CASK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | X | 37,167,577 - 37,536,160 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 37,166,973 - 37,535,723 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 41,385,026 - 41,762,853 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CASK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 41,514,934 - 41,923,554 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 41,514,934 - 41,923,554 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 41,374,187 - 41,782,807 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 41,264,287 - 41,667,212 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 41,135,596 - 41,538,522 | NCBI | | | | | Celera | X | 45,516,432 - 45,924,508 (-) | NCBI | | Celera | | | Cytogenetic Map | X | p11.4 | NCBI | | | | | HuRef | X | 39,105,639 - 39,513,256 (-) | NCBI | | HuRef | | | CHM1_1 | X | 41,406,782 - 41,814,790 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 40,919,852 - 41,328,508 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Cask (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 13,383,319 - 13,713,020 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 13,383,319 - 13,717,606 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 13,517,080 - 13,846,783 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 13,517,080 - 13,851,367 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 13,094,206 - 13,423,667 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 12,678,006 - 13,003,515 (-) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | X | 10,595,356 - 10,921,350 (-) | NCBI | | MGSCv36 | mm8 | | Celera | X | 11,186,392 - 11,514,710 (-) | NCBI | | Celera | | | Cytogenetic Map | X | A1.1 | NCBI | | | | | cM Map | X | 8.43 | NCBI | | | | |
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Cask (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 11,572,328 - 11,915,831 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 8,899,500 - 9,243,014 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 8,899,833 - 9,238,694 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 9,082,098 - 9,422,591 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 12,579,235 - 12,919,741 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 8,846,509 - 9,191,254 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 9,815,652 - 10,156,155 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 9,815,652 - 10,156,155 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 9,436,707 - 9,467,884 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 10,614,514 - 10,954,635 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 20,910,960 - 21,250,869 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | X | 20,964,277 - 21,304,187 (+) | NCBI | | | | | Celera | X | 9,439,547 - 9,776,994 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q12 | NCBI | | | | |
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Cask (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955565 | 879,830 - 1,237,692 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955565 | 879,560 - 1,242,727 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CASK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 43,166,165 - 43,573,471 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 43,173,793 - 43,576,833 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 33,967,329 - 34,374,385 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 41,659,295 - 42,066,570 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 41,659,295 - 42,066,570 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CASK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 35,939,117 - 36,296,438 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 35,940,647 - 36,297,014 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 23,287,445 - 23,579,098 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 35,992,809 - 36,371,502 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 35,990,986 - 36,371,431 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 36,067,274 - 36,417,597 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 36,039,464 - 36,395,455 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 36,082,753 - 36,433,406 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cask (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | X | 28,092,601 - 28,440,781 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936502 | 7,937,146 - 8,281,492 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936502 | 7,933,312 - 8,281,492 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CASK (Chlorocebus sabaeus - green monkey) |
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Cask (Heterocephalus glaber - naked mole-rat) |
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