ENG (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 268,309,400 - 268,343,783 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 268,309,379 - 268,343,861 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 302,232,063 - 302,266,139 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
ENG (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 9 | 127,815,016 - 127,854,658 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p13 Ensembl | 9 | 127,815,013 - 127,854,658 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 130,577,291 - 130,617,052 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 129,617,115 - 129,656,805 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 127,656,849 - 127,696,538 | NCBI | | | | | Celera | 9 | 101,228,133 - 101,267,888 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q34.11 | NCBI | | | | | HuRef | 9 | 100,194,111 - 100,234,515 (-) | NCBI | | HuRef | | | CHM1_1 | 9 | 130,728,823 - 130,768,983 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 140,022,435 - 140,062,072 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Eng (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 32,536,607 - 32,572,681 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 32,536,607 - 32,572,681 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 32,646,595 - 32,682,669 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 32,646,595 - 32,682,669 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 32,502,115 - 32,538,189 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 32,468,604 - 32,504,127 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 32,353,177 - 32,389,276 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | B | NCBI | | | | | cM Map | 2 | 22.09 | NCBI | | | | |
|
Eng (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
mRatBN7.2 | 3 | 15,934,566 - 15,972,618 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 15,934,518 - 15,973,230 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 19,003,353 - 19,041,237 (+) | NCBI | Rnor_SHR | | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 27,588,363 - 27,626,245 (+) | NCBI | Rnor_SHRSP | | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 25,839,360 - 25,877,319 (+) | NCBI | Rnor_WKY | | | | Rnor_6.0 | 3 | 11,679,530 - 11,717,486 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 11,679,530 - 11,717,485 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 17,021,673 - 17,058,548 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 3 | 10,675,660 - 10,713,537 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p11 | NCBI | | | | |
|
Eng (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955419 | 818,932 - 852,694 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955419 | 818,797 - 853,319 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
ENG (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1 | 9 | 11,502,983 - 11,542,901 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 98,934,080 - 98,973,862 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 127,605,608 - 127,644,641 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 127,605,608 - 127,644,641 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
ENG (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 9 | 55,558,246 - 55,590,081 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 55,558,305 - 55,589,064 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 54,752,221 - 54,783,620 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 56,480,195 - 56,511,601 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 56,480,054 - 56,511,589 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 55,240,157 - 55,271,556 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 55,554,890 - 55,586,290 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 55,646,354 - 55,677,713 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Eng (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 195,698,638 - 195,730,666 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936487 | 15,467,835 - 15,477,488 (-) | Ensembl | SpeTri2.0 | | | | SpeTri2.0 | NW_004936487 | 15,467,165 - 15,499,180 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
ENG (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 12 | 10,274,705 - 10,315,715 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 10,275,064 - 10,315,040 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666079 | 5,905,669 - 5,949,288 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Eng (Heterocephalus glaber - naked mole-rat) |
|