PPARG (peroxisome proliferator activated receptor gamma) - Rat Genome Database

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Gene: PPARG (peroxisome proliferator activated receptor gamma) Sus scrofa
Analyze
Symbol: PPARG
Name: peroxisome proliferator activated receptor gamma
RGD ID: 14042986
Description: ENCODES a protein that exhibits nuclear receptor activity; alpha-actinin binding (ortholog); arachidonate binding (ortholog); INVOLVED IN negative regulation of gene expression; positive regulation of cholesterol efflux; positive regulation of DNA-templated transcription; PARTICIPATES IN DNA modification pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN nucleus; cytosol (ortholog); perinuclear region of cytoplasm (ortholog); INTERACTS WITH 1,3-thiazolidine-2,4-dione; arotinoid acid; Bisphenol A diglycidyl ether
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: NR1C3; nuclear receptor subfamily 1 group C member 3; peroxisome proliferator activatived receptor gamma; peroxisome proliferator-activated receptor gamma; peroxisome proliferator-activated receptor gamma 1; peroxisome proliferator-activated receptor gamma 2; PPAR-gamma
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1368,302,322 - 68,433,944 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11368,301,566 - 68,433,951 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21375,515,515 - 75,650,251 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
abdominal obesity-metabolic syndrome  (ISO)
acute kidney failure  (ISO)
Acute Lung Injury  (ISO)
acute promyelocytic leukemia  (ISO)
adenocarcinoma  (ISO)
alcoholic cardiomyopathy  (ISO)
Alveolar Bone Loss  (ISO)
Alzheimer's disease  (ISO)
antiphospholipid syndrome  (ISO)
arteriosclerosis  (ISO)
atherosclerosis  (ISO)
autosomal dominant polycystic kidney disease  (ISO)
Barrett's esophagus  (ISO)
cardiovascular system disease  (ISO)
carotid artery disease  (ISO)
Carotid Artery Injuries  (ISO)
Carotid Intimal Medial Thickness 1  (ISO)
Chemical and Drug Induced Liver Injury  (ISO)
Chronic Allograft Nephropathy  (ISO)
Chronobiology Disorders  (ISO)
cognitive disorder  (ISO)
colon cancer  (ISO)
colon carcinoma  (ISO)
Colonic Neoplasms  (ISO)
Colorectal Neoplasms  (ISO)
congenital generalized lipodystrophy type 2  (ISO)
congestive heart failure  (ISO)
corneal neovascularization  (ISO)
coronary artery disease  (ISO)
COVID-19  (ISO)
Crohn's disease  (ISO)
diabetes mellitus  (ISO)
diabetic encephalopathy  (ISO)
Diabetic Nephropathies  (ISO)
diabetic retinopathy  (ISO)
disease of metabolism  (ISO)
Dyslipidemias  (ISO)
end stage renal disease  (ISO)
Endotoxemia  (ISO)
Experimental Autoimmune Myocarditis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Liver Cirrhosis  (ISO)
Eye Burns  (ISO)
Eye Injuries  (ISO)
familial partial lipodystrophy  (ISO)
familial partial lipodystrophy type 3  (ISO)
Fetal Growth Retardation  (ISO)
Fibrosis  (ISO)
Follicular Thyroid Cancer  (ISO)
genetic disease  (ISO)
glioblastoma  (ISO)
glomerulonephritis  (ISO)
glomerulosclerosis  (ISO)
Graves ophthalmopathy  (ISO)
hepatocellular carcinoma  (ISO)
high grade glioma  (ISO)
hyperandrogenism  (ISO)
hypertension  (ISO)
Inflammation  (ISO)
Insulin Resistance  (ISO)
ischemia  (ISO)
kidney failure  (ISO)
Left Ventricular Hypertrophy  (ISO)
leukostasis  (ISO)
lipid storage disease  (ISO)
lipodystrophy  (ISO)
Liver Neoplasms  (ISO)
Lymphatic Metastasis  (ISO)
maturity-onset diabetes of the young type 1  (ISO)
melanoma  (ISO)
metabolic dysfunction-associated steatotic liver disease  (ISO)
Metabolic Syndrome  (ISO)
morbid obesity  (ISO)
Myocardial Reperfusion Injury  (ISO)
Nerve Degeneration  (ISO)
obesity  (ISO)
osteoarthritis  (ISO)
Oxygen-Induced Retinopathy  (ISO)
Pain  (ISO)
pancreatic cancer  (ISO)
pancreatic ductal carcinoma  (ISO)
pancreatitis  (ISO)
Perennial Allergic Rhinitis  (ISO)
pituitary-dependent Cushing's disease  (ISO)
polycystic kidney disease  (ISO)
pre-eclampsia  (ISO)
primary pulmonary hypertension  (ISO)
proliferative diabetic retinopathy  (ISO)
psoriasis  (ISO)
Reperfusion Injury  (ISO)
steatotic liver disease  (ISO)
Stomach Neoplasms  (ISO)
Subarachnoid Hemorrhage  (ISO)
systemic lupus erythematosus  (ISO)
T-cell non-Hodgkin lymphoma  (ISO)
Thyroid Neoplasms  (ISO)
transient cerebral ischemia  (ISO)
type 2 diabetes mellitus  (ISO)
urinary bladder cancer  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
animal organ regeneration  (ISO)
BMP signaling pathway  (ISO)
brown fat cell differentiation  (ISO)
cell differentiation  (IBA)
cell fate commitment  (ISO)
cell maturation  (ISO)
cell population proliferation  (ISO)
cellular response to hyperoxia  (ISO)
cellular response to hypoxia  (ISO)
cellular response to insulin stimulus  (ISO,ISS)
cellular response to lithium ion  (ISO)
cellular response to low-density lipoprotein particle stimulus  (ISO)
cellular response to organic cyclic compound  (ISO)
cellular response to platelet-derived growth factor stimulus  (ISO)
cellular response to prostaglandin E stimulus  (ISO)
cellular response to prostaglandin stimulus  (ISO)
cellular response to retinoic acid  (ISO)
cellular response to vitamin E  (ISO)
cold-induced thermogenesis  (ISO)
diet induced thermogenesis  (ISO)
epithelial cell differentiation  (ISO)
epithelial cell proliferation  (ISO)
fat cell differentiation  (ISO)
fatty acid metabolic process  (IBA)
fatty acid oxidation  (ISO)
glucose homeostasis  (ISO)
heart development  (ISO)
hormone-mediated signaling pathway  (IBA)
intracellular receptor signaling pathway  (IEA)
lipoprotein transport  (ISO)
long-chain fatty acid transport  (ISO)
monocyte differentiation  (ISO)
mRNA transcription by RNA polymerase II  (ISO)
negative regulation of acute inflammatory response  (ISO)
negative regulation of angiogenesis  (ISO)
negative regulation of blood vessel endothelial cell migration  (ISO)
negative regulation of BMP signaling pathway  (ISO)
negative regulation of cardiac muscle hypertrophy in response to stress  (ISO)
negative regulation of cell growth  (ISO)
negative regulation of cell population proliferation  (ISO)
negative regulation of cellular response to insulin stimulus  (ISO)
negative regulation of cellular response to transforming growth factor beta stimulus  (ISO)
negative regulation of cholesterol storage  (IBA)
negative regulation of collagen biosynthetic process  (ISO)
negative regulation of connective tissue replacement involved in inflammatory response wound healing  (ISO)
negative regulation of cytokine production  (ISO)
negative regulation of DNA-templated transcription  (ISO)
negative regulation of epithelial cell proliferation  (ISO)
negative regulation of extracellular matrix assembly  (ISO)
negative regulation of gene expression  (IMP,ISO)
negative regulation of inflammatory response  (IBA)
negative regulation of lipid storage  (ISO)
negative regulation of macrophage derived foam cell differentiation  (ISO)
negative regulation of MAPK cascade  (ISO)
negative regulation of microglial cell activation  (ISO)
negative regulation of miRNA transcription  (ISO)
negative regulation of mitochondrial fission  (ISO)
negative regulation of neuroinflammatory response  (ISO)
negative regulation of osteoblast differentiation  (ISO)
negative regulation of pancreatic stellate cell proliferation  (ISO)
negative regulation of peptide hormone secretion  (ISO)
negative regulation of receptor signaling pathway via STAT  (ISO)
negative regulation of sequestering of triglyceride  (ISO)
negative regulation of signaling receptor activity  (ISO)
negative regulation of SMAD protein signal transduction  (ISO)
negative regulation of smooth muscle cell migration  (ISO)
negative regulation of smooth muscle cell proliferation  (ISO)
negative regulation of transcription by RNA polymerase II  (IBA,ISO)
negative regulation of transforming growth factor beta receptor signaling pathway  (ISO)
negative regulation of type II interferon-mediated signaling pathway  (ISO)
negative regulation of vascular associated smooth muscle cell proliferation  (ISO)
negative regulation of vascular endothelial cell proliferation  (ISO)
peroxisome proliferator activated receptor signaling pathway  (ISO,ISS)
placenta development  (ISO)
positive regulation of adiponectin secretion  (ISO)
positive regulation of adipose tissue development  (ISO)
positive regulation of apoptotic process  (ISO)
positive regulation of apoptotic signaling pathway  (ISO)
positive regulation of cholesterol efflux  (IMP,ISO)
positive regulation of cholesterol transport  (ISO)
positive regulation of DNA-templated transcription  (IMP,ISO,ISS)
positive regulation of fat cell differentiation  (ISO)
positive regulation of fatty acid metabolic process  (IBA)
positive regulation of fatty acid oxidation  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of intracellular cholesterol transport  (IMP)
positive regulation of low-density lipoprotein receptor activity  (ISO)
positive regulation of miRNA transcription  (ISO)
positive regulation of oligodendrocyte differentiation  (ISO)
positive regulation of phagocytosis, engulfment  (ISO)
positive regulation of prostaglandin biosynthetic process  (IMP)
positive regulation of protein secretion  (IMP)
positive regulation of SMAD protein signal transduction  (ISO)
positive regulation of transcription by RNA polymerase II  (IBA,IDA,ISO)
positive regulation of vascular associated smooth muscle cell apoptotic process  (ISO)
regulation of blood pressure  (ISO)
regulation of circadian rhythm  (ISS)
regulation of DNA-templated transcription  (IEA)
regulation of fat cell differentiation  (ISO)
regulation of gene expression  (ISO)
regulation of lipid metabolic process  (ISO)
regulation of protein localization to plasma membrane  (IMP)
regulation of transcription by RNA polymerase II  (IEA,ISO,ISS)
response to caffeine  (ISO)
response to dietary excess  (ISO)
response to estrogen  (ISO)
response to food  (ISO)
response to immobilization stress  (ISO)
response to light stimulus  (ISO)
response to linoleic acid  (ISO)
response to lipid  (ISO)
response to mechanical stimulus  (ISO)
response to organic cyclic compound  (ISO)
response to starvation  (ISO)
response to vitamin A  (ISO)
response to xenobiotic stimulus  (ISO)
retinoic acid receptor signaling pathway  (IDA)
rhythmic process  (IEA)
signal transduction  (ISO)
white fat cell differentiation  (ISO)
wound healing involved in inflammatory response  (ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:9731203   PMID:9931452   PMID:10481259   PMID:14681463   PMID:16130456   PMID:16239304   PMID:16530456   PMID:17318406   PMID:19474210   PMID:19562688   PMID:19926833   PMID:20484463  
PMID:20878476   PMID:21205430   PMID:21703776   PMID:22204804   PMID:22301074   PMID:23296834   PMID:24096891   PMID:24287039   PMID:25034013   PMID:25251288   PMID:25646693   PMID:26944559  
PMID:27638309   PMID:28257428   PMID:28677792   PMID:28882569   PMID:29550794   PMID:30032202   PMID:30656515   PMID:30772521  


Genomics

Comparative Map Data
PPARG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1368,302,322 - 68,433,944 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11368,301,566 - 68,433,951 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21375,515,515 - 75,650,251 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PPARG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38312,287,368 - 12,434,344 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl312,287,368 - 12,434,356 (+)EnsemblGRCh38hg38GRCh38
GRCh37312,328,867 - 12,475,843 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36312,304,349 - 12,450,855 (+)NCBINCBI36Build 36hg18NCBI36
Build 34312,304,423 - 12,450,840NCBI
Celera312,266,744 - 12,413,226 (+)NCBICelera
Cytogenetic Map3p25.2NCBI
HuRef312,263,090 - 12,409,169 (+)NCBIHuRef
CHM1_1312,279,448 - 12,425,942 (+)NCBICHM1_1
T2T-CHM13v2.0312,285,564 - 12,432,191 (+)NCBIT2T-CHM13v2.0
Pparg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396115,337,828 - 115,467,365 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6115,337,912 - 115,467,360 (+)EnsemblGRCm39 Ensembl
GRCm386115,360,879 - 115,490,404 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6115,360,951 - 115,490,399 (+)EnsemblGRCm38mm10GRCm38
MGSCv376115,311,239 - 115,440,419 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366115,387,692 - 115,456,020 (+)NCBIMGSCv36mm8
Celera6117,199,637 - 117,329,691 (+)NCBICelera
Cytogenetic Map6E3NCBI
cM Map653.41NCBI
Pparg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84150,095,743 - 150,221,104 (+)NCBIGRCr8
mRatBN7.24148,423,102 - 148,548,471 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4148,423,194 - 148,548,468 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4154,648,115 - 154,772,735 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04150,431,203 - 150,555,814 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04149,055,023 - 149,179,637 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04147,274,055 - 147,399,383 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4147,274,107 - 147,399,380 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04210,562,928 - 210,688,585 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44151,492,220 - 151,617,331 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14151,796,047 - 151,862,171 (+)NCBI
Celera4137,316,681 - 137,440,473 (+)NCBICelera
Cytogenetic Map4q42NCBI
Pparg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542914,873,908 - 14,937,387 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542914,814,690 - 14,936,869 (+)NCBIChiLan1.0ChiLan1.0
PPARG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2212,275,725 - 12,421,769 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1312,280,497 - 12,426,762 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0312,215,322 - 12,361,669 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1312,560,670 - 12,705,060 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl312,622,397 - 12,705,060 (+)Ensemblpanpan1.1panPan2
PPARG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1206,134,618 - 6,265,481 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl206,050,357 - 6,207,981 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha206,170,697 - 6,244,070 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0206,163,453 - 6,294,865 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl206,163,453 - 6,236,837 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1205,878,834 - 5,952,191 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0206,232,700 - 6,306,060 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0206,208,181 - 6,281,750 (-)NCBIUU_Cfam_GSD_1.0
Pparg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494217,541,121 - 17,706,796 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366021,230,907 - 1,304,743 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366021,230,907 - 1,368,588 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPARG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12248,262,743 - 48,407,415 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2248,275,600 - 48,407,418 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041118,092,724 - 118,237,828 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pparg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462495683,842 - 149,481 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462495684,673 - 207,176 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PPARG
2131 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 16 3 2 5 14 12 16 3 6 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_214379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005669783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005669784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005669788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005669789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013981980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013981981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013981982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB097926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB097927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB097928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB097929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB097930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEMK02000087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF059245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF103946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF203421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ006756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ006757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ006758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK230961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK237617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK389674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU856559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU915692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ013884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ437884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ437885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01048763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KM382175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSSCT00000012672   ⟹   ENSSSCP00000012339
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1368,363,873 - 68,433,939 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000037011   ⟹   ENSSSCP00000052656
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1368,363,873 - 68,433,508 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000038744   ⟹   ENSSSCP00000031550
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1368,302,658 - 68,433,939 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000097211   ⟹   ENSSSCP00000078837
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1368,302,322 - 68,433,944 (+)Ensembl
RefSeq Acc Id: NM_214379   ⟹   NP_999544
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11368,364,001 - 68,433,947 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005669783   ⟹   XP_005669840
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11368,301,566 - 68,433,951 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005669784   ⟹   XP_005669841
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11368,302,545 - 68,433,947 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005669788   ⟹   XP_005669845
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11368,301,575 - 68,433,947 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005669789   ⟹   XP_005669846
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11368,302,544 - 68,433,947 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013981980   ⟹   XP_013837434
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11368,344,359 - 68,433,947 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013981981   ⟹   XP_013837435
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11368,363,831 - 68,433,947 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013981982   ⟹   XP_013837436
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11368,383,072 - 68,433,947 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_999544 (Get FASTA)   NCBI Sequence Viewer  
  XP_005669840 (Get FASTA)   NCBI Sequence Viewer  
  XP_005669841 (Get FASTA)   NCBI Sequence Viewer  
  XP_005669845 (Get FASTA)   NCBI Sequence Viewer  
  XP_005669846 (Get FASTA)   NCBI Sequence Viewer  
  XP_013837434 (Get FASTA)   NCBI Sequence Viewer  
  XP_013837435 (Get FASTA)   NCBI Sequence Viewer  
  XP_013837436 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC14348 (Get FASTA)   NCBI Sequence Viewer  
  AAD19577 (Get FASTA)   NCBI Sequence Viewer  
  AAG35636 (Get FASTA)   NCBI Sequence Viewer  
  AAY40277 (Get FASTA)   NCBI Sequence Viewer  
  ABE01102 (Get FASTA)   NCBI Sequence Viewer  
  ABE01103 (Get FASTA)   NCBI Sequence Viewer  
  AIX87990 (Get FASTA)   NCBI Sequence Viewer  
  BAD20642 (Get FASTA)   NCBI Sequence Viewer  
  BAD20643 (Get FASTA)   NCBI Sequence Viewer  
  BAD20644 (Get FASTA)   NCBI Sequence Viewer  
  BAD20645 (Get FASTA)   NCBI Sequence Viewer  
  BAD20646 (Get FASTA)   NCBI Sequence Viewer  
  CAA07224 (Get FASTA)   NCBI Sequence Viewer  
  CAA07225 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000012339
  ENSSSCP00000012339.4
  ENSSSCP00000012339.5
  ENSSSCP00000031550
  ENSSSCP00000031550.2
  ENSSSCP00000031550.3
  ENSSSCP00000052656.3
  ENSSSCP00000078837
  ENSSSCP00000078837.1
  ENSSSCP00025044767.1
  ENSSSCP00025044822.1
  ENSSSCP00025044870.1
  ENSSSCP00040027787.1
  ENSSSCP00055015667.1
  ENSSSCP00065019910.1
  ENSSSCP00070027999.1
  ENSSSCP00070028013.1
  ENSSSCP00070028026.1
  ENSSSCP00070028038.1
  ENSSSCP00070028059.1
  ENSSSCP00070028066.1
GenBank Protein O62807 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005669840   ⟸   XM_005669783
- Peptide Label: isoform X1
- UniProtKB: Q6L9M5 (UniProtKB/TrEMBL),   A0A8D0JD20 (UniProtKB/TrEMBL),   Q1W4T3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005669845   ⟸   XM_005669788
- Peptide Label: isoform X1
- UniProtKB: Q6L9M5 (UniProtKB/TrEMBL),   A0A8D0JD20 (UniProtKB/TrEMBL),   Q1W4T3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005669846   ⟸   XM_005669789
- Peptide Label: isoform X1
- UniProtKB: Q6L9M5 (UniProtKB/TrEMBL),   A0A8D0JD20 (UniProtKB/TrEMBL),   Q1W4T3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005669841   ⟸   XM_005669784
- Peptide Label: isoform X1
- UniProtKB: Q6L9M5 (UniProtKB/TrEMBL),   A0A8D0JD20 (UniProtKB/TrEMBL),   Q1W4T3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013837434   ⟸   XM_013981980
- Peptide Label: isoform X1
- UniProtKB: Q6L9M5 (UniProtKB/TrEMBL),   A0A8D0JD20 (UniProtKB/TrEMBL),   Q1W4T3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013837435   ⟸   XM_013981981
- Peptide Label: isoform X1
- UniProtKB: Q6L9M5 (UniProtKB/TrEMBL),   A0A8D0JD20 (UniProtKB/TrEMBL),   Q1W4T3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_999544   ⟸   NM_214379
- UniProtKB: O77815 (UniProtKB/Swiss-Prot),   Q6L9M2 (UniProtKB/Swiss-Prot),   O62807 (UniProtKB/Swiss-Prot),   A0A8D0JI51 (UniProtKB/TrEMBL),   A0A8D1EX50 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013837436   ⟸   XM_013981982
- Peptide Label: isoform X1
- UniProtKB: Q6L9M5 (UniProtKB/TrEMBL),   A0A8D0JD20 (UniProtKB/TrEMBL),   Q1W4T3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000052656   ⟸   ENSSSCT00000037011
Ensembl Acc Id: ENSSSCP00000012339   ⟸   ENSSSCT00000012672
Ensembl Acc Id: ENSSSCP00000031550   ⟸   ENSSSCT00000038744
Ensembl Acc Id: ENSSSCP00000078837   ⟸   ENSSSCT00000097211
Protein Domains
NR LBD   Nuclear receptor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000011579 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00025073565 UniProtKB/TrEMBL
  ENSSSCG00040048265 UniProtKB/TrEMBL
  ENSSSCG00055010097 UniProtKB/Swiss-Prot
  ENSSSCG00065034050 UniProtKB/Swiss-Prot
  ENSSSCG00070016976 UniProtKB/Swiss-Prot
Ensembl Transcript ENSSSCT00000012672 ENTREZGENE
  ENSSSCT00000012672.4 UniProtKB/TrEMBL
  ENSSSCT00000012672.5 UniProtKB/Swiss-Prot
  ENSSSCT00000037011.3 UniProtKB/TrEMBL
  ENSSSCT00000038744 ENTREZGENE
  ENSSSCT00000038744.2 UniProtKB/TrEMBL
  ENSSSCT00000038744.3 UniProtKB/Swiss-Prot
  ENSSSCT00000097211 ENTREZGENE
  ENSSSCT00000097211.1 UniProtKB/TrEMBL
  ENSSSCT00025101290.1 UniProtKB/TrEMBL
  ENSSSCT00025101407.1 UniProtKB/TrEMBL
  ENSSSCT00025101503.1 UniProtKB/TrEMBL
  ENSSSCT00040065613.1 UniProtKB/TrEMBL
  ENSSSCT00055019853.1 UniProtKB/Swiss-Prot
  ENSSSCT00065046377.1 UniProtKB/Swiss-Prot
  ENSSSCT00070033522.1 UniProtKB/Swiss-Prot
  ENSSSCT00070033549.1 UniProtKB/Swiss-Prot
  ENSSSCT00070033567.1 UniProtKB/Swiss-Prot
  ENSSSCT00070033589.1 UniProtKB/Swiss-Prot
  ENSSSCT00070033621.1 UniProtKB/Swiss-Prot
  ENSSSCT00070033629.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro 1Cnucl_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NHR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hormone_rcpt_NR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PPAR-gamma UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PPARgamma_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:397671 UniProtKB/Swiss-Prot
NCBI Gene PPARG ENTREZGENE
PANTHER NUCLEAR HORMONE RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PPARgamma_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS PROXISOMEPAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROXISOMPAGR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STRDHORMONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOLI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A480EDI2_PIG UniProtKB/TrEMBL
  A0A480KZ86_PIG UniProtKB/TrEMBL
  A0A5S6G9R0_PIG UniProtKB/TrEMBL
  A0A5S6GZY3_PIG UniProtKB/TrEMBL
  A0A5S6I604_PIG UniProtKB/TrEMBL
  A0A8D0JD20 ENTREZGENE
  A0A8D0JI51 ENTREZGENE
  A0A8D0TEC6_PIG UniProtKB/TrEMBL
  A0A8D0TJ66_PIG UniProtKB/TrEMBL
  A0A8D0V183_PIG UniProtKB/TrEMBL
  A0A8D1EX50 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FHC8_PIG UniProtKB/TrEMBL
  O62807 ENTREZGENE
  O77815 ENTREZGENE
  PPARG_PIG UniProtKB/Swiss-Prot
  Q1W4T2_PIG UniProtKB/TrEMBL
  Q1W4T3 ENTREZGENE, UniProtKB/TrEMBL
  Q6L9M2 ENTREZGENE
  Q6L9M5 ENTREZGENE, UniProtKB/TrEMBL
  Q9GKL3_PIG UniProtKB/TrEMBL
UniProt Secondary O77815 UniProtKB/Swiss-Prot
  Q6L9M2 UniProtKB/Swiss-Prot
VGNC ID VGNC:91684 ENTREZGENE