FST (follistatin) - Rat Genome Database

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Gene: FST (follistatin) Sus scrofa
Analyze
Symbol: FST
Name: follistatin
RGD ID: 14232647
Description: ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); BMP signaling pathway (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Brain Hypoxia-Ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (inferred); extracellular region (inferred); nucleus (inferred); INTERACTS WITH zearalenone
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: activin-binding protein; follistatin A; FS
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1632,805,932 - 32,811,421 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11632,806,341 - 32,811,382 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21634,779,040 - 34,784,066 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
zearalenone  (EXP)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:1906804   PMID:3120188   PMID:3153465   PMID:3365249   PMID:8199404   PMID:8340384   PMID:14681463   PMID:17145712   PMID:17177694   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
FST
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1632,805,932 - 32,811,421 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11632,806,341 - 32,811,382 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21634,779,040 - 34,784,066 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FST
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38553,480,629 - 53,487,134 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl553,480,626 - 53,487,134 (+)EnsemblGRCh38hg38GRCh38
GRCh37552,776,459 - 52,782,964 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36552,812,352 - 52,817,680 (+)NCBINCBI36Build 36hg18NCBI36
Build 34552,812,351 - 52,817,659NCBI
Celera549,730,217 - 49,735,545 (+)NCBICelera
Cytogenetic Map5q11.2NCBI
HuRef549,748,385 - 49,754,428 (+)NCBIHuRef
CHM1_1552,779,193 - 52,785,231 (+)NCBICHM1_1
T2T-CHM13v2.0554,308,436 - 54,314,946 (+)NCBIT2T-CHM13v2.0
Fst
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913114,588,798 - 114,595,522 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13114,588,826 - 114,595,487 (-)EnsemblGRCm39 Ensembl
GRCm3813114,452,262 - 114,458,989 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13114,452,290 - 114,458,951 (-)EnsemblGRCm38mm10GRCm38
MGSCv3713115,242,470 - 115,248,938 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613115,574,219 - 115,579,464 (-)NCBIMGSCv36mm8
Celera13118,786,092 - 118,792,681 (-)NCBICelera
Cytogenetic Map13D2.2NCBI
cM Map1364.15NCBI
Fst
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8247,856,345 - 47,863,670 (-)NCBIGRCr8
mRatBN7.2246,123,260 - 46,130,584 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl246,123,439 - 46,130,571 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx253,226,536 - 53,233,459 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0251,284,901 - 51,291,822 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0246,164,805 - 46,171,742 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0246,537,589 - 46,544,813 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl246,538,700 - 46,544,457 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0265,576,721 - 65,583,918 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4246,542,246 - 46,550,678 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1246,470,478 - 46,478,911 (-)NCBI
Celera241,883,386 - 41,889,989 (-)NCBICelera
Cytogenetic Map2q14NCBI
Fst
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544613,925,776 - 13,932,104 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544613,925,833 - 13,932,104 (-)NCBIChiLan1.0ChiLan1.0
FST
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2460,454,897 - 60,462,481 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1558,608,522 - 58,616,019 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0560,544,495 - 60,550,516 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1562,163,655 - 62,168,218 (-)NCBIpanpan1.1PanPan1.1panPan2
FST
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1461,779,252 - 61,785,666 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl461,779,259 - 61,783,260 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha461,544,683 - 61,551,112 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0462,270,843 - 62,277,297 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl462,271,936 - 62,277,253 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1462,049,664 - 62,056,089 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0462,178,184 - 62,184,600 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0462,695,162 - 62,701,588 (-)NCBIUU_Cfam_GSD_1.0
Fst
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213205,054,434 - 205,060,754 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648013,990,929 - 13,997,248 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648013,990,967 - 13,997,248 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FST
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1449,773,646 - 49,780,343 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl449,773,980 - 49,780,333 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660821,343,148 - 1,349,927 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fst
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247595,798,067 - 5,805,254 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247595,799,127 - 5,804,802 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FST
68 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system reproductive system respiratory system
High
Medium
Low 4 2 2 2 2
Below cutoff 4 1 2 6 1

Sequence


RefSeq Acc Id: ENSSSCT00000018397   ⟹   ENSSSCP00000017901
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1632,805,932 - 32,811,421 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000090759   ⟹   ENSSSCP00000069040
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1632,805,932 - 32,811,126 (+)Ensembl
RefSeq Acc Id: NM_001003662   ⟹   NP_001003662
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11632,806,341 - 32,811,382 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001003662   ⟸   NM_001003662
- Peptide Label: precursor
- UniProtKB: P10670 (UniProtKB/Swiss-Prot),   P10669 (UniProtKB/Swiss-Prot),   Q6A1L0 (UniProtKB/TrEMBL),   Q6EUX0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000069040   ⟸   ENSSSCT00000090759
RefSeq Acc Id: ENSSSCP00000017901   ⟸   ENSSSCT00000018397
Protein Domains
Follistatin-like   Kazal-like   TB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000016892 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005044724 UniProtKB/Swiss-Prot
  ENSSSCG00015034381 UniProtKB/Swiss-Prot
  ENSSSCG00025022494 UniProtKB/Swiss-Prot
  ENSSSCG00030023421 UniProtKB/Swiss-Prot
  ENSSSCG00035079239 UniProtKB/Swiss-Prot
  ENSSSCG00040030658 UniProtKB/Swiss-Prot
  ENSSSCG00045027630 UniProtKB/Swiss-Prot
  ENSSSCG00050033092 UniProtKB/Swiss-Prot
  ENSSSCG00055006989 UniProtKB/Swiss-Prot
  ENSSSCG00060031325 UniProtKB/Swiss-Prot
  ENSSSCG00065040871 UniProtKB/Swiss-Prot
  ENSSSCG00070002683 UniProtKB/Swiss-Prot
Ensembl Transcript ENSSSCT00000018397 ENTREZGENE
  ENSSSCT00000018397.5 UniProtKB/TrEMBL
  ENSSSCT00000090759.2 UniProtKB/TrEMBL
  ENSSSCT00005072078.1 UniProtKB/Swiss-Prot
  ENSSSCT00015046401.1 UniProtKB/Swiss-Prot
  ENSSSCT00015046584.1 UniProtKB/Swiss-Prot
  ENSSSCT00025030617.1 UniProtKB/Swiss-Prot
  ENSSSCT00030032510.1 UniProtKB/Swiss-Prot
  ENSSSCT00030032534.1 UniProtKB/Swiss-Prot
  ENSSSCT00035108421.1 UniProtKB/Swiss-Prot
  ENSSSCT00040041296.1 UniProtKB/Swiss-Prot
  ENSSSCT00040041443.1 UniProtKB/Swiss-Prot
  ENSSSCT00045047171.1 UniProtKB/Swiss-Prot
  ENSSSCT00050044398.1 UniProtKB/Swiss-Prot
  ENSSSCT00055013575.1 UniProtKB/Swiss-Prot
  ENSSSCT00060042408.1 UniProtKB/Swiss-Prot
  ENSSSCT00065055893.1 UniProtKB/Swiss-Prot
  ENSSSCT00070005017.1 UniProtKB/Swiss-Prot
  ENSSSCT00070005029.1 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.60.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.290.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Fol_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Follistatin/Osteonectin_EGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kazal_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kazal_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TB_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TB_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:445002 UniProtKB/TrEMBL
NCBI Gene FST ENTREZGENE
PANTHER AGRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FOLLISTATIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FOLN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FST_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kazal_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE KAZAL_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS51364 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FOLN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KAZAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF100895 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57581 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A5G2R4C2_PIG UniProtKB/TrEMBL
  F1SLQ4_PIG UniProtKB/TrEMBL
  FST_PIG UniProtKB/Swiss-Prot, ENTREZGENE
  P10670 ENTREZGENE
  Q6A1L0 ENTREZGENE, UniProtKB/TrEMBL
  Q6EUX0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary P10670 UniProtKB/Swiss-Prot
VGNC ID VGNC:110661 ENTREZGENE