NR3C1 (nuclear receptor subfamily 3 group C member 1) - Rat Genome Database

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Gene: NR3C1 (nuclear receptor subfamily 3 group C member 1) Sus scrofa
Analyze
Symbol: NR3C1
Name: nuclear receptor subfamily 3 group C member 1
RGD ID: 14091863
Description: ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); androgen metabolic process (ortholog); associative learning (ortholog); PARTICIPATES IN cortisol signaling pathway; forkhead class A signaling pathway; prednisolone pharmacodynamics pathway; ASSOCIATED WITH 46, XX Disorders of Sex Development (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: glucocorticoid receptor; glucocorticoid receptor alpha; glucocorticoid receptor variant 1A; glucocorticoid receptor variant 1B; glucocorticoid receptor variant 1C; glucocorticoid receptor variant 1D; glucocorticoid receptor variant 1E; glucocorticoid receptor variant 1F; glucocorticoid receptor variant 1G; glucocorticoid receptor variant 1H; glucocorticoid receptor variant 1H2; glucocorticoid receptor variant 1J; glucocorticoid receptor variant beta; glucocorticoid receptor variant gamma; glucocorticoid receptor variant P; GR; NO; nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2144,822,939 - 144,956,451 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12144,822,937 - 144,956,451 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22151,051,816 - 151,185,046 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
46, XX Disorders of Sex Development  (ISO)
alcohol dependence  (ISO)
alcohol use disorder  (ISO)
alcohol withdrawal syndrome  (ISO)
Alcohol-Related Disorders  (ISO)
Alcoholic Intoxication  (ISO)
alcoholic neuropathy  (ISO)
anorexia nervosa  (ISO)
asthma  (ISO)
atrial fibrillation  (ISO)
attention deficit hyperactivity disorder  (ISO)
Binge Drinking  (ISO)
bipolar disorder  (ISO)
brain ischemia  (ISO)
Burns  (ISO)
cataract  (ISO)
chronic obstructive pulmonary disease  (ISO)
cocaine abuse  (ISO)
cocaine dependence  (ISO)
Cocaine-Related Disorders  (ISO)
cognitive disorder  (ISO)
congestive heart failure  (ISO)
coronary artery disease  (ISO)
Cushing Syndrome  (ISO)
depressive disorder  (ISO)
diabetic retinopathy  (ISO)
Drug-Related Side Effects and Adverse Reactions  (ISO)
Edema  (ISO)
end stage renal disease  (ISO)
endometriosis  (ISO)
Endotoxemia  (ISO)
Experimental Arthritis  (ISO)
Experimental Autoimmune Encephalomyelitis  (ISO)
Experimental Diabetes Mellitus  (ISO)
familial adenomatous polyposis 1  (ISO)
Fetal Growth Retardation  (ISO)
genetic disease  (ISO)
Glucocorticoid Receptor Deficiency  (ISO)
glucose metabolism disease  (ISO)
Hearing Loss, Noise-Induced  (ISO)
Hereditary Neoplastic Syndromes  (ISO)
heroin dependence  (ISO)
hypertension  (ISO)
hypokalemia  (ISO)
interstitial lung disease  (ISO)
lipoid nephrosis  (ISO)
lung disease  (ISO)
lung non-small cell carcinoma  (ISO)
lupus nephritis  (ISO)
major depressive disorder  (ISO)
Malocclusion  (ISO)
Memory Disorders  (ISO)
mood disorder  (ISO)
morphine dependence  (ISO)
muscular atrophy  (ISO)
nephrotic syndrome  (ISO)
nephrotic syndrome type 2  (ISO)
Neurodevelopmental Disorders  (ISO)
nicotine dependence  (ISO)
obesity  (ISO)
obstructive lung disease  (ISO)
obstructive sleep apnea  (ISO)
ocular hypertension  (ISO)
opioid abuse  (ISO)
Perennial Allergic Rhinitis  (ISO)
polycystic ovary syndrome  (ISO)
post-traumatic stress disorder  (ISO)
Postoperative Cognitive Dysfunction  (ISO)
Prenatal Exposure Delayed Effects  (ISO)
primary biliary cholangitis  (ISO)
primary hyperaldosteronism  (ISO)
prostate cancer  (ISO)
Prostatic Neoplasms  (ISO)
psychotic disorder  (ISO)
pulmonary sarcoidosis  (ISO)
renal cell carcinoma  (ISO)
rheumatoid arthritis  (ISO)
schizophrenia  (ISO)
Sepsis  (ISO)
sinusitis  (ISO)
status epilepticus  (ISO)
stress-related disorder  (ISO)
Stroke  (ISO)
Transplant Rejection  (ISO)
traumatic brain injury  (ISO)
type 2 diabetes mellitus  (ISO)
uveitis  (ISO)
visual epilepsy  (ISO)
withdrawal disorder  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adrenal gland development  (IEA,ISO)
androgen metabolic process  (ISO)
associative learning  (ISO)
astrocyte differentiation  (IEA)
cellular response to dexamethasone stimulus  (IEA,ISO)
cellular response to glucocorticoid stimulus  (IEA,ISS)
cellular response to magnesium ion  (ISO)
cellular response to steroid hormone stimulus  (IEA,ISS)
cellular response to transforming growth factor beta stimulus  (IEA)
chromatin organization  (IEA)
chromatin remodeling  (ISO)
circadian rhythm  (ISO)
female pregnancy  (ISO)
gene expression  (IEA,ISO)
glucocorticoid mediated signaling pathway  (IEA)
glucocorticoid metabolic process  (IEA,ISO)
Leydig cell differentiation  (ISO)
lung development  (ISO)
mammary gland duct morphogenesis  (IEA,ISO)
maternal behavior  (IEA,ISO)
microglia differentiation  (IEA)
motor behavior  (IEA)
muscle atrophy  (ISO)
negative regulation of apoptotic process  (ISO)
negative regulation of behavioral fear response  (ISO)
negative regulation of DNA-templated transcription  (IEA)
negative regulation of long-term synaptic depression  (ISO)
negative regulation of synaptic plasticity  (ISO)
negative regulation of transcription by RNA polymerase II  (IEA)
negative regulation of vascular permeability  (ISO)
neuroinflammatory response  (IEA)
nuclear receptor-mediated corticosteroid signaling pathway  (ISO)
nuclear receptor-mediated glucocorticoid signaling pathway  (IEA,ISO)
nuclear receptor-mediated steroid hormone signaling pathway  (IBA)
positive regulation of cell growth involved in cardiac muscle cell development  (ISO)
positive regulation of cytokine production  (ISO)
positive regulation of dendritic spine development  (ISO)
positive regulation of glucocorticoid receptor signaling pathway  (ISO)
positive regulation of glutamate secretion  (ISO)
positive regulation of miRNA transcription  (IEA)
positive regulation of neuron apoptotic process  (IEA,ISO)
positive regulation of transcription by RNA polymerase II  (IEA,ISO,ISS)
regulation of cell population proliferation  (ISO)
regulation of DNA-templated transcription  (IEA,ISO)
regulation of glucocorticoid biosynthetic process  (IEA,ISO)
regulation of gluconeogenesis  (IEA,ISO)
regulation of glucose metabolic process  (ISO)
regulation of transcription by RNA polymerase II  (IBA)
response to activity  (ISO)
response to arsenic-containing substance  (ISO)
response to calcium ion  (ISO)
response to corticosterone  (ISO)
response to cortisol  (ISO)
response to dexamethasone  (ISO)
response to electrical stimulus  (ISO)
response to inactivity  (ISO)
response to insulin  (ISO)
response to mercury ion  (ISO)
response to wounding  (ISO)
synaptic transmission, glutamatergic  (IEA)
transcription initiation-coupled chromatin remodeling  (ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:12904312   PMID:14681463   PMID:16271354   PMID:16421205   PMID:17145712   PMID:22301074   PMID:22792317   PMID:23618392   PMID:23684967   PMID:23950944   PMID:24503296   PMID:26066356  
PMID:28360421  


Genomics

Comparative Map Data
NR3C1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2144,822,939 - 144,956,451 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12144,822,937 - 144,956,451 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22151,051,816 - 151,185,046 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NR3C1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385143,277,931 - 143,435,512 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5143,277,931 - 143,435,512 (-)EnsemblGRCh38hg38GRCh38
GRCh375142,657,496 - 142,815,077 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365142,637,689 - 142,795,270 (-)NCBINCBI36Build 36hg18NCBI36
Build 345142,639,324 - 142,763,087NCBI
Celera5138,738,770 - 138,896,297 (-)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5137,804,733 - 137,962,312 (-)NCBIHuRef
CHM1_15142,091,205 - 142,248,804 (-)NCBICHM1_1
T2T-CHM13v2.05143,809,293 - 143,966,896 (-)NCBIT2T-CHM13v2.0
Nr3c1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391839,543,598 - 39,652,485 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1839,543,598 - 39,652,474 (-)EnsemblGRCm39 Ensembl
GRCm381839,410,545 - 39,519,421 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1839,410,545 - 39,519,421 (-)EnsemblGRCm38mm10GRCm38
MGSCv371839,570,199 - 39,646,899 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361839,537,961 - 39,615,820 (-)NCBIMGSCv36mm8
Celera1840,761,405 - 40,838,026 (-)NCBICelera
Cytogenetic Map18B3NCBI
cM Map1821.09NCBI
Nr3c1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81831,522,783 - 31,644,508 (-)NCBIGRCr8
mRatBN7.21831,271,681 - 31,393,320 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1831,271,681 - 31,393,375 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1831,375,854 - 31,463,901 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01832,142,851 - 32,230,932 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01831,471,103 - 31,559,156 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01831,728,373 - 32,704,022 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1831,728,373 - 31,749,647 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01832,347,227 - 32,348,480 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01831,408,742 - 31,442,725 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41832,371,496 - 32,459,145 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11832,406,765 - 32,494,411 (-)NCBI
Celera1830,905,394 - 30,993,522 (-)NCBICelera
RH 3.4 Map18442.9RGD
Cytogenetic Map18p11NCBI
Nr3c1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541510,494,640 - 10,586,221 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541510,494,704 - 10,585,778 (+)NCBIChiLan1.0ChiLan1.0
NR3C1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24138,522,276 - 138,977,269 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15136,661,826 - 137,116,821 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05138,634,278 - 139,089,171 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15144,741,452 - 144,865,341 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5144,741,452 - 144,865,269 (-)Ensemblpanpan1.1panPan2
NR3C1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1238,124,568 - 38,242,510 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl238,123,190 - 38,240,755 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha235,173,176 - 35,283,390 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0238,573,084 - 38,692,463 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl238,573,084 - 38,690,726 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1235,654,977 - 35,765,222 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0236,468,553 - 36,579,023 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0237,270,194 - 37,380,458 (-)NCBIUU_Cfam_GSD_1.0
Nr3c1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213149,386,116 - 149,482,864 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650410,959,192 - 11,056,856 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650410,960,069 - 11,056,834 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR3C1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12345,904,926 - 46,031,804 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2345,904,873 - 46,031,125 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603431,810,840 - 31,935,849 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nr3c1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247742,495,304 - 2,602,632 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247742,496,276 - 2,603,894 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NR3C1
4137 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001008481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005652952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005652953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005652954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005652955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005652956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005652957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013991680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF141371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ296022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK235893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK343503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK343650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK347247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK391291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK395545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY007222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY779185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU928713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBZA01000439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01102636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JN624280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JQ806110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC329459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U37385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U88894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSSCT00000044530   ⟹   ENSSSCP00000051794
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2144,822,940 - 144,956,451 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000049496   ⟹   ENSSSCP00000046572
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2144,822,939 - 144,930,667 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000094813   ⟹   ENSSSCP00000074875
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2144,826,073 - 144,931,103 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000096719   ⟹   ENSSSCP00000077414
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2144,827,452 - 144,930,425 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000104991   ⟹   ENSSSCP00000080811
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2144,836,748 - 144,956,086 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000106647   ⟹   ENSSSCP00000078198
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2144,822,939 - 144,928,379 (-)Ensembl
RefSeq Acc Id: NM_001008481   ⟹   NP_001008481
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,826,401 - 144,929,697 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652952   ⟹   XP_005653009
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,929,802 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652953   ⟹   XP_005653010
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,931,406 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652954   ⟹   XP_005653011
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,930,646 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652955   ⟹   XP_005653012
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,956,261 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652956   ⟹   XP_005653013
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,931,152 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005652957   ⟹   XP_005653014
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,956,451 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013991680   ⟹   XP_013847134
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,930,382 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021080376   ⟹   XP_020936035
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,931,146 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021080385   ⟹   XP_020936044
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,930,689 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021080403   ⟹   XP_020936062
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,928,857 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021080408   ⟹   XP_020936067
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,931,484 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021080412   ⟹   XP_020936071
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12144,822,937 - 144,930,382 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001008481 (Get FASTA)   NCBI Sequence Viewer  
  XP_005653009 (Get FASTA)   NCBI Sequence Viewer  
  XP_005653010 (Get FASTA)   NCBI Sequence Viewer  
  XP_005653011 (Get FASTA)   NCBI Sequence Viewer  
  XP_005653012 (Get FASTA)   NCBI Sequence Viewer  
  XP_005653013 (Get FASTA)   NCBI Sequence Viewer  
  XP_005653014 (Get FASTA)   NCBI Sequence Viewer  
  XP_013847134 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936035 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936044 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936062 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936067 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936071 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA80538 (Get FASTA)   NCBI Sequence Viewer  
  AAB53274 (Get FASTA)   NCBI Sequence Viewer  
  AAF66595 (Get FASTA)   NCBI Sequence Viewer  
  AAV66324 (Get FASTA)   NCBI Sequence Viewer  
  AFK08608 (Get FASTA)   NCBI Sequence Viewer  
  AFK08609 (Get FASTA)   NCBI Sequence Viewer  
  AFK08610 (Get FASTA)   NCBI Sequence Viewer  
  AFK08611 (Get FASTA)   NCBI Sequence Viewer  
  AFK08612 (Get FASTA)   NCBI Sequence Viewer  
  AFK08613 (Get FASTA)   NCBI Sequence Viewer  
  AFK08614 (Get FASTA)   NCBI Sequence Viewer  
  AGH25595 (Get FASTA)   NCBI Sequence Viewer  
  AGH25596 (Get FASTA)   NCBI Sequence Viewer  
  AGH25597 (Get FASTA)   NCBI Sequence Viewer  
  AGH25598 (Get FASTA)   NCBI Sequence Viewer  
  AGH25599 (Get FASTA)   NCBI Sequence Viewer  
  AGH25600 (Get FASTA)   NCBI Sequence Viewer  
  AGH25601 (Get FASTA)   NCBI Sequence Viewer  
  AGH25602 (Get FASTA)   NCBI Sequence Viewer  
  AGH25603 (Get FASTA)   NCBI Sequence Viewer  
  AGH25604 (Get FASTA)   NCBI Sequence Viewer  
  AGH25605 (Get FASTA)   NCBI Sequence Viewer  
  AGH25606 (Get FASTA)   NCBI Sequence Viewer  
  AGH25607 (Get FASTA)   NCBI Sequence Viewer  
  CAC10271 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000046572
  ENSSSCP00000046572.3
  ENSSSCP00000051794
  ENSSSCP00000051794.3
  ENSSSCP00000074875
  ENSSSCP00000074875.1
  ENSSSCP00000077414
  ENSSSCP00000077414.1
  ENSSSCP00000078198
  ENSSSCP00000078198.1
  ENSSSCP00000080811.1
  ENSSSCP00015026931.1
  ENSSSCP00015027194.1
  ENSSSCP00025028712.1
  ENSSSCP00030025544.1
  ENSSSCP00030025560.1
  ENSSSCP00035024223.1
  ENSSSCP00040025095.1
  ENSSSCP00045007883.1
  ENSSSCP00050027295.1
  ENSSSCP00055007910.1
  ENSSSCP00060036756.1
  ENSSSCP00070006330.1
  ENSSSCP00070006346.1
  ENSSSCP00070006357.1
  ENSSSCP00070006365.1
  ENSSSCP00070006374.1
  ENSSSCP00070006387.1
  ENSSSCP00070006419.1
GenBank Protein JAG69329 (Get FASTA)   NCBI Sequence Viewer  
  Q9N1U3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005653014   ⟸   XM_005652957
- Peptide Label: isoform X2
- UniProtKB: A0A287B660 (UniProtKB/TrEMBL),   A0A8W4FIR0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005653012   ⟸   XM_005652955
- Peptide Label: isoform X1
- UniProtKB: A0A8W4FIR0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936067   ⟸   XM_021080408
- Peptide Label: isoform X8
- UniProtKB: A0A0B8RSH9 (UniProtKB/TrEMBL),   A0A4X1STV1 (UniProtKB/TrEMBL),   A0A4X1SVJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005653010   ⟸   XM_005652953
- Peptide Label: isoform X7
- UniProtKB: A0A8D0UTN0 (UniProtKB/TrEMBL),   A0A8D1ET92 (UniProtKB/TrEMBL),   M4QER0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005653013   ⟸   XM_005652956
- Peptide Label: isoform X3
- UniProtKB: A0A8D1ET92 (UniProtKB/TrEMBL),   M4QER0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936035   ⟸   XM_021080376
- Peptide Label: isoform X4
- UniProtKB: A0A8W4F6Q8 (UniProtKB/TrEMBL),   A0A0B8RSH9 (UniProtKB/TrEMBL),   A0A4X1STV1 (UniProtKB/TrEMBL),   A0A4X1SVJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936044   ⟸   XM_021080385
- Peptide Label: isoform X6
- UniProtKB: A0A287AR79 (UniProtKB/TrEMBL),   A0A0B8RSH9 (UniProtKB/TrEMBL),   A0A4X1STV1 (UniProtKB/TrEMBL),   A0A4X1SVJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005653011   ⟸   XM_005652954
- Peptide Label: isoform X5
- UniProtKB: A0A8D1ET92 (UniProtKB/TrEMBL),   M4QER0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936071   ⟸   XM_021080412
- Peptide Label: isoform X8
- UniProtKB: A0A0B8RSH9 (UniProtKB/TrEMBL),   A0A4X1STV1 (UniProtKB/TrEMBL),   A0A4X1SVJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013847134   ⟸   XM_013991680
- Peptide Label: isoform X7
- UniProtKB: A0A8D0UTN0 (UniProtKB/TrEMBL),   A0A8D1ET92 (UniProtKB/TrEMBL),   M4QER0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005653009   ⟸   XM_005652952
- Peptide Label: isoform X7
- UniProtKB: A0A8D0UTN0 (UniProtKB/TrEMBL),   A0A8D1ET92 (UniProtKB/TrEMBL),   M4QER0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936062   ⟸   XM_021080403
- Peptide Label: isoform X7
- UniProtKB: A0A8D0UTN0 (UniProtKB/TrEMBL),   A0A8D1ET92 (UniProtKB/TrEMBL),   M4QER0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001008481   ⟸   NM_001008481
- UniProtKB: Q5S4M0 (UniProtKB/Swiss-Prot),   P79405 (UniProtKB/Swiss-Prot),   Q9GKZ9 (UniProtKB/Swiss-Prot),   Q9N1U3 (UniProtKB/Swiss-Prot),   A0A0B8RSH9 (UniProtKB/TrEMBL),   A0A4X1STV1 (UniProtKB/TrEMBL),   A0A4X1SVJ0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000046572   ⟸   ENSSSCT00000049496
Ensembl Acc Id: ENSSSCP00000051794   ⟸   ENSSSCT00000044530
Ensembl Acc Id: ENSSSCP00000080811   ⟸   ENSSSCT00000104991
Ensembl Acc Id: ENSSSCP00000078198   ⟸   ENSSSCT00000106647
Ensembl Acc Id: ENSSSCP00000074875   ⟸   ENSSSCT00000094813
Ensembl Acc Id: ENSSSCP00000077414   ⟸   ENSSSCT00000096719
Protein Domains
NR LBD   Nuclear receptor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000014401 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015050050 UniProtKB/TrEMBL
  ENSSSCG00025049087 UniProtKB/TrEMBL
  ENSSSCG00030040281 UniProtKB/TrEMBL
  ENSSSCG00035045340 UniProtKB/TrEMBL
  ENSSSCG00040044557 UniProtKB/TrEMBL
  ENSSSCG00045006941 UniProtKB/TrEMBL
  ENSSSCG00050046673 UniProtKB/TrEMBL
  ENSSSCG00055005080 UniProtKB/TrEMBL
  ENSSSCG00060062142 UniProtKB/TrEMBL
  ENSSSCG00070004047 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000044530 ENTREZGENE
  ENSSSCT00000044530.3 UniProtKB/TrEMBL
  ENSSSCT00000049496 ENTREZGENE
  ENSSSCT00000049496.3 UniProtKB/TrEMBL
  ENSSSCT00000094813 ENTREZGENE
  ENSSSCT00000094813.1 UniProtKB/TrEMBL
  ENSSSCT00000096719 ENTREZGENE
  ENSSSCT00000096719.1 UniProtKB/TrEMBL
  ENSSSCT00000104991.1 UniProtKB/TrEMBL
  ENSSSCT00000106647 ENTREZGENE
  ENSSSCT00000106647.1 UniProtKB/TrEMBL
  ENSSSCT00015067206.1 UniProtKB/TrEMBL
  ENSSSCT00015067904.1 UniProtKB/TrEMBL
  ENSSSCT00025067129.1 UniProtKB/TrEMBL
  ENSSSCT00030056076.1 UniProtKB/TrEMBL
  ENSSSCT00030056118.1 UniProtKB/TrEMBL
  ENSSSCT00035060254.1 UniProtKB/TrEMBL
  ENSSSCT00040059870.1 UniProtKB/TrEMBL
  ENSSSCT00045011601.1 UniProtKB/TrEMBL
  ENSSSCT00050063543.1 UniProtKB/TrEMBL
  ENSSSCT00055010000.1 UniProtKB/TrEMBL
  ENSSSCT00060084950.1 UniProtKB/TrEMBL
  ENSSSCT00070007706.1 UniProtKB/TrEMBL
  ENSSSCT00070007722.1 UniProtKB/TrEMBL
  ENSSSCT00070007735.1 UniProtKB/TrEMBL
  ENSSSCT00070007742.1 UniProtKB/TrEMBL
  ENSSSCT00070007752.1 UniProtKB/TrEMBL
  ENSSSCT00070007766.1 UniProtKB/TrEMBL
  ENSSSCT00070007803.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Glcrtcd_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NHR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hormone_rcpt_NR3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:396740 UniProtKB/Swiss-Prot
NCBI Gene NR3C1 ENTREZGENE
PANTHER GLUCOCORTICOID RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KNIRPS-RELATED PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GCR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hormone_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS GLCORTICOIDR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STRDHORMONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOLI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0B8RSH9 ENTREZGENE
  A0A287AR79 ENTREZGENE, UniProtKB/TrEMBL
  A0A287B660 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1STV1 ENTREZGENE
  A0A4X1SVJ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0JM44_PIG UniProtKB/TrEMBL
  A0A8D0P0S5_PIG UniProtKB/TrEMBL
  A0A8D0P6P2_PIG UniProtKB/TrEMBL
  A0A8D0UTN0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0WV83_PIG UniProtKB/TrEMBL
  A0A8D1A0N5_PIG UniProtKB/TrEMBL
  A0A8D1ET92 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4F6Q8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FGH5_PIG UniProtKB/TrEMBL
  A0A8W4FIR0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FMU7_PIG UniProtKB/TrEMBL
  GCR_PIG UniProtKB/Swiss-Prot
  I3QHY2_PIG UniProtKB/TrEMBL
  M4QCI8_PIG UniProtKB/TrEMBL
  M4QCJ2_PIG UniProtKB/TrEMBL
  M4QER0 ENTREZGENE, UniProtKB/TrEMBL
  M4QG32_PIG UniProtKB/TrEMBL
  P79405 ENTREZGENE
  Q5S4M0 ENTREZGENE
  Q9GKZ9 ENTREZGENE
  Q9N1U3 ENTREZGENE
UniProt Secondary P79405 UniProtKB/Swiss-Prot
  Q5S4M0 UniProtKB/Swiss-Prot
  Q9GKZ9 UniProtKB/Swiss-Prot
VGNC ID VGNC:90883 ENTREZGENE