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Gene: Tspan12 (tetraspanin 12) Rattus norvegicus
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Symbol: Tspan12
Name: tetraspanin 12
Description: Predicted to be involved in cell surface receptor signaling pathway; regulation of angiogenesis; and retina layer formation. Predicted to localize to the integral component of plasma membrane. Human ortholog(s) of this gene implicated in exudative vitreoretinopathy. Orthologous to human TSPAN12 (tetraspanin 12); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362326; MGC109305; tetraspanin-12; Tm4sf12; transmembrane 4 superfamily member 12; tspan-12
Orthologs:
Homo sapiens (human) : TSPAN12 (tetraspanin 12)  HGNC  Alliance
Mus musculus (house mouse) : Tspan12 (tetraspanin 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tspan12 (tetraspanin 12)
Pan paniscus (bonobo/pygmy chimpanzee) : TSPAN12 (tetraspanin 12)
Canis lupus familiaris (dog) : TSPAN12 (tetraspanin 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tspan12 (tetraspanin 12)
Sus scrofa (pig) : TSPAN12 (tetraspanin 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0448,852,823 - 48,953,240 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0448,641,401 - 48,715,044 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4448,084,836 - 48,164,956 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1448,315,410 - 48,395,530 (-)NCBI
Celera445,518,037 - 45,592,649 (-)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tspan12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311102
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.