CCL2 (chemokine (C-C motif) ligand 2) - Rat Genome Database

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Gene: CCL2 (chemokine (C-C motif) ligand 2) Sus scrofa
Analyze
Symbol: CCL2
Name: chemokine (C-C motif) ligand 2
RGD ID: 14056892
Description: ENCODES a protein that exhibits CCR2 chemokine receptor binding (ortholog); chemoattractant activity (ortholog); chemokine activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to ATP (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN angiotensin II signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Anterior Uveitis (ortholog); Acute Liver Failure (ortholog); FOUND IN axon terminus (ortholog); C-fiber (ortholog); dendrite (ortholog); INTERACTS WITH (-)-epigallocatechin 3-gallate; 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C-C motif chemokine 2; MCP-1; monocyte chemoattractant protein 1; monocyte chemotactic protein 1; small-inducible cytokine A2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1240,798,109 - 40,800,026 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11240,798,109 - 40,800,013 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21242,514,202 - 42,516,108 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 290 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
CCL2Pigabdominal aortic aneurysm  ISOCcl2 (Rattus norvegicus)9068941protein:increased expression:aortaRGDPMID:18482727 and REF_RGD_ID:2307015
CCL2PigAcute Anterior Uveitis severityISOCCL2 (Homo sapiens)9068941protein:increased expression:aqueous humor (human)RGDPMID:9426952 and REF_RGD_ID:8549479
CCL2PigAcute Liver Failure  ISOCCL2 (Homo sapiens)9068941mRNA:increased expression:liver (human)RGDPMID:8283136 and REF_RGD_ID:8549567
CCL2PigAcute Liver Failure  ISOCCL2 (Homo sapiens)9068941protein more ...RGDPMID:12579535 and REF_RGD_ID:14995451
CCL2PigAcute Lung Injury  ISOCcl2 (Rattus norvegicus)9068941mRNA and protein:increased expression:lungRGDPMID:21767135 and REF_RGD_ID:6480432
CCL2Pigacute myeloid leukemia  ISOCCL2 (Homo sapiens)9068941protein:increased expression:plasma (human)RGDPMID:17822317 and REF_RGD_ID:11528537
CCL2Pigacute myeloid leukemia treatmentISOCcl2 (Mus musculus)9068941 RGDPMID:25382729 and REF_RGD_ID:11528532
CCL2Pigacute necrotizing pancreatitis severityISOCcl2 (Rattus norvegicus)9068941mRNA:increased expression:pancreasRGDPMID:18642776 and REF_RGD_ID:2307010
CCL2Pigacute necrotizing pancreatitis treatmentISOCcl2 (Rattus norvegicus)9068941 RGDPMID:19050604 and REF_RGD_ID:11062108
CCL2PigAcute-On-Chronic Liver Failure  ISOCCL2 (Homo sapiens)9068941protein:increased expression:serum:RGDPMID:19247846 and REF_RGD_ID:14995923
CCL2Pigaggressive periodontitis susceptibilityISOCCL2 (Homo sapiens)9068941DNA:polymorphism and haplotype::2518A>G(human) RGDPMID:21264360 and REF_RGD_ID:8661707
CCL2Pigalcoholic hepatitis  ISOCcl2 (Mus musculus)9068941 RGDPMID:21826694 and REF_RGD_ID:14995491
CCL2Pigalcoholic hepatitis severityISOCCL2 (Homo sapiens)9068941 RGDPMID:10446112 and REF_RGD_ID:14995467
CCL2Pigalcoholic hepatitis  ISOCCL2 (Homo sapiens)9068941RNA:increased expression:liver:RGDPMID:24429361 and REF_RGD_ID:14975280
CCL2Pigallergic conjunctivitis  ISOCcl2 (Mus musculus)9068941 RGDPMID:19553621 and REF_RGD_ID:8548840
CCL2Piganemia treatmentISOCcl2 (Mus musculus)9068941associated with Colonic NeoplasmsRGDPMID:24963216 and REF_RGD_ID:11528557
CCL2PigAnimal Hepatitis treatmentISOCcl2 (Mus musculus)9068941 RGDPMID:27980102 and REF_RGD_ID:14995459
CCL2Piganterior uveitis  ISOCCL2 (Homo sapiens)9068941DNA:polymorphism:promoter:rs1024610 (human)RGDPMID:16950632 and REF_RGD_ID:8661673
CCL2Piganterior uveitis susceptibilityISOCCL2 (Homo sapiens)9068941DNA:snp:promoter:g.-2518A>G (human)RGDPMID:16280979 and REF_RGD_ID:8548843
CCL2Piganterior uveitis  ISOCcl2 (Rattus norvegicus)9068941associated with Encephalomyelitis more ...RGDPMID:9404715 and REF_RGD_ID:8549473
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Original Reference(s)
CCL2Pigcoronary artery disease  ISOCCL2 (Homo sapiens)8554872ClinVar Annotator: match by term: Coronary artery disease and modifier ofClinVarPMID:11500196 more ...
CCL2PigCoronary Artery Disease, Development of, in HIV  ISOCCL2 (Homo sapiens)8554872ClinVar Annotator: match by term: Coronary artery disease more ...ClinVarPMID:11500196 more ...
CCL2Pighuman immunodeficiency virus infectious disease  ISOCCL2 (Homo sapiens)8554872ClinVar Annotator: match by term: Human immunodeficiency virus type 1 and susceptibility toClinVarPMID:14571188
CCL2PigNeurodevelopmental Disorders  ISOCCL2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
CCL2Pigspina bifida  ISOCCL2 (Homo sapiens)8554872ClinVar Annotator: match by term: Spina bifida and susceptibility toClinVarPMID:11500196 more ...
CCL2Pigtuberculosis  ISOCCL2 (Homo sapiens)8554872ClinVar Annotator: match by term: Mycobacterium tuberculosis and susceptibility toClinVarPMID:11500196 more ...
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Original Reference(s)
CCL2Pigadult respiratory distress syndrome  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:25070658
CCL2Pigallergic disease  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15585374 and PMID:21625544
CCL2Pigasthma  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:19373627
CCL2Pigatherosclerosis  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:12677255 more ...
CCL2Pigautoimmune hepatitis  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21227906
CCL2PigBrain Injuries  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21549006
CCL2Pigbrain ischemia  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15829914 and PMID:17394460
CCL2PigBronchial Hyperreactivity  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:12388339
CCL2Pigcalcinosis  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21193197 and PMID:21335463
CCL2PigCardiotoxicity  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29959987
CCL2Pigcardiovascular system disease  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:16332659
CCL2Pigcarotid artery disease  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18022660
CCL2PigChemical and Drug Induced Liver Injury  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:20623750
CCL2Pigchronic obstructive pulmonary disease  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:34652871
CCL2Pigcongenital diaphragmatic hernia  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:30418988
CCL2Pigcongestive heart failure  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29959987
CCL2PigCoronavirus infectious disease  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:20484496
CCL2PigCOVID-19  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:31986264
CCL2PigCrohn's disease  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21829567
CCL2Pigcutaneous leishmaniasis  ISOCCL2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:20102417
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Original Reference(s)
CCL2Pigage related macular degeneration  ISOCcl2 (Mus musculus)9068941 MouseDO 

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Original Reference(s)
CCL2Pig(-)-epigallocatechin 3-gallate multiple interactionsEXP 6480464epigallocatechin gallate inhibits the reaction [3 more ...CTDPMID:20580034 more ...
CCL2Pig(-)-epigallocatechin 3-gallate decreases expressionEXP 6480464epigallocatechin gallate results in decreased expression of CCL2 mRNACTDPMID:22521609
CCL2Pig2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of CCL2 mRNACTDPMID:19265715
CCL2Pig3,3',4,4',5-pentachlorobiphenyl increases expressionEXP 64804643 more ...CTDPMID:19265715 and PMID:22521609
CCL2Pig3,3',4,4',5-pentachlorobiphenyl multiple interactionsEXP 6480464CAV1 mutant form inhibits the reaction [3 more ...CTDPMID:19265715 and PMID:22521609
CCL2Pig3,3',4,4'-tetrachlorobiphenyl increases secretionEXP 64804643 more ...CTDPMID:19265715
CCL2Pig3,3',4,4'-tetrachlorobiphenyl increases expressionEXP 64804643 more ...CTDPMID:19265715 and PMID:21130106
CCL2Pig3,3',4,4'-tetrachlorobiphenyl multiple interactionsEXP 6480464[2 more ...CTDPMID:19265715 and PMID:21130106
CCL2Pigall-trans-retinoic acid multiple interactionsEXP 6480464Tretinoin promotes the reaction [3 more ...CTDPMID:21130106
CCL2Pigalpha-naphthoflavone multiple interactionsEXP 6480464alpha-naphthoflavone inhibits the reaction [3 more ...CTDPMID:19265715
CCL2Piganthra[1,9-cd]pyrazol-6(2H)-one decreases expressionEXP 6480464pyrazolanthrone results in decreased expression of CCL2 mRNACTDPMID:21176401 and PMID:23380242
CCL2Piganthra[1,9-cd]pyrazol-6(2H)-one multiple interactionsEXP 6480464pyrazolanthrone inhibits the reaction [3 more ...CTDPMID:19265715 and PMID:23380242
CCL2Pigapocynin decreases expressionEXP 6480464acetovanillone results in decreased expression of CCL2 mRNACTDPMID:23380242
CCL2Pigapocynin multiple interactionsEXP 6480464acetovanillone inhibits the reaction [titanium dioxide results in increased expression of CCL2 mRNA]CTDPMID:23380242
CCL2Pigbis(2-chloroethyl) sulfide increases expressionEXP 6480464Mustard Gas results in increased expression of CCL2 mRNACTDPMID:18988085 and PMID:27617619
CCL2Pigcadmium atom multiple interactionsEXP 6480464[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of CCL2 mRNACTDPMID:34416349
CCL2Pigcadmium dichloride multiple interactionsEXP 6480464[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of CCL2 mRNACTDPMID:34416349
CCL2Pigdeoxynivalenol increases expressionEXP 6480464deoxynivalenol results in increased expression of CCL2 mRNACTDPMID:23688591
CCL2Pigdeoxynivalenol multiple interactionsEXP 6480464[deoxynivalenol co-treated with fumonisin B1] results in increased expression of CCL2 mRNA more ...CTDPMID:23688591 and PMID:30708112
CCL2Pigdeoxynivalenol decreases expressionEXP 6480464deoxynivalenol results in decreased expression of CCL2 mRNACTDPMID:23688591

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Biological Process
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Original Reference(s)
CCL2Piganimal organ regeneration  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:19420110 and REF_RGD_ID:2306994
CCL2Pigantimicrobial humoral immune response mediated by antimicrobial peptide involved_inIBAPANTHER:PTN000245709 more ...150520179 GO_CentralGO_REF:0000033
CCL2Pigastrocyte cell migration involved_inIEAUniProtKB:P13500 and ensembl:ENSP00000225831150520179 EnsemblGO_REF:0000107
CCL2Pigcell chemotaxis involved_inIEAGO:0008009150520179 GOCGO_REF:0000108
CCL2Pigcellular response to ATP  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:19125410 and REF_RGD_ID:8549571
CCL2Pigcellular response to dexamethasone stimulus  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:14512159 and REF_RGD_ID:8548859
CCL2Pigcellular response to estradiol stimulus  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:17237237 and REF_RGD_ID:11526151
CCL2Pigcellular response to fatty acid  ISOCcl2 (Rattus norvegicus)9068941leukotriene B4RGDPMID:14656734 and REF_RGD_ID:11526147
CCL2Pigcellular response to fibroblast growth factor stimulus involved_inIEAUniProtKB:P13500 and ensembl:ENSP00000225831150520179 EnsemblGO_REF:0000107
CCL2Pigcellular response to glucose stimulus  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:26222724 and REF_RGD_ID:11528562
CCL2Pigcellular response to high density lipoprotein particle stimulus  ISOCcl2 (Rattus norvegicus)9068941thrombin-stimulated vascular smooth muscle cellsRGDPMID:18483405 and REF_RGD_ID:8549650
CCL2Pigcellular response to insulin stimulus  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:17180354 and REF_RGD_ID:8549642
CCL2Pigcellular response to interleukin-1  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:14512159 and REF_RGD_ID:8548859
CCL2Pigcellular response to interleukin-1 involved_inIEAUniProtKB:P13500 and ensembl:ENSP00000225831150520179 EnsemblGO_REF:0000107
CCL2Pigcellular response to interleukin-6  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:8921263 and REF_RGD_ID:8549522
CCL2Pigcellular response to lipopolysaccharide  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:8921263 and REF_RGD_ID:8549522
CCL2Pigcellular response to lipopolysaccharide involved_inISOCcl2 (Mus musculus)9068941 PMID:14662900BHF-UCLPMID:14662900
CCL2Pigcellular response to lipoprotein particle stimulus  ISOCcl2 (Rattus norvegicus)9068941lipoprotein-XRGDPMID:11473635 and REF_RGD_ID:8549581
CCL2Pigcellular response to macrophage colony-stimulating factor stimulus  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:8921263 and REF_RGD_ID:8549522
CCL2Pigcellular response to platelet-derived growth factor stimulus  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:7589574 and REF_RGD_ID:8549588
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Cellular Component
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Molecular Function
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Original Reference(s)
CCL2PigCCR chemokine receptor binding enablesIBAMGI:108224 more ...150520179 GO_CentralGO_REF:0000033
CCL2PigCCR2 chemokine receptor binding enablesISOUniProtKB:P516839068941 PMID:8662823BHF-UCLPMID:8662823
CCL2Pigchemoattractant activity enablesISOCcl2 (Mus musculus)9068941 PMID:19164781BHF-UCLPMID:19164781
CCL2Pigchemokine activity  ISOCcl2 (Rattus norvegicus)9068941 RGDPMID:11104723 more ...
CCL2Pigchemokine activity enablesIBAMGI:104593 more ...150520179 GO_CentralGO_REF:0000033
CCL2Pigchemokine activity enablesIEAInterPro:IPR000827 more ...150520179 InterProGO_REF:0000002
CCL2Pigcytokine activity enablesIEAUniProtKB-KW:KW-0202150520179 UniProtGO_REF:0000043
CCL2PigG protein-coupled receptor binding enablesISOCcl2 (Mus musculus)9068941 PMID:8631787 and PMID:9366570MGIPMID:8631787 and PMID:9366570
CCL2Pigheparin binding  ISOheparin9068941 RGDPMID:16127145 and REF_RGD_ID:2303093
CCL2Pigprotein binding enablesISOPR:P516759068941 PMID:8631787MGIPMID:8631787
CCL2Pigprotein binding enablesISOUniProtKB:P02776 more ...9068941 PMID:28381538IntActPMID:28381538
CCL2Pigprotein binding enablesISOUniProtKB:P78317 and UniProtKB:Q9Y3209068941 PMID:32296183IntActPMID:32296183
CCL2Pigprotein binding enablesISOUniProtKB:Q2F8629068941 PMID:26095031IntActPMID:26095031
CCL2Pigprotein binding enablesISOUniProtKB:P980669068941 PMID:27044744IntActPMID:27044744
CCL2Pigprotein binding enablesISOUniProtKB:E9M5R09068941 PMID:26671708IntActPMID:26671708
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RGD Manual Annotations


  

Imported Annotations - PID (archival)

Object Symbol
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Original Reference(s)
CCL2Piggranulocyte-macrophage colony-stimulating factor signaling pathway  ISOCCL2 (Homo sapiens)9068941 PIDPID:200019
CCL2Piginterleukin-23 signaling pathway  ISOCCL2 (Homo sapiens)9068941 PIDPID:200154
PMID:7510962   PMID:7622064   PMID:14962280   PMID:15274157   PMID:16926016   PMID:17588585   PMID:18276914   PMID:19036073   PMID:19730125   PMID:20580034   PMID:20670605   PMID:22301074  
PMID:24083897   PMID:29278679   PMID:30032202  



CCL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1240,798,109 - 40,800,026 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11240,798,109 - 40,800,013 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21242,514,202 - 42,516,108 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CCL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381734,255,285 - 34,257,203 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1734,255,274 - 34,257,208 (+)EnsemblGRCh38hg38GRCh38
GRCh371732,582,304 - 32,584,222 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361729,606,409 - 29,608,335 (+)NCBINCBI36Build 36hg18NCBI36
Build 341729,606,408 - 29,608,331NCBI
Celera1729,492,130 - 29,494,042 (+)NCBICelera
Cytogenetic Map17q12NCBI
HuRef1728,767,599 - 28,769,525 (+)NCBIHuRef
CHM1_11732,646,183 - 32,648,095 (+)NCBICHM1_1
T2T-CHM13v2.01735,201,562 - 35,203,480 (+)NCBIT2T-CHM13v2.0
Ccl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391181,926,403 - 81,928,278 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1181,926,397 - 81,928,279 (+)EnsemblGRCm39 Ensembl
GRCm381182,035,577 - 82,037,452 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1182,035,571 - 82,037,453 (+)EnsemblGRCm38mm10GRCm38
MGSCv371181,849,079 - 81,850,954 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361181,851,769 - 81,853,422 (+)NCBIMGSCv36mm8
Celera1191,649,026 - 91,650,901 (+)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1149.82NCBI
Ccl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81067,503,077 - 67,504,875 (+)NCBIGRCr8
mRatBN7.21067,005,424 - 67,007,222 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1067,005,424 - 67,007,226 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1071,626,649 - 71,628,447 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01071,131,996 - 71,133,794 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01066,593,121 - 66,594,919 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01069,412,065 - 69,413,863 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1069,412,017 - 69,413,870 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01069,047,091 - 69,048,889 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41070,256,263 - 70,258,061 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1065,952,968 - 65,954,766 (+)NCBICelera
Cytogenetic Map10q26NCBI
CCL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21930,208,206 - 30,210,212 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11732,089,476 - 32,091,422 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01722,528,154 - 22,530,091 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11722,821,336 - 22,823,271 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1722,820,890 - 22,823,384 (-)Ensemblpanpan1.1panPan2
CCL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1939,008,187 - 39,009,932 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha938,231,467 - 38,233,216 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0939,822,383 - 39,824,132 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1938,608,720 - 38,610,469 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0938,897,447 - 38,899,196 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0938,976,777 - 38,978,526 (-)NCBIUU_Cfam_GSD_1.0
CCL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11627,763,354 - 27,765,437 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1627,763,555 - 27,765,416 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660752,254,637 - 2,256,540 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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Variants in CCL2
52 total Variants



alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 22 3 2 5 14 12 22 3 6 3



Ensembl Acc Id: ENSSSCT00000019290   ⟹   ENSSSCP00000018779
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1240,798,109 - 40,800,026 (-)Ensembl
RefSeq Acc Id: NM_214214   ⟹   NP_999379
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11240,798,109 - 40,800,013 (-)NCBI
Sequence:
RefSeq Acc Id: NP_999379   ⟸   NM_214214
- Peptide Label: precursor
- UniProtKB: P42831 (UniProtKB/Swiss-Prot),   B3GDZ4 (UniProtKB/TrEMBL),   A0A8D0QY67 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000018779   ⟸   ENSSSCT00000019290
Chemokine interleukin-8-like



1 to 40 of 49 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSSCG00000017723 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSSSCG00015010935 UniProtKB/Swiss-Prot
  ENSSSCG00030054240 UniProtKB/Swiss-Prot
  ENSSSCG00035063168 UniProtKB/Swiss-Prot
  ENSSSCG00040010004 UniProtKB/Swiss-Prot
  ENSSSCG00045018363 UniProtKB/Swiss-Prot
  ENSSSCG00050039348 UniProtKB/Swiss-Prot
  ENSSSCG00055008496 UniProtKB/Swiss-Prot
  ENSSSCG00060056544 UniProtKB/Swiss-Prot
  ENSSSCG00065067117 UniProtKB/Swiss-Prot
  ENSSSCG00070008075 UniProtKB/Swiss-Prot
  ENSSSCG00085021837 UniProtKB/Swiss-Prot
  ENSSSCG00105018423 UniProtKB/Swiss-Prot
  ENSSSCG00110030644 UniProtKB/Swiss-Prot
  ENSSSCG00115019893 UniProtKB/Swiss-Prot
  ENSSSCG00130020477 UniProtKB/Swiss-Prot
Ensembl Transcript ENSSSCT00000019290 ENTREZGENE
  ENSSSCT00000019290.5 UniProtKB/Swiss-Prot
  ENSSSCT00015014476.1 UniProtKB/Swiss-Prot
  ENSSSCT00030075613.1 UniProtKB/Swiss-Prot
  ENSSSCT00035084936.1 UniProtKB/Swiss-Prot
  ENSSSCT00040012972.1 UniProtKB/Swiss-Prot
  ENSSSCT00045031268.1 UniProtKB/Swiss-Prot
  ENSSSCT00050053082.1 UniProtKB/Swiss-Prot
  ENSSSCT00055016609.1 UniProtKB/Swiss-Prot
  ENSSSCT00060077021.1 UniProtKB/Swiss-Prot
  ENSSSCT00065092116.1 UniProtKB/Swiss-Prot
  ENSSSCT00070015610.1 UniProtKB/Swiss-Prot
  ENSSSCT00085041638 UniProtKB/Swiss-Prot
  ENSSSCT00105035422 UniProtKB/Swiss-Prot
  ENSSSCT00110058536 UniProtKB/Swiss-Prot
  ENSSSCT00115035215 UniProtKB/Swiss-Prot
  ENSSSCT00130039788 UniProtKB/Swiss-Prot
Gene3D-CATH 2.40.50.40 UniProtKB/Swiss-Prot
InterPro Chemokine_b/g/d UniProtKB/Swiss-Prot
  Chemokine_CC_CS UniProtKB/Swiss-Prot
  Chemokine_IL8-like_dom UniProtKB/Swiss-Prot
  Interleukin_8-like_sf UniProtKB/Swiss-Prot
KEGG Report ssc:397422 UniProtKB/Swiss-Prot
NCBI Gene CCL2 ENTREZGENE
1 to 40 of 49 rows