NFIX (nuclear factor I X) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: NFIX (nuclear factor I X) Sus scrofa
Analyze
Symbol: NFIX
Name: nuclear factor I X
RGD ID: 14188798
Description: ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); atrioventricular canal morphogenesis (ortholog); bone mineralization (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 4 (ortholog); alpha-mannosidosis (ortholog); Charcot-Marie-Tooth disease dominant intermediate B (ortholog); FOUND IN nucleoplasm (ortholog); INTERACTS WITH ammonia; deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: nuclear factor 1 X-type
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl265,954,811 - 66,056,567 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1265,954,808 - 66,056,591 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2266,321,736 - 66,402,215 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
ammonia  (EXP)
deoxynivalenol  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
astrocyte differentiation  (ISO)
atrioventricular canal morphogenesis  (ISO)
bone mineralization  (ISO)
brain development  (ISO)
brain morphogenesis  (ISO)
camera-type eye development  (ISO)
cell maturation  (ISO)
cell morphogenesis  (ISO)
cell proliferation in forebrain  (ISO)
cellular response to BMP stimulus  (ISO)
cerebellar cortex morphogenesis  (ISO)
cerebellar granule cell differentiation  (ISO)
cerebellar Purkinje cell layer development  (ISO)
cerebellum development  (ISO)
cerebral cortex development  (ISO)
collateral sprouting  (ISO)
DNA replication  (IEA)
ear development  (ISO)
endochondral ossification  (ISO)
epithelium development  (ISO)
exit from mitosis  (ISO)
forebrain development  (ISO)
forebrain radial glial cell differentiation  (ISO)
gene expression  (ISO)
generation of neurons  (ISO)
glial cell development  (ISO)
glial cell fate specification  (ISO)
glial cell proliferation  (ISO)
gliogenesis  (ISO)
hippocampus development  (ISO)
homeostasis of number of cells within a tissue  (ISO)
inflammatory response  (ISO)
lateral ventricle development  (ISO)
learning  (ISO)
macrophage differentiation  (ISO)
memory  (ISO)
multicellular organism growth  (ISO)
negative regulation of neuron apoptotic process  (ISO)
negative regulation of transcription by RNA polymerase II  (IEA)
neural precursor cell proliferation  (ISO)
neuroblast differentiation  (ISO)
neuroblast migration  (ISO)
neuroblast proliferation  (ISO)
neurogenesis  (ISO)
neuron differentiation  (ISO)
neuron fate specification  (ISO)
olfactory bulb development  (ISO)
oligodendrocyte differentiation  (ISO)
osteoclast differentiation  (ISO)
osteoclast proliferation  (ISO)
phagocytosis  (ISO)
positive regulation of DNA-templated transcription  (IEA)
positive regulation of transcription by RNA polymerase II  (IEA,ISO)
regeneration  (ISO)
regulation of DNA-binding transcription factor activity  (ISO)
regulation of DNA-templated transcription  (IEA)
regulation of transcription by RNA polymerase II  (IBA)
response to wounding  (ISO)
retina development in camera-type eye  (ISO)
Rho protein signal transduction  (ISO)
skeletal muscle satellite cell differentiation  (ISO)
skeletal muscle tissue development  (ISO)
skeletal muscle tissue regeneration  (ISO)
skeletal system development  (ISO)
social behavior  (ISO)
spinal cord development  (ISO)
stem cell population maintenance  (ISO)
tissue homeostasis  (ISO)
transcription by RNA polymerase II  (ISO)

Cellular Component
nucleoplasm  (ISO)
nucleus  (IBA,IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NFIX
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl265,954,811 - 66,056,567 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1265,954,808 - 66,056,591 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2266,321,736 - 66,402,215 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NFIX
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381912,995,475 - 13,098,796 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1912,995,475 - 13,098,796 (+)EnsemblGRCh38hg38GRCh38
GRCh371913,106,289 - 13,209,610 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361912,967,584 - 13,070,610 (+)NCBINCBI36Build 36hg18NCBI36
Build 341912,967,583 - 13,070,610NCBI
Celera1912,996,993 - 13,100,014 (+)NCBICelera
Cytogenetic Map19p13.13NCBI
HuRef1912,707,303 - 12,782,249 (+)NCBIHuRef
CHM1_11913,107,626 - 13,210,624 (+)NCBICHM1_1
T2T-CHM13v2.01913,120,686 - 13,224,010 (+)NCBIT2T-CHM13v2.0
Nfix
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,431,341 - 85,527,086 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl885,426,505 - 85,526,973 (-)EnsemblGRCm39 Ensembl
GRCm38884,704,712 - 84,801,238 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,699,876 - 84,800,344 (-)EnsemblGRCm38mm10GRCm38
MGSCv37887,231,498 - 87,324,239 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36887,598,719 - 87,690,245 (-)NCBIMGSCv36mm8
Celera889,007,669 - 89,082,215 (-)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.02NCBI
Nfix
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,259,873 - 40,356,966 (+)NCBIGRCr8
mRatBN7.21923,355,388 - 23,450,360 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1923,355,498 - 23,448,265 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,178,323 - 30,271,128 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01930,832,693 - 30,925,505 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01933,055,373 - 33,148,200 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,818,640 - 25,914,777 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,821,780 - 25,914,696 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,794,504 - 36,890,430 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,018,352 - 25,111,367 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11925,023,177 - 25,097,311 (+)NCBI
Celera1922,941,014 - 23,001,968 (+)NCBICelera
Cytogenetic Map19q11NCBI
Nfix
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541532,055,375 - 32,117,833 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541532,055,926 - 32,121,611 (+)NCBIChiLan1.0ChiLan1.0
NFIX
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22017,924,044 - 18,027,343 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11916,924,649 - 17,027,957 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01912,557,020 - 12,660,316 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11913,315,482 - 13,402,406 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1913,327,690 - 13,402,406 (+)Ensemblpanpan1.1panPan2
NFIX
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12049,117,087 - 49,187,023 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2049,117,943 - 49,214,788 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2048,989,635 - 49,094,158 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02049,634,123 - 49,738,501 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2049,635,376 - 49,703,891 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12048,845,676 - 48,949,981 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02049,272,022 - 49,376,246 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02049,514,448 - 49,619,003 (-)NCBIUU_Cfam_GSD_1.0
Nfix
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118208,221,747 - 208,289,349 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366592,065,458 - 2,136,889 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366592,065,410 - 2,136,898 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NFIX
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1611,705,323 - 11,778,943 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl611,706,060 - 11,776,083 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660748,003,657 - 8,106,509 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nfix
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624901550,931 - 646,417 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624901551,277 - 645,435 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NFIX
1019 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000015016   ⟹   ENSSSCP00000014611
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl265,954,818 - 66,056,567 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000044397   ⟹   ENSSSCP00000053982
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl265,954,244 - 66,028,734 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000046203   ⟹   ENSSSCP00000051129
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl265,954,818 - 66,028,928 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000054859   ⟹   ENSSSCP00000040483
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl265,954,818 - 66,029,308 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000060421   ⟹   ENSSSCP00000051684
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl265,963,729 - 66,034,449 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000064426   ⟹   ENSSSCP00000034781
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl265,954,811 - 66,029,714 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000089214   ⟹   ENSSSCP00000063453
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl265,954,818 - 66,029,921 (-)Ensembl
RefSeq Acc Id: XM_003123333   ⟹   XP_003123381
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,029,573 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652881   ⟹   XP_005652938
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,036,733 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652882   ⟹   XP_005652939
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,029,823 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652883   ⟹   XP_005652940
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,029,577 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652884   ⟹   XP_005652941
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,029,555 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013990839   ⟹   XP_013846293
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,029,572 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083711   ⟹   XP_020939370
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,056,591 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083712   ⟹   XP_020939371
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,056,591 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083713   ⟹   XP_020939372
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1265,954,808 - 66,029,557 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003123381 (Get FASTA)   NCBI Sequence Viewer  
  XP_005652938 (Get FASTA)   NCBI Sequence Viewer  
  XP_005652939 (Get FASTA)   NCBI Sequence Viewer  
  XP_005652940 (Get FASTA)   NCBI Sequence Viewer  
  XP_005652941 (Get FASTA)   NCBI Sequence Viewer  
  XP_013846293 (Get FASTA)   NCBI Sequence Viewer  
  XP_020939370 (Get FASTA)   NCBI Sequence Viewer  
  XP_020939371 (Get FASTA)   NCBI Sequence Viewer  
  XP_020939372 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000014611
  ENSSSCP00000014611.4
  ENSSSCP00000034781.3
  ENSSSCP00000040483
  ENSSSCP00000040483.2
  ENSSSCP00000051129
  ENSSSCP00000051129.3
  ENSSSCP00000051684.3
  ENSSSCP00000063453
  ENSSSCP00000063453.2
  ENSSSCP00015021128.1
  ENSSSCP00015021145.1
  ENSSSCP00015021170.1
  ENSSSCP00015021253.1
  ENSSSCP00015021329.1
  ENSSSCP00015021416.1
  ENSSSCP00015021512.1
  ENSSSCP00025034603.1
  ENSSSCP00025034770.1
  ENSSSCP00025034891.1
  ENSSSCP00025035005.1
  ENSSSCP00025035117.1
  ENSSSCP00025035233.1
  ENSSSCP00030005739.1
  ENSSSCP00030005753.1
  ENSSSCP00030005759.1
  ENSSSCP00030005776.1
  ENSSSCP00030005809.1
  ENSSSCP00035048910.1
  ENSSSCP00035048912.1
  ENSSSCP00035048913.1
  ENSSSCP00035048915.1
  ENSSSCP00035048918.1
  ENSSSCP00035048920.1
  ENSSSCP00035048924.1
  ENSSSCP00035048927.1
  ENSSSCP00040008730.1
  ENSSSCP00040008752.1
  ENSSSCP00040008756.1
  ENSSSCP00040008786.1
  ENSSSCP00040008837.1
  ENSSSCP00040008850.1
  ENSSSCP00045026935.1
  ENSSSCP00045027079.1
  ENSSSCP00045027150.1
  ENSSSCP00045027244.1
  ENSSSCP00045027316.1
  ENSSSCP00045027403.1
  ENSSSCP00045027579.1
  ENSSSCP00050036271.1
  ENSSSCP00050036276.1
  ENSSSCP00050036279.1
  ENSSSCP00050036281.1
  ENSSSCP00050036283.1
  ENSSSCP00055032309.1
  ENSSSCP00055032375.1
  ENSSSCP00055032426.1
  ENSSSCP00055032506.1
  ENSSSCP00055032765.1
  ENSSSCP00055032845.1
  ENSSSCP00055032939.1
  ENSSSCP00055033046.1
  ENSSSCP00060009515.1
  ENSSSCP00060009522.1
  ENSSSCP00060009545.1
  ENSSSCP00060009553.1
  ENSSSCP00070011762.1
  ENSSSCP00070011836.1
  ENSSSCP00070012017.1
  ENSSSCP00070012150.1
  ENSSSCP00070012253.1
  ENSSSCP00070012305.1
  ENSSSCP00070012308.1
  ENSSSCP00070012325.1
RefSeq Acc Id: XP_020939371   ⟸   XM_021083712
- Peptide Label: isoform X8
- UniProtKB: A0A4X1T9Q4 (UniProtKB/TrEMBL),   A0A287B4C0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020939370   ⟸   XM_021083711
- Peptide Label: isoform X3
- UniProtKB: A0A4X1T923 (UniProtKB/TrEMBL),   F1SDA0 (UniProtKB/TrEMBL),   A0A8D0SPM9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005652938   ⟸   XM_005652881
- Peptide Label: isoform X2
- UniProtKB: A0A8D0M7Q6 (UniProtKB/TrEMBL),   A0A4X1TAY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005652939   ⟸   XM_005652882
- Peptide Label: isoform X4
- UniProtKB: A0A4X1T887 (UniProtKB/TrEMBL),   A0A5G2QMV7 (UniProtKB/TrEMBL),   A0A4X1TAY1 (UniProtKB/TrEMBL),   A0A8D1N8K5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005652940   ⟸   XM_005652883
- Peptide Label: isoform X6
- UniProtKB: A0A8D1TL91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003123381   ⟸   XM_003123333
- Peptide Label: isoform X1
- UniProtKB: A0A8D0NN11 (UniProtKB/TrEMBL),   A0A287A966 (UniProtKB/TrEMBL),   A0A4X1TAY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013846293   ⟸   XM_013990839
- Peptide Label: isoform X5
- UniProtKB: A0A287B4C0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020939372   ⟸   XM_021083713
- Peptide Label: isoform X9
- UniProtKB: A0A287B4C0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005652941   ⟸   XM_005652884
- Peptide Label: isoform X7
- UniProtKB: A0A287B4C0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000014611   ⟸   ENSSSCT00000015016
Ensembl Acc Id: ENSSSCP00000040483   ⟸   ENSSSCT00000054859
Ensembl Acc Id: ENSSSCP00000034781   ⟸   ENSSSCT00000064426
Ensembl Acc Id: ENSSSCP00000053982   ⟸   ENSSSCT00000044397
Ensembl Acc Id: ENSSSCP00000063453   ⟸   ENSSSCT00000089214
Ensembl Acc Id: ENSSSCP00000051684   ⟸   ENSSSCT00000060421
Ensembl Acc Id: ENSSSCP00000051129   ⟸   ENSSSCT00000046203
Protein Domains
CTF/NF-I


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000013742 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015039655 UniProtKB/TrEMBL
  ENSSSCG00025058081 UniProtKB/TrEMBL
  ENSSSCG00030009197 UniProtKB/TrEMBL
  ENSSSCG00035081154 UniProtKB/TrEMBL
  ENSSSCG00040014381 UniProtKB/TrEMBL
  ENSSSCG00045022630 UniProtKB/TrEMBL
  ENSSSCG00050061972 UniProtKB/TrEMBL
  ENSSSCG00055020706 UniProtKB/TrEMBL
  ENSSSCG00060017093 UniProtKB/TrEMBL
  ENSSSCG00070006945 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000015016 ENTREZGENE
  ENSSSCT00000015016.4 UniProtKB/TrEMBL
  ENSSSCT00000046203 ENTREZGENE
  ENSSSCT00000046203.3 UniProtKB/TrEMBL
  ENSSSCT00000054859 ENTREZGENE
  ENSSSCT00000054859.3 UniProtKB/TrEMBL
  ENSSSCT00000060421.3 UniProtKB/TrEMBL
  ENSSSCT00000064426.3 UniProtKB/TrEMBL
  ENSSSCT00000089214 ENTREZGENE
  ENSSSCT00000089214.2 UniProtKB/TrEMBL
  ENSSSCT00015052816.1 UniProtKB/TrEMBL
  ENSSSCT00015052845.1 UniProtKB/TrEMBL
  ENSSSCT00015052898.1 UniProtKB/TrEMBL
  ENSSSCT00015053074.1 UniProtKB/TrEMBL
  ENSSSCT00015053222.1 UniProtKB/TrEMBL
  ENSSSCT00015053415.1 UniProtKB/TrEMBL
  ENSSSCT00015053662.1 UniProtKB/TrEMBL
  ENSSSCT00025079694.1 UniProtKB/TrEMBL
  ENSSSCT00025080039.1 UniProtKB/TrEMBL
  ENSSSCT00025080281.1 UniProtKB/TrEMBL
  ENSSSCT00025080517.1 UniProtKB/TrEMBL
  ENSSSCT00025080777.1 UniProtKB/TrEMBL
  ENSSSCT00025081056.1 UniProtKB/TrEMBL
  ENSSSCT00030012778.1 UniProtKB/TrEMBL
  ENSSSCT00030012800.1 UniProtKB/TrEMBL
  ENSSSCT00030012809.1 UniProtKB/TrEMBL
  ENSSSCT00030012833.1 UniProtKB/TrEMBL
  ENSSSCT00030012888.1 UniProtKB/TrEMBL
  ENSSSCT00035111546.1 UniProtKB/TrEMBL
  ENSSSCT00035111550.1 UniProtKB/TrEMBL
  ENSSSCT00035111551.1 UniProtKB/TrEMBL
  ENSSSCT00035111553.1 UniProtKB/TrEMBL
  ENSSSCT00035111556.1 UniProtKB/TrEMBL
  ENSSSCT00035111558.1 UniProtKB/TrEMBL
  ENSSSCT00035111562.1 UniProtKB/TrEMBL
  ENSSSCT00035111565.1 UniProtKB/TrEMBL
  ENSSSCT00040020771.1 UniProtKB/TrEMBL
  ENSSSCT00040020838.1 UniProtKB/TrEMBL
  ENSSSCT00040020845.1 UniProtKB/TrEMBL
  ENSSSCT00040020921.1 UniProtKB/TrEMBL
  ENSSSCT00040021060.1 UniProtKB/TrEMBL
  ENSSSCT00040021096.1 UniProtKB/TrEMBL
  ENSSSCT00045038741.1 UniProtKB/TrEMBL
  ENSSSCT00045038941.1 UniProtKB/TrEMBL
  ENSSSCT00045039029.1 UniProtKB/TrEMBL
  ENSSSCT00045039155.1 UniProtKB/TrEMBL
  ENSSSCT00045039265.1 UniProtKB/TrEMBL
  ENSSSCT00045039389.1 UniProtKB/TrEMBL
  ENSSSCT00045039618.1 UniProtKB/TrEMBL
  ENSSSCT00050084486.1 UniProtKB/TrEMBL
  ENSSSCT00050084492.1 UniProtKB/TrEMBL
  ENSSSCT00050084495.1 UniProtKB/TrEMBL
  ENSSSCT00050084501.1 UniProtKB/TrEMBL
  ENSSSCT00050084510.1 UniProtKB/TrEMBL
  ENSSSCT00055040594.1 UniProtKB/TrEMBL
  ENSSSCT00055040690.1 UniProtKB/TrEMBL
  ENSSSCT00055040765.1 UniProtKB/TrEMBL
  ENSSSCT00055040864.1 UniProtKB/TrEMBL
  ENSSSCT00055041166.1 UniProtKB/TrEMBL
  ENSSSCT00055041270.1 UniProtKB/TrEMBL
  ENSSSCT00055041384.1 UniProtKB/TrEMBL
  ENSSSCT00055041516.1 UniProtKB/TrEMBL
  ENSSSCT00060022887.1 UniProtKB/TrEMBL
  ENSSSCT00060022895.1 UniProtKB/TrEMBL
  ENSSSCT00060022937.1 UniProtKB/TrEMBL
  ENSSSCT00060022955.1 UniProtKB/TrEMBL
  ENSSSCT00070014252.1 UniProtKB/TrEMBL
  ENSSSCT00070014339.1 UniProtKB/TrEMBL
  ENSSSCT00070014553.1 UniProtKB/TrEMBL
  ENSSSCT00070014708.1 UniProtKB/TrEMBL
  ENSSSCT00070014820.1 UniProtKB/TrEMBL
  ENSSSCT00070014874.1 UniProtKB/TrEMBL
  ENSSSCT00070014878.1 UniProtKB/TrEMBL
  ENSSSCT00070014899.1 UniProtKB/TrEMBL
InterPro CTF/NFI UniProtKB/TrEMBL
  CTF/NFI_DNA-bd-dom UniProtKB/TrEMBL
  CTF/NFI_DNA-bd_CS UniProtKB/TrEMBL
  CTF/NFI_DNA-bd_N UniProtKB/TrEMBL
  MAD_homology1_Dwarfin-type UniProtKB/TrEMBL
KEGG Report ssc:100523536 UniProtKB/TrEMBL
NCBI Gene NFIX ENTREZGENE
PANTHER NUCLEAR FACTOR 1 X-TYPE UniProtKB/TrEMBL
  PTHR11492 UniProtKB/TrEMBL
Pfam CTF_NFI UniProtKB/TrEMBL
  MH1 UniProtKB/TrEMBL
  NfI_DNAbd_pre-N UniProtKB/TrEMBL
PROSITE CTF_NFI_1 UniProtKB/TrEMBL
  CTF_NFI_2 UniProtKB/TrEMBL
SMART DWA UniProtKB/TrEMBL
UniProt A0A286ZT86_PIG UniProtKB/TrEMBL
  A0A287A966 ENTREZGENE, UniProtKB/TrEMBL
  A0A287B4C0 ENTREZGENE, UniProtKB/TrEMBL
  A0A287B6I5_PIG UniProtKB/TrEMBL
  A0A4X1T887 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1T923 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1T988_PIG UniProtKB/TrEMBL
  A0A4X1T9Q4 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1TA11_PIG UniProtKB/TrEMBL
  A0A4X1TA83_PIG UniProtKB/TrEMBL
  A0A4X1TA93_PIG UniProtKB/TrEMBL
  A0A4X1TAY1 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QMV7 ENTREZGENE
  A0A8D0M7Q6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0NN11 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0SPM9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0SVN8_PIG UniProtKB/TrEMBL
  A0A8D1BKG3_PIG UniProtKB/TrEMBL
  A0A8D1N8K5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1TL91 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1U7L9_PIG UniProtKB/TrEMBL
  F1SDA0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A5G2QMV7 UniProtKB/TrEMBL
VGNC ID VGNC:90718 ENTREZGENE