MSTN (myostatin) - Rat Genome Database

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Gene: MSTN (myostatin) Sus scrofa
Analyze
Symbol: MSTN
Name: myostatin
RGD ID: 13916436
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to hypoxia (ortholog); myoblast migration involved in skeletal muscle regeneration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Burns (ortholog); Cachexia (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: GDF-8; GDF8; GDF8:MSTN; growth differentiation factor 8; growth/differentiation factor 8
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1594,620,270 - 94,628,545 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11594,623,526 - 94,628,440 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215105,734,309 - 105,739,223 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:9356471   PMID:9682443   PMID:10612246   PMID:15986890   PMID:16248430   PMID:16366271   PMID:17573916   PMID:18822098   PMID:19674865   PMID:20497155   PMID:21571901   PMID:22160830  
PMID:22301074   PMID:22342668   PMID:23134308   PMID:24628723   PMID:25007254   PMID:25377122   PMID:26066356   PMID:26488621   PMID:26564781   PMID:27530319   PMID:30032202   PMID:30645618  
PMID:30699111   PMID:30921567   PMID:31104696   PMID:32078127   PMID:33097765  


Genomics

Comparative Map Data
MSTN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1594,620,270 - 94,628,545 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11594,623,526 - 94,628,440 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215105,734,309 - 105,739,223 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MSTN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382190,055,700 - 190,062,729 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2190,055,700 - 190,062,729 (-)EnsemblGRCh38hg38GRCh38
GRCh372190,920,426 - 190,927,455 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362190,628,671 - 190,635,700 (-)NCBINCBI36Build 36hg18NCBI36
Build 342190,745,932 - 190,752,961NCBI
Celera2184,515,357 - 184,522,386 (-)NCBICelera
Cytogenetic Map2q32.2NCBI
HuRef2182,780,433 - 182,787,462 (-)NCBIHuRef
CHM1_12190,926,378 - 190,933,407 (-)NCBICHM1_1
T2T-CHM13v2.02190,545,060 - 190,552,089 (-)NCBIT2T-CHM13v2.0
Mstn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39153,100,799 - 53,107,238 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl153,100,799 - 53,107,238 (+)EnsemblGRCm39 Ensembl
GRCm38153,061,640 - 53,068,079 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl153,061,640 - 53,068,079 (+)EnsemblGRCm38mm10GRCm38
MGSCv37153,118,507 - 53,124,923 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36153,006,208 - 53,012,624 (+)NCBIMGSCv36mm8
Celera153,601,512 - 53,607,928 (+)NCBICelera
Cytogenetic Map1C1.1NCBI
cM Map126.99NCBI
Mstn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8955,944,513 - 55,950,913 (-)NCBIGRCr8
mRatBN7.2948,452,533 - 48,458,933 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl948,452,533 - 48,458,933 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx956,995,653 - 57,000,498 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0962,118,483 - 62,123,328 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0960,414,473 - 60,419,318 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0953,310,977 - 53,315,804 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl953,309,598 - 53,315,915 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0952,977,371 - 52,982,198 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4945,426,831 - 45,431,658 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1945,428,244 - 45,433,072 (-)NCBI
Celera946,124,738 - 46,129,565 (-)NCBICelera
Cytogenetic Map9q22NCBI
Mstn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554038,914,482 - 8,923,465 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554038,914,505 - 8,921,190 (+)NCBIChiLan1.0ChiLan1.0
MSTN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21392,751,094 - 92,761,026 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B92,765,891 - 92,773,149 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B77,364,927 - 77,452,426 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B195,283,903 - 195,290,922 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B195,283,903 - 195,290,922 (-)Ensemblpanpan1.1panPan2
MSTN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.137729,172 - 734,255 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl37729,172 - 734,362 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha371,685,007 - 1,690,090 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.037623,197 - 628,235 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl37621,860 - 628,368 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.137633,617 - 638,697 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.037601,655 - 606,733 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.037629,871 - 634,951 (-)NCBIUU_Cfam_GSD_1.0
Mstn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303148,842,726 - 148,849,304 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365067,988,718 - 7,996,971 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365067,988,879 - 7,996,260 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MSTN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11075,564,816 - 75,570,956 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1075,565,152 - 75,570,528 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040123,900,932 - 123,908,109 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mstn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248545,892,938 - 5,899,473 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248545,893,051 - 5,899,380 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MSTN
41 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
5 2 21 3 1 9 8 21 3 5

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_214435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF019623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF033855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF093798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF188635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF188636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF188637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF188638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH010972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ133580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ237662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ237920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY162179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY208121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY448008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY527152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY527153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU928361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF490986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF490987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF490988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF490989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF490990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF612791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU182312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU182313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM241657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ180174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JN630464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSSCT00000017472   ⟹   ENSSSCP00000017001
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1594,620,270 - 94,628,545 (-)Ensembl
RefSeq Acc Id: NM_214435   ⟹   NP_999600
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11594,623,526 - 94,628,440 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_999600 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB86690 (Get FASTA)   NCBI Sequence Viewer  
  AAC08035 (Get FASTA)   NCBI Sequence Viewer  
  AAC62489 (Get FASTA)   NCBI Sequence Viewer  
  AAF02770 (Get FASTA)   NCBI Sequence Viewer  
  AAF02771 (Get FASTA)   NCBI Sequence Viewer  
  AAF02772 (Get FASTA)   NCBI Sequence Viewer  
  AAF02773 (Get FASTA)   NCBI Sequence Viewer  
  AAK83853 (Get FASTA)   NCBI Sequence Viewer  
  AAO23664 (Get FASTA)   NCBI Sequence Viewer  
  AAO31983 (Get FASTA)   NCBI Sequence Viewer  
  AAR18245 (Get FASTA)   NCBI Sequence Viewer  
  AAS18674 (Get FASTA)   NCBI Sequence Viewer  
  AAS18675 (Get FASTA)   NCBI Sequence Viewer  
  ABO64638 (Get FASTA)   NCBI Sequence Viewer  
  ABO64639 (Get FASTA)   NCBI Sequence Viewer  
  ABO64640 (Get FASTA)   NCBI Sequence Viewer  
  ABO64641 (Get FASTA)   NCBI Sequence Viewer  
  ABO64642 (Get FASTA)   NCBI Sequence Viewer  
  ABR08657 (Get FASTA)   NCBI Sequence Viewer  
  ACZ68334 (Get FASTA)   NCBI Sequence Viewer  
  ACZ68335 (Get FASTA)   NCBI Sequence Viewer  
  ADQ74915 (Get FASTA)   NCBI Sequence Viewer  
  ADV78519 (Get FASTA)   NCBI Sequence Viewer  
  AEP13978 (Get FASTA)   NCBI Sequence Viewer  
  CAB39561 (Get FASTA)   NCBI Sequence Viewer  
  CAB40109 (Get FASTA)   NCBI Sequence Viewer  
  CAB40844 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000017001
  ENSSSCP00000017001.2
  ENSSSCP00015000900.1
  ENSSSCP00025029196.1
  ENSSSCP00030010461.1
  ENSSSCP00035014874.1
  ENSSSCP00040010829.1
  ENSSSCP00045012947.1
  ENSSSCP00050006740.1
  ENSSSCP00055034200.1
  ENSSSCP00060040929.1
  ENSSSCP00065014182.1
  ENSSSCP00070015094.1
GenBank Protein O18831 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_999600   ⟸   NM_214435
- Peptide Label: precursor
- UniProtKB: Q6SVB3 (UniProtKB/TrEMBL),   A5Z1X3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000017001   ⟸   ENSSSCT00000017472

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000016047 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSSSCG00015002286 UniProtKB/Swiss-Prot
  ENSSSCG00025049835 UniProtKB/Swiss-Prot
  ENSSSCG00030016859 UniProtKB/Swiss-Prot
  ENSSSCG00035028194 UniProtKB/Swiss-Prot
  ENSSSCG00040018971 UniProtKB/Swiss-Prot
  ENSSSCG00045011070 UniProtKB/Swiss-Prot
  ENSSSCG00050012141 UniProtKB/Swiss-Prot
  ENSSSCG00055021878 UniProtKB/Swiss-Prot
  ENSSSCG00060069269 UniProtKB/Swiss-Prot
  ENSSSCG00065025598 UniProtKB/Swiss-Prot
  ENSSSCG00070009359 UniProtKB/Swiss-Prot
Ensembl Transcript ENSSSCT00000017472 ENTREZGENE
  ENSSSCT00000017472.5 UniProtKB/Swiss-Prot
  ENSSSCT00015002832.1 UniProtKB/Swiss-Prot
  ENSSSCT00025067980.1 UniProtKB/Swiss-Prot
  ENSSSCT00030023330.1 UniProtKB/Swiss-Prot
  ENSSSCT00035037306.1 UniProtKB/Swiss-Prot
  ENSSSCT00040025633.1 UniProtKB/Swiss-Prot
  ENSSSCT00045018814.1 UniProtKB/Swiss-Prot
  ENSSSCT00050016408.1 UniProtKB/Swiss-Prot
  ENSSSCT00055042989.1 UniProtKB/Swiss-Prot
  ENSSSCT00060094644.1 UniProtKB/Swiss-Prot
  ENSSSCT00065034252.1 UniProtKB/Swiss-Prot
  ENSSSCT00070018169.1 UniProtKB/Swiss-Prot
Gene3D-CATH 2.10.90.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.120.970 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cystine-knot_cytokine UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TGF-b_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TGF-b_propeptide UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TGF-beta-rel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TGFb_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:399534 UniProtKB/TrEMBL
NCBI Gene MSTN ENTREZGENE
PANTHER PTHR11848 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11848:SF150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam TGF_beta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TGFb_propeptide UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE TGF_BETA_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TGF_BETA_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART TGFB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57501 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A5Z1X3 ENTREZGENE, UniProtKB/TrEMBL
  E9KYT4_PIG UniProtKB/TrEMBL
  E9M2L9_PIG UniProtKB/TrEMBL
  GDF8_PIG UniProtKB/Swiss-Prot, ENTREZGENE
  Q6SVB3 ENTREZGENE, UniProtKB/TrEMBL
  Q866T6_PIG UniProtKB/TrEMBL
  Q9TSY2_PIG UniProtKB/TrEMBL
  Q9TSY4_PIG UniProtKB/TrEMBL
UniProt Secondary Q540D6 UniProtKB/Swiss-Prot
VGNC ID VGNC:96320 ENTREZGENE