FST (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 16 | 32,805,932 - 32,811,421 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 16 | 32,806,341 - 32,811,382 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 16 | 34,779,040 - 34,784,066 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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FST (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 5 | 53,480,629 - 53,487,134 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 53,480,626 - 53,487,134 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 52,776,459 - 52,782,964 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 52,812,352 - 52,817,680 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 52,812,351 - 52,817,659 | NCBI | | | | | Celera | 5 | 49,730,217 - 49,735,545 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q11.2 | NCBI | | | | | HuRef | 5 | 49,748,385 - 49,754,428 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 52,779,193 - 52,785,231 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 54,308,436 - 54,314,946 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Fst (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 13 | 114,588,798 - 114,595,522 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 114,588,826 - 114,595,487 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 114,452,262 - 114,458,989 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 114,452,290 - 114,458,951 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 115,242,470 - 115,248,938 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 115,574,219 - 115,579,464 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 118,786,092 - 118,792,681 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | D2.2 | NCBI | | | | | cM Map | 13 | 64.15 | NCBI | | | | |
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Fst (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 2 | 47,856,345 - 47,863,670 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 46,123,260 - 46,130,584 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 46,123,439 - 46,130,571 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 53,226,536 - 53,233,459 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 51,284,901 - 51,291,822 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 46,164,805 - 46,171,742 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 46,537,589 - 46,544,813 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 46,538,700 - 46,544,457 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 65,576,721 - 65,583,918 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 46,542,246 - 46,550,678 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 46,470,478 - 46,478,911 (-) | NCBI | | | | | Celera | 2 | 41,883,386 - 41,889,989 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q14 | NCBI | | | | |
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Fst (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955446 | 13,925,776 - 13,932,104 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955446 | 13,925,833 - 13,932,104 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
FST (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 4 | 60,454,897 - 60,462,481 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 58,608,522 - 58,616,019 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 60,544,495 - 60,550,516 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 62,163,655 - 62,168,218 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
|
FST (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 4 | 61,779,252 - 61,785,666 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 61,779,259 - 61,783,260 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 61,544,683 - 61,551,112 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 62,270,843 - 62,277,297 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 62,271,936 - 62,277,253 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 62,049,664 - 62,056,089 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 62,178,184 - 62,184,600 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 62,695,162 - 62,701,588 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Fst (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 205,054,434 - 205,060,754 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936480 | 13,990,929 - 13,997,248 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936480 | 13,990,967 - 13,997,248 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
FST (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 4 | 49,773,646 - 49,780,343 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 4 | 49,773,980 - 49,780,333 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666082 | 1,343,148 - 1,349,927 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Fst (Heterocephalus glaber - naked mole-rat) |
|