GPR155 (G protein-coupled receptor 155) - Rat Genome Database

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Gene: GPR155 (G protein-coupled receptor 155) Sus scrofa
Analyze
Symbol: GPR155
Name: G protein-coupled receptor 155
RGD ID: 13986836
Description: ENCODES a protein that exhibits cholesterol binding (inferred); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to cholesterol (inferred); cognition (inferred); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Hepatomegaly (ortholog); FOUND IN lysosomal membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: integral membrane protein GPR155
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1580,396,976 - 80,462,018 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11580,417,247 - 80,462,091 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21589,588,500 - 89,700,017 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
lysosomal membrane  (IEA,ISO)
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
GPR155
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1580,396,976 - 80,462,018 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11580,417,247 - 80,462,091 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21589,588,500 - 89,700,017 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GPR155
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382174,431,571 - 174,487,029 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2174,431,571 - 174,487,094 (-)EnsemblGRCh38hg38GRCh38
GRCh372175,296,299 - 175,351,757 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362175,004,621 - 175,060,057 (-)NCBINCBI36Build 36hg18NCBI36
Build 342175,124,852 - 175,177,315NCBI
Celera2168,909,805 - 168,965,228 (-)NCBICelera
Cytogenetic Map2q31.1NCBI
HuRef2167,176,854 - 167,232,645 (-)NCBIHuRef
CHM1_12175,302,416 - 175,357,917 (-)NCBICHM1_1
T2T-CHM13v2.02174,920,213 - 174,975,693 (-)NCBIT2T-CHM13v2.0
Gpr155
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39273,171,850 - 73,216,842 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl273,171,850 - 73,216,916 (-)EnsemblGRCm39 Ensembl
GRCm38273,341,506 - 73,386,521 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl273,341,506 - 73,386,572 (-)EnsemblGRCm38mm10GRCm38
MGSCv37273,179,564 - 73,224,455 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36273,142,346 - 73,187,411 (-)NCBIMGSCv36mm8
Celera275,028,084 - 75,072,976 (-)NCBICelera
Cytogenetic Map2C3NCBI
cM Map243.59NCBI
Gpr155
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8378,623,931 - 78,677,803 (-)NCBIGRCr8
mRatBN7.2358,216,422 - 58,270,350 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl358,216,423 - 58,270,275 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx361,608,714 - 61,663,736 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0370,192,372 - 70,247,396 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0367,957,385 - 68,012,414 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0360,051,545 - 60,105,567 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl360,051,535 - 60,105,242 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0366,535,458 - 66,589,249 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4355,846,337 - 55,900,086 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1355,744,673 - 55,791,771 (-)NCBI
Celera357,751,878 - 57,798,023 (-)NCBICelera
Cytogenetic Map3q23NCBI
Gpr155
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955449889,590 - 930,146 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955449889,657 - 930,146 (+)NCBIChiLan1.0ChiLan1.0
GPR155
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21377,098,845 - 77,151,110 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B77,113,820 - 77,166,072 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B61,710,094 - 61,764,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B179,166,785 - 179,218,301 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B179,166,785 - 179,218,301 (-)Ensemblpanpan1.1panPan2
GPR155
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13618,481,269 - 18,524,733 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3618,482,910 - 18,520,192 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3618,490,301 - 18,533,981 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03618,616,992 - 18,660,430 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3618,616,995 - 18,660,433 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13618,694,132 - 18,737,537 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03618,692,674 - 18,736,267 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03618,803,433 - 18,846,862 (-)NCBIUU_Cfam_GSD_1.0
Gpr155
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303135,648,684 - 135,724,814 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365094,204,362 - 4,252,949 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365094,202,587 - 4,252,865 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR155
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11059,941,613 - 59,993,896 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1059,945,483 - 59,989,998 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040139,600,873 - 139,652,734 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpr155
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478711,682,977 - 11,727,018 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478711,683,622 - 11,727,020 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GPR155
870 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 2 5 17 1
Low 8 2 3 2 6 2 3 2
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000017384   ⟹   ENSSSCP00000016919
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1580,396,976 - 80,462,018 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000038330   ⟹   ENSSSCP00000033274
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1580,416,709 - 80,462,014 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000040091   ⟹   ENSSSCP00000050832
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1580,416,710 - 80,462,003 (-)Ensembl
RefSeq Acc Id: XM_003133486   ⟹   XP_003133534
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11580,417,274 - 80,462,090 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013990589   ⟹   XP_013846043
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11580,417,247 - 80,462,091 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013990590   ⟹   XP_013846044
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11580,417,247 - 80,462,071 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_013846043   ⟸   XM_013990589
- Peptide Label: isoform X2
- UniProtKB: A0A286ZP66 (UniProtKB/TrEMBL),   A0A8D0UPH0 (UniProtKB/TrEMBL),   A0A4X1UQ57 (UniProtKB/TrEMBL),   A0A8D0JBT4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013846044   ⟸   XM_013990590
- Peptide Label: isoform X3
- UniProtKB: A0A287B3I7 (UniProtKB/TrEMBL),   A0A8D0QBK7 (UniProtKB/TrEMBL),   A0A8D1B456 (UniProtKB/TrEMBL),   A0A8D1VK86 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003133534   ⟸   XM_003133486
- Peptide Label: isoform X1
- UniProtKB: A0A480UQ18 (UniProtKB/TrEMBL),   A0A4X1UN67 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000050832   ⟸   ENSSSCT00000040091
RefSeq Acc Id: ENSSSCP00000016919   ⟸   ENSSSCT00000017384
RefSeq Acc Id: ENSSSCP00000033274   ⟸   ENSSSCT00000038330
Protein Domains
DEP


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000015965 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005027212 UniProtKB/TrEMBL
  ENSSSCG00015080587 UniProtKB/TrEMBL
  ENSSSCG00025033227 UniProtKB/TrEMBL
  ENSSSCG00030060137 UniProtKB/TrEMBL
  ENSSSCG00035076052 UniProtKB/TrEMBL
  ENSSSCG00040071927 UniProtKB/TrEMBL
  ENSSSCG00045007034 UniProtKB/TrEMBL
  ENSSSCG00050053193 UniProtKB/TrEMBL
  ENSSSCG00055005101 UniProtKB/TrEMBL
  ENSSSCG00060044199 UniProtKB/TrEMBL
  ENSSSCG00065032672 UniProtKB/TrEMBL
  ENSSSCG00070019054 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000017384 ENTREZGENE
  ENSSSCT00000017384.4 UniProtKB/TrEMBL
  ENSSSCT00000038330 ENTREZGENE
  ENSSSCT00000038330.1 UniProtKB/TrEMBL
  ENSSSCT00000040091 ENTREZGENE
  ENSSSCT00000040091.2 UniProtKB/TrEMBL
  ENSSSCT00005043066.1 UniProtKB/TrEMBL
  ENSSSCT00005043093.1 UniProtKB/TrEMBL
  ENSSSCT00015109610.1 UniProtKB/TrEMBL
  ENSSSCT00015109616.1 UniProtKB/TrEMBL
  ENSSSCT00025045315.1 UniProtKB/TrEMBL
  ENSSSCT00025045423.1 UniProtKB/TrEMBL
  ENSSSCT00030083944.1 UniProtKB/TrEMBL
  ENSSSCT00030084062.1 UniProtKB/TrEMBL
  ENSSSCT00035103468.1 UniProtKB/TrEMBL
  ENSSSCT00035103508.1 UniProtKB/TrEMBL
  ENSSSCT00040099010.1 UniProtKB/TrEMBL
  ENSSSCT00040099089.1 UniProtKB/TrEMBL
  ENSSSCT00045011665.1 UniProtKB/TrEMBL
  ENSSSCT00045011790.1 UniProtKB/TrEMBL
  ENSSSCT00050072446.1 UniProtKB/TrEMBL
  ENSSSCT00050072457.1 UniProtKB/TrEMBL
  ENSSSCT00055009992.1 UniProtKB/TrEMBL
  ENSSSCT00055010061.1 UniProtKB/TrEMBL
  ENSSSCT00060059923.1 UniProtKB/TrEMBL
  ENSSSCT00060059948.1 UniProtKB/TrEMBL
  ENSSSCT00065044319.1 UniProtKB/TrEMBL
  ENSSSCT00065044359.1 UniProtKB/TrEMBL
  ENSSSCT00070037642.1 UniProtKB/TrEMBL
  ENSSSCT00070037662.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/TrEMBL
  Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro DEP_dom UniProtKB/TrEMBL
  GPR155_DEP UniProtKB/TrEMBL
  Mem_trans UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
KEGG Report ssc:100511231 UniProtKB/TrEMBL
NCBI Gene GPR155 ENTREZGENE
PANTHER DEP DOMAIN PROTEIN UniProtKB/TrEMBL
  INTEGRAL MEMBRANE PROTEIN GPR155 UniProtKB/TrEMBL
Pfam DEP UniProtKB/TrEMBL
  Mem_trans UniProtKB/TrEMBL
PROSITE DEP UniProtKB/TrEMBL
SMART DEP UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/TrEMBL
UniProt A0A286ZP66 ENTREZGENE, UniProtKB/TrEMBL
  A0A287B3I7 ENTREZGENE, UniProtKB/TrEMBL
  A0A480UQ18 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1UN67 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1UQ57 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0JBT4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0QBK7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0UPH0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1B456 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1VK86 ENTREZGENE, UniProtKB/TrEMBL
  F1S060_PIG UniProtKB/TrEMBL
VGNC ID VGNC:95984 ENTREZGENE