CAT (catalase) - Rat Genome Database

Name: CAT
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: CAT (catalase) Sus scrofa

Analyze

Symbol:

CAT

Name:

catalase

RGD ID:

14103484

Description:

ENCODES a protein that exhibits antioxidant activity (ortholog); catalase activity (ortholog); identical protein binding (ortholog); INVOLVED IN aerobic respiration (ortholog); aging (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; tryptophan metabolic pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acatalasia (ortholog); acne (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog); INTERACTS WITH bisphenol A; cadmium atom; cadmium dichloride

Type:

protein-coding

RefSeq Status:

VALIDATED

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CAT (catalase)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Cat (catalase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cat (catalase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cat (catalase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CAT (catalase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CAT (catalase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cat (catalase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CAT (catalase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cat (catalase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	26,487,653 - 26,581,452 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	26,493,664 - 26,533,881 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	28,860,864 - 28,900,834 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	2	p16-p15	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Abnormalities, Drug-Induced (ISO)

acatalasia (ISO)

acne (ISO)

Acute Lung Injury (ISO)

alcoholic liver cirrhosis (ISO)

allergic rhinitis (ISO)

angle-closure glaucoma (ISO)

aortic disease (ISO)

asphyxia neonatorum (ISO)

asthma (ISO)

autistic disorder (ISO)

background diabetic retinopathy (ISO)

bacterial pneumonia (ISO)

Behcet's disease (ISO)

brain ischemia (ISO)

breast adenocarcinoma (ISO)

Breast Neoplasms (ISO)

Bronchopulmonary Dysplasia (ISO)

calcium oxalate nephrolithiasis (ISO)

cardiomyopathy (ISO)

cataract (ISO)

Chemical and Drug Induced Liver Injury (ISO)

cholestasis (ISO)

Chromosome Breakage (ISO)

Chronic Hepatitis (ISO)

chronic obstructive pulmonary disease (ISO)

chronic venous insufficiency (ISO)

colitis (ISO)

colorectal carcinoma (ISO)

congestive heart failure (ISO)

COVID-19 (ISO)

cutaneous leishmaniasis (ISO)

cystitis (ISO)

diabetes mellitus (ISO)

Diabetic Nephropathies (ISO)

diabetic neuropathy (ISO)

diabetic retinopathy (ISO)

diffuse large B-cell lymphoma (ISO)

dilated cardiomyopathy (ISO)

disease of cellular proliferation (ISO)

Disease Progression (ISO)

Drug-Induced Dyskinesia (ISO)

Edema (ISO)

end stage renal disease (ISO)

essential hypertension (ISO)

Experimental Arthritis (ISO)

Experimental Diabetes Mellitus (ISO)

familial Mediterranean fever (ISO)

fatty liver disease (ISO)

Femur Head Necrosis (ISO)

fetal alcohol spectrum disorder (ISO)

fibromyalgia (ISO)

focal segmental glomerulosclerosis (ISO)

gastric adenocarcinoma (ISO)

gastric ulcer (ISO)

Graves Ophthalmopathy (ISO)

Graves' disease (ISO)

Hashimoto Disease (ISO)

Hearing Loss, Cisplatin-Induced (ISO)

Hearing Loss, Noise-Induced (ISO)

hepatitis (ISO)

hepatocellular carcinoma (ISO)

high grade glioma (ISO)

Human Influenza (ISO)

Huntington's disease (ISO)

Hyperalgesia (ISO)

Hyperemia (ISO)

Hyperhidrosis (ISO)

hypertension (ISO)

hyperthyroidism (ISO)

Hypotension (ISO)

hypothyroidism (ISO)

Hypoxia-Ischemia, Brain (ISO)

Insulin Resistance (ISO)

intellectual disability (ISO)

keratosis (ISO)

Kidney Calculi (ISO)

Left Ventricular Hypertrophy (ISO)

lichen planus (ISO)

lung disease (ISO)

lung non-small cell carcinoma (ISO)

major depressive disorder (ISO)

Marfan syndrome (ISO)

melanoma (ISO)

mental depression (ISO)

Mesothelioma (ISO)

myocardial infarction (ISO)

Myocardial Reperfusion Injury (ISO)

Nasal Polyps (ISO)

Necrosis (ISO)

Neoplasm Invasiveness (ISO)

Neoplasm Metastasis (ISO)

Neoplastic Cell Transformation (ISO)

neovascular inflammatory vitreoretinopathy (ISO)

nephrosis (ISO)

neurodegenerative disease (ISO)

newborn respiratory distress syndrome (ISO)

non-alcoholic fatty liver disease (ISO)

optic neuritis (ISO)

otitis media (ISO)

pancreatic cancer (ISO)

pemphigus (ISO)

Perennial Allergic Rhinitis (ISO)

phenylketonuria (ISO)

phobic disorder (ISO)

pleurisy (ISO)

pneumoconiosis (ISO)

Postmenopausal Osteoporosis (ISO)

pre-malignant neoplasm (ISO)

Prehypertension (ISO)

Premature Birth (ISO)

Presbycusis (ISO)

proliferative diabetic retinopathy (ISO)

Protein Deficiency (ISO)

pseudoxanthoma elasticum (ISO)

psoriasis (ISO)

pterygium (ISO)

pulmonary edema (ISO)

pulmonary embolism (ISO)

pulmonary fibrosis (ISO)

Raynaud disease (ISO)

Renoprival Hypertension (ISO)

Reperfusion Injury (ISO)

Retina Reperfusion Injury (ISO)

retinal disease (ISO)

retinitis pigmentosa (ISO)

rheumatoid arthritis (ISO)

rhinitis (ISO)

scabies (ISO)

sciatic neuropathy (ISO)

seborrheic dermatitis (ISO)

senile cataract (ISO)

sensorineural hearing loss (ISO)

Sepsis (ISO)

Skin Neoplasms (ISO)

status epilepticus (ISO)

stomatitis (ISO)

systemic lupus erythematosus (ISO)

thyroid gland papillary carcinoma (ISO)

toxic encephalopathy (ISO)

Turner syndrome (ISO)

tympanosclerosis (ISO)

type 1 diabetes mellitus (ISO)

type 2 diabetes mellitus (ISO)

Ureteral Calculi (ISO)

ureteral obstruction (ISO)

Viral Bronchiolitis (ISO)

visual epilepsy (ISO)

vitiligo (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

bisphenol A (EXP)

cadmium atom (EXP)

cadmium dichloride (EXP)

carbon monoxide (EXP)

cefaloridine (EXP)

choline (EXP)

clofibrate (EXP)

cyanocob(III)alamin (EXP)

diquat (EXP)

folic acid (EXP)

gamma-hexachlorocyclohexane (EXP)

glycine betaine (EXP)

glyphosate (EXP)

hydrogen peroxide (EXP)

hypoxanthine (EXP)

malathion (EXP)

malonaldehyde (EXP)

melatonin (EXP)

ochratoxin A (EXP)

p-xylene (EXP)

paraquat (EXP)

toluene (EXP)

zearalenone (EXP)

zinc atom (EXP)

zinc(0) (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

aerobic respiration (IEA,ISO)

aging (ISO)

cellular oxidant detoxification (IEA)

cellular response to growth factor stimulus (ISO)

cholesterol metabolic process (IEA,ISO)

hemoglobin metabolic process (IEA,ISO)

hydrogen peroxide catabolic process (IBA,IEA,ISO)

kidney development (ISO)

negative regulation of apoptotic process (IEA,ISO)

negative regulation of NF-kappaB transcription factor activity (IEA,ISO)

positive regulation of cell division (IEA)

positive regulation of NF-kappaB transcription factor activity (IEA,ISO)

positive regulation of phosphatidylinositol 3-kinase signaling (IEA,ISO)

response to activity (ISO)

response to auditory stimulus (ISO)

response to cadmium ion (ISO)

response to estradiol (ISO)

response to ethanol (ISO)

response to fatty acid (ISO)

response to hydrogen peroxide (IBA)

response to hyperoxia (ISO)

response to hypoxia (ISO)

response to inactivity (ISO)

response to insulin (ISO)

response to L-ascorbic acid (ISO)

response to lead ion (ISO)

response to light intensity (ISO)

response to oxidative stress (IEA,ISO)

response to ozone (ISO)

response to phenylpropanoid (ISO)

response to radiation (ISO)

response to reactive oxygen species (IEA,ISO)

response to toxic substance (ISO)

response to UV (ISO)

response to vitamin A (ISO)

response to vitamin E (ISO)

response to xenobiotic stimulus (ISO)

triglyceride metabolic process (IEA,ISO)

ureteric bud development (ISO)

UV protection (IEA)

Cellular Component

cytoplasm (IBA)

cytosol (ISO)

endoplasmic reticulum (ISO)

extracellular space (ISO)

Golgi apparatus (ISO)

intracellular membrane-bounded organelle (ISO)

lysosome (ISO)

mitochondrial intermembrane space (ISO)

mitochondrion (IBA)

peroxisomal membrane (IEA)

peroxisome (IBA,IEA)

plasma membrane (ISO)

protein-containing complex (IEA)

Molecular Function

aminoacylase activity (IEA)

antioxidant activity (ISO)

catalase activity (IBA,IEA,ISO)

enzyme binding (IEA)

heme binding (IBA,IEA)

identical protein binding (ISO)

metal ion binding (IEA)

NADP binding (IEA)

oxidoreductase activity, acting on peroxide as acceptor (ISO)

peroxisome targeting sequence binding (IEA)

protein homodimerization activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

disulfiram pharmacodynamics pathway (ISO)

tryptophan metabolic pathway (ISO)

References

Additional References at PubMed

PMID:7592879	PMID:9475954	PMID:14681463	PMID:17145712	PMID:17407547	PMID:19786062

Genomics

Comparative Map Data

CAT
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	26,487,653 - 26,581,452 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	26,493,664 - 26,533,881 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	28,860,864 - 28,900,834 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	2	p16-p15	NCBI

CAT
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	11	34,438,934 - 34,472,060 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	11	34,438,934 - 34,472,060 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	11	34,460,481 - 34,493,607 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	34,417,054 - 34,450,183 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	11	34,417,053 - 34,450,179	NCBI
Celera	11	34,607,658 - 34,640,793 (+)	NCBI
Cytogenetic Map	11	p13	NCBI
HuRef	11	34,157,829 - 34,190,968 (+)	NCBI		HuRef
CHM1_1	11	34,459,461 - 34,492,601 (+)	NCBI		CHM1_1

Cat
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	103,284,249 - 103,315,498 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	2	103,284,194 - 103,315,505 (-)	Ensembl
GRCm38	2	103,453,904 - 103,485,153 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	103,453,849 - 103,485,160 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	103,294,061 - 103,325,310 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	2	103,254,842 - 103,285,959 (-)	NCBI			mm8
Celera	2	104,700,510 - 104,731,525 (-)	NCBI		Celera
Cytogenetic Map	2	E2	NCBI
cM Map	2	54.43	NCBI

Cat
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	89,842,393 - 89,874,577 (-)	NCBI	mRatBN7.2
mRatBN7.2 Ensembl	3	89,842,399 - 89,874,478 (-)	Ensembl
Rnor_6.0	3	93,379,872 - 93,412,058 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	93,379,874 - 93,412,058 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	100,021,857 - 100,054,043 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	88,654,077 - 88,686,212 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	3	88,550,504 - 88,582,640 (+)	NCBI
Celera	3	88,911,241 - 88,943,392 (-)	NCBI		Celera
RH 3.4 Map	3	718.62	RGD
Cytogenetic Map	3	q32	NCBI

Cat
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	11,781,835 - 11,827,464 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	11,783,973 - 11,826,970 (-)	NCBI	ChiLan1.0	ChiLan1.0

CAT
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	11	34,289,603 - 34,323,160 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	34,289,603 - 34,323,160 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	11	34,413,253 - 34,446,831 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

CAT
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	33,383,005 - 33,422,447 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	33,383,005 - 33,422,447 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	32,988,826 - 33,028,342 (-)	NCBI
ROS_Cfam_1.0	18	33,993,703 - 34,033,703 (-)	NCBI
UMICH_Zoey_3.1	18	33,553,399 - 33,593,082 (-)	NCBI
UNSW_CanFamBas_1.0	18	33,145,251 - 33,185,159 (-)	NCBI
UU_Cfam_GSD_1.0	18	33,780,645 - 33,820,629 (-)	NCBI

Cat
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	30,476,191 - 30,512,340 (-)	NCBI
SpeTri2.0	NW_004936533	3,601,270 - 3,637,128 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CAT
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	30,792,533 - 30,828,920 (-)	NCBI
ChlSab1.1 Ensembl	1	30,792,399 - 30,829,592 (-)	Ensembl
Vero_WHO_p1.0	NW_023666038	127,903,025 - 127,939,181 (-)	NCBI

Cat
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624767	12,680,940 - 12,715,468 (-)	NCBI

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	10	4	3	5	2	23	2	3	3
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_214301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021081498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK349911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK392670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU582930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU928984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D89812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB786395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB796229	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EW193838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FS670807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01032289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSSSCT00000014528 ⟹ ENSSSCP00000014135

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	26,487,653 - 26,581,452 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000049964 ⟹ ENSSSCP00000038066

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	26,493,667 - 26,533,863 (-)	Ensembl

RefSeq Acc Id:

NM_214301 ⟹ NP_999466

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	26,493,665 - 26,533,881 (-)	NCBI

Sequence:

show sequence

ACGAGGAGGCGGGGCTGAGTGGCTGAGTCCGAAGTCGTCTACTTCAGGCGCAGGGCCGGAGACC
GGCGAGTGGAGGCTGCCTGCAACGTTCTGTAAGGCTAGTCGGACACCATGGCGGACAACCGGGA
TCCAGCCAGTGACCAGATGAAGCATTGGAAGGAGCAGCGGGCCGCGCAGAAACCTGATATCCTG
ACCACCGGCTCTGGGAATCCGATAGGAGACAAACTCAATATTCTGACAGCAGGGCCCCGAGGGC
CCCTTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCACTTTGACCGGGAGAGAATTCC
TGAGAGAGTTGTGCATGCCAAAGGAGCAGGGGCTTTTGGCTACTTTGAGGTCACACACGACATT
ACCAGATTCTCGAAGGCGAAGGTGTTTGAGCACGTTGGAAAGAGGACACCCATTGCAGTTCGTT
TCTCCACCGTTGCTGGAGAATCGGGCTCAGCTGACACAGTTCGTGACCCTCGTGGGTTTGCAGT
GAAATTTTACACAGAGGATGGTAATTGGGATCTCGTTGGAAATAATACCCCTATTTTCTTCATC
AGAGATGCCATATTGTTTCCATCCTTTATCCACAGCCAAAAGAGAAACCCTCAGACACACCTGA
AGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCCTT
CCTGTTCAGCGATCGAGGGATTCCAGATGGACACAGGCACATGAACGGATATGGATCGCACACT
TTCAAGCTGGTTAATGAGAAGGGAGAGGCGGTTTATTGCAAATTCCATTATAAGACTGACCAGG
GCATCAAAAACCTTTCCGTTGAAGATGCAGCAAGACTTTCCCAGGAAGATCCTGACTATGGCAT
CCGGGACCTTTTTAATGCCATTGCCACCGGCAACTATCCCTCCTGGACTTTTTACATCCAGGTC
ATGACATTTCAGGAGGCAGAAGCTTTTCCATTTAATCCTTTTGATCTTACCAAGGTTTGGCCTC
ACAGCGAATACCCTCTTATCCCAGTTGGTAAACTGGTCTTAAACCGGAATCCAGTTAATTATTT
TGCTGAGGTTGAACAGATGGCCTTTGACCCGAGCAACATGCCACCCGGCATTGAGCCCAGCCCT
GACAAGATGCTGCAGGGCCGCCTATTTGCCTATCCTGACACTCACCGCCACCGCCTGGGGCCCA
ACTATCTTCAGATACCTGTGAACTGTCCCTTCCGTGCTAGGGTGGCCAACTACCAGCGTGATGG
CCCCATGTGCTTTCAGGACAATCAAGGTGGGGCTCCAAATTACTACCCCAACAGCTTTAGTGCT
CCCGAACAGACGCATTCGGCCTTGGAACATTGTACCCGCTATTCTGGGGACGTGCAGCGCTTCA
ACAGTGCCAACGAAGATAATGTCACCCAGGTGCGGACTTTCTATTTGAACGTACTGAATGAGGA
GGAGAGGAAACGCCTGTGTGAGAACATTGCGGGTCATCTGAAAGACGCACAACTGTTCATCCAG
AAGAAAGCGGTCAAGAACTTCAGTGACGTCCATCCGGACTATGGGGCCCGCATTCAGGCTCTTC
TGGACAAATACAATGCTGAGAAACCAAAGAATGCAGTTCACACCTATGTGCAGGCTGGATCTCA
CTTGGCTGCAAGGGAGAAAGCTAACCTGTGAGGGTCGGGGGCCCTGATCCTGCACCAAGTTGCC
GTCTGCCTCTGAAGCAAAACATGGAATTCACACACATACCCATTCGTCACTGGATGCAAGATTC
TCCTGTGCTAGACATGCAAATGCAAGCTTCTGTCTGTAAAATGATAATCCAGGTTTCTGTAGCA
AATAATGCAATAATGGCTTTGAATGCTACTTTCCTAGGGGTAAGTGAAGGTTAGGGCTGAACAG
TCATTTAAAGGGAATGTGTATTTGCCTTTGACAGTTGATTATTCACTTAAAACAACCAGAGTGA
AAATTTCTAGCAGATATATGATTTTATTTGATAAGAAAAAACCTTGGCAAAATGAATATCTTTA
CATTATCATCTCGTGAACTATTATATAAAAATATGGCCATAATTATATAAGAAGAAAAGATGAA
AATAATCCACTCAGAAATTTTGATTTTTCCAAGTTCCATATAGGAAAAATATACCTAATGCTTT
GGGGTCTTTTGAAAATAACTTCAGTACCATCATGACTTAATGTTTAATCCTGCTTGGAACTGAT
GAGATTTTTTAAAACTGGGAATTACATTTATGCTAATACAGCATTGATTTTTGCAACAGACTGA
TTTGTAATTGCTTACATTTTTACAATAAAATAATCTGCACTTAAAAATAAAAAAAAAAAAAAAA
AAAAA

hide sequence

RefSeq Acc Id:

XM_021081498 ⟹ XP_020937157

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	26,493,664 - 26,533,415 (-)	NCBI

Sequence:

show sequence

CGGGAGTGAAGGCTCATGGGGAAAGAGGCAGAGAGCTGCAGCTGCAAGAAAGGAAGCGAGGGGG
GAAGTGGGAACGGTTCCAGCTTTGCCCTTGCACAAACAAAACCTGATATCCTGACCACCGGCTC
TGGGAATCCGATAGGAGACAAACTCAATATTCTGACAGCAGGGCCCCGAGGGCCCCTTCTTGTT
CAGGATGTGGTTTTCACTGATGAAATGGCTCACTTTGACCGGGAGAGAATTCCTGAGAGAGTTG
TGCATGCCAAAGGAGCAGGGGCTTTTGGCTACTTTGAGGTCACACACGACATTACCAGATTCTC
GAAGGCGAAGGTGTTTGAGCACGTTGGAAAGAGGACACCCATTGCAGTTCGTTTCTCCACCGTT
GCTGGAGAATCGGGCTCAGCTGACACAGTTCGTGACCCTCGTGGGTTTGCAGTGAAATTTTACA
CAGAGGATGGTAATTGGGATCTCGTTGGAAATAATACCCCTATTTTCTTCATCAGAGATGCCAT
ATTGTTTCCATCCTTTATCCACAGCCAAAAGAGAAACCCTCAGACACACCTGAAGGATCCGGAC
ATGGTCTGGGACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCCTTCCTGTTCAGCG
ATCGAGGGATTCCAGATGGACACAGGCACATGAACGGATATGGATCGCACACTTTCAAGCTGGT
TAATGAGAAGGGAGAGGCGGTTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAAAC
CTTTCCGTTGAAGATGCAGCAAGACTTTCCCAGGAAGATCCTGACTATGGCATCCGGGACCTTT
TTAATGCCATTGCCACCGGCAACTATCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTCA
GGAGGCAGAAGCTTTTCCATTTAATCCTTTTGATCTTACCAAGGTTTGGCCTCACAGCGAATAC
CCTCTTATCCCAGTTGGTAAACTGGTCTTAAACCGGAATCCAGTTAATTATTTTGCTGAGGTTG
AACAGATGGCCTTTGACCCGAGCAACATGCCACCCGGCATTGAGCCCAGCCCTGACAAGATGCT
GCAGGGCCGCCTATTTGCCTATCCTGACACTCACCGCCACCGCCTGGGGCCCAACTATCTTCAG
ATACCTGTGAACTGTCCCTTCCGTGCTAGGGTGGCCAACTACCAGCGTGATGGCCCCATGTGCT
TTCAGGACAATCAAGGTGGGGCTCCAAATTACTACCCCAACAGCTTTAGTGCTCCCGAACAGAC
GCATTCGGCCTTGGAACATTGTACCCGCTATTCTGGGGACGTGCAGCGCTTCAACAGTGCCAAC
GAAGATAATGTCACCCAGGTGCGGACTTTCTATTTGAACGTACTGAATGAGGAGGAGAGGAAAC
GCCTGTGTGAGAACATTGCGGGTCATCTGAAAGACGCACAACTGTTCATCCAGAAGAAAGCGGT
CAAGAACTTCAGTGACGTCCATCCGGACTATGGGGCCCGCATTCAGGCTCTTCTGGACAAATAC
AATGCTGAGAAACCAAAGAATGCAGTTCACACCTATGTGCAGGCTGGATCTCACTTGGCTGCAA
GGGAGAAAGCTAACCTGTGAGGGTCGGGGGCCCTGATCCTGCACCAAGTTGCCGTCTGCCTCTG
AAGCAAAACATGGAATTCACACACATACCCATTCGTCACTGGATGCAAGATTCTCCTGTGCTAG
ACATGCAAATGCAAGCTTCTGTCTGTAAAATGATAATCCAGGTTTCTGTAGCAAATAATGCAAT
AATGGCTTTGAATGCTACTTTCCTAGGGGTAAGTGAAGGTTAGGGCTGAACAGTCATTTAAAGG
GAATGTGTATTTGCCTTTGACAGTTGATTATTCACTTAAAACAACCAGAGTGAAAATTTCTAGC
AGATATATGATTTTATTTGATAAGAAAAAACCTTGGCAAAATGAATATCTTTACATTATCATCT
CGTGAACTATTATATAAAAATATGGCCATAATTATATAAGAAGAAAAGATGAAAATAATCCACT
CAGAAATTTTGATTTTTCCAAGTTCCATATAGGAAAAATATACCTAATGCTTTGGGGTCTTTTG
AAAATAACTTCAGTACCATCATGACTTAATGTTTAATCCTGCTTGGAACTGATGAGATTTTTTA
AAACTGGGAATTACATTTATGCTAATACAGCATTGATTTTTGCAACAGACTGATTTGTAATTGC
TTACATTTTTACAATAAAATAATCTGCACTTAAAAATAG

hide sequence

Protein Sequences


Protein RefSeqs	NP_999466	(Get FASTA)	NCBI Sequence Viewer
	XP_020937157	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA25301	(Get FASTA)	NCBI Sequence Viewer
	O62839	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_020937157 ⟸ XM_021081498

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGKEAESCSCKKGSEGGSGNGSSFALAQTKPDILTTGSGNPIGDKLNILTAGPRGPLLVQDVVF
TDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRFSKAKVFEHVGKRTPIAVRFSTVAGESG
SADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDF
WSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNEKGEAVYCKFHYKTDQGIKNLSVED
AARLSQEDPDYGIRDLFNAIATGNYPSWTFYIQVMTFQEAEAFPFNPFDLTKVWPHSEYPLIPV
GKLVLNRNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVNC
PFRARVANYQRDGPMCFQDNQGGAPNYYPNSFSAPEQTHSALEHCTRYSGDVQRFNSANEDNVT
QVRTFYLNVLNEEERKRLCENIAGHLKDAQLFIQKKAVKNFSDVHPDYGARIQALLDKYNAEKP
KNAVHTYVQAGSHLAAREKANL

hide sequence

RefSeq Acc Id:

NP_999466 ⟸ NM_214301

- UniProtKB:

O62839 (UniProtKB/Swiss-Prot), A0A286ZSG3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADNRDPASDQMKHWKEQRAAQKPDILTTGSGNPIGDKLNILTAGPRGPLLVQDVVFTDEMAHF
DRERIPERVVHAKGAGAFGYFEVTHDITRFSKAKVFEHVGKRTPIAVRFSTVAGESGSADTVRD
PRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPES
LHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNEKGEAVYCKFHYKTDQGIKNLSVEDAARLSQE
DPDYGIRDLFNAIATGNYPSWTFYIQVMTFQEAEAFPFNPFDLTKVWPHSEYPLIPVGKLVLNR
NPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVNCPFRARVA
NYQRDGPMCFQDNQGGAPNYYPNSFSAPEQTHSALEHCTRYSGDVQRFNSANEDNVTQVRTFYL
NVLNEEERKRLCENIAGHLKDAQLFIQKKAVKNFSDVHPDYGARIQALLDKYNAEKPKNAVHTY
VQAGSHLAAREKANL

hide sequence

RefSeq Acc Id:

ENSSSCP00000038066 ⟸ ENSSSCT00000049964

RefSeq Acc Id:

ENSSSCP00000014135 ⟸ ENSSSCT00000014528

Protein Domains

Catalase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013302	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00070003335	UniProtKB/TrEMBL
Ensembl Protein	ENSSSCP00000014135	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000038066	UniProtKB/TrEMBL
	ENSSSCP00070005124	UniProtKB/TrEMBL
	ENSSSCP00070005144	UniProtKB/TrEMBL
	ENSSSCP00070005156	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000014528	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00000049964	UniProtKB/TrEMBL
	ENSSSCT00070006294	UniProtKB/TrEMBL
	ENSSSCT00070006315	UniProtKB/TrEMBL
	ENSSSCT00070006328	UniProtKB/TrEMBL
Gene3D-CATH	2.40.180.10	UniProtKB/TrEMBL
InterPro	Catalase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Catalase_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Catalase_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Catalase_clade1/3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Catalase_core	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Catalase_core_sf	UniProtKB/TrEMBL
	Catalase_haem_BS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Catalase_immune_responsive	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Catalase_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	ssc:397568	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	CAT	ENTREZGENE
PANTHER	PTHR11465	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Catalase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Catalase-rel	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PIRSF	Catalase_clade1-3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	CATALASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	CATALASE_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CATALASE_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CATALASE_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	Catalase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF56634	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A286ZSG3	ENTREZGENE
	A0A287A2C3_PIG	UniProtKB/TrEMBL
	A0A4X1SSG2_PIG	UniProtKB/TrEMBL
	A0A4X1SSN8_PIG	UniProtKB/TrEMBL
	A0A4X1SSR6_PIG	UniProtKB/TrEMBL
	CATA_PIG	UniProtKB/Swiss-Prot
	F1SGS9_PIG	UniProtKB/TrEMBL
	O62839	ENTREZGENE
UniProt Secondary	Q9TR38	UniProtKB/Swiss-Prot
	Q9TR39	UniProtKB/Swiss-Prot
VGNC ID	VGNC:86208	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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