL
	ENSSSCP00015015986.1	UniProtKB/TrEMBL
	ENSSSCP00025002308.1	UniProtKB/TrEMBL
	ENSSSCP00025002313.1	UniProtKB/TrEMBL
	ENSSSCP00030039999.1	UniProtKB/TrEMBL
	ENSSSCP00035000346.1	UniProtKB/TrEMBL
	ENSSSCP00040023737.1	UniProtKB/TrEMBL
	ENSSSCP00045018989.1	UniProtKB/TrEMBL
	ENSSSCP00050002299.1	UniProtKB/TrEMBL
	ENSSSCP00050002308.1	UniProtKB/TrEMBL
	ENSSSCP00055011641.1	UniProtKB/TrEMBL
	ENSSSCP00055011672.1	UniProtKB/TrEMBL
	ENSSSCP00060040568.1	UniProtKB/TrEMBL
	ENSSSCP00060040578.1	UniProtKB/TrEMBL
	ENSSSCP00065008784.1	UniProtKB/TrEMBL
	ENSSSCP00070029753.1	UniProtKB/TrEMBL
	ENSSSCP00070029760.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000004979	ENTREZGENE
	ENSSSCT00000004979.5	UniProtKB/TrEMBL
	ENSSSCT00015040448.1	UniProtKB/TrEMBL
	ENSSSCT00025005798.1	UniProtKB/TrEMBL
	ENSSSCT00025005807.1	UniProtKB/TrEMBL
	ENSSSCT00030086719.1	UniProtKB/TrEMBL
	ENSSSCT00035001203.1	UniProtKB/TrEMBL
	ENSSSCT00040057080.1	UniProtKB/TrEMBL
	ENSSSCT00045027481.1	UniProtKB/TrEMBL
	ENSSSCT00050005505.1	UniProtKB/TrEMBL
	ENSSSCT00050005517.1	UniProtKB/TrEMBL
	ENSSSCT00055014797.1	UniProtKB/TrEMBL
	ENSSSCT00055014836.1	UniProtKB/TrEMBL
	ENSSSCT00060093777.1	UniProtKB/TrEMBL
	ENSSSCT00060093793.1	UniProtKB/TrEMBL
	ENSSSCT00065021672.1	UniProtKB/TrEMBL
	ENSSSCT00070035599.1	UniProtKB/TrEMBL
	ENSSSCT00070035606.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.200.10	UniProtKB/TrEMBL
	3.90.520.10	UniProtKB/TrEMBL
InterPro	Dwarfin	UniProtKB/TrEMBL
	MAD_homology1_Dwarfin-type	UniProtKB/TrEMBL
	MAD_homology_MH1	UniProtKB/TrEMBL
	SMAD-like_dom_sf	UniProtKB/TrEMBL
	SMAD_dom_Dwarfin-type	UniProtKB/TrEMBL
	SMAD_FHA_dom_sf	UniProtKB/TrEMBL
	SMAD_MH1_sf	UniProtKB/TrEMBL
KEGG Report	ssc:100521305	UniProtKB/TrEMBL
NCBI Gene	SMAD7	ENTREZGENE
PANTHER	MOTHERS AGAINST DECAPENTAPLEGIC HOMOLOG 7	UniProtKB/TrEMBL
	PTHR13703	UniProtKB/TrEMBL
Pfam	MH1	UniProtKB/TrEMBL
	MH2	UniProtKB/TrEMBL
PROSITE	MH1	UniProtKB/TrEMBL
	MH2	UniProtKB/TrEMBL
SMART	DWA	UniProtKB/TrEMBL
	DWB	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49879	UniProtKB/TrEMBL
	SSF56366	UniProtKB/TrEMBL
UniProt	A0A287ASU5	ENTREZGENE
	A0A4X1UKJ4	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UM82	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1CF02	ENTREZGENE, UniProtKB/TrEMBL
	C7C1K7_PIG	UniProtKB/TrEMBL
	F1CK19	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:93221	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)