RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
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Ngf
nerve growth factor
ISO
RGD
PMID:23288991
RGD:402463956
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
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A2m
alpha-2-macroglobulin
treatment
ISO
RGD
PMID:10848441
RGD:10046010
NCBI chr 4:154,897,770...154,947,787
Ensembl chr 4:154,897,877...154,947,786
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Cat
catalase
ISO
associated withDiabetes Mellitus, Type 2; mRNA,protein:decreased expression, decreased activity:blood,l serum:
RGD
PMID:24092995
RGD:9068931
NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478
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Flt1
Fms related receptor tyrosine kinase 1
ISO
protein:decreased expression:aqueous humor:
RGD
PMID:23853629
RGD:10402120
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
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Map3k8
mitogen-activated protein kinase kinase kinase 8
ISO
protein:increased activity:serum:
RGD
PMID:28724746
RGD:151356966
NCBI chr17:53,382,908...53,403,216
Ensembl chr17:53,383,131...53,403,216
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Pdgfb
platelet derived growth factor subunit B
ISO
protein:decreased expression:vitreous:
RGD
PMID:19799585
RGD:10449447
NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
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Proc
protein C, inactivator of coagulation factors Va and VIIIa
treatment
ISO
RGD
PMID:20688738
RGD:11100028
NCBI chr18:23,764,367...23,774,816
Ensembl chr18:23,764,368...23,775,133
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Serpinf1
serpin family F member 1
IEP
protein:increased expression:neuroretina (rat)
RGD
PMID:21487926
RGD:5490120
NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
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Ctc1
CST telomere replication complex component 1
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Coats plus syndrome
CTD ClinVar
PMID:22267198 PMID:22387016 PMID:23220793 PMID:23869908 PMID:24033266 PMID:25182133 PMID:25741868 PMID:28492532 PMID:30891747 More...
NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298
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Stn1
STN1 subunit of CST complex
ISO
CTD Direct Evidence: marker/mechanism
CTD
NCBI chr 1:246,391,311...246,429,844
Ensembl chr 1:246,395,613...246,429,531
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Ctc1
CST telomere replication complex component 1
ISO
ClinVar Annotator: match by term: CTC1-related condition | ClinVar Annotator: match by term: Cerebroretinal microangiopathy with calcifications and cysts 1
OMIM ClinVar
PMID:9536098 PMID:16199547 PMID:16943371 PMID:17576681 PMID:18076099 PMID:22267198 PMID:22387016 PMID:22532422 PMID:22899577 PMID:23869908 PMID:24033266 PMID:24115768 PMID:25182133 PMID:25197929 PMID:25741868 PMID:25843205 PMID:28492532 PMID:28864049 PMID:29111009 PMID:29146883 PMID:29228254 PMID:29481669 PMID:30523342 PMID:30891747 PMID:33510405 PMID:34573280 PMID:34706368 More...
NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298
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Pfas
phosphoribosylformylglycinamidine synthase
ISO
ClinVar Annotator: match by term: CTC1-related condition | ClinVar Annotator: match by term: Cerebroretinal microangiopathy with calcifications and cysts 1
ClinVar
PMID:22267198 PMID:22387016 PMID:24115768 PMID:25741868 PMID:28492532 PMID:29481669 More...
NCBI chr10:53,690,301...53,711,811
Ensembl chr10:53,691,626...53,708,420
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Stn1
STN1 subunit of CST complex
ISO
ClinVar Annotator: match by term: Cerebroretinal microangiopathy with calcifications and cysts 2
OMIM ClinVar
PMID:25741868 PMID:27432940 PMID:28492532
NCBI chr 1:246,391,311...246,429,844
Ensembl chr 1:246,395,613...246,429,531
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Pot1
protection of telomeres 1
ISO
ClinVar Annotator: match by term: Cerebroretinal microangiopathy with calcifications and cysts 3
ClinVar OMIM
PMID:27013236 PMID:28492532
NCBI chr 4:54,205,330...54,263,137
Ensembl chr 4:54,205,332...54,263,042
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Lrrc32
leucine rich repeat containing 32
ISO
ClinVar Annotator: match by term: Cleft palate, proliferative retinopathy, and developmental delay
OMIM ClinVar
PMID:25741868 PMID:30976112
NCBI chr 1:152,785,709...152,802,997
Ensembl chr 1:152,786,511...152,798,373
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Fzd4
frizzled class receptor 4
ISO
ClinVar Annotator: match by term: Coats disease
ClinVar
PMID:14507768 PMID:15035989 PMID:17955262 PMID:20340138 PMID:20938005 PMID:24033266 PMID:24744206 PMID:25711638 PMID:25741868 PMID:26908610 PMID:27316669 PMID:28492532 PMID:30452590 PMID:31294129 More...
NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
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Ndp
norrin cystine knot growth factor NDP
ISO
ClinVar Annotator: match by term: Exudative retinopathy
ClinVar
PMID:26908610
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
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Pcdh12
protocadherin 12
ISO
ClinVar Annotator: match by term: Exudative retinopathy
ClinVar
PMID:25741868 PMID:30459466
NCBI chr18:30,103,728...30,119,307
Ensembl chr18:30,103,728...30,119,307
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Prss23
serine protease 23
ISO
ClinVar Annotator: match by term: Coats disease
ClinVar
PMID:14507768 PMID:15035989 PMID:17955262 PMID:20340138 PMID:20938005 PMID:24033266 PMID:24744206 PMID:25711638 PMID:25741868 PMID:26908610 PMID:27316669 PMID:28492532 PMID:30452590 PMID:31294129 More...
NCBI chr 1:143,402,725...143,422,182
Ensembl chr 1:143,401,396...143,422,091
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Rcbtb1
RCC1 and BTB domain containing protein 1
ISO
ClinVar Annotator: match by term: Coats disease | ClinVar Annotator: match by term: Exudative retinopathy
ClinVar
PMID:25741868 PMID:26908610 PMID:28492532 PMID:31494449
NCBI chr15:33,319,586...33,362,421
Ensembl chr15:33,319,586...33,365,302
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Rho
rhodopsin
ISO
ClinVar Annotator: match by term: Exudative retinopathy
ClinVar
PMID:7987331 PMID:9380676 PMID:10967073 PMID:25741868 PMID:28492532 PMID:30977563 More...
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
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Rnf14
ring finger protein 14
ISO
ClinVar Annotator: match by term: Exudative retinopathy
ClinVar
PMID:25741868 PMID:30459466
NCBI chr18:30,131,627...30,155,686
Ensembl chr18:30,131,691...30,155,685
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Ace
angiotensin I converting enzyme
susceptibility no_association
ISO
associated with Diabetes Mellitus, Type 2;DNA:deletion:intron:IVS16+1464-1751del (human) associated with Diabetes Mellitus, Type 1;DNA:deletion:intron:IVS16+1464-1751del (human) associated with Diabetes Mellitus, Type 2;DNA:snp:exon:g.2350G>A (rs4343) (human) associated with Diabetes Mellitus, Type 2;protein:increased expression:serum (human)
GAD RGD
PMID:15118671 PMID:11106834 PMID:7729604 PMID:23065222 PMID:2157294
RGD:1331525 , RGD:7829783 , RGD:7829780 , RGD:7829794 , RGD:8142360
NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
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Ace2
angiotensin converting enzyme 2
treatment
ISO
associated with Diabetes Mellitus, Experimental human gene in a mouse model CTD Direct Evidence: therapeutic
CTD RGD
PMID:31380462 PMID:21792177 PMID:31380462
RGD:8548900 , RGD:40818278
NCBI chr X:30,293,597...30,340,961
Ensembl chr X:30,293,589...30,340,977
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Acp1
acid phosphatase 1
ISO
associated with Diabetes Mellitus, Insulin-Dependent
RGD
PMID:12495297
RGD:2313184
NCBI chr 6:47,506,380...47,522,021
Ensembl chr 6:47,506,380...47,522,021
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Adipoq
adiponectin, C1Q and collagen domain containing
disease_progression
ISO
associated with Diabetes Mellitus, Type 2;DNA:SNP: :g.45T>G (human) associated with Diabetes Mellitus, Type 2;protein:increased expression:serum
RGD
PMID:24655058 PMID:17970779
RGD:8694412 , RGD:8694475
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
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Adm
adrenomedullin
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:increased expression:plasma
RGD
PMID:19216096
RGD:2313312
NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
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Adrb3
adrenoceptor beta 3
ISO
associated with Diabetes Mellitus, Type 2; DNA:missense mutation:cds:p.W64R rs4994 (human)
RGD
PMID:9313761
RGD:5684400
NCBI chr16:64,839,820...64,844,552
Ensembl chr16:64,841,788...64,844,552
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Ager
advanced glycosylation end product-specific receptor
no_association treatment severity susceptibility
ISO IDA IEP
associated with Diabetes Mellitus, Type 2;DNA:polymorphisms: :p.G82S, 1704G>T, 2184A>G (human) associated with Diabetes Mellitus, Experimental associated with Diabetes Mellitus, Type 2;DNA:SNP: :2245G>A (human) associated with Diabetes Mellitus, Type 2;DNA:SNP:promoter:-429T>C (human) associated with Diabetes Mellitus, Type 2;DNA:SNP:promoter:-374T>A, - 429T>C (human) associated with Diabetes Mellitus, Type 2;DNA:SNP:promoter:-374T>A (human) associated with Diabetes Mellitus, Type 1;DNA:SNP:promoter:-374T>A (human) protein:increased expression:retina inner nuclear layer, retinal ganglion cell (rat) associated with Diabetes Mellitus, Type 2;DNA:polymorphisms:promoter, cds, intron:g.-443T>C, p.G82S, g.1704G>T (rs1800625, rs2070600, rs184003) (human) associated with Diabetes Mellitus, Type 2;DNA:missense mutation, snp, haplotype:cds, intron:p.G82S, g.1704G>T (human) associated with Diabetes Mellitus, Type 2;protein:increased expression:serum
GAD RGD
PMID:15118671 PMID:22427038 PMID:22171162 PMID:22116960 PMID:11375354 PMID:14704946 PMID:16969646 PMID:16969646 PMID:23146804 PMID:23587252 PMID:22475522 PMID:19542745 PMID:23091285 More...
RGD:1331525 , RGD:8695983 , RGD:8695979 , RGD:8695967 , RGD:8695966 , RGD:8695965 , RGD:8695958 , RGD:8695958 , RGD:7244369 , RGD:7244248 , RGD:7244176 , RGD:7244175 , RGD:7244174
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
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Agt
angiotensinogen
treatment
ISO IMP
associated with Diabetes Mellitus, Type 1;DNA:polymorphism: :p.M235T (human) associated with Diabetes Mellitus, Experimental CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:15387897 PMID:10862638 PMID:21792177
RGD:8548872 , RGD:8548900
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
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Agtr1a
angiotensin II receptor, type 1a
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:16601577
NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
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Akr1b1
aldo-keto reductase family 1 member B1
susceptibility no_association
IDA ISO IEP
associated with Diabetes Mellitus, Experimental associated with Diabetes Mellitus;DNA:repeats, snp:promoter:multiple (human) associated with Diabetes Mellitus, Type 2;DNA:snp:promoter:g.-106C>T (human) associated with Diabetes Mellitus, Type 2;DNA:promoter:repeat:g.-2008(AC)n (rs35839483) (human) protein:increased expression:retinal astrocyte (rat)
RGD
PMID:17003340 PMID:19587357 PMID:16701918 PMID:21067572 PMID:8150024
RGD:1626080 , RGD:8548640 , RGD:8548668 , RGD:8548676 , RGD:8548684
NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157
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Akt1
AKT serine/threonine kinase 1
IEP
mRNA, protein:increased expression:retina
RGD
PMID:31759996
RGD:41410819
NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
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Ang
angiogenin
ISO
associated with Diabetes Mellitus, Type 2;protein:decreased tyrosine phosphorylation:vitreous humor
RGD
PMID:18978347
RGD:2307061
NCBI chr15:24,312,711...24,323,361
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Angpt1
angiopoietin 1
ISO
associated with Diabetes Mellitus, Experimental
RGD
PMID:12000720
RGD:2313818
NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
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Angpt2
angiopoietin 2
IEP IDA
protein:increased expression:retina (rat)
RGD
PMID:16520919 PMID:16520919
RGD:2314216 , RGD:2314216
NCBI chr16:71,088,364...71,138,805
Ensembl chr16:71,088,364...71,138,804
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Aoc3
amine oxidase, copper containing 3
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:increased expression:plasma
RGD
PMID:11522499
RGD:2313826
NCBI chr10:86,272,757...86,280,702
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Apoa4
apolipoprotein A4
ISO
protein:increased expression:vitreous humor (human)
RGD
PMID:19081814
RGD:5685692
NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
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Apob
apolipoprotein B
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent
RGD
PMID:19448981
RGD:2313976
NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
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Apoc3
apolipoprotein C3
severity
ISO
protein:increased expression:serum
RGD
PMID:15642486
RGD:2306768
NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583
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Apoe
apolipoprotein E
susceptibility no_association
ISO
associated with Diabetic Mellitus type 2;DNA:polymorphism:exon:
RGD
PMID:16862278 PMID:11495633
RGD:7771557 , RGD:7771553
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
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Apoh
apolipoprotein H
ISO
protein:increased expression:vitreous humor
RGD
PMID:18695102
RGD:2313982
NCBI chr10:93,342,435...93,356,334
Ensembl chr10:93,310,977...93,356,329
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Aqp4
aquaporin 4
IMP
RGD
PMID:22449442
RGD:8695996
NCBI chr18:6,507,903...6,524,558
Ensembl chr18:6,507,903...6,524,856
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Atg7
autophagy related 7
IEP ISO
associated with type 2 diabetes mellitus; protein:decreased, altered expression:retina associated with type 1 diabetes mellitus;protein:decreased, altered expression:retina
RGD
PMID:32272782 PMID:32272782
RGD:407571700 , RGD:407571700
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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Bdkrb1
bradykinin receptor B1
treatment
IEP
associated with Diabetes Mellitus, Experimental
RGD
PMID:18311190
RGD:2313334
NCBI chr 6:124,510,827...124,514,475
Ensembl chr 6:124,510,870...124,513,747
G
Bdnf
brain-derived neurotrophic factor
IEP
associated with Diabetes Mellitus, Experimental;protein:decreased expression:retina:
RGD
PMID:15331553
RGD:8655657
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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Becn1
beclin 1
IEP ISO
associated with type 2 diabetes mellitus; protein:decreased, altered expression:retina associated with type 1 diabetes mellitus;protein:decreased, altered expression:retina
RGD
PMID:32272782 PMID:32272782
RGD:407571700 , RGD:407571700
NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
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Casp3
caspase 3
IEP ISO
associated with Diabetes Mellitus, Experimental;protein:increased expresssion:retina associated with Diabetes Mellitus, Non-Insulin-Dependent CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:20654064 PMID:19187597 PMID:19013511
RGD:2311444 , RGD:2311448
NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
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Casp9
caspase 9
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:increased activation:retina
RGD
PMID:18369072
RGD:2311244
NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626
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Cat
catalase
IEP
protein:decreased expression:retina
RGD
PMID:21314438
RGD:5130875
NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478
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Ccl2
C-C motif chemokine ligand 2
IEP
associated with Diabetes Mellitus, Experimental;mRNA, protein:increased expression:retina (rat)
RGD
PMID:23010641
RGD:8548887
NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
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Ccl5
C-C motif chemokine ligand 5
severity
ISO
protein:increased expression:serum associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:decreased tyrosine phosphorylation:vitreous humor
RGD
PMID:16249511 PMID:18978347
RGD:2307104 , RGD:2307061
NCBI chr10:68,322,826...68,327,380
Ensembl chr10:68,322,829...68,327,377
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Ccn2
cellular communication network factor 2
IEP
associated with Diabetes Mellitus, Experimental; mRNA:increased expression:retina (rat)
RGD
PMID:19450451
RGD:2314507
NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
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Ccr5
C-C motif chemokine receptor 5
ISO
associated with Diabetes Mellitus, Experimental
RGD
PMID:22677420
RGD:8551828
NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
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Cd34
CD34 molecule
IEP
mRNA, protein:increased expression:retina
RGD
PMID:31759996
RGD:41410819
NCBI chr13:106,480,313...106,500,844
Ensembl chr13:106,480,043...106,499,832
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Cd59b
CD59b molecule
IEP
protein:decreased expression:retina
RGD
PMID:12453906
RGD:1600487
NCBI chr 3:90,459,085...90,477,571
Ensembl chr 3:90,459,162...90,478,847
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Cdkal1
CDK5 regulatory subunit associated protein 1-like 1
disease_progression
ISO
DNA:SNP:intron: (rs7756992) (human)
RGD
PMID:28821857
RGD:401850599
NCBI chr17:34,718,701...35,271,276
Ensembl chr17:34,718,687...35,407,524
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Cfb
complement factor B
no_association
ISO
associated with Diabetes Mellitus, Type 2;DNA:SNP: :rs1048709 (human) associated with Diabetes Mellitus, Type 2;DNA:SNP: :rs537160, rs4151657, rs2072633 (human)
RGD
PMID:23864767 PMID:23864767
RGD:7365019 , RGD:7365019
NCBI chr20:3,970,643...3,976,510
Ensembl chr20:3,951,474...3,976,505
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Cfh
complement factor H
ISO
associated with Diabetes Mellitus, Type 2; DNA:SNP: :rs800292(human) associated with Diabetes Mellitus, Type 1;DNA:SNP: :rs1410996(human)
RGD
PMID:23864767 PMID:23296223
RGD:7365019 , RGD:7365023
NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838
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Cldn1
claudin 1
treatment
IEP
RGD
PMID:25685822
RGD:11341734
NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
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Clu
clusterin
treatment
ISO
associated with Diabetes Mellitus, Experimental
RGD
PMID:19875648
RGD:9068395
NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
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Crp
C-reactive protein
ISO
protein:increased expression:serum: CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:20012460 PMID:20012460
RGD:8547537
NCBI chr13:85,135,384...85,175,178
Ensembl chr13:85,124,977...85,175,178
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Cxcl10
C-X-C motif chemokine ligand 10
ISO
RGD
PMID:17194635
RGD:2311361
NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
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Cxcl12
C-X-C motif chemokine ligand 12
severity
ISO
protein:increased expression:vitreous humor
RGD
PMID:15630447
RGD:2306559
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
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Cyba
cytochrome b-245 alpha chain
IEP
associated with Diabetes Mellitus, Experimental
RGD
PMID:19685553
RGD:2317854
NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721
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Dll4
delta like canonical Notch ligand 4
severity
ISO
mRNA,protein:increased expression:retina:
RGD
PMID:30787185 PMID:34362349
RGD:155663348 , RGD:155663356
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
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Edn1
endothelin 1
ISO IEP
associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:polymorphism:exon:p.K198N (human) associated with Diabetes Mellitus, Insulin-Dependent;protein:increased secretion:plasma mRNA:increased expression:retina (rat)
RGD
PMID:18806884 PMID:19293263 PMID:20628425
RGD:2313281 , RGD:2313279 , RGD:9068929
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
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Egfr
epidermal growth factor receptor
treatment
ISO
protein:increased expression:retina associated with Diabetes Mellitus, Experimental
RGD
PMID:7947554 PMID:23831329
RGD:1580957 , RGD:10059675
NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
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Eln
elastin
ISO
RGD
PMID:11707314
RGD:9585734
NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
G
Eng
endoglin
ISO
associated with Diabetes Mellitus, Insulin-Dependent; protein:increased expression:plasma,vitreous body
RGD
PMID:16202216
RGD:1580961
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Ep300
E1A binding protein p300
IMP
associated with Diabetes Mellitus, Experimental
RGD
PMID:21885871
RGD:7349382
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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Epo
erythropoietin
susceptibility
ISO
protein:increased expression:serum,vitreous body DNA:snp:promoter:-1125T>G(rs1617640)(human) associated with Diabetes Mellitus, Experimental
RGD
PMID:18670462 PMID:18458324 PMID:18235022 PMID:24508793
RGD:2313837 , RGD:2313838 , RGD:2313890 , RGD:10400906
NCBI chr12:19,204,258...19,207,948
Ensembl chr12:19,204,508...19,207,946
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F13a1
coagulation factor XIII A1 chain
ISO
protein:increased expression:optic choroid vascular plexus:
RGD
PMID:11375345
RGD:8693344
NCBI chr17:27,815,723...27,992,494
Ensembl chr17:27,815,702...27,992,700
G
F3
coagulation factor III, tissue factor
ISO
protein:increased expression:aqueous humor,serum
RGD
PMID:12417540
RGD:2313865
NCBI chr 2:209,827,061...209,838,666
Ensembl chr 2:209,826,959...209,838,668
G
F7
coagulation factor VII
ISO
associated with Diabetes Mellitus, Insulin-Dependent; protein:increased activity:plasma (human)
RGD
PMID:10837382
RGD:2312398
NCBI chr16:76,489,775...76,500,636
Ensembl chr16:76,489,717...76,500,610
G
Fgf2
fibroblast growth factor 2
ISO IEP
associated with Pregnancy in Diabetics associated with Diabetes Mellitus, Experimental DNA:polymorphism:promotor:g.-553T>A(human) DNA:polymorphism:intron:g.754C>G(human)
RGD
PMID:9141532 PMID:14975211 PMID:18279437 PMID:17997184
RGD:2315885 , RGD:2315875 , RGD:2315844 , RGD:2315845
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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Flt1
Fms related receptor tyrosine kinase 1
treatment
ISO IEP
RGD
PMID:17143550 PMID:18174522
RGD:2313721 , RGD:10402119
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
G
Fuca1
alpha-L-fucosidase 1
IEP
associated with Diabetes Mellitus, Experimental;protein:increased activity:retina
RGD
PMID:10353622
RGD:2315932
NCBI chr 5:148,152,718...148,169,972
Ensembl chr 5:148,152,700...148,169,972
G
Gad2
glutamate decarboxylase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21412422
NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155
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Gapdh
glyceraldehyde-3-phosphate dehydrogenase
IEP
associated with Diabetes Mellitus, Experimental
RGD
PMID:18852331
RGD:2315975
NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
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Gc
GC, vitamin D binding protein
ISO
protein:increased expression:vitreous body
RGD
PMID:16080911
RGD:2315548
NCBI chr14:18,632,146...18,667,563
Ensembl chr14:18,632,135...18,667,567
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Ggt1
gamma-glutamyltransferase 1
ISO
associated with Diabetes Mellitus,Insulin-Dependent;protein:increased activity:serum
RGD
PMID:11311965
RGD:2315614
NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
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Gh1
growth hormone 1
ISO
RGD
PMID:3183302
RGD:2315688
NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
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Glo1
glyoxalase 1
no_association
ISO
DNA:SNP:promoter:-7C>T (human)
RGD
PMID:21738003 PMID:21738003
RGD:7242569 , RGD:7242569
NCBI chr20:8,663,617...8,681,661
Ensembl chr20:8,662,801...8,681,649
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Glul
glutamate-ammonia ligase
treatment
IEP
associated with Experimental Diabetes Mellitus
RGD
PMID:34133251
RGD:401794594
NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108
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Gstm1
glutathione S-transferase mu 1
susceptibility
ISO
associated with Diabetes Mellitus, Type 1;DNA:deletion:cds (human)
RGD
PMID:19752172
RGD:7495818
NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411
G
Gstt1
glutathione S-transferase theta 1
disease_progression no_association
ISO
associated with Diabetes Mellitus, Type 2;DNA:deletion:cds (human) associated with Diabetes Mellitus, Type 1;DNA:deletion:cds (human)
RGD
PMID:15927971 PMID:19752172
RGD:2306630 , RGD:7495818
NCBI chr20:12,856,613...12,873,586
Ensembl chr20:12,856,669...12,873,585
G
Hes1
hes family bHLH transcription factor 1
ISO
mRNA:increased expression:retina:
RGD
PMID:30787185
RGD:155663348
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
ISO
mRNA:increased expression:retina:
RGD
PMID:30787185
RGD:155663348
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Hfe
homeostatic iron regulator
ISO
associated with Diabetes Mellitus, Type 2;DNA:missense mutation:cds:p.C282Y (human)
RGD
PMID:15347835
RGD:8694362
NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
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Hgf
hepatocyte growth factor
disease_progression
ISO
associated with Diabetes Mellitus, Insulin-Dependent;protein:increased expression:serum
RGD
PMID:18335393 PMID:15525877
RGD:2313565 , RGD:8548539
NCBI chr 4:18,673,736...18,745,582
Ensembl chr 4:18,677,101...18,745,409
G
Hif1a
hypoxia inducible factor 1 subunit alpha
severity treatment
ISO IDA IEP
protein:increased expression:retina, vascular endothelial cell (human) associated with Diabetes Mellitus, Experimental associated with Diabetes Mellitus, Experimental;protein:increased expression:retina (rat)
RGD
PMID:17229797 PMID:20515763 PMID:22110070
RGD:8694462 , RGD:8696025 , RGD:7364887
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hras
HRas proto-oncogene, GTPase
IDA
RGD
PMID:14988264
RGD:1358731
NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
G
Icam1
intercellular adhesion molecule 1
treatment
ISO IEP
associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:polymorphism: :p.K469E (human) CTD Direct Evidence: therapeutic
CTD RGD
PMID:10485912 PMID:18834676 PMID:18942221 PMID:25066112
RGD:2313472 , RGD:2313471 , RGD:11354984
NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
G
Igf1
insulin-like growth factor 1
susceptibility
ISO
protein:decreased expression:serum
RGD
PMID:16873705 PMID:17194636
RGD:1598424 , RGD:2313764
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Igf1r
insulin-like growth factor 1 receptor
disease_progression
IEP
mRNA:increased expression:retina:
RGD
PMID:12781065
RGD:10046008
NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
G
Il10
interleukin 10
susceptibility
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:decreased tyrosine phosphorylation:vitreous humor associated with Diabetes Mellitus, Type 2
RGD
PMID:18978347 PMID:16696964 PMID:18988929 PMID:22105495
RGD:2307061 , RGD:1598486 , RGD:2307272 , RGD:7364856
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
G
Il18
interleukin 18
ISO
associated with Diabetes Mellitus, Type 2;protein:increased expression:serum
RGD
PMID:19011009 PMID:16260350
RGD:4889417 , RGD:8655907
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Il1a
interleukin 1 alpha
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:decreased tyrosine phosphorylation:vitreous humor
RGD
PMID:18978347
RGD:2307061
NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
G
Il1b
interleukin 1 beta
ISO
associated with Diabetes Mellitus, Type 2; protein:decreased tyrosine phosphorylation:vitreous humor protein:increased expression:serum, vitreous humour
RGD
PMID:18978347 PMID:16284605
RGD:2307061 , RGD:7401212
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Il6
interleukin 6
susceptibility
ISO
associated with Diabetes Mellitus; DNA:polymorphism:promoter:-174G>C (human) associated with Diabetes Mellitus, Type1;DNA:polymorphism:promoter:-174G>C(human) associated with Diabetes Mellitus, Typpe 1;protein:increased expression:serum: associated with Diabetes Mellitus, Non-Insulin-Dependent; protein:increased expression:extracellular space (human)
RGD
PMID:19140096 PMID:19542902 PMID:17725274 PMID:18988929
RGD:2307267 , RGD:7829816 , RGD:7829749 , RGD:2307272
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Ins2
insulin 2
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:30463601 PMID:22046295
RGD:6902909
NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
G
Insr
insulin receptor
ISS
MouseDO
NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
G
Itga2
integrin subunit alpha 2
severity no_association susceptibility
ISO
associated with Diabetes Mellitus; DNA:transition:cds:807C>T (human) associated with Diabetes Mellitus, Type 2;DNA:snp:cds:c.807T>C (human) associated with Diabetes Mellitus, Type 2;DNA:snp:intron:IVS8-1059T>C (human) associated with Diabetes Mellitus, Type 2;DNA:snp:intron:IVS7+3160A>G (human)
RGD
PMID:12540964 PMID:21632096 PMID:18806884 PMID:23776381
RGD:2307419 , RGD:8686431 , RGD:2313281 , RGD:7777103
NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
G
Itga4
integrin subunit alpha 4
treatment
IMP
associated with Diabetes Mellitus, Experimental
RGD
PMID:19553613
RGD:9698417
NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
G
Itgam
integrin subunit alpha M
IEP
mRNA, protein:increased expression:retina (rat)
RGD
PMID:33614447
RGD:329901937
NCBI chr 1:182,659,047...182,709,501
Ensembl chr 1:182,659,000...182,709,503
G
Itgb3
integrin subunit beta 3
ISO
protein:increased expression:optic choroid vascular plexus:
RGD
PMID:11375345
RGD:8693344
NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
G
Jag1
jagged canonical Notch ligand 1
ISO
mRNA,protein:increased expression:retina:
RGD
PMID:30787185
RGD:155663348
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Kcnj10
potassium inwardly-rectifying channel, subfamily J, member 10
treatment
IDA IEP
associated with Diabetes Mellitus, Experimental
RGD
PMID:21672350 PMID:22143324
RGD:8662869 , RGD:8662907
NCBI chr13:84,802,026...84,835,383
Ensembl chr13:84,802,009...84,835,461
G
Kdm1a
lysine demethylase 1A
IEP ISO
mRNA, protein:increased expression:retina (rat) mRNA:increased expression:retina (human)
RGD
PMID:23423566 PMID:23423566 PMID:23423566
RGD:8547881 , RGD:8547881 , RGD:8547881
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Keap1
Kelch-like ECH-associated protein 1
IEP
associated with Diabetes Mellitus, Experimental;mRNA, protein:increased expression:retina
RGD
PMID:23633659
RGD:10412733
NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862
G
Lta
lymphotoxin alpha
no_association susceptibility
ISO
associated with Diabetes Mellitus, Type 2;DNA:polymorphism:intron, exon:252A>G, 804C>A (human)
RGD
PMID:16979413 PMID:11399938
RGD:8548772 , RGD:8548797
NCBI chr20:3,618,853...3,621,324
Ensembl chr20:3,618,853...3,620,859
G
Mesp1
mesoderm posterior bHLH transcription factor 1
ISO
associated with type 2 diabetes mellitus;DNA:increased expression:plasma (human)
RGD
PMID:33221518
RGD:242905212
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
G
Mfn2
mitofusin 2
IEP
associated with Diabetes Mellitus, Experimental;mRNA, protein:decreased expression:retina (rat)
RGD
PMID:28487236
RGD:12910715
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Mir126b
microRNA 126b
ameliorates
IEP IDA
RNA:decreased expression:serum,retina
RGD
PMID:33416109 PMID:33416109
RGD:401850543 , RGD:401850543
NCBI chr 3:9,415,087...9,415,159
G
Mir17
microRNA 17
treatment
ISO
RGD
PMID:33333415
RGD:329349303
NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
G
Mir21
microRNA 21
IEP
RNA:increased expression:retina
RGD
PMID:31759996
RGD:41410819
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir320a
microRNA 320a
ISO
miRNA:decreased expression:blood plasma (human)
RGD
PMID:32178730
RGD:155882566
NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473
G
Mmp2
matrix metallopeptidase 2
ISO
protein:increased expression:plasma
RGD
PMID:12714657 PMID:18552985
RGD:1582582 , RGD:8547849
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
G
Mmp9
matrix metallopeptidase 9
disease_progression
ISO
associated with Diabetes Mellitus, Experimental associated with Diabetes Mellitus, Type 2
RGD
PMID:16643893 PMID:21933988 PMID:10374894
RGD:1582616 , RGD:8547857 , RGD:8547815
NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
G
Mthfr
methylenetetrahydrofolate reductase
susceptibility
ISO
associated with Diabetes Mellitus, Type 2; DNA:transition:cds:g.677C>T (human)
RGD
PMID:9040583
RGD:6893525
NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797
G
Mysm1
myb-like, SWIRM and MPN domains 1
susceptibility
ISO
associated with Diabetes Mellitus, Type 2;DNA:snps:introns: IVS1-1269C>T, IVS6+1700G>A (rs2811893, rs12092121) (human)
RGD
PMID:21310492
RGD:9589162
NCBI chr 5:109,761,345...109,826,652
Ensembl chr 5:109,776,286...109,819,967
G
Nfe2l2
NFE2 like bZIP transcription factor 2
IDA
associated with Diabetes Mellitus, Experimental;protein:decreased activity:retina
RGD
PMID:23633659
RGD:10412733
NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737
G
Ngf
nerve growth factor
ISO IMP
protein:increased expression:serum associated with Experimental Diabetes Mellitus
RGD
PMID:18282491 PMID:24030532
RGD:7242804 , RGD:405100241
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Nos1
nitric oxide synthase 1
IEP
mRNA, protein:decreased expression:retina
RGD
PMID:17545029
RGD:1642141
NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
G
Nos3
nitric oxide synthase 3
no_association susceptibility treatment severity onset
ISO IDA IEP
associated with Diabetes Mellitus, Type 2;DNA:duplication:intron:IVS4?-?+27 (human) associated with Diabetes Mellitus, Type 2;DNA:snp:exon:c.894G>T (human) associated with Diabetes Mellitus, Type 2;DNA:snps, duplication, haplotype:promoter, cds, intron:g.-786T>C, p.E298N, IVS4?-?+27 (human) associated with Diabetes Mellitus, Experimental associated with Diabetes Mellitus, Experimental;mRNA:decreased expression:retina (rat) DNA:snps:promoter, exon:c.-786T>C, c.774C>T (human) associated with Diabetes Mellitus, Type 1;DNA:duplication:intron:IVS4?-?+27 (human)
RGD
PMID:16581274 PMID:23776381 PMID:22017289 PMID:17558849 PMID:18840783 PMID:23059402 PMID:20435587 PMID:15890549 PMID:17973941 PMID:11918626 More...
RGD:7421531 , RGD:7777103 , RGD:7777101 , RGD:7775042 , RGD:7771606 , RGD:7771569 , RGD:7771568 , RGD:7771565 , RGD:7421533 , RGD:7421532
NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
G
Notch1
notch receptor 1
treatment
ISO
RGD
PMID:30787185
RGD:155663348
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Nppa
natriuretic peptide A
ISO
protein:increased expression:vitreous humor
RGD
PMID:15273657
RGD:2313589
NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351
G
Npr3
natriuretic peptide receptor 3
IEP
mRNA:decreased expression:retina (rat)
RGD
PMID:15789000
RGD:1580773
NCBI chr 2:60,865,483...60,933,432
Ensembl chr 2:60,870,594...60,932,955
G
Nr3c1
nuclear receptor subfamily 3, group C, member 1
IEP
associated with Experimental Diabetes Mellitus;protein:altered expression:retina
RGD
PMID:37904673
RGD:408364965
NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
G
Nrp1
neuropilin 1
treatment
ISO
RGD
PMID:26554379
RGD:401901170
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nutf2
nuclear transport factor 2
treatment
ISO IDA
mRNA:decreased expression:peripheral blood:
RGD
PMID:19404486 PMID:19404486
RGD:9831377 , RGD:9831377
NCBI chr19:33,752,319...33,773,595
Ensembl chr19:33,752,291...33,773,591
G
Ocln
occludin
treatment
IEP
RGD
PMID:25685822
RGD:11341734
NCBI chr 2:31,657,217...31,707,466
Ensembl chr 2:31,657,220...31,764,150
G
Pf4
platelet factor 4
IEP
protein:increased expression:retina
RGD
PMID:23352833
RGD:329901846
NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
G
Pgf
placental growth factor
IEP
associated with Diabetes Mellitus, Type 2
RGD
PMID:21408222
RGD:6483775
NCBI chr 6:104,816,102...104,826,685
Ensembl chr 6:104,816,104...104,826,685
G
Pik3cg
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
IEP
mRNA, protein:increased expression:retina
RGD
PMID:31759996
RGD:41410819
NCBI chr 6:48,766,778...48,802,098
Ensembl chr 6:48,766,864...48,802,043
G
Plk4
polo-like kinase 4
treatment
IEP
RGD
PMID:33416109
RGD:401850543
NCBI chr 2:123,802,527...123,820,942
Ensembl chr 2:123,802,512...123,820,942
G
Pon1
paraoxonase 1
susceptibility
ISO
DNA:polymorphism:promoter:g.-907C>G (human) CTD Direct Evidence: marker/mechanism associated with Diabetes Mellitus;DNA:missense mutation:cds:p.L55M (rs854560) (human) associated with Diabetes Mellitus, Type 2;DNA:missense mutation:cds:p.Q192R (human) associated with Diabetes Mellitus, Type 1;protein:decreased activity:serum (human)
CTD RGD
PMID:9661650 PMID:20012460 PMID:16949520 PMID:24100645 PMID:15270786 PMID:20012460 More...
RGD:2313272 , RGD:8547572 , RGD:8547548 , RGD:8547537
NCBI chr 4:33,294,737...33,325,759
Ensembl chr 4:33,294,722...33,321,360
G
Pparg
peroxisome proliferator-activated receptor gamma
ISO
Retinal Leukostasis;associated with Diabetes Mellitus, Experimental
RGD
PMID:17003451
RGD:8552824
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
G
Ppargc1a
PPARG coactivator 1 alpha
IDA IEP
associated with Diabetes Mellitus, Experimental; mRNA:increased expression:retina (rat)
RGD
PMID:20566666 PMID:22003111
RGD:6484532 , RGD:5686899
NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
G
Pten
phosphatase and tensin homolog
IEP
mRNA, protein:decreased expression:retina
RGD
PMID:31759996
RGD:41410819
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Rbp4
retinol binding protein 4
severity
ISO
protein:increased expression:blood plasma (human)
RGD
PMID:30135138
RGD:329849110
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
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Retn
resistin
ISO
associated with Diabetes Mellitus, Type 2
RGD
PMID:17303077
RGD:7207162
NCBI chr12:1,710,881...1,712,621
Ensembl chr12:1,710,881...1,712,620
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Robo1
roundabout guidance receptor 1
IEP
mRNA,protein:increased expression:retina
RGD
PMID:28973045
RGD:243048421
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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RT1-Bb
RT1 class II, locus Bb
susceptibility severity
ISO
associated with Diabetes Mellitus, Type 1;DNA:polymorphisms, haplotypes:cds:HLA-DQB1*0201, HLA-DQB1*0501, HLA-DQB1*0504 (human) DNA:polymorphisms, haplotype:cds:HLA-DQB1*0201, HLA-DQB1*0302 (human)
RGD
PMID:19551681 PMID:8932997
RGD:7421552 , RGD:7483573
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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RT1-CE13
RT1 class I, locus CE13
susceptibility
ISO
associated with Diabetes Mellitus, Type 1; DNA:polymorphisms:cds:HLA-B*49 (human)
RGD
PMID:22981956
RGD:7365095
NCBI chr20:3,314,830...3,318,106
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RT1-Db1
RT1 class II, locus Db1
susceptibility
ISO
associated with Diabetes Mellitus Type 1;DNA:polymorphism::DRB1*0301,DRB1*0402(human)
RGD
PMID:23837223
RGD:7365113
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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Serpina4
serpin family A member 4
ISO
protein:decreased expression:vitreous fluid (human)
RGD
PMID:8950506
RGD:1580289
NCBI chr 6:122,999,970...123,009,083
Ensembl chr 6:122,999,900...123,009,082
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Serpine1
serpin family E member 1
susceptibility no_association
ISO
associated with Diabetes Mellitus, Type 2;DNA:deletion:promoter:g.-676_-674delG (human) associated with Diabetes Mellitus, Type 2;DNA:snp, deletion:promoter:g.-844G>A, g.-676_-674delG (human) associated with Diabetes Mellitus;repeat, snp:intron, 3' utr:g.7844(CA)1-6, ? (human) associated with Diabetes Mellitus, Type 1;protein:increased expression:plasma (human)
RGD
PMID:23281898 PMID:19419896 PMID:7974340 PMID:9201602 PMID:12660488
RGD:8547697 , RGD:8547741 , RGD:8547740 , RGD:8547710 , RGD:8547699
NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
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Serpinf1
serpin family F member 1
severity
ISO IEP
associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:SNPs:promoter:g.-5740T>C, g.-5308G>A (rs12150053, rs12948385) (human) protein:increased expression:vitreous humor associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:increased expression:vitreous humor associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:increased expression:retina associated with Diabetes Mellitus, Insulin-Dependent;protein:increased expression:serum protein:alternative form:vitreous humor
RGD
PMID:17658465 PMID:15059706 PMID:18025835 PMID:16054135 PMID:18455830 PMID:19365032 More...
RGD:2312346 , RGD:1580135 , RGD:2312344 , RGD:2312348 , RGD:2312341 , RGD:2312337
NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
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Sgf29
SAGA complex associated factor 29
severity
ISO
associated with Diabetes Mellitus, Type 1; DNA:SNP:intron: rs10521145(human)
RGD
PMID:21441570
RGD:9587455
NCBI chr 1:181,238,458...181,271,931
Ensembl chr 1:181,238,468...181,274,781
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Sirt1
sirtuin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:24894401
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
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Slit2
slit guidance ligand 2
IEP
mRNA,protein:increased expression:retina
RGD
PMID:28973045
RGD:243048421
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Sod1
superoxide dismutase 1
ISO
human gene in a mouse model CTD Direct Evidence: therapeutic
CTD RGD
PMID:19074809 PMID:19074809
RGD:8655572
NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
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Sod3
superoxide dismutase 3
ISO
RGD
PMID:12663605
RGD:1581298
NCBI chr14:58,610,104...58,615,845
Ensembl chr14:58,609,958...58,615,990
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Stra6
signaling receptor and transporter of retinol STRA6
treatment
ISO
associated with type 2 diabetes mellitus
RGD
PMID:30096827
RGD:155631301
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
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Tgfbr2
transforming growth factor, beta receptor 2
ISO
ClinVar Annotator: match by term: Diabetic retinopathy
ClinVar
PMID:9536098 PMID:15731757 PMID:16799921 PMID:17576681 PMID:21270064 PMID:24033266 PMID:25741868 PMID:25944730 PMID:28162229 PMID:28492532 PMID:28679693 PMID:29510914 PMID:30222965 PMID:32528524 PMID:34572573 More...
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
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Thbs1
thrombospondin 1
IEP ISO
associated with Diabetes Mellitus, Experimental CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:17117553 PMID:17117553
RGD:2317943
NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
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Timm44
translocase of inner mitochondrial membrane 44
IEP
associated with Diabetes Mellitus, Experimental;mRNA:decreased expression:retina
RGD
PMID:22003103
RGD:13463597
NCBI chr12:2,612,581...2,629,374
Ensembl chr12:2,612,581...2,629,351
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Tlr4
toll-like receptor 4
onset
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:polymorphism: :p.N299G (human)
RGD
PMID:19135114
RGD:2312487
NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
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Tnf
tumor necrosis factor
no_association disease_progression
ISO
associated with Diabetes Mellitus, Type 2 associated with Diabetes Mellitus, Type 2;DNA:polymorphism:promoter:-302A>G (human) protein:increased expression:serum, vitreous humour associated with Diabetes Mellitus, Type 1;protein:increased expression:platelet:
RGD
PMID:22105495 PMID:16979413 PMID:16284605 PMID:10540181
RGD:7364856 , RGD:8548772 , RGD:7401212 , RGD:7394805
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Uts2
urotensin 2
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:increased expression:plasma
RGD
PMID:18338983
RGD:2306795
NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
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Vcam1
vascular cell adhesion molecule 1
ISO
associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:increased expression:vitreous humor, serum
RGD
PMID:19237221
RGD:2312762
NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
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Vdr
vitamin D receptor
ISO
RGD
PMID:15899948
RGD:1580363
NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
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Vegfa
vascular endothelial growth factor A
ISO IEP
mRNA, protein:increased expression:retina CTD Direct Evidence: marker/mechanism associated with Diabetes Mellitus, type 2; protein:increased expression:aqueous humor of eyeball:
CTD RGD
PMID:11978667 PMID:15788408 PMID:20577866 PMID:17513698 PMID:31759996 PMID:9852717 PMID:16636650 More...
RGD:2301992 , RGD:41410819 , RGD:8547996 , RGD:1580565
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Vps26a
VPS26 retromer complex component A
susceptibility
ISO
DNA:SNP:: (rs1802295) (Human)
RGD
PMID:28821857
RGD:401850599
NCBI chr20:30,404,320...30,434,266
Ensembl chr20:30,404,325...30,434,131
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Vtn
vitronectin
ISO IEP
associated with Diabetes Mellitus, Experimental
RGD
PMID:7536680 PMID:8804356
RGD:1580818 , RGD:10040982
NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
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Vwf
von Willebrand factor
ISO
RGD
PMID:10077454
RGD:1580648
NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539
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Wfs1
wolframin ER transmembrane glycoprotein
susceptibility
ISO
DNA:SNP:: (rs10010131) (Human)
RGD
PMID:28821857
RGD:401850599
NCBI chr14:73,810,478...73,834,993
Ensembl chr14:73,810,404...73,835,602
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Xrcc1
X-ray repair cross complementing 1
susceptibility
ISO
DNA:SNP:cd: p.R399Q G>A (rs25487) (human)
RGD
PMID:30472145
RGD:401827275
NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701
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Il10
interleukin 10
ISO
DNA:SNP, haplotype:promoter
RGD
PMID:20720222
RGD:7364860
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
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Il1b
interleukin 1 beta
ISO
RGD
PMID:19585364
RGD:7401211
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
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Il6
interleukin 6
susceptibility
ISO
protein:increased expression:serum: DNA:polymorphism:promoter:-174G>C(human)
RGD
PMID:22025890 PMID:22025890
RGD:7829790 , RGD:7829790
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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RT1-CE13
RT1 class I, locus CE13
ISO
DNA:polymorphisms, haplotypes:cds:HLA-B12, HLA-B44 (human)
RGD
PMID:9756436
RGD:7365108
NCBI chr20:3,314,830...3,318,106
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Tnf
tumor necrosis factor
severity disease_progression
ISO
DNA:SNP, haplotype:promoter protein:increased expression:serum: protein:increased expression:vitreous fluid:
RGD
PMID:20720222 PMID:21139707 PMID:21394064 PMID:21849807 PMID:19585364
RGD:7364860 , RGD:7387277 , RGD:7387275 , RGD:7394772 , RGD:7401211
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Abca4
ATP binding cassette subfamily A member 4
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29207047
NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069
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Cdh5
cadherin 5
ISS
MouseDO
NCBI chr19:815,415...854,478
Ensembl chr19:815,411...854,368
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Ctnnb1
catenin beta 1
ISS
MouseDO
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Fzd4
frizzled class receptor 4
ISS ISO
OMIM:133780 | OMIM:305390 | OMIM:601813 | OMIM:605750 | OMIM:613310 ClinVar Annotator: match by term: Familial exudative vitreoretinopathy
MouseDO ClinVar
PMID:14507768 PMID:15035989 PMID:17955262 PMID:20340138 PMID:20938005 PMID:24033266 PMID:24744206 PMID:25711638 PMID:25741868 PMID:26908610 PMID:27316669 PMID:28492532 PMID:30452590 PMID:31294129 More...
NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
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Lrp5
LDL receptor related protein 5
ISO ISS
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Familial exudative vitreoretinopathy
CTD ClinVar MouseDO
PMID:8832721 PMID:11719191 PMID:15024691 PMID:16199547 PMID:16252235 PMID:24715757 PMID:25711638 PMID:28041643 PMID:28492532 PMID:29181528 PMID:29207047 PMID:30452590 PMID:31299183 PMID:31987760 PMID:33118644 More...
NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
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Ndp
norrin cystine knot growth factor NDP
ISS
OMIM:133780 | OMIM:305390 | OMIM:601813 | OMIM:605750 | OMIM:613310
MouseDO
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
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Prss23
serine protease 23
ISO
ClinVar Annotator: match by term: Familial exudative vitreoretinopathy
ClinVar
PMID:14507768 PMID:15035989 PMID:17955262 PMID:20340138 PMID:20938005 PMID:24033266 PMID:24744206 PMID:25711638 PMID:25741868 PMID:26908610 PMID:27316669 PMID:28492532 PMID:30452590 PMID:31294129 More...
NCBI chr 1:143,402,725...143,422,182
Ensembl chr 1:143,401,396...143,422,091
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Tspan12
tetraspanin 12
ISS ISO
OMIM:133780 | OMIM:305390 | OMIM:601813 | OMIM:605750 | OMIM:613310 ClinVar Annotator: match by term: Familial exudative vitreoretinopathy
MouseDO ClinVar
PMID:25250762 PMID:25741868 PMID:28041643 PMID:28492532
NCBI chr 4:50,313,768...50,389,246
Ensembl chr 4:50,313,772...50,389,246
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Znf408
zinc finger protein 408
ISO
ClinVar Annotator: match by term: Familial exudative vitreoretinopathy
ClinVar
NCBI chr 3:77,615,595...77,621,325
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Ccdc81
coiled-coil domain containing 81
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:143,739,472...143,791,026
Ensembl chr 1:143,739,474...143,790,926
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Ccdc83
coiled-coil domain containing 83
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:144,167,993...144,225,622
Ensembl chr 1:144,167,857...144,225,656
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Ccdc89
coiled-coil domain containing 89
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:144,386,252...144,387,514
Ensembl chr 1:144,386,158...144,389,850
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Crebzf
CREB/ATF bZIP transcription factor
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:144,416,864...144,423,540
Ensembl chr 1:144,417,446...144,428,553
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Ctnnb1
catenin beta 1
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1 | ClinVar Annotator: match by term: Familial exudative vitreoretinopathy, autosomal dominant
ClinVar
PMID:28492532 PMID:28575650 PMID:36083290
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Dlg2
discs large MAGUK scaffold protein 2
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:144,451,653...146,503,949
Ensembl chr 1:144,451,472...146,499,475
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Eed
embryonic ectoderm development
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974
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Fzd4
frizzled class receptor 4
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Exudative vitreoretinopathy 1 | ClinVar Annotator: match by term: Familial exudative vitreoretinopathy, autosomal dominant
CTD ClinVar OMIM RGD
PMID:12172548 PMID:14507768 PMID:15035989 PMID:15370539 PMID:15488808 PMID:15733276 PMID:15981244 PMID:17955262 PMID:19324841 PMID:20340138 PMID:20938005 PMID:21097938 PMID:21177847 PMID:21179236 PMID:21681106 PMID:24033266 PMID:24744206 PMID:25711638 PMID:25741868 PMID:26227961 PMID:26908610 PMID:27316669 PMID:28492532 PMID:30452590 PMID:31294129 PMID:12172548 More...
RGD:1598999
NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
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Hikeshi
heat shock protein nuclear import factor hikeshi
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:143,825,399...143,849,361
Ensembl chr 1:143,825,923...143,849,363
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Lrp5
LDL receptor related protein 5
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Exudative vitreoretinopathy 1 | ClinVar Annotator: match by term: Familial exudative vitreoretinopathy, autosomal dominant
CTD ClinVar
PMID:9536098 PMID:11719191 PMID:12579474 PMID:15024691 PMID:15077203 PMID:15201508 PMID:15619672 PMID:15767861 PMID:15777745 PMID:15824851 PMID:15824861 PMID:15850991 PMID:16199547 PMID:16234968 PMID:16252235 PMID:16679074 PMID:17137849 PMID:17202888 PMID:17223614 PMID:17306638 PMID:17307038 PMID:17576681 PMID:18058054 PMID:18349089 PMID:18588671 PMID:18602879 PMID:19324841 PMID:21528003 PMID:22456437 PMID:23441120 PMID:24423337 PMID:24706814 PMID:24715757 PMID:25711638 PMID:25741868 PMID:25920554 PMID:26467025 PMID:28192794 PMID:28378289 PMID:28420620 PMID:28492532 PMID:28494495 PMID:29168297 PMID:29181528 PMID:30283887 PMID:30452590 PMID:31039433 PMID:33118644 PMID:33302760 PMID:33939331 PMID:34639175 PMID:34860240 PMID:35106624 More...
NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
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Me3
malic enzyme 3
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:143,534,024...143,735,551
Ensembl chr 1:143,534,139...143,733,132
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Picalm
phosphatidylinositol binding clathrin assembly protein
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
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Prss23
serine protease 23
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1 | ClinVar Annotator: match by term: Familial exudative vitreoretinopathy, autosomal dominant
ClinVar
PMID:12172548 PMID:14507768 PMID:15035989 PMID:15488808 PMID:15733276 PMID:15981244 PMID:17955262 PMID:20340138 PMID:20938005 PMID:21097938 PMID:21681106 PMID:24033266 PMID:24744206 PMID:25711638 PMID:25741868 PMID:26908610 PMID:27316669 PMID:28492532 PMID:30452590 PMID:31294129 More...
NCBI chr 1:143,402,725...143,422,182
Ensembl chr 1:143,401,396...143,422,091
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Sytl2
synaptotagmin-like 2
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:144,272,870...144,379,310
Ensembl chr 1:144,273,360...144,379,222
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Tmem126a
transmembrane protein 126A
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:144,424,481...144,430,730
Ensembl chr 1:144,422,703...144,430,628
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Tmem126b
transmembrane protein 126B
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:144,437,142...144,451,508
Ensembl chr 1:144,437,145...144,451,435
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Tmem135
transmembrane protein 135
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:21097938 PMID:21681106
NCBI chr 1:143,006,343...143,279,824
Ensembl chr 1:143,006,344...143,221,171
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Znf408
zinc finger protein 408
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 1
ClinVar
PMID:23716654 PMID:27316669 PMID:28492532
NCBI chr 3:77,615,595...77,621,325
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Lrp5
LDL receptor related protein 5
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 4 | ClinVar Annotator: match by term: Exudative vitreoretinopathy 4, autosomal dominant | ClinVar Annotator: match by term: Exudative vitreoretinopathy 4, autosomal recessive | ClinVar Annotator: match by term: Exudative vitreoretinopathy 4, digenic CTD Direct Evidence: marker/mechanism
OMIM ClinVar CTD
PMID:8832721 PMID:9056564 PMID:9536098 PMID:9831343 PMID:11719191 PMID:12579474 PMID:14507768 PMID:15024691 PMID:15077203 PMID:15201508 PMID:15346351 PMID:15619672 PMID:15767861 PMID:15777745 PMID:15824851 PMID:15824861 PMID:15850991 PMID:15981244 PMID:16199547 PMID:16234968 PMID:16252235 PMID:16679074 PMID:17137849 PMID:17202888 PMID:17223614 PMID:17306638 PMID:17307038 PMID:17576681 PMID:17955262 PMID:18058054 PMID:18349089 PMID:18588671 PMID:18602879 PMID:19324841 PMID:19837032 PMID:20034086 PMID:20340138 PMID:21528003 PMID:22456437 PMID:23441120 PMID:24423337 PMID:24706814 PMID:24715757 PMID:25384351 PMID:25711638 PMID:25741868 PMID:25920554 PMID:26244290 PMID:26467025 PMID:28041643 PMID:28192794 PMID:28378289 PMID:28420620 PMID:28492532 PMID:28494495 PMID:29168297 PMID:29181528 PMID:30283887 PMID:30452590 PMID:30894705 PMID:31039433 PMID:31077665 PMID:31237656 PMID:33118644 PMID:33939331 PMID:34639175 PMID:34860240 PMID:35106624 PMID:35754085 More...
NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
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Tspan12
tetraspanin 12
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 5 | ClinVar Annotator: match by term: TSPAN12-related condition CTD Direct Evidence: marker/mechanism
OMIM ClinVar CTD
PMID:15665352 PMID:20159111 PMID:20159112 PMID:21334594 PMID:21552475 PMID:22427576 PMID:25250762 PMID:25352738 PMID:25741868 PMID:28002565 PMID:28041643 PMID:28492532 PMID:28494495 PMID:31106028 PMID:31987760 PMID:34738848 More...
NCBI chr 4:50,313,768...50,389,246
Ensembl chr 4:50,313,772...50,389,246
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Znf408
zinc finger protein 408
ISO
ClinVar Annotator: match by term: Exudative vitreoretinopathy 6
OMIM ClinVar
PMID:6897033 PMID:23716654 PMID:25741868 PMID:25882705 PMID:28492532 PMID:29982478 PMID:33247286 More...
NCBI chr 3:77,615,595...77,621,325
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Ctnnb1
catenin beta 1
ISO
ClinVar Annotator: match by term: EXUDATIVE VITREORETINOPATHY 7 | ClinVar Annotator: match by term: Exudative vitreoretinopathy 7
OMIM ClinVar
PMID:23033978 PMID:24614104 PMID:25326635 PMID:25326669 PMID:25741868 PMID:26350204 PMID:27915094 PMID:27959697 PMID:28333917 PMID:28492532 PMID:28575650 PMID:31526516 PMID:36083290 More...
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Crb1
crumbs cell polarity complex component 1
IAGP
RGD
PMID:25878282
RGD:13451131
NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
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Crb1m1
crumbs 1, cell polarity complex component, mutant 1
IAGP
RGD
PMID:25878282
RGD:13451131
G
Adipoq
adiponectin, C1Q and collagen domain containing
ISO
associated with Diabetes Mellitus, Type 2;protein:increased expression:aqueous humor
RGD
PMID:22563689
RGD:8694466
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
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Ager
advanced glycosylation end product-specific receptor
ISO
protein:increased expression:vitreous humor
RGD
PMID:16364297
RGD:8695978
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
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Bcor
BCL6 co-repressor
susceptibility
ISO
associated with type 1 diabetes mellitus;DNA:hypomethylation:5'UTR
RGD
PMID:26248552
RGD:155631276
NCBI chr X:10,609,756...10,729,613
Ensembl chr X:10,687,732...10,729,613
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Cald1
caldesmon 1
ISO
mRNA:increased expression:retina (human)
RGD
PMID:35692390
RGD:401851065
NCBI chr 4:63,265,781...63,446,938
Ensembl chr 4:63,265,942...63,446,932
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Calu
calumenin
ISO
mRNA:increased expression:retina (human)
RGD
PMID:35692390
RGD:401851065
NCBI chr 4:57,949,086...57,976,589
Ensembl chr 4:57,948,997...57,976,593
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Cat
catalase
ISO
associated withDiabetes Mellitus, Type 2; mRNA,protein:decreased expression, decreased activity:blood,l serum:
RGD
PMID:24092995
RGD:9068931
NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478
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Ccl2
C-C motif chemokine ligand 2
disease_progression
ISO
associated with Diabetes Mellitus, Type 2;DNA:polymorphism:promoter:g.-2518A>G (human) associated with Diabetes Mellitus;protein:increased expression:vitreous humor (human)
RGD
PMID:23549806 PMID:21850157
RGD:8548851 , RGD:8549477
NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
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Ccn1
cellular communication network factor 1
ISO
protein:increased expression:vitreous body (human)
RGD
PMID:22160564
RGD:329845551
NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
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Col5a2
collagen type V alpha 2 chain
ISO
mRNA:increased expression:retina (human)
RGD
PMID:35692390
RGD:401851065
NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154
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Col6a3
collagen type VI alpha 3 chain
ISO
mRNA:increased expression:retina (human)
RGD
PMID:35692390
RGD:401851065
NCBI chr 9:91,361,578...91,439,434
Ensembl chr 9:91,361,583...91,439,471
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Coro1c
coronin 1C
ISO
mRNA:increased expression:retina (human)
RGD
PMID:35692390
RGD:401851065
NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
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Enpp2
ectonucleotide pyrophosphatase/phosphodiesterase 2
disease_progression
ISO
protein:decreased expression:vitreous:
RGD
PMID:22864860
RGD:9685437
NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
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Flt1
Fms related receptor tyrosine kinase 1
ISO
protein:increased expression:vitreous:
RGD
PMID:22868384
RGD:10402118
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
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Il6r
interleukin 6 receptor
ISO
protein:increased expression:serum
RGD
PMID:17401618
RGD:10402814
NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
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Map3k8
mitogen-activated protein kinase kinase kinase 8
ISO
protein:increased activity:serum:
RGD
PMID:28724746
RGD:151356966
NCBI chr17:53,382,908...53,403,216
Ensembl chr17:53,383,131...53,403,216
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Mir23a
microRNA 23a
ISO
miRNA:increased expression:blood serum (human)
RGD
PMID:24970617
RGD:155882576
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
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Mir29a
microRNA 29a
ISO
miRNA:increased expression:vitreous humor (human)
RGD
PMID:24970617
RGD:155882576
NCBI chr 4:59,650,608...59,650,695
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Mir320a
microRNA 320a
ISO
miRNA:increased expression:blood serum, vitreous humor (human)
RGD
PMID:24970617
RGD:155882576
NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473
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Mir423
microRNA 423
ISO
miRNA:decreased expression:serum
RGD
PMID:31422516
RGD:158014897
NCBI chr10:61,914,142...61,914,220
Ensembl chr10:61,914,133...61,914,226
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Mir93
microRNA 93
ISO
miRNA:increased expression:vitreous humor (human)
RGD
PMID:24970617
RGD:155882576
NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221
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Pdgfb
platelet derived growth factor subunit B
ISO
protein:increased expression:vitreous:
RGD
PMID:19799585
RGD:10449447
NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
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Pparg
peroxisome proliferator-activated receptor gamma
onset susceptibility
ISO
associated with Diabetes Mellitus, Type 2;DNA:snp:promoter:c.-2819A>G (human) DNA:snp:cds:p.P12A (rs1801282) (human)
RGD
PMID:18541841 PMID:19125195 PMID:23559865
RGD:2301854 , RGD:8699508 , RGD:8552820
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
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Ptpn1
protein tyrosine phosphatase, non-receptor type 1
ISO
protein:increased expression:vitreous humor (human)
RGD
PMID:33627831
RGD:401976389
NCBI chr 3:156,638,811...156,687,503
Ensembl chr 3:156,638,769...156,687,504
G
Rbp4
retinol binding protein 4
disease_progression
ISO
protein:increased expression:blood serum (human)
RGD
PMID:20233518
RGD:329853306
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
G
Serpine1
serpin family E member 1
susceptibility disease_progression
ISO
associated with Diabetes Mellitus, Type 2;DNA:deletion:promoter:g.-676_-674delG (human) protein:increased expression:plasma (human)
RGD
PMID:16416371 PMID:23304115
RGD:8699494 , RGD:8699497
NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
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Serpinf1
serpin family F member 1
treatment
ISO
protein:increased expression:vitreous fluid (human)
RGD
PMID:11723044 PMID:15059706
RGD:8554895 , RGD:1580135
NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
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Slit2
slit guidance ligand 2
ISO
associated with eye disease; protein:increased expression:vitreous
RGD
PMID:28973045
RGD:243048421
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Srsf6
serine and arginine rich splicing factor 6
ISO
DNA:snp:exon:p.P281P (rs2235611) (human)
RGD
PMID:21309690
RGD:11039452
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
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Timm44
translocase of inner mitochondrial membrane 44
ISO
mRNA:decreased expression:retina
RGD
PMID:22003103
RGD:13463597
NCBI chr12:2,612,581...2,629,374
Ensembl chr12:2,612,581...2,629,351
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Vegfa
vascular endothelial growth factor A
IDA
associated with Diabetes Mellitus, Type 2; protein:increased expression:retina
RGD
PMID:16054135
RGD:2312348
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Igfbp7
insulin-like growth factor binding protein 7
ISO
ClinVar Annotator: match by term: Retinal arterial macroaneurysm with supravalvular pulmonic stenosis | ClinVar Annotator: match by term: Retinal arterial macroaneurysm with supravascular pulmonic stenosis
OMIM ClinVar
PMID:12441727 PMID:21835307 PMID:25741868
NCBI chr14:30,737,414...30,797,317
Ensembl chr14:30,737,164...30,797,314
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F5
coagulation factor V
no_association
ISO
RGD
PMID:12928685
RGD:1580362
NCBI chr13:76,513,509...76,583,106
Ensembl chr13:76,513,255...76,582,317
G
Il10
interleukin 10
susceptibility
ISO
DNA:SNP:promoter:-592C>A (rs1800872) (human)
RGD
PMID:17438520
RGD:7365056
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
G
Il6
interleukin 6
susceptibility
ISO
DNA:polymorphism>promoter:-174G>C(human)
RGD
PMID:15604420 PMID:19421412
RGD:7829798 , RGD:7829809
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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Tnf
tumor necrosis factor
ISO
RGD
PMID:19421412
RGD:7829809
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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H19
H19 imprinted maternally expressed transcript
ameliorates
ISO
RGD
PMID:31127201
RGD:242905201
NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134
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Hif1a
hypoxia inducible factor 1 subunit alpha
treatment
IEP
RGD
PMID:23537149
RGD:10755711
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hmox1
heme oxygenase 1
treatment
IEP
RGD
PMID:23537149
RGD:10755711
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
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Mmp9
matrix metallopeptidase 9
treatment
IEP
RGD
PMID:23537149
RGD:10755711
NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
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Ngb
neuroglobin
IEP
associated with Ocular Hypertension;protein:increased expression:retina
RGD
PMID:22553688
RGD:9854634
NCBI chr 6:106,744,378...106,749,830
Ensembl chr 6:106,744,378...106,749,830
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Ptger4
prostaglandin E receptor 4
IEP
protein:decreased expression:retina (rat)
RGD
PMID:12821538
RGD:9850261
NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
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Thy1
Thy-1 cell surface antigen
treatment
IEP
RGD
PMID:23537149
RGD:10755711
NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
G
Vegfa
vascular endothelial growth factor A
treatment
IEP
RGD
PMID:23537149
RGD:10755711
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Crb1
crumbs cell polarity complex component 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:11389483
NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
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Ctc1
CST telomere replication complex component 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:22267198
NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298
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Fzd4
frizzled class receptor 4
ISO
ClinVar Annotator: match by term: Retinal telangiectasis
ClinVar
PMID:14507768 PMID:15035989 PMID:17955262 PMID:20340138 PMID:20938005 PMID:24033266 PMID:24744206 PMID:25711638 PMID:25741868 PMID:26908610 PMID:27316669 PMID:28492532 PMID:30452590 PMID:31294129 More...
NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
G
Kdr
kinase insert domain receptor
ISO
protein:increased expression,increased phosphorylation:eye:
RGD
PMID:23221067
RGD:8549759
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Prss23
serine protease 23
ISO
ClinVar Annotator: match by term: Retinal telangiectasis
ClinVar
PMID:14507768 PMID:15035989 PMID:17955262 PMID:20340138 PMID:20938005 PMID:24033266 PMID:24744206 PMID:25711638 PMID:25741868 PMID:26908610 PMID:27316669 PMID:28492532 PMID:30452590 PMID:31294129 More...
NCBI chr 1:143,402,725...143,422,182
Ensembl chr 1:143,401,396...143,422,091
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Rcbtb1
RCC1 and BTB domain containing protein 1
ISO
ClinVar Annotator: match by term: Retinal telangiectasis
ClinVar
PMID:25741868 PMID:26908610 PMID:28492532 PMID:31494449
NCBI chr15:33,319,586...33,362,421
Ensembl chr15:33,319,586...33,365,302
G
Vegfa
vascular endothelial growth factor A
severity
ISO
protein:increased expression:eye:
RGD
PMID:23221067
RGD:8549759
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Agt
angiotensinogen
ISO
RGD
PMID:19834028
RGD:11039401
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
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Cx3cr1
C-X3-C motif chemokine receptor 1
ISO
DNA:missense mutations, haplotypes:cds:p.V249I, p.T280M (human)
RGD
PMID:16799040
RGD:9491394
NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
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Il6
interleukin 6
ISO
RGD
PMID:19834028
RGD:11039401
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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RT1-CE13
RT1 class I, locus CE13
ISO
associated with Behcet Syndrome; DNA:polymorphisms:cds HLA B-5 (human)
RGD
PMID:12608042
RGD:7364920
NCBI chr20:3,314,830...3,318,106
G
Aqp1
aquaporin 1
IEP
RGD
PMID:21487926
RGD:5490120
NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
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Aqp4
aquaporin 4
IEP
mRNA:decreased expression:retina
RGD
PMID:21487926
RGD:5490120
NCBI chr18:6,507,903...6,524,558
Ensembl chr18:6,507,903...6,524,856
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Crp
C-reactive protein
ISO
protein:increased expression:serum:
RGD
PMID:6720266
RGD:9491754
NCBI chr13:85,135,384...85,175,178
Ensembl chr13:85,124,977...85,175,178
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F2
coagulation factor II, thrombin
no_association
ISO
DNA:SNP: :20210G>A (human)
RGD
PMID:22800650 PMID:14994919
RGD:7387258 , RGD:7394774
NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
G
F5
coagulation factor V
onset no_association
ISO
associated with Behcet Syndrome;DNA:missense mutation:cds:p.R506Q (human) CTD Direct Evidence: marker/mechanism DNA:missense mutation:cds:1691G>A (human) DNA:SNP:cds:1691G>A (human)
CTD RGD
PMID:12022286 PMID:10511031 PMID:16113792 PMID:10634550
RGD:7394767 , RGD:7394778 , RGD:7394773
NCBI chr13:76,513,509...76,583,106
Ensembl chr13:76,513,255...76,582,317
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Fgf2
fibroblast growth factor 2
IEP
RGD
PMID:10342378
RGD:8655593
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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Il1b
interleukin 1 beta
IEP
mRNA:increased expression:neuroretina, retinal pigment epithelium (rat)
RGD
PMID:21487926
RGD:5490120
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
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Il6
interleukin 6
IEP
RGD
PMID:21487926
RGD:5490120
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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Itga2
integrin subunit alpha 2
susceptibility
ISO
DNA:snp, haplotype:cds:g.807C>T (human) CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:12928694 PMID:12928694
RGD:8686430
NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
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Kcnj10
potassium inwardly-rectifying channel, subfamily J, member 10
IEP
RGD
PMID:21487926
RGD:5490120
NCBI chr13:84,802,026...84,835,383
Ensembl chr13:84,802,009...84,835,461
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Mmp2
matrix metallopeptidase 2
ISO
DNA:SNP:promoter:-1306C>T (rs243865) (human)
RGD
PMID:23791966
RGD:8657048
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
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Mthfr
methylenetetrahydrofolate reductase
susceptibility no_association
ISO
DNA:SNP: :677C>T(human) DNA:missense mutation:cds:677C>T (human) DNA:SNP: :1298A>C(human)
RGD
PMID:10485556 PMID:24250697 PMID:23289804
RGD:7387256 , RGD:10449421 , RGD:10449405
NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797
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Nrp1
neuropilin 1
ISS
MouseDO
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Pon1
paraoxonase 1
susceptibility
ISO
DNA:missense mutation:cds:p.L55M (human) protein:decreased activity:serum (human)
RGD
PMID:23441121 PMID:18084236
RGD:8547547 , RGD:8547555
NCBI chr 4:33,294,737...33,325,759
Ensembl chr 4:33,294,722...33,321,360
G
Serpine1
serpin family E member 1
susceptibility
ISO
DNA:deletion:promoter:g.-676_-674delG (human) protein:increased activity:plasma (human)
RGD
PMID:16244763 PMID:15213845
RGD:8547742 , RGD:8547805
NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
G
Serpinf1
serpin family F member 1
ISO
protein:decreased expression:vitreous humor (human)
RGD
PMID:21275514
RGD:8554901
NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
G
Vegfa
vascular endothelial growth factor A
IEP ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:16680105 PMID:21487926
RGD:5490120
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Vegfb
vascular endothelial growth factor B
IEP
RGD
PMID:21487926
RGD:5490120
NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
G
Pdgfrb
platelet derived growth factor receptor beta
ISS
MouseDO
NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843
G
Itga2
integrin subunit alpha 2
no_association
ISO
DNA:snp:cds:g.807C>T (human)
RGD
PMID:16157382
RGD:1582301
NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
G
Serpinf1
serpin family F member 1
ISO
protein:decreased expression:vitreous humor (human)
RGD
PMID:20714746
RGD:8554903
NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
G
Ndp
norrin cystine knot growth factor NDP
ISO
DNA:missense mutation: :p.L124F (human) ClinVar Annotator: match by term: Exudative vitreoretinopathy 2, X-linked | ClinVar Annotator: match by term: Exudative vitreoretinopathy, X-linked
ClinVar OMIM RGD
PMID:95062 PMID:1307245 PMID:7558002 PMID:7795608 PMID:8252044 PMID:8457509 PMID:8535448 PMID:8832723 PMID:8946107 PMID:9143917 PMID:9382152 PMID:9618247 PMID:11337749 PMID:17050281 PMID:17296899 PMID:20491809 PMID:25741868 PMID:26158506 PMID:28492532 PMID:35328049 PMID:8252044 More...
RGD:8694209
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all