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ONTOLOGY REPORT - ANNOTATIONS

Term:negative regulation of gene expression
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Accession:GO:0010629 term browser browse the term
Definition:Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).
Comment:This term covers any process that negatively regulates the rate of production of a mature gene product, and so includes processes that negatively regulate that rate by reducing the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that reduces the level, stability or availability of mRNA or circRNA for translation and thereby reduces the rate of production of the encoded protein via translation.
Synonyms:related_synonym: gene silencing

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negative regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP binding cassette subfamily C member 2 involved_in ISO PMID:17437408 ARUK-UCL PMID:17437408 RGD:14929203 NCBI chrNW_004955507:5,724,788...5,791,281
Ensembl chrNW_004955507:5,724,762...5,790,812 		JBrowse link
G Acvr1b activin A receptor type 1B acts_upstream_of_or_within ISO (PMID:23152446) MGI PMID:23152446 NCBI chrNW_004955547:2,311,573...2,366,106
Ensembl chrNW_004955547:2,323,771...2,367,263 		JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:12941632) BHF-UCL PMID:12941632 NCBI chrNW_004955547:2,278,548...2,293,865
Ensembl chrNW_004955547:2,279,042...2,294,443 		JBrowse link
G Adam10 ADAM metallopeptidase domain 10 acts_upstream_of_or_within ISO (PMID:24530397) ARUK-UCL PMID:24530397 NCBI chrNW_004955450:15,853,372...15,927,966
Ensembl chrNW_004955450:15,853,366...15,928,200 		JBrowse link
G Adipor2 adiponectin receptor 2 ISO RGD PMID:29237572 RGD:24922203 NCBI chrNW_004955454:4,243,898...4,327,255
Ensembl chrNW_004955454:4,243,898...4,327,308 		JBrowse link
G Adnp activity dependent neuroprotector homeobox ISO p53 RGD PMID:15314252 RGD:2312780 NCBI chrNW_004955445:7,498,223...7,530,828
Ensembl chrNW_004955445:7,492,257...7,531,862 		JBrowse link
G Aff2 ALF transcription elongation factor 2 acts_upstream_of_or_within ISO (PMID:23562910) MGI PMID:23562910 NCBI chrNW_004955498:1,012,323...1,497,031
Ensembl chrNW_004955498:1,012,555...1,492,616 		JBrowse link
G Agt angiotensinogen involved_in ISO (PMID:24296617) BHF-UCL PMID:24296617 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357 		JBrowse link
G Aif1 allograft inflammatory factor 1 ISO 10 proteins, including ADAM3 RGD PMID:16157606 RGD:2313017 NCBI chrNW_004955437:157,509...158,919
Ensembl chrNW_004955437:157,509...158,919 		JBrowse link
G Akirin2 akirin 2 ISO MKP-1 RGD PMID:18460465 RGD:2306009 NCBI chrNW_004955411:14,600,106...14,619,374
Ensembl chrNW_004955411:14,600,106...14,619,069 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:19933931) BHF-UCL PMID:19933931 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904 		JBrowse link
G Anapc2 anaphase promoting complex subunit 2 ISO Ppfia1 RGD PMID:17419996 RGD:14696670 NCBI chrNW_004955513:5,183,472...5,194,253
Ensembl chrNW_004955513:5,183,472...5,194,253 		JBrowse link
G Anxa7 annexin A7 involved_in ISO (PMID:24007983) UniProt PMID:24007983 NCBI chrNW_004955437:18,394,371...18,421,779 JBrowse link
G Apln apelin involved_in ISO (PMID:23263626) BHF-UCL PMID:23263626 NCBI chrNW_004955473:5,346,822...5,356,359
Ensembl chrNW_004955473:5,346,747...5,356,359 		JBrowse link
G Aplnr apelin receptor acts_upstream_of ISO (PMID:23603510) BHF-UCL PMID:23603510 NCBI chrNW_004955511:2,321,445...2,324,417
Ensembl chrNW_004955511:2,322,920...2,324,068 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:18377911) ARUK-UCL PMID:18377911 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888 		JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:18234671)
(PMID:26006083)
(PMID:22198949), (PMID:27853422), (PMID:28008308), (PMID:29061364)		 ARUK-UCL PMID:18234671 PMID:22198949 PMID:26006083 PMID:27853422 PMID:28008308 More... NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268 		JBrowse link
G Atoh8 atonal bHLH transcription factor 8 involved_in ISO (PMID:27780851) BHF-UCL PMID:27780851 NCBI chrNW_004955424:1,775,139...1,803,106
Ensembl chrNW_004955424:1,776,127...1,802,763 		JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:25147342) ARUK-UCL PMID:25147342 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694 		JBrowse link
G Aurka aurora kinase A involved_in ISO (PMID:28218735) UniProt PMID:28218735 NCBI chrNW_004955445:2,831,073...2,853,151
Ensembl chrNW_004955445:2,831,157...2,853,357 		JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO (PMID:18076571) MGI PMID:18076571 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430 		JBrowse link
G Bak1 BCL2 antagonist/killer 1 ISO p16, cyclin D1, COX 2 RGD PMID:18349538 RGD:2316126 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO (PMID:18317593), (PMID:19150989) MGI PMID:18317593 PMID:19150989 NCBI chrNW_004955433:14,266,190...14,321,780
Ensembl chrNW_004955433:14,266,190...14,296,929 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (PMID:18317593), (PMID:19150989) MGI PMID:18317593 PMID:19150989 NCBI chrNW_004955450:4,624,634...4,668,470
Ensembl chrNW_004955450:4,631,266...4,662,719 		JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:19657335) MGI PMID:19657335 NCBI chrNW_004955424:23,233,523...23,330,679
Ensembl chrNW_004955424:23,233,523...23,330,679 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:28124060)
(PMID:15322112)
(PMID:23399447)		 BHF-UCL
MGI		 PMID:15322112 PMID:23399447 PMID:28124060 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:28124060)
(PMID:11493558)		 BHF-UCL
MGI		 PMID:11493558 PMID:28124060 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:11854453) BHF-UCL PMID:11854453 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
G Brip1 BRCA1 interacting DNA helicase 1 ISO RGD PMID:12511571 RGD:11251702 NCBI chrNW_004955451:2,705,834...2,820,610
Ensembl chrNW_004955451:2,707,793...2,818,592 		JBrowse link
G C1qtnf3 C1q and TNF related 3 involved_in ISO (PMID:20952387) UniProt PMID:20952387 NCBI chrNW_004955426:19,588,637...19,606,557
Ensembl chrNW_004955426:19,585,460...19,606,557 		JBrowse link
G Ccdc3 coiled-coil domain containing 3 acts_upstream_of_or_within ISO (PMID:28827783) MGI PMID:28827783 NCBI chrNW_004955462:909,300...1,013,927
Ensembl chrNW_004955462:909,300...1,013,927 		JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO (PMID:18597638) MGI PMID:18597638 NCBI chrNW_004955436:12,523,602...12,526,986
Ensembl chrNW_004955436:12,522,944...12,526,480 		JBrowse link
G Ccnb1 cyclin B1 ISO c-mos RGD PMID:15291744 RGD:1578405 NCBI chrNW_004955446:140,661...149,500
Ensembl chrNW_004955446:140,093...149,500 		JBrowse link
G Cd28 CD28 molecule involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd34 CD34 molecule involved_in ISO (PMID:15969628) UniProt PMID:15969628 NCBI chrNW_004955406:43,116,688...43,130,405
Ensembl chrNW_004955406:43,117,816...43,130,463 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313 		JBrowse link
G Cd3e CD3e molecule involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cd46 CD46 molecule involved_in ISO (PMID:23086448) UniProt PMID:23086448 NCBI chrNW_004955406:43,002,817...43,034,555 JBrowse link
G Cdk1 cyclin dependent kinase 1 acts_upstream_of_or_within ISO PMID:28350193 ARUK-UCL PMID:28350193 RGD:40902962 NCBI chrNW_004955425:14,210,681...14,226,474
Ensembl chrNW_004955425:14,210,680...14,226,474 		JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (PMID:11981756) MGI PMID:11981756 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479 		JBrowse link
G Celf1 CUGBP Elav-like family member 1 acts_upstream_of_or_within ISO (PMID:27230130) ARUK-UCL PMID:27230130 NCBI chrNW_004955422:742,017...817,649
Ensembl chrNW_004955422:742,017...817,647 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO (PMID:33301730)
(PMID:33859416)		 UniProt PMID:33301730 PMID:33859416 NCBI chrNW_004955413:4,191,619...4,228,225
Ensembl chrNW_004955413:4,191,619...4,228,225 		JBrowse link
G Chmp1a charged multivesicular body protein 1A acts_upstream_of_or_within ISO (PMID:11559747) UniProt PMID:11559747 NCBI chrNW_004955541:3,216,972...3,223,636
Ensembl chrNW_004955541:3,216,972...3,223,634 		JBrowse link
G Cilp cartilage intermediate layer protein involved_in ISO (PMID:29167509) BHF-UCL PMID:29167509 NCBI chrNW_004955450:10,231,082...10,244,632
Ensembl chrNW_004955450:10,232,641...10,245,945 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:15051727)
PMID:26240138		 UniProt
BHF-UCL		 PMID:15051727 PMID:26240138 RGD:13210532 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677 		JBrowse link
G Cldn19 claudin 19 involved_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chrNW_004955537:2,265,711...2,271,096
Ensembl chrNW_004955537:2,265,711...2,271,289 		JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998)
(PMID:30734065)		 ARUK-UCL PMID:25323998 PMID:30734065 NCBI chrNW_004955442:18,509,501...18,511,267
Ensembl chrNW_004955442:18,509,676...18,510,332 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:25038453) BHF-UCL PMID:25038453 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Cnpy2 canopy FGF signaling regulator 2 acts_upstream_of ISO (PMID:22378787) BHF-UCL PMID:22378787 NCBI chrNW_004955458:3,921,208...3,924,785
Ensembl chrNW_004955458:3,920,743...3,924,781 		JBrowse link
G Cpne1 copine 1 involved_in ISO (PMID:18212740) UniProt PMID:18212740 NCBI chrNW_004955422:25,793,841...25,837,680
Ensembl chrNW_004955422:25,793,819...25,837,564
Ensembl chrNW_004955422:25,793,819...25,837,564 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:21816899 RGD:10059418 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 involved_in ISO (PMID:27121396) BHF-UCL PMID:27121396 NCBI chrNW_004955422:1,702,131...1,734,603
Ensembl chrNW_004955422:1,700,692...1,734,773 		JBrowse link
G Crh corticotropin releasing hormone ISO Lhb RGD PMID:20663987 RGD:5508201 NCBI chrNW_004955444:12,989,210...12,991,300 JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO Lhb, Fshb RGD PMID:19193717 RGD:2317015 NCBI chrNW_004955410:31,830,333...31,874,384
Ensembl chrNW_004955410:31,828,506...31,875,100 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:23959425) ARUK-UCL PMID:23959425 NCBI chrNW_004955442:19,358,202...19,388,552
Ensembl chrNW_004955442:19,358,081...19,388,815 		JBrowse link
G Cryaa crystallin alpha A acts_upstream_of_or_within ISO (PMID:17893660) MGI PMID:17893660 NCBI chrNW_004955407:38,880,088...38,892,946
Ensembl chrNW_004955407:38,880,086...38,925,642 		JBrowse link
G Cryab crystallin alpha B acts_upstream_of_or_within ISO (PMID:17893660) MGI PMID:17893660 NCBI chrNW_004955412:13,626,018...13,629,495
Ensembl chrNW_004955412:13,625,363...13,640,426 		JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO (PMID:18614575) UniProt PMID:18614575 NCBI chrNW_004955484:9,041,226...9,092,924
Ensembl chrNW_004955484:9,042,524...9,064,927 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO PMID:23270756
(PMID:19122665)		 BHF-UCL
ParkinsonsUK-UCL		 PMID:19122665 PMID:23270756 RGD:13210526 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 acts_upstream_of_or_within ISO (PMID:29048659) ARUK-UCL PMID:29048659 NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643 		JBrowse link
G Daxx death domain associated protein involved_in ISO (PMID:10698492) UniProt PMID:10698492 NCBI chrNW_004955437:1,869,692...1,874,041
Ensembl chrNW_004955437:1,869,572...1,873,050 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) ParkinsonsUK-UCL PMID:23675531 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856 		JBrowse link
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:24369117) ParkinsonsUK-UCL PMID:24369117 NCBI chrNW_004955514:452,548...475,240
Ensembl chrNW_004955514:453,886...464,978 		JBrowse link
G Dicer1 dicer 1, ribonuclease III involved_in
acts_upstream_of		 ISO (PMID:23322395)
(PMID:22105995)		 ARUK-UCL PMID:22105995 PMID:23322395 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO (PMID:20860622) UniProt PMID:20860622 NCBI chrNW_004955407:42,857,297...42,961,831
Ensembl chrNW_004955407:42,857,344...42,959,265 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (PMID:23388056) UniProt PMID:23388056 NCBI chrNW_004955416:7,807,049...7,816,346
Ensembl chrNW_004955416:7,807,049...7,817,420 		JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:27021683)
(PMID:29117290)		 BHF-UCL
MGI		 PMID:27021683 PMID:29117290 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ISO RGD PMID:27056896 RGD:401959209 NCBI chrNW_004955407:36,456,628...36,588,940
Ensembl chrNW_004955407:36,453,098...36,589,382 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (PMID:18276788) MGI PMID:18276788 NCBI chrNW_004955424:13,756,130...13,970,437
Ensembl chrNW_004955424:13,756,130...13,970,436 		JBrowse link
G Edn1 endothelin 1 involved_in ISO PMID:28484848 BHF-UCL PMID:28484848 RGD:13601996 NCBI chrNW_004955465:2,287,906...2,314,945
Ensembl chrNW_004955465:2,287,798...2,314,753 		JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (PMID:23152784) MGI PMID:23152784 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO Arc RGD PMID:17632064 RGD:10044262 NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (PMID:25056700) BHF-UCL PMID:25056700 NCBI chrNW_004955469:9,049,666...9,057,692
Ensembl chrNW_004955469:9,049,662...9,057,684 		JBrowse link
G Eng endoglin involved_in ISO (PMID:12941632) BHF-UCL PMID:12941632 NCBI chrNW_004955419:818,797...853,319
Ensembl chrNW_004955419:818,932...852,694 		JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO (PMID:18824542) MGI PMID:18824542 NCBI chrNW_004955436:14,925,452...14,982,357
Ensembl chrNW_004955436:14,926,123...14,983,180 		JBrowse link
G Erp29 endoplasmic reticulum protein 29 involved_in ISO (PMID:22064321) ParkinsonsUK-UCL PMID:22064321 NCBI chrNW_004955482:8,572,227...8,579,589
Ensembl chrNW_004955482:8,572,227...8,579,946 		JBrowse link
G Esr1 estrogen receptor 1 involved_in ISO (PMID:21695196) UniProt PMID:21695196 NCBI chrNW_004955439:9,588,631...9,953,606
Ensembl chrNW_004955439:9,588,201...9,963,353 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO Cdkn1c, also known as p57kip2, cyclin-dependent kinase inhibitor 1c RGD PMID:22821416 RGD:7242953 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:23823476) BHF-UCL PMID:23823476 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881 		JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (PMID:24681597) CAFA PMID:24681597 NCBI chrNW_004955415:16,447,921...16,483,221
Ensembl chrNW_004955415:16,446,934...16,483,369 		JBrowse link
G Fgf19 fibroblast growth factor 19 involved_in ISO (PMID:19085950) UniProt PMID:19085950 NCBI chrNW_004955422:16,415,880...16,419,528
Ensembl chrNW_004955422:16,415,648...16,420,515 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:24259513)
(PMID:18191119)		 MGI PMID:18191119 PMID:24259513 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:20053668) MGI PMID:20053668 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (PMID:24259513) MGI PMID:24259513 NCBI chrNW_004955408:29,370,480...29,383,531
Ensembl chrNW_004955408:29,370,468...29,383,971 		JBrowse link
G Flot2 flotillin 2 involved_in ISO (PMID:24612608) UniProt PMID:24612608 NCBI chrNW_004955481:4,276,847...4,298,523
Ensembl chrNW_004955481:4,276,860...4,298,523 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:23235829) RGD
UniProt		 PMID:23235829 PMID:24338128 RGD:11667958 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Foxl2 forkhead box L2 ISO Star, Fst RGD PMID:23567549 RGD:151893499 NCBI chrNW_004955501:83,965...84,476 JBrowse link
G Foxo1 forkhead box O1 involved_in ISO (PMID:24280217) AgBase PMID:24280217 NCBI chrNW_004955431:5,797,359...5,890,758 JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:30111844) ARUK-UCL PMID:30111844 NCBI chrNW_004955421:16,595,445...17,075,923
Ensembl chrNW_004955421:16,595,471...17,075,923 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:24501220) MGI PMID:24501220 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054 		JBrowse link
G Gata2 GATA binding protein 2 involved_in ISO (PMID:27780851) BHF-UCL PMID:27780851 NCBI chrNW_004955429:15,326,551...15,334,774
Ensembl chrNW_004955429:15,327,113...15,336,460 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:17357106) MGI PMID:17357106 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (PMID:25590961) BHF-UCL PMID:25590961 NCBI chrNW_004955403:52,958,318...53,029,267
Ensembl chrNW_004955403:52,987,644...53,029,267 		JBrowse link
G Gata5 GATA binding protein 5 involved_in ISO (PMID:21633169) BHF-UCL PMID:21633169 NCBI chrNW_004955528:1,595,231...1,604,979
Ensembl chrNW_004955528:1,595,231...1,604,979 		JBrowse link
G Ggnbp2 gametogenetin binding protein 2 acts_upstream_of_or_within ISO (PMID:26764350) MGI PMID:26764350 NCBI chrNW_004955451:1,345,720...1,386,100
Ensembl chrNW_004955451:1,345,626...1,386,099 		JBrowse link
G Gja1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (PMID:19439426) MGI PMID:19439426 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:23840305)
PMID:23907461		 AgBase
UniProt		 PMID:23840305 PMID:23907461 RGD:8553942 NCBI chrNW_004955460:8,790,798...8,794,902
Ensembl chrNW_004955460:8,790,798...8,794,902 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of ISO (PMID:27050373), (PMID:28122350) ARUK-UCL PMID:27050373 PMID:28122350 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in ISO (PMID:24161931) BHF-UCL PMID:24161931 NCBI chrNW_004955403:33,478,034...33,481,613
Ensembl chrNW_004955403:33,478,924...33,481,608 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:25578313) UniProt PMID:25578313 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:16581785) CACAO PMID:16581785 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864 		JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO (PMID:23926128) MGI PMID:23926128 NCBI chrNW_004955451:17,223,217...17,246,451
Ensembl chrNW_004955451:17,223,287...17,244,051 		JBrowse link
G Hdac8 histone deacetylase 8 ISO Stx1a RGD PMID:28559304 RGD:13208603 NCBI chrNW_004955475:11,748,502...12,012,884
Ensembl chrNW_004955475:11,748,365...12,013,241 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO RGD PMID:19670267 RGD:9685170 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447 		JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:22615585)
(PMID:16025100)		 MGI
BHF-UCL		 PMID:16025100 PMID:22615585 NCBI chrNW_004955444:1,498,444...1,502,099
Ensembl chrNW_004955444:1,498,675...1,500,945 		JBrowse link
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:20382855)
(PMID:16025100)
(PMID:22615585)		 MGI
BHF-UCL		 PMID:16025100 PMID:20382855 PMID:22615585 NCBI chrNW_004955436:7,060,930...7,070,610
Ensembl chrNW_004955436:7,060,930...7,070,030 		JBrowse link
G Heyl hes related family bHLH transcription factor with YRPW motif like acts_upstream_of_or_within ISO (PMID:22615585) MGI PMID:22615585 NCBI chrNW_004955452:17,137,066...17,152,714
Ensembl chrNW_004955452:17,134,770...17,152,924 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO (PMID:26879375) BHF-UCL PMID:26879375 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497 		JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:15541338), (PMID:17974976) UniProt PMID:15541338 PMID:17974976 NCBI chrNW_004955412:20,236,607...20,247,288
Ensembl chrNW_004955412:20,242,317...20,249,456 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:23495099) AgBase PMID:23495099 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO Mmp9 RGD PMID:16683234 RGD:10042976 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO Orm1 RGD PMID:9553145 RGD:2303817 NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774 		JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:23027131) BHF-UCL PMID:23027131 NCBI chrNW_004955476:11,508,446...11,510,333
Ensembl chrNW_004955476:11,508,126...11,510,333 		JBrowse link
G Hsf1 heat shock transcription factor 1 ISO Igf2r RGD PMID:24786827 RGD:10402547 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351 		JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 ISO Tnf, Il1b, Icam1, Nos2 RGD PMID:17473852 RGD:5688754 NCBI chrNW_004955408:4,379,825...4,422,710
Ensembl chrNW_004955408:4,379,825...4,423,381 		JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (PMID:20231428) MGI PMID:20231428 NCBI chrNW_004955422:29,337,969...29,339,178
Ensembl chrNW_004955422:29,337,757...29,339,178 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO p21
(PMID:18474814)		 RGD
UniProt		 PMID:11706002 PMID:18474814 RGD:619536 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783 		JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein acts_upstream_of_or_within ISO (PMID:23523789) MGI PMID:23523789 NCBI chrNW_004955452:3,537,352...3,538,921
Ensembl chrNW_004955452:3,537,021...3,560,954 		JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:23817958)
(PMID:29061364)		 UniProt
ARUK-UCL		 PMID:23817958 PMID:29061364 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:29167509)
(PMID:19933931)		 BHF-UCL PMID:19933931 PMID:29167509 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152 		JBrowse link
G Il1b interleukin 1 beta ISO Nr2e1 RGD PMID:23168994 RGD:7175538 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase like 1 acts_upstream_of_or_within ISO (PMID:15654325) MGI PMID:15654325 NCBI chrNW_004955414:19,146,304...19,163,923
Ensembl chrNW_004955414:19,145,432...19,163,923 		JBrowse link
G Ins insulin acts_upstream_of ISO (PMID:31501273) ARUK-UCL PMID:31501273 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419 		JBrowse link
G Insr insulin receptor ISO SOCS3 levels in hypothalamus RGD PMID:17585961 RGD:2290473 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149 		JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 acts_upstream_of_or_within ISO (PMID:18604197) MGI PMID:18604197 NCBI chrNW_004955545:2,627,334...2,663,786
Ensembl chrNW_004955545:2,628,552...2,663,737 		JBrowse link
G Itgb8 integrin subunit beta 8 involved_in ISO (PMID:24312400) UniProt PMID:24312400 NCBI chrNW_004955410:23,011,874...23,099,191
Ensembl chrNW_004955410:23,011,973...23,097,021 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163 		JBrowse link
G Kdm4a lysine demethylase 4A involved_in ISO (PMID:25660547) ParkinsonsUK-UCL PMID:25660547 NCBI chrNW_004955537:3,199,394...3,255,945
Ensembl chrNW_004955537:3,199,394...3,255,945 		JBrowse link
G Kdr kinase insert domain receptor involved_in ISO (PMID:26879375) BHF-UCL PMID:26879375 NCBI chrNW_004955447:15,810,816...15,851,702
Ensembl chrNW_004955447:15,810,815...15,853,583 		JBrowse link
G Keap1 kelch like ECH associated protein 1 ISO RGD PMID:20026152 RGD:6902900 NCBI chrNW_004955495:1,704,695...1,711,339
Ensembl chrNW_004955495:1,704,695...1,711,290 		JBrowse link
G Klf4 KLF transcription factor 4 involved_in ISO (PMID:22267480) BHF-UCL PMID:22267480 NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174 		JBrowse link
G Kpna7 karyopherin subunit alpha 7 acts_upstream_of_or_within ISO (PMID:20699224) MGI PMID:20699224 NCBI chrNW_004955460:14,901,350...14,931,209
Ensembl chrNW_004955460:14,901,207...14,924,746 		JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 acts_upstream_of_or_within ISO (PMID:22770845) MGI PMID:22770845 NCBI chrNW_004955413:26,831,065...26,847,638
Ensembl chrNW_004955413:26,831,066...26,851,859 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (PMID:24255059) BHF-UCL PMID:24255059 NCBI chrNW_004955495:2,114,702...2,135,584
Ensembl chrNW_004955495:2,114,434...2,138,056 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25578313)
(PMID:23408620)		 UniProt PMID:23408620 PMID:25578313 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Lgmn legumain involved_in ISO (PMID:21237226) ARUK-UCL PMID:21237226 NCBI chrNW_004955438:14,905,856...14,938,722
Ensembl chrNW_004955438:14,905,856...14,939,256 		JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (PMID:31023188) BHF-UCL PMID:31023188 NCBI chrNW_004955458:4,861,431...4,941,939
Ensembl chrNW_004955458:4,861,431...4,941,146 		JBrowse link
G Lrp3 LDL receptor related protein 3 involved_in ISO (PMID:28340487) ARUK-UCL PMID:28340487 NCBI chrNW_004955468:2,957,156...2,967,678
Ensembl chrNW_004955468:2,957,145...2,967,678 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer acts_upstream_of_or_within ISO (PMID:18694567) MGI PMID:18694567 NCBI chrNW_004955462:9,902,978...9,934,814
Ensembl chrNW_004955462:9,903,006...9,934,570 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chrNW_004955495:4,695,239...4,718,380
Ensembl chrNW_004955495:4,695,768...4,722,098 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO Cxcl12 RGD PMID:26002466 RGD:155804277 NCBI chrNW_004955411:17,177,335...17,229,957
Ensembl chrNW_004955411:17,177,335...17,229,957 		JBrowse link
G Mapt microtubule associated protein tau involved_in ISO (PMID:23164821) ARUK-UCL PMID:23164821 NCBI chrNW_004955478:10,222,439...10,271,439
Ensembl chrNW_004955478:10,225,823...10,271,442 		JBrowse link
G Mark1 microtubule affinity regulating kinase 1 acts_upstream_of ISO (PMID:31281935) ARUK-UCL PMID:31281935 NCBI chrNW_004955520:3,087,581...3,205,525
Ensembl chrNW_004955520:3,086,887...3,205,525 		JBrowse link
G Max MYC associated factor X ISO RGD PMID:7791753 RGD:2316831 NCBI chrNW_004955466:4,816,568...4,842,659
Ensembl chrNW_004955466:4,816,568...4,842,659 		JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO Gfap RGD PMID:16881068 RGD:9588644 NCBI chrNW_004955402:35,320,755...35,334,751
Ensembl chrNW_004955402:35,319,810...35,334,678 		JBrowse link
G Mdm2 MDM2 proto-oncogene ISO Notch1, Hes1 RGD PMID:28100501 RGD:152995503 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 involved_in ISO Bdnf
(PMID:23960241)		 RGD
BHF-UCL		 PMID:19217433 PMID:23960241 RGD:11069822 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:16680724) UniProt PMID:16680724 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:23994610) MGI PMID:23994610 NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647 		JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:10562313) BHF-UCL PMID:10562313 NCBI chrNW_004955455:8,367,566...8,368,460
Ensembl chrNW_004955455:8,367,566...8,368,460 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO (PMID:18317593), (PMID:19150989) MGI PMID:18317593 PMID:19150989 NCBI chrNW_004955415:20,292,311...20,315,850
Ensembl chrNW_004955415:20,292,663...20,300,797 		JBrowse link
G Morc1 MORC family CW-type zinc finger 1 involved_in ISO (PMID:26275923) MGI PMID:26275923 NCBI chrNW_004955427:9,790,069...9,974,140
Ensembl chrNW_004955427:9,789,971...9,968,613 		JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in ISO (PMID:11240025) ARUK-UCL PMID:11240025 NCBI chrNW_004955463:1,197,086...1,263,943
Ensembl chrNW_004955463:1,197,022...1,264,765 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of ISO (PMID:24028588) UniProt PMID:24028588 NCBI chrNW_004955514:4,923,552...4,927,471
Ensembl chrNW_004955514:4,923,552...4,927,471 		JBrowse link
G Musk muscle associated receptor tyrosine kinase ISO epsilon-acetylcholine receptor RGD PMID:15604144 RGD:2317103 NCBI chrNW_004955419:16,387,770...16,484,266
Ensembl chrNW_004955419:16,387,770...16,484,266 		JBrowse link
G Myadm myeloid associated differentiation marker involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chrNW_004955604:280,977...284,381
Ensembl chrNW_004955604:280,977...284,381 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO Adipor1 RGD PMID:23349663 RGD:7207857 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in ISO (PMID:21796614) BHF-UCL PMID:21796614 NCBI chrNW_004955487:9,219,528...9,224,818
Ensembl chrNW_004955487:9,219,528...9,224,818 		JBrowse link
G Myt1 myelin transcription factor 1 acts_upstream_of_or_within ISO (PMID:17928203) MGI PMID:17928203 NCBI chrNW_004955528:48,198...108,293
Ensembl chrNW_004955528:47,800...112,114 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO transcript levels RGD PMID:19608741 RGD:5688288 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 involved_in ISO (PMID:18776082) UniProt PMID:18776082 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
G Ndfip2 Nedd4 family interacting protein 2 involved_in ISO (PMID:18776082) UniProt PMID:18776082 NCBI chrNW_004955404:27,981,215...28,051,238
Ensembl chrNW_004955404:27,979,187...28,051,561 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:26687115) BHF-UCL PMID:26687115 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:17486276) UniProt PMID:17486276 NCBI chrNW_004955403:46,807,846...46,809,924
Ensembl chrNW_004955403:46,806,178...46,836,310 		JBrowse link
G Noct nocturnin involved_in ISO (PMID:20685873) UniProt PMID:20685873 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:21624478) MGI PMID:21624478 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (PMID:12085352) UniProt PMID:12085352 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:11306509) UniProt PMID:11306509 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259 		JBrowse link
G Notch2 notch receptor 2 involved_in ISO (PMID:11306509) UniProt PMID:11306509 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173 		JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:18625840) MGI PMID:18625840 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in ISO (PMID:19085950) UniProt PMID:19085950 NCBI chrNW_004955452:6,251,047...6,253,541
Ensembl chrNW_004955452:6,250,889...6,254,541 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 ISO RGD PMID:7971966 RGD:61674 NCBI chrNW_004955559:731,630...736,973
Ensembl chrNW_004955559:730,670...737,505 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:26078884) ARUK-UCL PMID:26078884 NCBI chrNW_004955441:16,230,977...17,178,003
Ensembl chrNW_004955441:16,234,070...17,178,005 		JBrowse link
G Nts neurotensin acts_upstream_of ISO (PMID:21806946) ARUK-UCL PMID:21806946 NCBI chrNW_004955405:23,696,258...23,758,487
Ensembl chrNW_004955405:23,748,280...23,758,529 		JBrowse link
G Ocln occludin involved_in ISO (PMID:21415414) ARUK-UCL PMID:21415414 NCBI chrNW_004955575:163,646...210,379 JBrowse link
G Oprd1 opioid receptor delta 1 involved_in ISO (PMID:24613828) ParkinsonsUK-UCL PMID:24613828 NCBI chrNW_004955452:7,866,790...7,913,399
Ensembl chrNW_004955452:7,866,758...7,913,399 		JBrowse link
G Ovol2 ovo like zinc finger 2 involved_in ISO (PMID:28455959) ARUK-UCL PMID:28455959 NCBI chrNW_004955415:26,825,284...26,843,438
Ensembl chrNW_004955415:26,825,284...26,843,438 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:22683601) ParkinsonsUK-UCL PMID:22683601 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Parp10 poly(ADP-ribose) polymerase family member 10 involved_in ISO (PMID:23575687) UniProt PMID:23575687 NCBI chrNW_004955454:2,644,718...2,651,962
Ensembl chrNW_004955454:2,645,003...2,651,604 		JBrowse link
G Parp14 poly(ADP-ribose) polymerase family member 14 involved_in ISO (PMID:27796300) UniProt PMID:27796300 NCBI chrNW_004955427:21,878,980...21,929,097
Ensembl chrNW_004955427:21,879,740...21,927,883 		JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in ISO (PMID:27796300) UniProt PMID:27796300 NCBI chrNW_004955427:21,770,158...21,806,091
Ensembl chrNW_004955427:21,770,577...21,804,717 		JBrowse link
G Pawr pro-apoptotic WT1 regulator involved_in ISO (PMID:25472717) BHF-UCL PMID:25472717 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710 		JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:23861867) AgBase PMID:23861867 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436 		JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO (PMID:23388056) UniProt PMID:23388056 NCBI chrNW_004955448:16,866,577...16,887,215
Ensembl chrNW_004955448:16,864,031...16,887,626 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:16530387), (PMID:23554459), (PMID:25089138) BHF-UCL PMID:16530387 PMID:23554459 PMID:25089138 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987 		JBrowse link
G Pgr progesterone receptor involved_in ISO (PMID:21695196) UniProt PMID:21695196 NCBI chrNW_004955412:4,643,839...4,693,478 JBrowse link
G Phb1 prohibitin 1 ISO alpha-smooth-muscle actin RGD PMID:17043753 RGD:2292410 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124 		JBrowse link
G Pias3 protein inhibitor of activated STAT 3 acts_upstream_of_or_within ISO (PMID:17442941) MGI PMID:17442941 NCBI chrNW_004955568:227,603...237,396
Ensembl chrNW_004955568:227,476...237,396 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO (PMID:22952941) Alzheimers_University_of_Toronto PMID:22952941 NCBI chrNW_004955414:6,871,220...6,970,569
Ensembl chrNW_004955414:6,871,520...6,969,208 		JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in ISO PMID:24749734 ParkinsonsUK-UCL PMID:24749734 RGD:10047218 NCBI chrNW_004955413:24,383,130...24,399,092
Ensembl chrNW_004955413:24,383,130...24,399,196 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024 		JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chrNW_004955486:3,813,923...3,837,563
Ensembl chrNW_004955486:3,813,923...3,838,119 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO PMID:24475098
(PMID:24475098)		 ParkinsonsUK-UCL PMID:24475098 RGD:10047288 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125 		JBrowse link
G Pla2g3 phospholipase A2 group III acts_upstream_of_or_within ISO (PMID:26637123) MGI PMID:26637123 RGD:11342276 NCBI chrNW_004955455:5,314,520...5,320,151
Ensembl chrNW_004955455:5,315,450...5,320,053 		JBrowse link
G Plag1 PLAG1 zinc finger involved_in ISO (PMID:19808959) UniProt PMID:19808959 NCBI chrNW_004955454:15,239,042...15,281,669
Ensembl chrNW_004955454:15,239,042...15,281,669 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:23847051) MGI PMID:23847051 NCBI chrNW_004955467:2,422,181...2,456,925
Ensembl chrNW_004955467:2,423,659...2,457,307 		JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in ISO (PMID:23069940) CACAO PMID:23069940 NCBI chrNW_004955411:24,714,899...24,722,048
Ensembl chrNW_004955411:24,715,088...24,716,695 		JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in ISO (PMID:28594399) ARUK-UCL PMID:28594399 NCBI chrNW_004955404:28,812,762...28,818,024 JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:23495099) AgBase PMID:23495099 NCBI chrNW_004955583:995,707...1,003,202 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in
acts_upstream_of_or_within		 ISO (PMID:28467929)
(PMID:21880694)
(PMID:16530456)
PMID:28867608		 ARUK-UCL
BHF-UCL
AgBase		 PMID:16530456 PMID:21880694 PMID:28467929 PMID:28867608 RGD:150521633 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387 		JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:28159925) ARUK-UCL PMID:28159925 NCBI chrNW_004955463:7,229,717...7,249,490
Ensembl chrNW_004955463:7,226,912...7,249,490 		JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISO (PMID:24161931) BHF-UCL PMID:24161931 NCBI chrNW_004955496:6,934,542...7,059,745
Ensembl chrNW_004955496:6,908,224...7,059,816 		JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO (PMID:21670299) MGI PMID:21670299 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056 		JBrowse link
G Prdm4 PR/SET domain 4 involved_in ISO PMID:23048031 ParkinsonsUK-UCL PMID:23048031 RGD:10054084 NCBI chrNW_004955405:41,335,019...41,354,625
Ensembl chrNW_004955405:41,336,199...41,353,261 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (PMID:27430620) ARUK-UCL PMID:27430620 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO (PMID:27430620) ARUK-UCL PMID:27430620 NCBI chrNW_004955464:2,996,608...3,062,197
Ensembl chrNW_004955464:3,003,837...3,062,197 		JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of ISO (PMID:28159925) ARUK-UCL PMID:28159925 NCBI chrNW_004955478:4,241,283...4,262,119
Ensembl chrNW_004955478:4,241,283...4,263,087 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19725078), (PMID:22314364) BHF-UCL PMID:19725078 PMID:22314364 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:28008308), (PMID:29061364) ARUK-UCL PMID:28008308 PMID:29061364 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737 		JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:17696759) GO_Central PMID:17696759 NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106)
(PMID:23871208), (PMID:23991106)		 UniProt PMID:23871208 PMID:23991106 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Ptrh2 peptidyl-tRNA hydrolase 2 involved_in ISO (PMID:15006356) UniProt PMID:15006356 NCBI chrNW_004955451:3,370,761...3,375,979
Ensembl chrNW_004955451:3,370,761...3,375,979 		JBrowse link
G Pum2 pumilio RNA binding family member 2 ISO RGD PMID:31606248 RGD:242905203 NCBI chrNW_004955469:2,810,825...2,886,911
Ensembl chrNW_004955469:2,810,573...2,886,611 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO (PMID:19451233) UniProt PMID:19451233 NCBI chrNW_004955530:78,488...83,297
Ensembl chrNW_004955530:78,426...83,297 		JBrowse link
G Rad21 RAD21 cohesin complex component ISO Nos2, Fcgr2b RGD PMID:36538854 RGD:243065265 NCBI chrNW_004955417:22,941,549...22,966,395
Ensembl chrNW_004955417:22,941,479...22,966,837 		JBrowse link
G Rara retinoic acid receptor alpha acts_upstream_of_or_within ISO (PMID:18026104) MGI PMID:18026104 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134 		JBrowse link
G Rb1 RB transcriptional corepressor 1 acts_upstream_of_or_within ISO (PMID:25100735) MGI PMID:25100735 NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576 		JBrowse link
G Rbl1 RB transcriptional corepressor like 1 acts_upstream_of_or_within ISO (PMID:25100735) MGI PMID:25100735 NCBI chrNW_004955422:24,620,068...24,695,203
Ensembl chrNW_004955422:24,620,078...24,695,229 		JBrowse link
G Rbl2 RB transcriptional corepressor like 2 acts_upstream_of_or_within ISO (PMID:25100735) MGI PMID:25100735 NCBI chrNW_004955433:11,185,726...11,237,645
Ensembl chrNW_004955433:11,185,077...11,237,645 		JBrowse link
G Rbms3 RNA binding motif single stranded interacting protein 3 involved_in ISO (PMID:28409548) UniProt PMID:28409548 NCBI chrNW_004955430:20,714,647...21,394,049
Ensembl chrNW_004955430:20,320,085...21,387,681 		JBrowse link
G Rcor1 REST corepressor 1 involved_in ISO (PMID:15907476) UniProt PMID:15907476 NCBI chrNW_004955538:1,774,910...1,880,550
Ensembl chrNW_004955538:1,774,910...1,880,545 		JBrowse link
G Rel REL proto-oncogene, NF-kB subunit involved_in ISO (PMID:22065573) CACAO PMID:22065573 NCBI chrNW_004955424:22,909,035...22,939,651
Ensembl chrNW_004955424:22,911,541...22,939,651 		JBrowse link
G Rnaseh2b ribonuclease H2 subunit B acts_upstream_of_or_within ISO (PMID:22802351) MGI PMID:22802351 NCBI chrNW_004955431:4,291,687...4,368,169
Ensembl chrNW_004955431:4,291,688...4,351,178 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO (PMID:25691540) BHF-UCL PMID:25691540 NCBI chrNW_004955407:12,593,911...13,485,723
Ensembl chrNW_004955407:13,107,235...13,487,053 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:29353861) ARUK-UCL PMID:29353861 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401 		JBrowse link
G Ros1 ROS proto-oncogene 1, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12773415) MGI PMID:12773415 NCBI chrNW_004955436:528,038...636,194
Ensembl chrNW_004955436:524,854...636,338 		JBrowse link
G Samd7 sterile alpha motif domain containing 7 involved_in ISO (PMID:23565263) UniProt PMID:23565263 NCBI chrNW_004955420:161,353...178,768
Ensembl chrNW_004955420:161,353...177,936 		JBrowse link
G Serpine1 serpin family E member 1 ISO caspase-3 RGD PMID:22659625 RGD:8547927 NCBI chrNW_004955456:16,147,523...16,157,040
Ensembl chrNW_004955456:16,145,944...16,157,142 		JBrowse link
G Serpinf1 serpin family F member 1 ISO Hif1a RGD PMID:21922517 RGD:8554899 NCBI chrNW_004955481:1,414,930...1,426,436
Ensembl chrNW_004955481:1,414,930...1,426,241 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (PMID:39096901) UniProt PMID:39096901 NCBI chrNW_004955588:290,497...338,438
Ensembl chrNW_004955588:290,168...338,426 		JBrowse link
G Sfmbt2 Scm like with four mbt domains 2 involved_in ISO (PMID:23385818) UniProt PMID:23385818 NCBI chrNW_004955421:23,691,648...23,913,781 JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10980594)
(PMID:19850029)		 UniProt
MGI		 PMID:10980594 PMID:19850029 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in ISO (PMID:10980594) UniProt PMID:10980594 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321 		JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO (PMID:24854121) ARUK-UCL PMID:24854121 NCBI chrNW_004955434:20,332,727...20,381,320
Ensembl chrNW_004955434:20,331,779...20,381,376 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:16396903) UniProt PMID:16396903 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:17916362)
(PMID:19479941), (PMID:23296834)		 CACAO
AgBase		 PMID:17916362 PMID:19479941 PMID:23296834 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663 		JBrowse link
G Slc24a3 solute carrier family 24 member 3 acts_upstream_of_or_within ISO (PMID:28602864) ARUK-UCL PMID:28602864 NCBI chrNW_004955415:27,477,801...27,930,108
Ensembl chrNW_004955415:27,477,819...27,928,383 		JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:16550171) ARUK-UCL PMID:16550171 NCBI chrNW_004955445:10,708,147...10,722,109
Ensembl chrNW_004955445:10,709,681...10,722,264 		JBrowse link
G Slc35c2 solute carrier family 35 member C2 acts_upstream_of_or_within ISO (PMID:20837470) MGI PMID:20837470 NCBI chrNW_004955445:10,984,675...10,996,707
Ensembl chrNW_004955445:10,984,237...10,996,707 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 acts_upstream_of ISO (PMID:24038088) ARUK-UCL PMID:24038088 NCBI chrNW_004955541:2,103,437...2,129,668
Ensembl chrNW_004955541:2,103,384...2,130,310 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO (PMID:18829537) MGI PMID:18829537 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908 		JBrowse link
G Slit3 slit guidance ligand 3 acts_upstream_of_or_within ISO (PMID:18829537) MGI PMID:18829537 NCBI chrNW_004955408:21,719,487...22,322,958
Ensembl chrNW_004955408:21,722,632...22,322,917 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO (PMID:23152446) MGI PMID:23152446 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of ISO (PMID:24378993) BHF-UCL PMID:24378993 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136 		JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of ISO (PMID:26400397) BHF-UCL PMID:26400397 NCBI chrNW_004955408:31,183,727...31,228,355
Ensembl chrNW_004955408:31,183,659...31,229,384 		JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) HGNC PMID:28195531 NCBI chrNW_004955478:11,002,174...11,015,123
Ensembl chrNW_004955478:11,002,174...11,015,123 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO (PMID:16396903) UniProt PMID:16396903 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22709416) UniProt PMID:22709416 NCBI chrNW_004955475:10,632,938...10,641,452
Ensembl chrNW_004955475:10,474,697...10,641,723 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (PMID:19808959) UniProt PMID:19808959 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:29290617)
(PMID:28628103)		 ARUK-UCL PMID:28628103 PMID:29290617 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO PMID:16530387 GO_Central PMID:16530387 RGD:8553998 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO Bcl2l11 RGD PMID:23737756 RGD:11039479 NCBI chrNW_004955445:13,663,474...13,669,102
Ensembl chrNW_004955445:13,661,209...13,669,102 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:23820254) BHF-UCL PMID:23820254 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687 		JBrowse link
G Stc2 stanniocalcin 2 involved_in ISO (PMID:9753616) UniProt PMID:9753616 NCBI chrNW_004955408:25,937,174...25,950,221
Ensembl chrNW_004955408:25,934,932...25,949,399 		JBrowse link
G Stox1 storkhead box 1 involved_in ISO (PMID:22253775) UniProt PMID:22253775 NCBI chrNW_004955437:22,122,296...22,165,848
Ensembl chrNW_004955437:22,124,272...22,165,848 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:18305152) CACAO PMID:18305152 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:18665841) UniProt PMID:18665841 NCBI chrNW_004955458:11,210,120...11,263,632
Ensembl chrNW_004955458:11,211,398...11,263,867 		JBrowse link
G Tcf4 transcription factor 4 acts_upstream_of_or_within ISO (PMID:20231428) MGI PMID:20231428 NCBI chrNW_004955402:39,735,596...40,066,151
Ensembl chrNW_004955402:39,735,600...40,066,151 		JBrowse link
G Tcl1a TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (PMID:17938240) MGI PMID:17938240 NCBI chrNW_004955438:16,934,650...16,952,926 JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:11927518) BHF-UCL PMID:11927518 NCBI chrNW_004955484:7,318,813...7,344,221
Ensembl chrNW_004955484:7,318,860...7,347,430 		JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO (PMID:11927518) BHF-UCL PMID:11927518 NCBI chrNW_004955504:649,248...669,796
Ensembl chrNW_004955504:651,779...670,589 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:22269326)
(PMID:26634652)
(PMID:19913496), (PMID:20067797), (PMID:22269326), (PMID:25163461), (PMID:26634652), (PMID:28467929), (PMID:29167509)
(PMID:29529050)		 BHF-UCL
MGI		 PMID:19913496 PMID:20067797 PMID:22269326 PMID:25163461 PMID:26634652 More... NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (PMID:25217442)
(PMID:21984612)		 BHF-UCL
UniProt		 PMID:21984612 PMID:25217442 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:22960625) BHF-UCL PMID:22960625 NCBI chrNW_004955423:2,573,851...2,765,353
Ensembl chrNW_004955423:2,573,795...2,765,772 		JBrowse link
G Tgif1 TGFB induced factor homeobox 1 ISO tropoelastin RGD PMID:18441095 RGD:2317192 NCBI chrNW_004955402:7,130,809...7,138,945
Ensembl chrNW_004955402:7,129,484...7,138,340 		JBrowse link
G Tiparp TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO (PMID:23275542) MGI PMID:23275542 NCBI chrNW_004955448:7,687,668...7,716,481
Ensembl chrNW_004955448:7,687,668...7,716,707 		JBrowse link
G Tle5 TLE family member 5, transcriptional modulator involved_in ISO (PMID:15006356) UniProt PMID:15006356 NCBI chrNW_004955495:5,328,299...5,336,195
Ensembl chrNW_004955495:5,327,595...5,336,715 		JBrowse link
G Tmf1 TATA element modulatory factor 1 acts_upstream_of_or_within ISO (PMID:22553199) MGI PMID:22553199 NCBI chrNW_004955421:18,810,199...18,837,767
Ensembl chrNW_004955421:18,810,199...18,837,761 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of
acts_upstream_of_or_within
involved_in		 ISO (PMID:22499991)
(PMID:26427354)
(PMID:15345745), (PMID:22267480), (PMID:26371161)
(PMID:20164187), (PMID:31124343), (PMID:31824476)
(PMID:24299952)		 BHF-UCL
MGI
ARUK-UCL		 PMID:15345745 PMID:20164187 PMID:22267480 PMID:22499991 PMID:24299952 More... NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO type 2 iodothyronine deiodinase in alpha tanycytes RGD PMID:20501675 RGD:5130988 NCBI chrNW_004955413:3,982,670...3,996,320
Ensembl chrNW_004955413:3,981,400...3,996,021 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:18625840) MGI PMID:18625840 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in ISO (PMID:26589288) BHF-UCL PMID:26589288 NCBI chrNW_004955417:11,063,217...11,079,389
Ensembl chrNW_004955417:11,067,715...11,073,635 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218) UniProt PMID:24882218 NCBI chrNW_004955414:21,495,593...21,513,703
Ensembl chrNW_004955414:21,481,129...21,514,548 		JBrowse link
G Ttbk1 tau tubulin kinase 1 involved_in ISO (PMID:19118186) ARUK-UCL PMID:19118186 NCBI chrNW_004955437:9,161,880...9,195,098
Ensembl chrNW_004955437:9,165,414...9,197,612 		JBrowse link
G Ucn urocortin ISO Pla2g6
ghrelin		 RGD PMID:14563694 PMID:21540451 RGD:5490560 RGD:5508192 NCBI chrNW_004955469:9,277,637...9,278,641
Ensembl chrNW_004955469:9,277,637...9,278,641 		JBrowse link
G Ucn2 urocortin 2 ISO Fshb RGD PMID:19193717 RGD:2317015 NCBI chrNW_004955532:648,845...650,020 JBrowse link
G Upk3b uroplakin 3B involved_in ISO (PMID:18776082) UniProt PMID:18776082 NCBI chrNW_004955456:15,073,833...15,078,635
Ensembl chrNW_004955456:15,073,841...15,078,635 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 ISO (PMID:19148554)
(PMID:22886301)
(PMID:22773844), (PMID:28977001)		 ARUK-UCL
MGI
BHF-UCL		 PMID:19148554 PMID:22773844 PMID:22886301 PMID:28977001 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:18259607) UniProt PMID:18259607 NCBI chrNW_004955422:20,840,055...20,843,182
Ensembl chrNW_004955422:20,840,055...20,843,225 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 ISO (PMID:23338840)
(PMID:22627278)		 CAFA
MGI		 PMID:22627278 PMID:23338840 NCBI chrNW_004955561:1,573,525...1,578,295
Ensembl chrNW_004955561:1,573,525...1,580,511 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26203154) ParkinsonsUK-UCL PMID:26203154 NCBI chrNW_004955448:207,582...240,264
Ensembl chrNW_004955448:204,991...240,160 		JBrowse link
G Wdr35 WD repeat domain 35 ISO Gch1
Bcl2, Bcl2l1		 RGD PMID:18671723 PMID:23289926 RGD:11553920 RGD:11553926 NCBI chrNW_004955469:2,484,972...2,546,562
Ensembl chrNW_004955469:2,482,353...2,546,578 		JBrowse link
G Wnt4 Wnt family member 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:15317892)
(PMID:11948913)		 UniProt
MGI		 PMID:11948913 PMID:15317892 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989 		JBrowse link
G Wnt8b Wnt family member 8B acts_upstream_of_or_within ISO (PMID:19890917) MGI PMID:19890917 NCBI chrNW_004955485:9,658,432...9,679,371
Ensembl chrNW_004955485:9,658,432...9,679,385 		JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in ISO (PMID:18776082) UniProt PMID:18776082 NCBI chrNW_004955484:6,853,820...6,967,261
Ensembl chrNW_004955484:6,851,307...6,967,261 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:29403552) CACAO PMID:29403552 NCBI chrNW_004955412:5,423,866...5,533,728
Ensembl chrNW_004955412:5,423,855...5,534,408 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:22065573) CACAO PMID:22065573 NCBI chrNW_004955438:21,341,374...21,377,674 JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in ISO (PMID:23776228) CACAO PMID:23776228 NCBI chrNW_004955427:14,409,700...15,231,495
Ensembl chrNW_004955427:14,409,700...14,453,926 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (PMID:23034280) MGI PMID:23034280 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:18178554) BHF-UCL PMID:18178554 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (PMID:16079796), (PMID:23117660) MGI PMID:16079796 PMID:23117660 NCBI chrNW_004955537:82,724...134,609
Ensembl chrNW_004955537:81,920...134,609 		JBrowse link
G Znf148 zinc finger protein 148 involved_in ISO (PMID:12771217) UniProt PMID:12771217 NCBI chrNW_004955427:24,294,926...24,430,697
Ensembl chrNW_004955427:24,294,926...24,377,217 		JBrowse link
G Znf281 zinc finger protein 281 involved_in ISO (PMID:12771217)
(PMID:10448078)		 UniProt PMID:10448078 PMID:12771217 NCBI chrNW_004955406:36,592,771...36,599,543
Ensembl chrNW_004955406:36,592,771...36,599,543 		JBrowse link
G Znf410 zinc finger protein 410 involved_in ISO (PMID:33301730) UniProt PMID:33301730 NCBI chrNW_004955523:1,479,042...1,509,889
Ensembl chrNW_004955523:1,475,908...1,514,465 		JBrowse link
G Znf503 zinc finger protein 503 involved_in ISO (PMID:20735826) UniProt PMID:20735826 NCBI chrNW_004955437:16,724,696...16,728,759
Ensembl chrNW_004955437:16,724,465...16,731,930 		JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:26489465) UniProt PMID:26489465 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319 		JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) CACAO PMID:28297718 NCBI chrNW_004955418:30,795...33,394
Ensembl chrNW_004955418:30,893...32,936 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO (PMID:28275056)
(PMID:16126846)		 CACAO
UniProt		 PMID:16126846 PMID:28275056 NCBI chrNW_004955495:3,183,083...3,194,356
Ensembl chrNW_004955495:3,183,179...3,193,376 		JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:24726324) UniProt PMID:24726324 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206 		JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in ISO (PMID:29180010)
(PMID:27616329)		 UniProt PMID:27616329 PMID:29180010 NCBI chrNW_004955486:9,736,801...9,744,659
Ensembl chrNW_004955486:9,737,365...9,744,111 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:26000482) UniProt PMID:26000482 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28335005) CACAO PMID:28335005 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) CACAO PMID:23125361 NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:24726324) UniProt PMID:24726324 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:19909337)
(PMID:19322177), (PMID:23185455), (PMID:26000482), (PMID:26134560)		 UniProt PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D involved_in ISO (PMID:26134560) UniProt PMID:26134560 NCBI chrNW_004955439:11,761,099...11,787,508
Ensembl chrNW_004955439:11,768,812...11,785,230 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15766526)
(PMID:17288565)
(PMID:22701344), (PMID:27193233)
(PMID:11719186), (PMID:15687258), (PMID:20221403), (PMID:27193233), (PMID:9703499)		 UniProt PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:12198173), (PMID:25014217), (PMID:25106868)
(PMID:20622884), (PMID:22701344), (PMID:24733888)
(PMID:24700863), (PMID:27102483)
(PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:26542173)		 UniProt PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:25106868)
(PMID:20622884), (PMID:22701344)		 UniProt PMID:20622884 PMID:22701344 PMID:25106868 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO (PMID:22547059) HGNC PMID:22547059 NCBI chrNW_004955406:4,589,849...4,606,380
Ensembl chrNW_004955406:4,589,849...4,606,380 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO (PMID:14517288), (PMID:26489465), (PMID:29180010)
(PMID:27616329)
(PMID:19029303)		 UniProt PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO (PMID:12034726) UniProt PMID:12034726 NCBI chrNW_004955464:8,699,142...8,847,289
Ensembl chrNW_004955464:8,699,088...8,788,878 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (PMID:12456657) UniProt PMID:12456657 NCBI chrNW_004955408:32,718,736...32,719,409 JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chrNW_004955550:1,949,975...2,002,297
Ensembl chrNW_004955550:1,949,975...2,002,297 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProt PMID:14517288 PMID:15014438 PMID:20932473 NCBI chrNW_004955406:42,231,858...42,276,477
Ensembl chrNW_004955406:42,231,858...42,276,477 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138 		JBrowse link
G Nicol1 NELL2 interacting cell ontogeny regulator 1 involved_in ISO (PMID:38625739) UniProt PMID:38625739 NCBI chrNW_004955514:1,200,732...1,201,730
Ensembl chrNW_004955514:1,200,721...1,213,789 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492 		JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO (PMID:19508861) MGI PMID:19508861 NCBI chrNW_004955516:904,852...934,313
Ensembl chrNW_004955516:904,062...934,313 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chrNW_004955445:2,036,314...2,050,882
Ensembl chrNW_004955445:2,036,124...2,052,139 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127)
(PMID:29844590)		 UniProt PMID:29844590 PMID:34160127 NCBI chrNW_004955443:6,940,523...7,100,130
Ensembl chrNW_004955443:6,940,523...7,100,130 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) BHF-UCL PMID:17481916 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chrNW_004955412:27,303,548...27,315,031
Ensembl chrNW_004955412:27,312,489...27,315,031 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:15014438) UniProt PMID:15014438 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
constitutive heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:28581500) UniProt PMID:28581500 NCBI chrNW_004955455:5,124,737...5,164,495
Ensembl chrNW_004955455:5,124,737...5,164,495 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO (PMID:28581500) UniProt PMID:28581500 NCBI chrNW_004955497:518,462...546,748 JBrowse link
G Pphln1 periphilin 1 involved_in ISO (PMID:28581500) UniProt PMID:28581500 NCBI chrNW_004955500:1,744,968...1,892,056
Ensembl chrNW_004955500:1,806,658...1,892,056 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (PMID:28581500) UniProt PMID:28581500 NCBI chrNW_004955430:6,440,655...6,480,956
Ensembl chrNW_004955430:6,442,084...6,480,802 		JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955435:18,009,228...18,050,329
Ensembl chrNW_004955435:18,008,352...18,050,329 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303), (PMID:29476152) UniProt PMID:19029303 PMID:29476152 NCBI chrNW_004955451:12,312,715...12,348,663
Ensembl chrNW_004955451:12,312,715...12,348,663 		JBrowse link
G Igf2bp2 insulin like growth factor 2 mRNA binding protein 2 involved_in ISO (PMID:29476152) UniProt PMID:29476152 NCBI chrNW_004955420:21,818,970...21,957,295
Ensembl chrNW_004955420:21,818,972...21,958,440 		JBrowse link
G Igf2bp3 insulin like growth factor 2 mRNA binding protein 3 involved_in ISO (PMID:29476152) UniProt PMID:29476152 NCBI chrNW_004955410:25,605,323...25,734,845
Ensembl chrNW_004955410:25,605,323...25,731,169 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955446:18,801,971...18,830,816
Ensembl chrNW_004955446:18,801,578...18,831,963 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:19029303)
(PMID:11051545), (PMID:19029303)		 UniProt
ComplexPortal		 PMID:11051545 PMID:19029303 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938 		JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708 		JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within		 ISO (PMID:31439799)
(PMID:18625844)		 UniProt
MGI		 PMID:18625844 PMID:31439799 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO (PMID:18625844) MGI PMID:18625844 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (PMID:18625844) MGI PMID:18625844 NCBI chrNW_004955497:7,500,478...7,646,541
Ensembl chrNW_004955497:7,500,748...7,647,255 		JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO (PMID:20584987), (PMID:20852261) UniProt PMID:20584987 PMID:20852261 NCBI chrNW_004955511:4,090,841...4,119,077
Ensembl chrNW_004955511:4,092,257...4,119,077 		JBrowse link
DNA methylation-dependent constitutive heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf7ip activating transcription factor 7 interacting protein involved_in ISO (PMID:27732843) UniProt PMID:27732843 NCBI chrNW_004955413:11,117,369...11,261,787
Ensembl chrNW_004955413:11,117,223...11,261,606 		JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain 2A involved_in ISO (PMID:12198165) ComplexPortal PMID:12198165 NCBI chrNW_004955458:4,149,610...4,186,647
Ensembl chrNW_004955458:4,151,886...4,170,641 		JBrowse link
G Bend3 BEN domain containing 3 involved_in ISO (PMID:26100909) UniProt PMID:26100909 NCBI chrNW_004955411:32,346,573...32,384,796
Ensembl chrNW_004955411:32,345,577...32,384,796 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO (PMID:24105743) MGI PMID:24105743 NCBI chrNW_004955429:6,548,586...6,553,730
Ensembl chrNW_004955429:6,547,731...6,558,105 		JBrowse link
G Ctcf CCCTC-binding factor acts_upstream_of_or_within ISO (PMID:24105743) MGI PMID:24105743 NCBI chrNW_004955484:9,041,226...9,092,924
Ensembl chrNW_004955484:9,042,524...9,064,927 		JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in ISO (PMID:10615135) UniProt PMID:10615135 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha involved_in
acts_upstream_of_or_within		 ISO (PMID:30478443)
(PMID:17938196)		 UniProt
MGI		 PMID:17938196 PMID:30478443 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:17938196) MGI PMID:17938196 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301 		JBrowse link
G Dnmt3l DNA methyltransferase 3 like involved_in ISO (PMID:24074865) UniProt PMID:24074865 NCBI chrNW_004955407:41,177,582...41,186,965
Ensembl chrNW_004955407:41,177,582...41,186,965 		JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (PMID:18818694) UniProt PMID:18818694 NCBI chrNW_004955513:5,491,446...5,642,559
Ensembl chrNW_004955513:5,547,313...5,641,499 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 involved_in ISO (PMID:18818694) UniProt PMID:18818694 NCBI chrNW_004955437:396,736...411,144
Ensembl chrNW_004955437:396,742...411,144 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:24105743) MGI PMID:24105743 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:23770133) BHF-UCL PMID:23770133 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864 		JBrowse link
G Hells helicase, lymphoid specific involved_in ISO (PMID:15647320) UniProt PMID:15647320 NCBI chrNW_004955507:995,389...1,034,852
Ensembl chrNW_004955507:990,429...1,034,852 		JBrowse link
G Kmt2b lysine methyltransferase 2B acts_upstream_of_or_within ISO (PMID:20808952) MGI PMID:20808952 NCBI chrNW_004955468:2,813,183...2,834,326
Ensembl chrNW_004955468:2,813,496...2,834,326 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO (PMID:23770133) BHF-UCL PMID:23770133 NCBI chrNW_004955402:38,761,668...38,829,830
Ensembl chrNW_004955402:38,767,419...38,830,204 		JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D involved_in ISO (PMID:24135283) UniProt PMID:24135283 NCBI chrNW_004955451:1,878,110...1,915,794
Ensembl chrNW_004955451:1,878,629...1,915,654 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (PMID:24623306), (PMID:27732843)
(PMID:20164836)		 UniProt PMID:20164836 PMID:24623306 PMID:27732843 NCBI chrNW_004955588:290,497...338,438
Ensembl chrNW_004955588:290,168...338,426 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:12198165) ComplexPortal PMID:12198165 NCBI chrNW_004955471:12,206,462...12,240,219
Ensembl chrNW_004955471:12,203,318...12,237,333 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within_positive_effect ISO (PMID:32381626) UniProt PMID:32381626 NCBI chrNW_004955463:7,296,204...7,360,935
Ensembl chrNW_004955463:7,298,030...7,360,971 		JBrowse link
G Trim28 tripartite motif containing 28 involved_in ISO (PMID:24623306)
(PMID:20164836)		 UniProt PMID:20164836 PMID:24623306 NCBI chrNW_004955584:1,148,903...1,156,001 JBrowse link
dosage compensation by inactivation of X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:20833368) UniProt PMID:20833368 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in ISO (PMID:23542155) UniProt PMID:23542155 NCBI chrNW_004955435:14,467,123...14,485,109
Ensembl chrNW_004955435:14,469,488...14,484,632 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004955435:13,846,297...13,854,639
Ensembl chrNW_004955435:13,846,297...13,854,639 		JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004955532:3,080,207...3,082,312 JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:23542155) UniProt PMID:23542155 NCBI chrNW_004955402:7,544,265...7,661,191
Ensembl chrNW_004955402:7,544,265...7,649,067 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004955447:4,474,920...4,505,359
Ensembl chrNW_004955447:4,476,004...4,504,913 		JBrowse link
facultative heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eed embryonic ectoderm development involved_in ISO (PMID:20064375), (PMID:20064376) GO_Central PMID:20064375 PMID:20064376 NCBI chrNW_004955414:6,659,144...6,685,530
Ensembl chrNW_004955414:6,659,055...6,685,530 		JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (PMID:19010785) GO_Central PMID:19010785 NCBI chrNW_004955513:5,491,446...5,642,559
Ensembl chrNW_004955513:5,547,313...5,641,499 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (PMID:20064376) GO_Central PMID:20064376 NCBI chrNW_004955451:16,548,898...16,563,449
Ensembl chrNW_004955451:16,548,858...16,564,310 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:20064375), (PMID:20064376) GO_Central PMID:20064375 PMID:20064376 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in ISO (PMID:19010785), (PMID:20064375), (PMID:20064376) GO_Central PMID:19010785 PMID:20064375 PMID:20064376 NCBI chrNW_004955590:383,810...512,854
Ensembl chrNW_004955590:384,817...626,684 		JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO (PMID:20064375) GO_Central PMID:20064375 NCBI chrNW_004955454:6,774,308...6,865,047
Ensembl chrNW_004955454:6,774,476...6,865,033 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit involved_in ISO (PMID:20064375), (PMID:20064376) GO_Central PMID:20064375 PMID:20064376 NCBI chrNW_004955481:6,867,175...6,917,548
Ensembl chrNW_004955481:6,867,175...6,917,548 		JBrowse link
gene silencing by piRNA-directed DNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:27856912) MGI PMID:27856912 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301 		JBrowse link
G Spocd1 SPOC domain containing 1 involved_in ISO (PMID:32674113) FlyBase PMID:32674113 NCBI chrNW_004955452:10,192,076...10,214,914 JBrowse link
global gene silencing by mRNA cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO (PMID:17495927) UniProt PMID:17495927 NCBI chrNW_004955511:2,588,825...2,592,108
Ensembl chrNW_004955511:2,588,825...2,593,192 		JBrowse link
G Dicer1 dicer 1, ribonuclease III involved_in ISO (PMID:15973356), (PMID:17452327) UniProt PMID:15973356 PMID:17452327 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:15973356) UniProt PMID:15973356 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806 		JBrowse link
heterochromatin boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trip12 thyroid hormone receptor interactor 12 involved_in ISO (PMID:22884692) UniProt PMID:22884692 NCBI chrNW_004955453:5,132,776...5,272,250
Ensembl chrNW_004955453:5,134,016...5,271,399 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:22884692) UniProt PMID:22884692 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005 		JBrowse link
heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bahd1 bromo adjacent homology domain containing 1 involved_in ISO (PMID:19666599) UniProt PMID:19666599 NCBI chrNW_004955416:7,376,794...7,388,577
Ensembl chrNW_004955416:7,361,847...7,388,647 		JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain 2A acts_upstream_of_or_within
involved_in		 ISO (PMID:20168299)
(PMID:16678107)		 MGI
ComplexPortal		 PMID:16678107 PMID:20168299 NCBI chrNW_004955458:4,149,610...4,186,647
Ensembl chrNW_004955458:4,151,886...4,170,641 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:23160044) MGI PMID:23160044 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Cbx3 chromobox 3 involved_in ISO (PMID:17540172) ComplexPortal PMID:17540172 NCBI chrNW_004955410:28,042,627...28,052,616
Ensembl chrNW_004955410:28,043,110...28,052,616 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within ISO (PMID:22516971) MGI PMID:22516971 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:22516971) MGI PMID:22516971 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (PMID:19026781) ARUK-UCL PMID:19026781 NCBI chrNW_004955451:16,548,898...16,563,449
Ensembl chrNW_004955451:16,548,858...16,564,310 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:19372552) BHF-UCL PMID:19372552 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707 		JBrowse link
G Hells helicase, lymphoid specific acts_upstream_of_or_within ISO (PMID:15448183) MGI PMID:15448183 NCBI chrNW_004955507:995,389...1,034,852
Ensembl chrNW_004955507:990,429...1,034,852 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:16901784) UniProt PMID:16901784 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:19158276) GO_Central PMID:19158276 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Kmt2d lysine methyltransferase 2D involved_in ISO (PMID:20808952) UniProt PMID:20808952 NCBI chrNW_004955500:7,850,782...7,891,703
Ensembl chrNW_004955500:7,853,292...7,886,067 		JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 involved_in ISO (PMID:17540172) ComplexPortal PMID:17540172 NCBI chrNW_004955445:13,621,007...13,645,809
Ensembl chrNW_004955445:13,621,791...13,645,799 		JBrowse link
G LOC102010789 histone H1.0 involved_in ISO (PMID:19158276) UniProt PMID:19158276 NCBI chrNW_004955413:24,182,547...24,184,588 JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:15608638) MGI PMID:15608638 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288 		JBrowse link
G Mis18a MIS18 kinetochore protein A acts_upstream_of_or_within ISO (PMID:22516971) MGI PMID:22516971 NCBI chrNW_004955407:31,799,537...31,813,897
Ensembl chrNW_004955407:31,798,924...31,813,862 		JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO (PMID:17540172) ComplexPortal PMID:17540172 NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chrNW_004955450:2,804,551...2,870,450
Ensembl chrNW_004955450:2,808,130...2,870,450 		JBrowse link
G Sirt1 sirtuin 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:15469825)
(PMID:23160044)		 BHF-UCL
MGI		 PMID:15469825 PMID:23160044 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:16678107) ComplexPortal PMID:16678107 NCBI chrNW_004955471:12,206,462...12,240,219
Ensembl chrNW_004955471:12,203,318...12,237,333 		JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO (PMID:26109053) GO_Central PMID:26109053 NCBI chrNW_004955414:33,255,048...33,272,861
Ensembl chrNW_004955414:33,256,850...33,272,556 		JBrowse link
G Tnp1 transition protein 1 involved_in ISO (PMID:11315969) UniProt PMID:11315969 NCBI chrNW_004955453:16,387,897...16,388,513
Ensembl chrNW_004955453:16,387,527...16,388,890 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (PMID:20080676) UniProt PMID:20080676 NCBI chrNW_004955437:8,678,212...8,780,700
Ensembl chrNW_004955437:8,677,801...8,782,120 		JBrowse link
G Uhrf1 ubiquitin like with PHD and ring finger domains 1 involved_in ISO (PMID:17967883) UniProt PMID:17967883 NCBI chrNW_004955495:4,153,898...4,154,611 JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16086026) UniProt PMID:16086026 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545 		JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955408:32,868,184...32,923,788
Ensembl chrNW_004955408:32,868,184...32,916,807 		JBrowse link
G Eri1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955463:5,074,921...5,104,341
Ensembl chrNW_004955463:5,075,105...5,102,892 		JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955454:2,732,308...2,734,398
Ensembl chrNW_004955454:2,732,308...2,734,398 		JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955463:13,775,639...13,788,784
Ensembl chrNW_004955463:13,773,869...13,788,784 		JBrowse link
G Mtpap mitochondrial poly(A) polymerase involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955429:21,768,011...21,792,481
Ensembl chrNW_004955429:21,767,547...21,794,885 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347 		JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955599:596,565...606,498
Ensembl chrNW_004955599:596,650...606,486 		JBrowse link
G Tut4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955464:6,610,350...6,734,606
Ensembl chrNW_004955464:6,646,245...6,734,066 		JBrowse link
G Tut7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955432:1,268,217...1,330,385
Ensembl chrNW_004955432:1,268,103...1,329,436 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:16086026) UniProt PMID:16086026 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chrNW_004955508:3,441,540...3,561,896
Ensembl chrNW_004955508:3,441,683...3,561,805 		JBrowse link
inactivation of paternal X chromosome by genomic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO (PMID:24268575) MGI PMID:24268575 NCBI chrNW_004955444:9,606,310...9,626,772
Ensembl chrNW_004955444:9,612,059...9,626,817 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 acts_upstream_of_or_within ISO (PMID:18425126), (PMID:23754746) MGI PMID:18425126 PMID:23754746 NCBI chrNW_004955402:7,544,265...7,661,191
Ensembl chrNW_004955402:7,544,265...7,649,067 		JBrowse link
inhibition of cysteine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cast calpastatin involved_in ISO (PMID:2407243) CAFA PMID:2407243 NCBI chrNW_004955418:15,859,951...15,974,141
Ensembl chrNW_004955418:15,862,729...15,916,169 		JBrowse link
G Cst7 cystatin F acts_upstream_of_or_within ISO (PMID:28251676) MGI PMID:28251676 NCBI chrNW_004955415:31,082,978...31,086,379
Ensembl chrNW_004955415:31,082,978...31,086,379 		JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO PMID:16639714 UniProt PMID:16639714 RGD:10047164 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in ISO (PMID:11865055) UniProt PMID:11865055 NCBI chrNW_004955473:10,823,795...10,878,256
Ensembl chrNW_004955473:10,827,435...10,840,604 		JBrowse link
lncRNA-mediated post-transcriptional gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO (PMID:22841487) FlyBase PMID:22841487 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283 		JBrowse link
maternal mRNA clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lsm14b LSM family member 14B involved_in ISO (PMID:37889087) UniProt PMID:37889087 NCBI chrNW_004955528:1,889,016...1,901,051
Ensembl chrNW_004955528:1,888,946...1,898,833 		JBrowse link
miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific acts_upstream_of_or_within ISO (PMID:23622242) MGI PMID:23622242 NCBI chrNW_004955545:1,078,319...1,106,938
Ensembl chrNW_004955545:1,078,319...1,106,938 		JBrowse link
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:22795694) BHF-UCL PMID:22795694 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:19966796), (PMID:23661684)
(PMID:20424607)		 BHF-UCL
MGI		 PMID:19966796 PMID:20424607 PMID:23661684 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:22795694) BHF-UCL PMID:22795694 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:22795694) BHF-UCL PMID:22795694 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
G Dicer1 dicer 1, ribonuclease III involved_in
acts_upstream_of_or_within		 ISO (PMID:23322395), (PMID:26435691)
(PMID:20463238), (PMID:20805985), (PMID:24209619)
(PMID:16462742)
(PMID:16040801)
(PMID:15713842)
(PMID:15973356), (PMID:23661684)		 ARUK-UCL
BHF-UCL
MGI
UniProt		 PMID:15713842 PMID:15973356 PMID:16040801 PMID:16462742 PMID:20463238 More... NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within_positive_effect ISO (PMID:31481660) MGI PMID:31481660 NCBI chrNW_004955426:21,997,208...22,057,205
Ensembl chrNW_004955426:21,997,208...22,057,205 		JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in ISO (PMID:23661684) BHF-UCL PMID:23661684 NCBI chrNW_004955403:18,394,609...18,410,381
Ensembl chrNW_004955403:18,373,375...18,410,627 		JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in ISO (PMID:28431233) UniProt PMID:28431233 NCBI chrNW_004955452:9,487,725...9,623,565
Ensembl chrNW_004955452:9,487,725...9,624,066 		JBrowse link
G Pum2 pumilio RNA binding family member 2 involved_in ISO (PMID:28431233) UniProt PMID:28431233 NCBI chrNW_004955469:2,810,825...2,886,911
Ensembl chrNW_004955469:2,810,573...2,886,611 		JBrowse link
G Rbm3 RNA binding motif protein 3 acts_upstream_of_or_within ISO (PMID:15684048) MGI PMID:15684048 NCBI chrNW_004955543:166,891...173,987
Ensembl chrNW_004955543:166,891...170,488 		JBrowse link
G Snip1 Smad nuclear interacting protein 1 involved_in ISO (PMID:18632581) UniProt PMID:18632581 NCBI chrNW_004955452:15,352,080...15,365,545
Ensembl chrNW_004955452:15,353,182...15,365,459 		JBrowse link
G Spout1 SPOUT domain containing methyltransferase 1 involved_in ISO (PMID:28431233) UniProt PMID:28431233 NCBI chrNW_004955570:1,202,987...1,211,052
Ensembl chrNW_004955570:1,204,040...1,211,020 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:15973356), (PMID:23661684) UniProt PMID:15973356 PMID:23661684 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:28431233) UniProt PMID:28431233 NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432 		JBrowse link
G Zc3h7a zinc finger CCCH-type containing 7A involved_in ISO (PMID:28431233) UniProt PMID:28431233 NCBI chrNW_004955442:6,847,224...6,884,537
Ensembl chrNW_004955442:6,853,936...6,886,079 		JBrowse link
G Zc3h7b zinc finger CCCH-type containing 7B involved_in ISO (PMID:28431233) UniProt PMID:28431233 NCBI chrNW_004955413:26,907,883...26,951,352
Ensembl chrNW_004955413:26,925,943...26,951,040 		JBrowse link
miRNA-mediated gene silencing by inhibition of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:18771919)
(PMID:17671087), (PMID:19801630), (PMID:23409027)		 UniProt PMID:17671087 PMID:18771919 PMID:19801630 PMID:23409027 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
G Ajuba ajuba LIM protein involved_in ISO (PMID:20616046) UniProt PMID:20616046 NCBI chrNW_004955409:37,318,597...37,329,068
Ensembl chrNW_004955409:37,318,597...37,329,155 		JBrowse link
G Ddx6 DEAD-box helicase 6 acts_upstream_of_positive_effect ISO (PMID:27342281) UniProt PMID:27342281 NCBI chrNW_004955412:19,854,785...19,889,422
Ensembl chrNW_004955412:19,854,785...19,889,426 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 acts_upstream_of_positive_effect ISO (PMID:28487484) UniProt PMID:28487484 NCBI chrNW_004955453:3,395,483...3,424,649
Ensembl chrNW_004955453:3,395,483...3,424,649 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 acts_upstream_of_positive_effect ISO (PMID:24335285), (PMID:27342281), (PMID:28487484), (PMID:32354837) UniProt PMID:24335285 PMID:27342281 PMID:28487484 PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104 		JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO (PMID:23409027) ParkinsonsUK-UCL PMID:23409027 NCBI chrNW_004955420:23,161,541...23,179,788
Ensembl chrNW_004955420:23,161,078...23,180,568 		JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO (PMID:17507929) UniProt PMID:17507929 NCBI chrNW_004956210:226...6,819
Ensembl chrNW_004956210:21...9,816 		JBrowse link
G Limd1 LIM domain containing 1 involved_in ISO (PMID:20616046) UniProt PMID:20616046 NCBI chrNW_004955420:26,290,792...26,328,637
Ensembl chrNW_004955420:26,291,529...26,328,637 		JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A involved_in ISO (PMID:17671087) UniProt PMID:17671087 NCBI chrNW_004955493:3,057,035...3,243,668
Ensembl chrNW_004955493:3,090,088...3,243,731 		JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B acts_upstream_of_positive_effect ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004955413:25,820,428...26,060,681
Ensembl chrNW_004955413:25,886,077...26,048,546 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:22735451) UniProt PMID:22735451 NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432 		JBrowse link
G Wtip WT1 interacting protein involved_in ISO (PMID:20616046) UniProt PMID:20616046 NCBI chrNW_004955468:4,082,681...4,106,265
Ensembl chrNW_004955468:4,082,681...4,106,265 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:21278420) UniProt PMID:21278420 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:18771919)
(PMID:16357216)
(PMID:15260970), (PMID:17524464)		 UniProt
BHF-UCL		 PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
G Cnot6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chrNW_004955408:170,399...239,492
Ensembl chrNW_004955408:170,399...218,040 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Cnot8 CCR4-NOT transcription complex subunit 8 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chrNW_004955408:9,112,208...9,132,650
Ensembl chrNW_004955408:9,112,208...9,132,758 		JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:16289642) UniProt PMID:16289642 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206 		JBrowse link
miRNA-mediated post-transcriptional gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO (PMID:20616046) MGI PMID:20616046 NCBI chrNW_004955409:37,318,597...37,329,068
Ensembl chrNW_004955409:37,318,597...37,329,155 		JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:23172285), (PMID:24768540) BHF-UCL PMID:23172285 PMID:24768540 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:17531811) UniProt PMID:17531811 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011 		JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO (PMID:17507929) UniProt PMID:17507929 NCBI chrNW_004956210:226...6,819
Ensembl chrNW_004956210:21...9,816 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within_positive_effect ISO (PMID:20159450) UniProt PMID:20159450 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Limd1 LIM domain containing 1 acts_upstream_of_or_within ISO (PMID:20616046) MGI PMID:20616046 NCBI chrNW_004955420:26,290,792...26,328,637
Ensembl chrNW_004955420:26,291,529...26,328,637 		JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:17507929) UniProt PMID:17507929 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206 		JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A involved_in ISO (PMID:23172285) BHF-UCL PMID:23172285 NCBI chrNW_004955493:3,057,035...3,243,668
Ensembl chrNW_004955493:3,090,088...3,243,731 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:23172285) BHF-UCL PMID:23172285 NCBI chrNW_004955506:4,440,555...4,579,642
Ensembl chrNW_004955506:4,440,555...4,559,070 		JBrowse link
G Wtip WT1 interacting protein acts_upstream_of_or_within ISO (PMID:20616046) MGI PMID:20616046 NCBI chrNW_004955468:4,082,681...4,106,265
Ensembl chrNW_004955468:4,082,681...4,106,265 		JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:21245038), (PMID:21666256) UniProt PMID:21245038 PMID:21666256 NCBI chrNW_004955430:7,272,911...7,277,726
Ensembl chrNW_004955430:7,272,765...7,277,726 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:20691904) UniProt PMID:20691904 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992 		JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chrNW_004955437:21,880,778...21,905,540
Ensembl chrNW_004955437:21,877,666...21,906,362 		JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chrNW_004955437:21,880,778...21,905,540
Ensembl chrNW_004955437:21,877,666...21,906,362 		JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:21070968) UniProt PMID:21070968 NCBI chrNW_004955408:32,868,184...32,923,788
Ensembl chrNW_004955408:32,868,184...32,916,807 		JBrowse link
G Dxo decapping exoribonuclease involved_in ISO (PMID:29601584)
(PMID:28283058)
(PMID:23523372)		 UniProt PMID:23523372 PMID:28283058 PMID:29601584 NCBI chrNW_004955437:482,866...484,989
Ensembl chrNW_004955437:481,554...484,989 		JBrowse link
G Exosc3 exosome component 3 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004955419:28,683,896...28,692,006
Ensembl chrNW_004955419:28,683,896...28,693,395 		JBrowse link
G Exosc5 exosome component 5 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004955555:328,130...334,106
Ensembl chrNW_004955555:326,698...334,106 		JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004955428:18,732,733...18,743,743
Ensembl chrNW_004955428:18,731,919...18,743,756 		JBrowse link
G Khsrp KH-type splicing regulatory protein acts_upstream_of_or_within ISO (PMID:22844247) MGI PMID:22844247 NCBI chrNW_004955495:3,183,083...3,194,356
Ensembl chrNW_004955495:3,183,179...3,193,376 		JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chrNW_004955437:321,367...325,556
Ensembl chrNW_004955437:320,768...325,810 		JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chrNW_004955617:42,829...47,999
Ensembl chrNW_004955617:42,447...47,999 		JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chrNW_004955428:1,931,684...1,944,445
Ensembl chrNW_004955428:1,930,937...1,946,246 		JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:29262316) UniProt PMID:29262316 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28637692) UniProt PMID:28637692 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:20133598) UniProt PMID:20133598 NCBI chrNW_004955574:333,007...333,529
Ensembl chrNW_004955574:333,116...333,529 		JBrowse link
G Nudt12 nudix hydrolase 12 involved_in ISO (PMID:31101919) UniProt PMID:31101919 NCBI chrNW_004955418:10,459,644...10,474,124
Ensembl chrNW_004955418:10,459,638...10,474,124 		JBrowse link
G Nudt16 nudix hydrolase 16 involved_in ISO (PMID:21070968), (PMID:21337011) UniProt PMID:21070968 PMID:21337011 NCBI chrNW_004955501:7,083,068...7,085,505 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:12721301), (PMID:16055741) UniProt PMID:12721301 PMID:16055741 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chrNW_004955417:13,810,596...13,822,982
Ensembl chrNW_004955417:13,810,596...13,822,982 		JBrowse link
G Slfn14 schlafen family member 14 involved_in ISO (PMID:25996083) UniProt PMID:25996083 NCBI chrNW_004955481:10,037,941...10,046,549
Ensembl chrNW_004955481:10,037,941...10,046,549 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:27558897), (PMID:30559377), (PMID:30930054)
(PMID:29855337), (PMID:30065315), (PMID:30150673)		 UniProt PMID:27558897 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 More... NCBI chrNW_004955452:7,783,398...7,815,468 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:26000482) UniProt PMID:26000482 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D acts_upstream_of_or_within ISO (PMID:24415781) MGI PMID:24415781 NCBI chrNW_004955439:11,761,099...11,787,508
Ensembl chrNW_004955439:11,768,812...11,785,230 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 ISO (PMID:10330172), (PMID:20221403)
(PMID:10751406), (PMID:11782475)		 UniProt
MGI		 PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within ISO PMID:10751406 MGI PMID:10751406 RGD:1580602 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:34611029)
(PMID:22367205)		 UniProt PMID:22367205 PMID:34611029 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within ISO (PMID:1370712) MGI PMID:1370712 NCBI chrNW_004955540:1,805,648...1,890,409
Ensembl chrNW_004955540:1,805,666...1,890,409 		JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase involved_in ISO (PMID:34048572), (PMID:37257451)
(PMID:36859428)		 UniProt PMID:34048572 PMID:36859428 PMID:37257451 NCBI chrNW_004955478:11,104,445...11,128,980
Ensembl chrNW_004955478:11,105,920...11,128,222 		JBrowse link
G Celf1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chrNW_004955422:742,017...817,649
Ensembl chrNW_004955422:742,017...817,647 		JBrowse link
G Cnot6l CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (PMID:17452450) MGI PMID:17452450 NCBI chrNW_004955433:2,206,462...2,290,773
Ensembl chrNW_004955433:2,213,444...2,316,049 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO RGD PMID:26682942 RGD:329961560 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283 		JBrowse link
G Fto FTO alpha-ketoglutarate dependent dioxygenase involved_in ISO (PMID:28002401), (PMID:30197295) UniProt PMID:28002401 PMID:30197295 NCBI chrNW_004955433:11,424,069...11,834,955
Ensembl chrNW_004955433:11,424,176...11,813,771 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:30067974) UniProt PMID:30067974 NCBI chrNW_004955420:9,903,736...9,966,100
Ensembl chrNW_004955420:9,903,736...9,966,100 		JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in ISO (PMID:21658585) UniProt PMID:21658585 NCBI chrNW_004955467:9,312,548...9,332,674
Ensembl chrNW_004955467:9,312,548...9,332,674 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chrNW_004955453:3,201,593...3,301,541
Ensembl chrNW_004955453:3,203,358...3,301,547 		JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955452:3,318,536...3,354,725
Ensembl chrNW_004955452:3,315,133...3,355,508 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:24394384), (PMID:28965759) UniProt PMID:24394384 PMID:28965759 NCBI chrNW_004955428:21,475,981...21,507,730
Ensembl chrNW_004955428:21,475,981...21,507,730 		JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:29262316) UniProt PMID:29262316 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:24394384), (PMID:25456834), (PMID:25569111), (PMID:28637692), (PMID:28792938), (PMID:28965759) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955431:23,538,224...23,540,039
Ensembl chrNW_004955431:23,538,242...23,539,051 		JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955574:333,007...333,529
Ensembl chrNW_004955574:333,116...333,529 		JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955415:32,648,455...32,651,909
Ensembl chrNW_004955415:32,649,054...32,651,936 		JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in ISO (PMID:25768905) UniProt PMID:25768905 NCBI chrNW_004955452:9,487,725...9,623,565
Ensembl chrNW_004955452:9,487,725...9,624,066 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chrNW_004955417:13,810,596...13,822,982
Ensembl chrNW_004955417:13,810,596...13,822,982 		JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:29353861) ARUK-UCL PMID:29353861 NCBI chrNW_004955402:9,752,101...9,864,317
Ensembl chrNW_004955402:9,750,730...9,864,317 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:29353861) ARUK-UCL PMID:29353861 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401 		JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:32492408)
(PMID:32943573)		 UniProt PMID:32492408 PMID:32943573 NCBI chrNW_004955528:935,182...951,722
Ensembl chrNW_004955528:935,182...951,722 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:27558897), (PMID:30559377), (PMID:30930054), (PMID:32492408)
(PMID:29855337), (PMID:30065315), (PMID:30150673), (PMID:31959747), (PMID:32943573)
(PMID:28106072), (PMID:32169943)		 UniProt PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 More... NCBI chrNW_004955452:7,783,398...7,815,468 JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO (PMID:32492408)
(PMID:32943573)
(PMID:28106072)		 UniProt PMID:28106072 PMID:32492408 PMID:32943573 NCBI chrNW_004955444:15,758,596...15,789,979
Ensembl chrNW_004955444:15,758,596...15,789,979 		JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (PMID:15480992) MGI PMID:15480992 NCBI chrNW_004955413:6,471,933...6,480,475
Ensembl chrNW_004955413:6,471,953...6,480,469 		JBrowse link
G Axin2 axin 2 involved_in ISO (PMID:17072303) BHF-UCL PMID:17072303 NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538 NCBI chrNW_004955495:6,634,389...6,640,800
Ensembl chrNW_004955495:6,634,394...6,640,800 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:22844247) MGI PMID:22844247 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO (PMID:15766563) BHF-UCL PMID:15766563 NCBI chrNW_004955422:27,638,625...27,643,261
Ensembl chrNW_004955422:27,633,827...27,642,241 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:24335285), (PMID:32354837) UniProt PMID:24335285 PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19029303)
(PMID:24394384)
(PMID:27609837)
(PMID:14976220), (PMID:21613615)
(PMID:21613615)
(PMID:31358969)		 UniProt
CACAO
MGI		 PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 More... NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283 		JBrowse link
G Fam76b family with sequence similarity 76 member B involved_in ISO (PMID:38421448) UniProt PMID:38421448 NCBI chrNW_004955412:617,089...664,452
Ensembl chrNW_004955412:644,379...665,017 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO (PMID:12358785) BHF-UCL PMID:12358785 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) UniProt PMID:17174306 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (PMID:21822257) MGI PMID:21822257 NCBI chrNW_004955406:42,056,014...42,077,701
Ensembl chrNW_004955406:42,056,014...42,077,701 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) UniProt PMID:25940091 PMID:28673543 NCBI chrNW_004955408:9,002,443...9,080,938
Ensembl chrNW_004955408:9,002,458...9,080,938 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO (PMID:11741878) MGI PMID:11741878 NCBI chrNW_004955406:42,231,858...42,276,477
Ensembl chrNW_004955406:42,231,858...42,276,477 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO (PMID:26742488) UniProt PMID:26742488 NCBI chrNW_004955451:17,534,644...17,547,095
Ensembl chrNW_004955451:17,534,659...17,545,584 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:29290617) ARUK-UCL PMID:29290617 NCBI chrNW_004955428:21,475,981...21,507,730
Ensembl chrNW_004955428:21,475,981...21,507,730 		JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Noct nocturnin involved_in ISO (PMID:22073225) UniProt PMID:22073225 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) UniProt PMID:30842217 NCBI chrNW_004955438:12,726,206...12,780,364
Ensembl chrNW_004955438:12,726,357...12,780,379 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:32732889) RGD
UniProt		 PMID:16855020 PMID:32732889 RGD:10045995 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727 		JBrowse link
G Rbm10 RNA binding motif protein 10 ISO RGD PMID:19508861 RGD:151667451 NCBI chrNW_004955516:904,852...934,313
Ensembl chrNW_004955516:904,062...934,313 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (PMID:25397698) MGI PMID:25397698 NCBI chrNW_004955471:12,096,400...12,167,536 JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within ISO (PMID:27956496) MGI PMID:27956496 NCBI chrNW_004955515:2,697,370...2,729,425
Ensembl chrNW_004955515:2,698,075...2,730,074 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO (PMID:9009318) MGI PMID:9009318 NCBI chrNW_004955453:14,980,562...14,995,118
Ensembl chrNW_004955453:14,980,562...14,995,608 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:21822258) MGI PMID:21822258 NCBI chrNW_004955451:4,992,634...4,996,619
Ensembl chrNW_004955451:4,992,634...4,999,029 		JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chrNW_004955481:10,242,839...10,274,961
Ensembl chrNW_004955481:10,252,393...10,274,860 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in ISO (PMID:28931820) UniProt PMID:28931820 NCBI chrNW_004955435:20,790,410...20,811,730
Ensembl chrNW_004955435:20,792,773...20,811,723 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:18794151) UniProt PMID:18794151 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886 		JBrowse link
G Traf2 TNF receptor associated factor 2 involved_in ISO (PMID:21822258) MGI PMID:21822258 NCBI chrNW_004955513:4,964,692...4,984,359
Ensembl chrNW_004955513:4,967,984...4,983,987 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:17785852)
(PMID:21822258)		 MGI PMID:17785852 PMID:21822258 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
G Traf5 TNF receptor associated factor 5 involved_in ISO (PMID:21822258) MGI PMID:21822258 NCBI chrNW_004955489:935,601...995,162
Ensembl chrNW_004955489:949,890...995,162 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:31358969) UniProt PMID:31358969 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708 		JBrowse link
G Ybx2 Y-box binding protein 2 acts_upstream_of_or_within ISO (PMID:17035640) MGI PMID:17035640 NCBI chrNW_004955467:9,624,506...9,629,904
Ensembl chrNW_004955467:9,624,019...9,629,904 		JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:28525753) UniProt PMID:28525753 NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:31868295) UniProt PMID:31868295 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727 		JBrowse link
negative regulation of chemokine (C-C motif) ligand 4 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO (PMID:27074721) UniProt PMID:27074721 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
negative regulation of chemokine (C-C motif) ligand 5 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO (PMID:27074721) UniProt PMID:27074721 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G LOC102006100 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:19412184) UniProt PMID:19412184 NCBI chrNW_004955408:35,342,733...35,382,821
Ensembl chrNW_004955408:35,374,508...35,382,314 		JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO (PMID:23399697) UniProt PMID:23399697 NCBI chrNW_004955452:1,059,168...1,066,096
Ensembl chrNW_004955452:1,058,930...1,066,096 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004955482:9,339,174...9,359,266 JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (PMID:17954568) ARUK-UCL PMID:17954568 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in ISO (PMID:19412184) UniProt PMID:19412184 NCBI chrNW_004955411:31,010,373...31,042,321 JBrowse link
negative regulation of chemokine (C-X-C motif) ligand 2 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf4 KLF transcription factor 4 involved_in ISO (PMID:20551324) BHF-UCL PMID:20551324 NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174 		JBrowse link
G Map2k5 mitogen-activated protein kinase kinase 5 involved_in ISO PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chrNW_004955450:8,207,577...8,458,258
Ensembl chrNW_004955450:8,203,569...8,458,258 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004955482:9,339,174...9,359,266 JBrowse link
negative regulation of chemokine (C-X-C motif) ligand 9 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004955482:9,339,174...9,359,266 JBrowse link
negative regulation of chemokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 EPH receptor A2 acts_upstream_of_or_within ISO (PMID:19443703) MGI PMID:19443703 NCBI chrNW_004955527:2,120,447...2,151,932
Ensembl chrNW_004955527:2,120,266...2,152,781 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:19865078) UniProt PMID:19865078 NCBI chrNW_004955425:24,050,901...24,054,039 JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (PMID:12925700) MGI PMID:12925700 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25754930) UniProt PMID:25754930 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G LOC102018844 neutrophil elastase involved_in ISO (PMID:12223522) UniProt PMID:12223522 NCBI chrNW_004955495:6,964,577...6,967,208
Ensembl chrNW_004955495:6,964,667...6,967,106 		JBrowse link
G Sigirr single Ig and TIR domain containing involved_in ISO (PMID:12925853) HGNC-UCL PMID:12925853 NCBI chrNW_004955476:11,603,375...11,610,606
Ensembl chrNW_004955476:11,603,381...11,610,571 		JBrowse link
G Slc37a4 solute carrier family 37 member 4 acts_upstream_of_or_within ISO (PMID:16891306) MGI PMID:16891306 NCBI chrNW_004955412:20,133,652...20,140,134
Ensembl chrNW_004955412:20,133,652...20,139,542 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit ISO RGD PMID:23192652 RGD:9586745 NCBI chrNW_004955481:6,867,175...6,917,548
Ensembl chrNW_004955481:6,867,175...6,917,548 		JBrowse link
negative regulation of connective tissue growth factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:16550171), (PMID:26376865) ARUK-UCL PMID:16550171 PMID:26376865 NCBI chrNW_004955445:10,708,147...10,722,109
Ensembl chrNW_004955445:10,709,681...10,722,264 		JBrowse link
negative regulation of cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 involved_in ISO (PMID:28827723) UniProt PMID:28827723 NCBI chrNW_004955405:26,872,379...26,932,270
Ensembl chrNW_004955405:26,872,379...26,932,703 		JBrowse link
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:23878224) MGI PMID:23878224 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Btk Bruton tyrosine kinase involved_in ISO (PMID:23544144) CACAO PMID:23544144 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120 		JBrowse link
G Casp3 caspase 3 involved_in ISO (PMID:36002459) FlyBase PMID:36002459 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:17081782) MGI PMID:17081782 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Cidea cell death inducing DFFA like effector a involved_in ISO (PMID:15919794) BHF-UCL PMID:15919794 NCBI chrNW_004955402:1,090,372...1,096,621
Ensembl chrNW_004955402:1,090,518...1,096,569 		JBrowse link
G Cryba1 crystallin beta A1 ISO RGD PMID:21993393 RGD:10059647 NCBI chrNW_004955481:3,952,976...3,986,548
Ensembl chrNW_004955481:3,952,988...3,959,764 		JBrowse link
G Epha2 EPH receptor A2 acts_upstream_of_or_within ISO (PMID:19443703) MGI PMID:19443703 NCBI chrNW_004955527:2,120,447...2,151,932
Ensembl chrNW_004955527:2,120,266...2,152,781 		JBrowse link
G Ffar4 free fatty acid receptor 4 acts_upstream_of_or_within
involved_in		 ISO (PMID:26828067)
(PMID:20813258)		 MGI
UniProt		 PMID:20813258 PMID:26828067 NCBI chrNW_004955507:81,910...110,047
Ensembl chrNW_004955507:81,284...110,047 		JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:11483607) UniProt PMID:11483607 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Gpnmb glycoprotein nmb involved_in ISO (PMID:19350579) ParkinsonsUK-UCL PMID:19350579 NCBI chrNW_004955410:25,554,279...25,583,368
Ensembl chrNW_004955410:25,553,973...25,582,500 		JBrowse link
G Hdac9 histone deacetylase 9 involved_in ISO (PMID:28855441) ARUK-UCL PMID:28855441 NCBI chrNW_004955410:21,046,312...21,932,029
Ensembl chrNW_004955410:21,245,562...21,932,023 		JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:1940799) RGD
UniProt		 PMID:1940799 PMID:8484757 RGD:729048 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (PMID:23589304) UniProt PMID:23589304 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264 		JBrowse link
G Lrrc32 leucine rich repeat containing 32 acts_upstream_of_or_within ISO (PMID:18628982) MGI PMID:18628982 NCBI chrNW_004955414:15,296,704...15,309,088
Ensembl chrNW_004955414:15,296,563...15,309,088 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within ISO (PMID:23878224) MGI PMID:23878224 NCBI chrNW_004955470:2,065,468...2,167,909
Ensembl chrNW_004955470:2,065,411...2,167,909 		JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (PMID:32971525) UniProt PMID:32971525 NCBI chrNW_004955474:6,796,068...6,814,906
Ensembl chrNW_004955474:6,796,066...6,814,906 		JBrowse link
G Ndrg2 NDRG family member 2 acts_upstream_of_or_within ISO (PMID:19815093) MGI PMID:19815093 NCBI chrNW_004955550:1,771,514...1,778,693
Ensembl chrNW_004955550:1,767,911...1,780,635 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:18566389) BHF-UCL PMID:18566389 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885 		JBrowse link
G Nlrp12 NLR family pyrin domain containing 12 involved_in ISO (PMID:16203735) HGNC-UCL PMID:16203735 NCBI chrNW_004955604:317,987...331,051 JBrowse link
G Nptn neuroplastin involved_in ISO (PMID:28827723) UniProt PMID:28827723 NCBI chrNW_004955450:3,938,403...4,002,694
Ensembl chrNW_004955450:3,938,403...4,004,059 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:18566389) BHF-UCL PMID:18566389 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387 		JBrowse link
G Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 involved_in ISO (PMID:27805901) UniProt PMID:27805901 NCBI chrNW_004955583:198,233...201,312
Ensembl chrNW_004955583:198,233...202,486 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in ISO (PMID:11602631) UniProt PMID:11602631 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822 		JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19162005) BHF-UCL PMID:19162005 NCBI chrNW_004955518:4,788,857...4,800,273
Ensembl chrNW_004955518:4,788,656...4,801,204 		JBrowse link
G Rnf128 ring finger protein 128 acts_upstream_of_or_within ISO (PMID:12705856) MGI PMID:12705856 NCBI chrNW_004955490:9,288,482...9,309,571
Ensembl chrNW_004955490:9,287,876...9,309,641 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO (PMID:16470178) MGI PMID:16470178 NCBI chrNW_004955453:14,980,562...14,995,118
Ensembl chrNW_004955453:14,980,562...14,995,608 		JBrowse link
G Srgn serglycin involved_in ISO (PMID:16807245) UniProt PMID:16807245 NCBI chrNW_004955437:21,954,837...21,966,552
Ensembl chrNW_004955437:21,951,732...21,965,581 		JBrowse link
G Syt11 synaptotagmin 11 involved_in ISO (PMID:28686317) UniProt PMID:28686317 NCBI chrNW_004955545:2,054,720...2,074,526
Ensembl chrNW_004955545:2,054,721...2,074,526 		JBrowse link
G Tia1 TIA1 cytotoxic granule associated RNA binding protein acts_upstream_of_or_within ISO (PMID:10921895) MGI PMID:10921895 NCBI chrNW_004955424:14,887,722...14,920,844
Ensembl chrNW_004955424:14,887,659...14,921,588 		JBrowse link
G Tnfrsf4 TNF receptor superfamily member 4 acts_upstream_of_or_within ISO (PMID:14635034) MGI PMID:14635034 NCBI chrNW_004955486:9,565,424...9,569,836
Ensembl chrNW_004955486:9,567,220...9,569,676 		JBrowse link
G Tnfsf4 TNF superfamily member 4 acts_upstream_of_or_within ISO (PMID:14635034) MGI PMID:14635034 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 involved_in ISO (PMID:17164348) BHF-UCL PMID:17164348 NCBI chrNW_004955402:2,652,020...2,685,350
Ensembl chrNW_004955402:2,652,020...2,686,117 		JBrowse link
negative regulation of cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 acts_upstream_of_or_within ISO (PMID:20060382) MGI PMID:20060382 NCBI chrNW_004955417:30,199,508...30,386,695
Ensembl chrNW_004955417:30,198,842...30,386,266 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO (PMID:12458630) BHF-UCL PMID:12458630 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:12458630) BHF-UCL PMID:12458630 NCBI chrNW_004955468:12,977,956...12,979,282
Ensembl chrNW_004955468:12,977,956...12,979,753 		JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:10443688) BHF-UCL PMID:10443688 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10443688) BHF-UCL PMID:10443688 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
negative regulation of cytokine production involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:18723473) UniProt PMID:18723473 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:18723473) UniProt PMID:18723473 NCBI chrNW_004955505:717,800...769,702
Ensembl chrNW_004955505:721,222...798,470 		JBrowse link
G Adcy7 adenylate cyclase 7 involved_in ISO (PMID:20505140) UniProt PMID:20505140 NCBI chrNW_004955433:8,362,957...8,428,773
Ensembl chrNW_004955433:8,362,756...8,426,997 		JBrowse link
G Apod apolipoprotein D involved_in ISO (PMID:18842892) UniProt PMID:18842892 NCBI chrNW_004955420:13,553,254...13,570,357
Ensembl chrNW_004955420:13,553,058...13,573,690 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (PMID:25328665) UniProt PMID:25328665 NCBI chrNW_004955405:39,503,020...39,540,069
Ensembl chrNW_004955405:39,503,020...39,540,335 		JBrowse link
G Chid1 chitinase domain containing 1 involved_in ISO (PMID:20724479) UniProt PMID:20724479 NCBI chrNW_004955476:11,246,745...11,276,341
Ensembl chrNW_004955476:11,246,490...11,276,341 		JBrowse link
G Cuedc2 CUE domain containing 2 acts_upstream_of_or_within ISO (PMID:24882011) MGI PMID:24882011 NCBI chrNW_004955485:7,969,389...7,977,073
Ensembl chrNW_004955485:7,975,190...7,976,875 		JBrowse link
G Ephb2 EPH receptor B2 ISO RGD PMID:33722292 RGD:127285641 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445 		JBrowse link
G Extl3 exostosin like glycosyltransferase 3 involved_in ISO (PMID:28811323) UniProt PMID:28811323 NCBI chrNW_004955403:51,076,323...51,102,435
Ensembl chrNW_004955403:51,076,319...51,102,435 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:27690696 RGD:126781724 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chrNW_004955422:1,356,675...1,367,788
Ensembl chrNW_004955422:1,356,769...1,367,517 		JBrowse link
G Il1r2 interleukin 1 receptor type 2 acts_upstream_of_or_within ISO (PMID:23395675) MGI PMID:23395675 NCBI chrNW_004955470:7,518,565...7,562,219
Ensembl chrNW_004955470:7,518,663...7,559,470 		JBrowse link
G Macir macrophage immunometabolism regulator acts_upstream_of_or_within ISO (PMID:26316022) MGI PMID:26316022 NCBI chrNW_004955418:10,752,250...10,767,791
Ensembl chrNW_004955418:10,752,250...10,767,791 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chrNW_004955442:14,068,436...14,093,889
Ensembl chrNW_004955442:14,068,348...14,094,016 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:24560620) UniProt PMID:24560620 NCBI chrNW_004955442:13,795,322...13,834,362
Ensembl chrNW_004955442:13,814,434...13,833,222 		JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (PMID:17114484), (PMID:19946272) BHF-UCL PMID:17114484 PMID:19946272 NCBI chrNW_004955485:530,642...553,508
Ensembl chrNW_004955485:529,860...553,601 		JBrowse link
G Pla2g10 phospholipase A2 group X acts_upstream_of_or_within ISO (PMID:26828067) MGI PMID:26828067 NCBI chrNW_004955442:4,208,497...4,225,893
Ensembl chrNW_004955442:4,208,575...4,225,834 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (PMID:23562609)
(PMID:17954568)		 ARUK-UCL PMID:17954568 PMID:23562609 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
G Spink7 serine peptidase inhibitor Kazal type 7 acts_upstream_of_or_within ISO (PMID:33722746) MGI PMID:33722746 NCBI chrNW_004955415:5,954,880...5,958,319
Ensembl chrNW_004955415:5,940,965...5,961,505 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29887864) ARUK-UCL PMID:29887864 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:21616078) UniProt PMID:21616078 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
negative regulation of cytoplasmic translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in ISO (PMID:26863196) UniProt PMID:26863196 NCBI chrNW_004955422:3,660,504...3,695,352
Ensembl chrNW_004955422:3,657,765...3,695,409 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (PMID:18752464) UniProt PMID:18752464 NCBI chrNW_004955416:13,963,300...14,038,691
Ensembl chrNW_004955416:13,981,657...14,039,705 		JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISO (PMID:18752464) UniProt PMID:18752464 NCBI chrNW_004955480:8,853,449...8,906,859 JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:11376146) UniProt PMID:11376146 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 involved_in ISO (PMID:34314702) UniProt PMID:34314702 NCBI chrNW_004955406:22,077,247...22,274,668
Ensembl chrNW_004955406:22,076,343...22,227,200 		JBrowse link
G Parp16 poly(ADP-ribose) polymerase family member 16 involved_in ISO (PMID:34314702) UniProt PMID:34314702 NCBI chrNW_004955450:10,157,731...10,177,939
Ensembl chrNW_004955450:10,157,731...10,178,803 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29358667) UniProt PMID:29358667 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Unk unk zinc finger involved_in ISO (PMID:25737280) GO_Central PMID:25737280 NCBI chrNW_004955506:6,424,638...6,470,406
Ensembl chrNW_004955506:6,424,638...6,470,874 		JBrowse link
negative regulation of cytoplasmic translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISO PMID:22157746 UniProt PMID:22157746 RGD:8553654 NCBI chrNW_004955480:8,853,449...8,906,859 JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:22157746) UniProt PMID:22157746 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300 		JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104 		JBrowse link
negative regulation of dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak3 Janus kinase 3 involved_in ISO (PMID:16020505) BHF-UCL PMID:16020505 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
negative regulation of DNA methylation-dependent heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3l DNA methyltransferase 3 like involved_in ISO (PMID:24074865) UniProt PMID:24074865 NCBI chrNW_004955407:41,177,582...41,186,965
Ensembl chrNW_004955407:41,177,582...41,186,965 		JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (PMID:20010842) UniProt PMID:20010842 NCBI chrNW_004955412:19,586,435...19,670,149
Ensembl chrNW_004955412:19,586,141...19,665,527 		JBrowse link
negative regulation of endothelin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:15560120 RGD:10043380 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822 		JBrowse link
negative regulation of fibroblast growth factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:24259513) MGI PMID:24259513 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (PMID:24259513) MGI PMID:24259513 NCBI chrNW_004955408:29,370,480...29,383,531
Ensembl chrNW_004955408:29,370,468...29,383,971 		JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19652095) BHF-UCL PMID:19652095 NCBI chrNW_004955518:4,788,857...4,800,273
Ensembl chrNW_004955518:4,788,656...4,801,204 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO (PMID:18191119) MGI PMID:18191119 NCBI chrNW_004955414:15,674,478...15,694,758
Ensembl chrNW_004955414:15,674,940...15,694,883 		JBrowse link
negative regulation of formation of translation preinitiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl13a ribosomal protein L13a involved_in ISO (PMID:17218275) UniProt PMID:17218275 NCBI chrNW_004955559:1,358,479...1,362,663
Ensembl chrNW_004955559:1,358,486...1,362,663 		JBrowse link
negative regulation of gene expression via chromosomal CpG island methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1 DNA repair associated acts_upstream_of_positive_effect ISO (PMID:20820192) BHF-UCL PMID:20820192 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528 		JBrowse link
G Ctcf CCCTC-binding factor acts_upstream_of_or_within ISO (PMID:14716017) MGI PMID:14716017 NCBI chrNW_004955484:9,041,226...9,092,924
Ensembl chrNW_004955484:9,042,524...9,064,927 		JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in ISO (PMID:17576694)
(PMID:24623306)
(PMID:18754681), (PMID:21745816)		 RGD
UniProt		 PMID:12473678 PMID:17576694 PMID:18754681 PMID:21745816 PMID:24623306 RGD:1359078 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha involved_in
acts_upstream_of_or_within		 ISO (PMID:12138111), (PMID:19786833), (PMID:23042785)
(PMID:21047779)
(PMID:30834655)		 UniProt
BHF-UCL
MGI		 PMID:12138111 PMID:19786833 PMID:21047779 PMID:23042785 PMID:30834655 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059 		JBrowse link
G Dnmt3l DNA methyltransferase 3 like acts_upstream_of_or_within ISO (PMID:30834655) MGI PMID:30834655 NCBI chrNW_004955407:41,177,582...41,186,965
Ensembl chrNW_004955407:41,177,582...41,186,965 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (PMID:17212651) MGI PMID:17212651 NCBI chrNW_004955437:396,736...411,144
Ensembl chrNW_004955437:396,742...411,144 		JBrowse link
G Hells helicase, lymphoid specific involved_in ISO (PMID:15105378) UniProt PMID:15105378 NCBI chrNW_004955507:995,389...1,034,852
Ensembl chrNW_004955507:990,429...1,034,852 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 involved_in ISO (PMID:23960241) BHF-UCL PMID:23960241 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO (PMID:20871592) UniProt PMID:20871592 NCBI chrNW_004955497:518,462...546,748 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_positive_effect ISO (PMID:19786833) BHF-UCL PMID:19786833 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO RGD PMID:22041901 RGD:9491827 NCBI chrNW_004955409:37,369,507...37,378,034
Ensembl chrNW_004955409:37,369,234...37,378,093 		JBrowse link
G Uhrf1 ubiquitin like with PHD and ring finger domains 1 involved_in ISO (PMID:17673620)
(PMID:17673620), (PMID:17994007)		 UniProt PMID:17673620 PMID:17994007 NCBI chrNW_004955495:4,153,898...4,154,611 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:21745816) UniProt PMID:21745816 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393 		JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_positive_effect ISO (PMID:23042785) ARUK-UCL PMID:23042785 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473 		JBrowse link
G Zfp57 ZFP57 zinc finger protein involved_in ISO (PMID:30602440) UniProt PMID:30602440 NCBI chrNW_004955583:151,338...154,827 JBrowse link
G Znf445 zinc finger protein 445 involved_in ISO (PMID:30602440) UniProt PMID:30602440 NCBI chrNW_004955420:26,972,008...26,995,063
Ensembl chrNW_004955420:26,986,101...26,991,678 		JBrowse link
negative regulation of gene expression, epigenetic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in ISO (PMID:24623306) UniProt PMID:24623306 NCBI chrNW_004955429:6,548,586...6,553,730
Ensembl chrNW_004955429:6,547,731...6,558,105 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in ISO (PMID:18243098) UniProt PMID:18243098 NCBI chrNW_004955412:26,627,606...26,650,554 JBrowse link
G Crebzf CREB/ATF bZIP transcription factor involved_in ISO (PMID:15705566) UniProt PMID:15705566 NCBI chrNW_004955414:7,190,234...7,213,042
Ensembl chrNW_004955414:7,206,343...7,209,498 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (PMID:24036311) MGI PMID:24036311 NCBI chrNW_004955414:26,347,508...26,373,726
Ensembl chrNW_004955414:26,347,508...26,373,785 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta involved_in ISO (PMID:18056424) UniProt PMID:18056424 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301 		JBrowse link
G Dnmt3l DNA methyltransferase 3 like involved_in ISO (PMID:12202768) UniProt PMID:12202768 NCBI chrNW_004955407:41,177,582...41,186,965
Ensembl chrNW_004955407:41,177,582...41,186,965 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 acts_upstream_of_or_within ISO (PMID:10976108) MGI PMID:10976108 NCBI chrNW_004955429:23,819,261...23,910,279
Ensembl chrNW_004955429:23,817,254...23,909,946 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:20154697)
(PMID:24623306)		 UniProt PMID:20154697 PMID:24623306 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:19057576) ARUK-UCL PMID:19057576 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (PMID:18850004), (PMID:24413532)
(PMID:10869435)		 BHF-UCL PMID:10869435 PMID:18850004 PMID:24413532 NCBI chrNW_004955542:1,629,691...1,886,160
Ensembl chrNW_004955542:1,629,691...1,886,210 		JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:24413532) UniProt PMID:24413532 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071 		JBrowse link
G Hdac9 histone deacetylase 9 involved_in ISO (PMID:11535832), (PMID:12590135), (PMID:28855441)
(PMID:21708950)		 BHF-UCL
ARUK-UCL		 PMID:11535832 PMID:12590135 PMID:21708950 PMID:28855441 NCBI chrNW_004955410:21,046,312...21,932,029
Ensembl chrNW_004955410:21,245,562...21,932,023 		JBrowse link
G Ifi16 interferon gamma inducible protein 16 involved_in ISO (PMID:24413532) UniProt PMID:24413532 NCBI chrNW_004955468:10,828,726...10,845,853 JBrowse link
G Lhx2 LIM homeobox 2 involved_in ISO (PMID:28053041) UniProt PMID:28053041 NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875 		JBrowse link
G LOC102008188 core histone macro-H2A.1 involved_in ISO (PMID:19734898), (PMID:23595991), (PMID:24071584) UniProt PMID:19734898 PMID:23595991 PMID:24071584 NCBI chrNW_004955408:30,497,531...30,550,095
Ensembl chrNW_004955408:30,497,531...30,550,118 		JBrowse link
G LOC102017503 core histone macro-H2A.2 involved_in ISO (PMID:19734898) UniProt PMID:19734898 NCBI chrNW_004955437:21,126,581...21,186,308
Ensembl chrNW_004955437:21,126,006...21,186,797 		JBrowse link
G Mettl4 methyltransferase 4, N6-adenosine involved_in ISO (PMID:30982744) UniProt PMID:30982744 NCBI chrNW_004955402:7,733,220...7,762,756
Ensembl chrNW_004955402:7,732,627...7,763,038 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO (PMID:26022416) UniProt PMID:26022416 NCBI chrNW_004955497:518,462...546,748 JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (PMID:24413532) UniProt PMID:24413532 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005 		JBrowse link
G N6amt1 N-6 adenine-specific DNA methyltransferase 1 involved_in ISO (PMID:30017583) UniProt PMID:30017583 NCBI chrNW_004955407:28,256,654...28,277,514
Ensembl chrNW_004955407:28,256,649...28,276,460 		JBrowse link
G Phf19 PHD finger protein 19 involved_in ISO (PMID:23104054) UniProt PMID:23104054 NCBI chrNW_004955419:7,160,249...7,179,323
Ensembl chrNW_004955419:7,160,249...7,179,318 		JBrowse link
G Pphln1 periphilin 1 involved_in ISO (PMID:26022416) UniProt PMID:26022416 NCBI chrNW_004955500:1,744,968...1,892,056
Ensembl chrNW_004955500:1,806,658...1,892,056 		JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D involved_in ISO (PMID:23242139) UniProt PMID:23242139 NCBI chrNW_004955451:1,878,110...1,915,794
Ensembl chrNW_004955451:1,878,629...1,915,654 		JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO (PMID:23670199) MGI PMID:23670199 NCBI chrNW_004955444:9,606,310...9,626,772
Ensembl chrNW_004955444:9,612,059...9,626,817 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:24735877) BHF-UCL PMID:24735877 NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748 		JBrowse link
G Samd7 sterile alpha motif domain containing 7 involved_in ISO (PMID:28900001) UniProt PMID:28900001 NCBI chrNW_004955420:161,353...178,768
Ensembl chrNW_004955420:161,353...177,936 		JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C member 5 involved_in ISO (PMID:16691198) CAFA PMID:16691198 NCBI chrNW_004955454:15,339,353...15,349,180
Ensembl chrNW_004955454:15,339,297...15,351,628 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:21847107) BHF-UCL PMID:21847107 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:31226208) UniProt PMID:31226208 NCBI chrNW_004955506:1,252,271...1,258,728
Ensembl chrNW_004955506:1,252,274...1,258,728 		JBrowse link
G Smyd5 SMYD family member 5 involved_in ISO (PMID:22921934) UniProt PMID:22921934 NCBI chrNW_004955424:12,408,059...12,422,424
Ensembl chrNW_004955424:12,408,059...12,423,164 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:24413057) UniProt PMID:24413057 NCBI chrNW_004955543:258,479...271,128
Ensembl chrNW_004955543:258,479...272,473 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (PMID:24413057) UniProt PMID:24413057 NCBI chrNW_004955429:19,503,197...19,526,454
Ensembl chrNW_004955429:19,503,197...19,528,027 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (PMID:26022416) UniProt PMID:26022416 NCBI chrNW_004955430:6,440,655...6,480,956
Ensembl chrNW_004955430:6,442,084...6,480,802 		JBrowse link
G Tfap2c transcription factor AP-2 gamma involved_in ISO (PMID:24413532) UniProt PMID:24413532 NCBI chrNW_004955445:2,626,896...2,636,607
Ensembl chrNW_004955445:2,626,823...2,636,607 		JBrowse link
G Trim27 tripartite motif containing 27 acts_upstream_of_or_within ISO (PMID:10976108) MGI PMID:10976108 NCBI chrNW_004955465:13,891,001...13,902,767
Ensembl chrNW_004955465:13,890,900...13,903,016 		JBrowse link
G Trim37 tripartite motif containing 37 involved_in ISO (PMID:25470042) UniProt PMID:25470042 NCBI chrNW_004955451:3,839,757...4,014,178
Ensembl chrNW_004955451:3,878,416...3,989,208 		JBrowse link
negative regulation of granulocyte colony-stimulating factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:26492563) UniProt PMID:26492563 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
negative regulation of granulocyte macrophage colony-stimulating factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd84 CD84 molecule involved_in ISO (PMID:22068234) UniProt PMID:22068234 NCBI chrNW_004955468:12,280,467...12,313,976
Ensembl chrNW_004955468:12,281,686...12,313,912 		JBrowse link
negative regulation of hepatocyte growth factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inhbb inhibin subunit beta B involved_in ISO (PMID:12419948) UniProt PMID:12419948 NCBI chrNW_004955459:9,482,998...9,488,489
Ensembl chrNW_004955459:9,482,873...9,488,489 		JBrowse link
negative regulation of heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO (PMID:24820035) GO_Central PMID:24820035 NCBI chrNW_004955407:36,456,628...36,588,940
Ensembl chrNW_004955407:36,453,098...36,589,382 		JBrowse link
G Rlf RLF zinc finger acts_upstream_of_or_within ISO (PMID:25857663) MGI PMID:25857663 NCBI chrNW_004955452:17,588,066...17,687,553
Ensembl chrNW_004955452:17,587,952...17,687,616 		JBrowse link
negative regulation of immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd22 CD22 molecule involved_in ISO (PMID:20200274) ARUK-UCL PMID:20200274 NCBI chrNW_004955468:4,609,601...4,622,601
Ensembl chrNW_004955468:4,612,044...4,625,882 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:12385742) MGI PMID:12385742 NCBI chrNW_004955462:14,639,396...14,653,801 JBrowse link
G Ifnb1 interferon beta 1 ISO RGD PMID:10494101 RGD:401854240 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Il13ra2 interleukin 13 receptor subunit alpha 2 acts_upstream_of_or_within ISO (PMID:15944273) MGI PMID:15944273 NCBI chrNW_004955490:708,144...758,195
Ensembl chrNW_004955490:709,446...758,272 		JBrowse link
G Il33 interleukin 33 involved_in ISO (PMID:18268038) BHF-UCL PMID:18268038 NCBI chrNW_004955434:10,145,449...10,187,595
Ensembl chrNW_004955434:10,171,812...10,188,948 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:19328063) ParkinsonsUK-UCL PMID:19328063 NCBI chrNW_004955547:335,344...358,503
Ensembl chrNW_004955547:335,275...358,503 		JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO (PMID:29536159) MGI PMID:29536159 NCBI chrNW_004955451:14,571,707...14,579,890
Ensembl chrNW_004955451:14,571,556...14,579,948 		JBrowse link
negative regulation of interferon-alpha production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:26492563) UniProt PMID:26492563 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:24560620) UniProt PMID:24560620 NCBI chrNW_004955442:13,795,322...13,834,362
Ensembl chrNW_004955442:13,814,434...13,833,222 		JBrowse link
G Nmi N-myc and STAT interactor acts_upstream_of_or_within ISO (PMID:23956435) MGI PMID:23956435 NCBI chrNW_004955440:16,850,469...16,877,295
Ensembl chrNW_004955440:16,848,108...16,877,674 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO (PMID:26231120) UniProt PMID:26231120 NCBI chrNW_004955495:3,943,075...3,991,361
Ensembl chrNW_004955495:3,943,170...3,990,927 		JBrowse link
negative regulation of interferon-beta production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg9a autophagy related 9A acts_upstream_of_or_within ISO (PMID:24670807) MGI PMID:24670807 NCBI chrNW_004955453:14,203,798...14,214,760
Ensembl chrNW_004955453:14,206,065...14,213,729 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955495:5,561,359...5,571,945
Ensembl chrNW_004955495:5,561,979...5,571,682 		JBrowse link
G Crebbp CREB binding protein involved_in ISO (PMID:11583620) CAFA PMID:11583620 NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004 		JBrowse link
G Morc3 MORC family CW-type zinc finger 3 involved_in ISO (PMID:34759314) UniProt PMID:34759314 NCBI chrNW_004955407:35,548,219...35,599,543
Ensembl chrNW_004955407:35,548,219...35,599,543 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:24560620) UniProt PMID:24560620 NCBI chrNW_004955442:13,795,322...13,834,362
Ensembl chrNW_004955442:13,814,434...13,833,222 		JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within ISO (PMID:21703540) MGI PMID:21703540 NCBI chrNW_004955412:20,275,767...20,287,414
Ensembl chrNW_004955412:20,275,917...20,287,414 		JBrowse link
G Nmi N-myc and STAT interactor acts_upstream_of_or_within ISO (PMID:23956435) MGI PMID:23956435 NCBI chrNW_004955440:16,850,469...16,877,295
Ensembl chrNW_004955440:16,848,108...16,877,674 		JBrowse link
G Ppm1b protein phosphatase, Mg2+/Mn2+ dependent 1B involved_in ISO (PMID:22750291) UniProt PMID:22750291 NCBI chrNW_004955441:11,276,525...11,338,586
Ensembl chrNW_004955441:11,276,525...11,352,095 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO (PMID:26231120) UniProt PMID:26231120 NCBI chrNW_004955495:3,943,075...3,991,361
Ensembl chrNW_004955495:3,943,170...3,990,927 		JBrowse link
G Rel REL proto-oncogene, NF-kB subunit involved_in ISO (PMID:22065573) CACAO PMID:22065573 NCBI chrNW_004955424:22,909,035...22,939,651
Ensembl chrNW_004955424:22,911,541...22,939,651 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO (PMID:22065573) CACAO PMID:22065573 NCBI chrNW_004955555:2,060,533...2,086,229
Ensembl chrNW_004955555:2,060,533...2,086,229 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (PMID:17954568) ARUK-UCL PMID:17954568 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (PMID:22079989) MGI PMID:22079989 NCBI chrNW_004955542:2,264,472...2,301,083
Ensembl chrNW_004955542:2,265,901...2,301,215 		JBrowse link
G Traip TRAF interacting protein involved_in ISO (PMID:22945920) CACAO PMID:22945920 NCBI chrNW_004955532:1,725,608...1,746,690
Ensembl chrNW_004955532:1,726,061...1,746,591 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:16260628) UniProt PMID:16260628 NCBI chrNW_004955438:21,341,374...21,377,674 JBrowse link
negative regulation of interleukin-1 alpha production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO PMID:19627440 ARUK-UCL PMID:19627440 RGD:13673772 NCBI chrNW_004955433:15,023,272...15,034,650
Ensembl chrNW_004955433:15,023,050...15,034,711 		JBrowse link
G Il1r2 interleukin 1 receptor type 2 acts_upstream_of_or_within ISO (PMID:23395675) MGI PMID:23395675 NCBI chrNW_004955470:7,518,565...7,562,219
Ensembl chrNW_004955470:7,518,663...7,559,470 		JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:15560120 RGD:10043380 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822 		JBrowse link
negative regulation of interleukin-1 beta production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within ISO (PMID:11168643) MGI PMID:11168643 NCBI chrNW_004955495:2,418,113...2,421,181
Ensembl chrNW_004955495:2,418,364...2,421,538 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO (PMID:12458630) BHF-UCL PMID:12458630 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298 		JBrowse link
G Aqp4 aquaporin 4 ISO RGD PMID:22449442 RGD:8695996 NCBI chrNW_004955772:1,160...10,709
Ensembl chrNW_004955772:1,159...10,709 		JBrowse link
G Arrb2 arrestin beta 2 involved_in ISO (PMID:16378096) UniProt PMID:16378096 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit acts_upstream_of_or_within ISO (PMID:12508119) MGI PMID:12508119 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700 		JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in ISO (PMID:29164996) UniProt PMID:29164996 NCBI chrNW_004955486:9,475,520...9,478,925
Ensembl chrNW_004955486:9,475,520...9,478,925 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO PMID:20018408 ARUK-UCL PMID:20018408 RGD:9491804 NCBI chrNW_004955427:24,691,206...24,705,599
Ensembl chrNW_004955427:24,701,073...24,707,230 		JBrowse link
G Elf4 E74 like ETS transcription factor 4 involved_in ISO (PMID:34326534) UniProt PMID:34326534 NCBI chrNW_004955473:4,934,770...4,986,283
Ensembl chrNW_004955473:4,942,385...4,986,433 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 ISO RGD PMID:19204184 RGD:9685562 NCBI chrNW_004955486:4,941,143...4,955,693
Ensembl chrNW_004955486:4,941,143...4,955,693 		JBrowse link
G Ffar1 free fatty acid receptor 1 involved_in ISO (PMID:23809162) UniProt PMID:23809162 NCBI chrNW_004955468:4,626,567...4,627,683
Ensembl chrNW_004955468:4,626,748...4,627,650 		JBrowse link
G Ffar4 free fatty acid receptor 4 involved_in ISO (PMID:23809162) UniProt PMID:23809162 NCBI chrNW_004955507:81,910...110,047
Ensembl chrNW_004955507:81,284...110,047 		JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO RGD PMID:32428552 RGD:405878062 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:15232612) RGD
UniProt		 PMID:15232612 PMID:19620309 RGD:12905041 NCBI chrNW_004955561:1,676,475...1,682,205
Ensembl chrNW_004955561:1,676,576...1,681,812 		JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in ISO (PMID:15232612) UniProt PMID:15232612 NCBI chrNW_004955420:2,483,173...2,486,414
Ensembl chrNW_004955420:2,478,877...2,487,215 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO (PMID:32460388) UniProt PMID:32460388 NCBI chrNW_004955481:3,671,728...3,681,279
Ensembl chrNW_004955481:3,670,111...3,685,051 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO (PMID:18962899) BHF-UCL PMID:18962899 NCBI chrNW_004955422:17,914,228...17,916,918
Ensembl chrNW_004955422:17,914,305...17,917,428 		JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:27277332) ARUK-UCL PMID:27277332 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in ISO (PMID:20041150) BHF-UCL PMID:20041150 NCBI chrNW_004955442:14,068,436...14,093,889
Ensembl chrNW_004955442:14,068,348...14,094,016 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:22863753) CACAO PMID:22863753 NCBI chrNW_004955442:13,795,322...13,834,362
Ensembl chrNW_004955442:13,814,434...13,833,222 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:12483741) BHF-UCL PMID:12483741 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:24407287) AgBase PMID:24407287 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406 		JBrowse link
G Rad21 RAD21 cohesin complex component ISO RGD PMID:36538854 RGD:243065265 NCBI chrNW_004955417:22,941,549...22,966,395
Ensembl chrNW_004955417:22,941,479...22,966,837 		JBrowse link
G Serpinb1 serpin family B member 1 involved_in ISO (PMID:30692621) UniProt PMID:30692621 NCBI chrNW_004955465:10,541,562...10,551,417
Ensembl chrNW_004955465:10,541,485...10,550,290 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:28094437)
(PMID:18006655), (PMID:18342009)		 MGI
BHF-UCL		 PMID:18006655 PMID:18342009 PMID:28094437 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:28592261) UniProt PMID:28592261 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:21616078) UniProt PMID:21616078 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
negative regulation of interleukin-1 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISO (PMID:22496641) UniProt PMID:22496641 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:20103767) UniProt PMID:20103767 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809 		JBrowse link
G Hdac3 histone deacetylase 3 ISO RGD PMID:22772764 RGD:9590127 NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234 		JBrowse link
G Nlrp12 NLR family pyrin domain containing 12 involved_in ISO (PMID:16203735) HGNC-UCL PMID:16203735 NCBI chrNW_004955604:317,987...331,051 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:18972444) UniProt PMID:18972444 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:24407287) AgBase PMID:24407287 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406 		JBrowse link
negative regulation of interleukin-10 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in ISO (PMID:22473704) UniProt PMID:22473704 NCBI chrNW_004955437:645,482...648,607
Ensembl chrNW_004955437:645,897...648,479 		JBrowse link
G Btk Bruton tyrosine kinase ISO RGD PMID:28352114 RGD:151665126 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120 		JBrowse link
G Cd274 CD274 molecule involved_in ISO (PMID:12538684), (PMID:24187568) UniProt PMID:12538684 PMID:24187568 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Cd84 CD84 molecule involved_in ISO (PMID:20628063) UniProt PMID:20628063 NCBI chrNW_004955468:12,280,467...12,313,976
Ensembl chrNW_004955468:12,281,686...12,313,912 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:23086448) UniProt PMID:23086448 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604 		JBrowse link
G Epx eosinophil peroxidase acts_upstream_of_or_within ISO (PMID:16926417) MGI PMID:16926417 NCBI chrNW_004955451:4,818,809...4,828,913
Ensembl chrNW_004955451:4,818,809...4,828,913 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:12385742) MGI PMID:12385742 NCBI chrNW_004955462:14,639,396...14,653,801 JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:15466453)
(PMID:16275384)		 UniProt
MGI		 PMID:15466453 PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (PMID:19234212) MGI PMID:19234212 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:16751425) BHF-UCL PMID:16751425 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:16751425) BHF-UCL PMID:16751425 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G Il23r interleukin 23 receptor involved_in ISO (PMID:16751425) BHF-UCL PMID:16751425 NCBI chrNW_004955423:23,841,342...23,885,191
Ensembl chrNW_004955423:23,842,475...23,884,904 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (PMID:16020505) BHF-UCL PMID:16020505 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in ISO (PMID:12538684) UniProt PMID:12538684 NCBI chrNW_004955434:9,540,047...9,559,335 JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:14568985) UniProt PMID:14568985 NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419 		JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 involved_in ISO (PMID:11485735) UniProt PMID:11485735 NCBI chrNW_004955437:11,877,051...11,915,220
Ensembl chrNW_004955437:11,876,895...11,915,460 		JBrowse link
G Trib2 tribbles pseudokinase 2 involved_in ISO (PMID:18643775) BHF-UCL PMID:18643775 NCBI chrNW_004955487:6,889,571...6,915,068
Ensembl chrNW_004955487:6,890,246...6,915,135 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:25690660) ARUK-UCL PMID:25690660 NCBI chrNW_004955468:2,673,657...2,677,633
Ensembl chrNW_004955468:2,673,980...2,677,321 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
negative regulation of interleukin-12 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within ISO (PMID:11168643) MGI PMID:11168643 NCBI chrNW_004955495:2,418,113...2,421,181
Ensembl chrNW_004955495:2,418,364...2,421,538 		JBrowse link
G Arrb2 arrestin beta 2 involved_in ISO (PMID:16378096) UniProt PMID:16378096 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022 		JBrowse link
G C1qbp complement C1q binding protein involved_in ISO (PMID:16177118), (PMID:17881511) UniProt PMID:16177118 PMID:17881511 NCBI chrNW_004955467:10,788,142...10,792,272
Ensembl chrNW_004955467:10,788,277...10,792,449 		JBrowse link
G Ccr7 C-C motif chemokine receptor 7 acts_upstream_of ISO (PMID:20176793) BHF-UCL PMID:20176793 NCBI chrNW_004955451:15,086,119...15,101,862
Ensembl chrNW_004955451:15,086,119...15,095,561 		JBrowse link
G Cmklr1 chemerin chemokine-like receptor 1 involved_in ISO (PMID:15753205) UniProt PMID:15753205 NCBI chrNW_004955455:9,587,421...9,638,602
Ensembl chrNW_004955455:9,589,822...9,590,937 		JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within ISO (PMID:15240714) MGI PMID:15240714 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (PMID:18156187)
(PMID:12150927)		 BHF-UCL PMID:12150927 PMID:18156187 NCBI chrNW_004955458:12,839,995...12,880,285
Ensembl chrNW_004955458:12,846,237...12,879,316 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (PMID:16020505) BHF-UCL PMID:16020505 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in ISO (PMID:20041150) BHF-UCL PMID:20041150 NCBI chrNW_004955442:14,068,436...14,093,889
Ensembl chrNW_004955442:14,068,348...14,094,016 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 acts_upstream_of_or_within ISO (PMID:14568984) MGI PMID:14568984 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:22863753) CACAO PMID:22863753 NCBI chrNW_004955442:13,795,322...13,834,362
Ensembl chrNW_004955442:13,814,434...13,833,222 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15220916), (PMID:16949315) MGI PMID:15220916 PMID:16949315 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Pibf1 progesterone immunomodulatory binding factor 1 involved_in ISO (PMID:14634107) UniProt PMID:14634107 NCBI chrNW_004955404:33,713,903...33,897,622
Ensembl chrNW_004955404:33,714,193...33,897,622 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:16317102) UniProt PMID:16317102 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:14568985), (PMID:16882710) BHF-UCL PMID:14568985 PMID:16882710 NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419 		JBrowse link
G Tigit T cell immunoreceptor with Ig and ITIM domains involved_in ISO (PMID:19011627) UniProt PMID:19011627 NCBI chrNW_004955427:14,358,326...14,381,074
Ensembl chrNW_004955427:14,360,272...14,382,524 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:16949315) MGI PMID:16949315 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258 		JBrowse link
G Tlr8 toll like receptor 8 involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chrNW_004955544:302,027...317,110
Ensembl chrNW_004955544:303,319...306,426 		JBrowse link
negative regulation of interleukin-13 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO (PMID:27214549) UniProt PMID:27214549 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:18445004) UniProt PMID:18445004 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (PMID:15356574) MGI PMID:15356574 NCBI chrNW_004955599:688,414...690,644 JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 involved_in ISO (PMID:11485735) UniProt PMID:11485735 NCBI chrNW_004955437:11,877,051...11,915,220
Ensembl chrNW_004955437:11,876,895...11,915,460 		JBrowse link
negative regulation of interleukin-17 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO (PMID:27214549) UniProt PMID:27214549 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 acts_upstream_of ISO (PMID:24038088) ARUK-UCL PMID:24038088 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513 		JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:18368049) UniProt PMID:18368049 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:18501882) BHF-UCL PMID:18501882 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:16482511) BHF-UCL PMID:16482511 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:16482511) BHF-UCL PMID:16482511 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il27ra interleukin 27 receptor subunit alpha involved_in ISO (PMID:22927332) BHF-UCL PMID:22927332 NCBI chrNW_004955415:32,749,682...32,762,532
Ensembl chrNW_004955415:32,749,094...32,761,882 		JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in ISO (PMID:23147407) UniProt PMID:23147407 NCBI chrNW_004955470:1,209,389...1,214,730
Ensembl chrNW_004955470:1,209,325...1,214,821 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004955543:452,172...484,564
Ensembl chrNW_004955543:452,121...484,560 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615 		JBrowse link
G Prnp prion protein (Kanno blood group) involved_in ISO (PMID:20145049) BHF-UCL PMID:20145049 NCBI chrNW_004955415:15,442,313...15,454,644
Ensembl chrNW_004955415:15,442,313...15,454,644 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:18368049) UniProt PMID:18368049 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:16239543) MGI PMID:16239543 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (PMID:18203139), (PMID:20051628) BHF-UCL PMID:18203139 PMID:20051628 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:18501882) BHF-UCL PMID:18501882 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO (PMID:24042119) MGI PMID:24042119 NCBI chrNW_004955532:2,128,430...2,131,235
Ensembl chrNW_004955532:2,128,430...2,131,235 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
negative regulation of interleukin-18 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd84 CD84 molecule involved_in ISO (PMID:22068234) UniProt PMID:22068234 NCBI chrNW_004955468:12,280,467...12,313,976
Ensembl chrNW_004955468:12,281,686...12,313,912 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15220916) MGI PMID:15220916 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
negative regulation of interleukin-2 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd276 CD276 molecule acts_upstream_of_or_within ISO (PMID:12925852) MGI PMID:12925852 NCBI chrNW_004955450:3,884,437...3,896,416 JBrowse link
G Cd34 CD34 molecule involved_in ISO (PMID:9815891) UniProt PMID:9815891 NCBI chrNW_004955406:43,116,688...43,130,405
Ensembl chrNW_004955406:43,117,816...43,130,463 		JBrowse link
G Ezr ezrin involved_in ISO (PMID:17911601) UniProt PMID:17911601 NCBI chrNW_004955439:3,701,722...3,740,345
Ensembl chrNW_004955439:3,703,013...3,740,345 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:15466453), (PMID:17360565), (PMID:17377532)
(PMID:18368049)
(PMID:17377532)
(PMID:16769892), (PMID:17028180)
(PMID:16873067), (PMID:23169781)		 UniProt
MGI		 PMID:15466453 PMID:16769892 PMID:16873067 PMID:17028180 PMID:17360565 More... NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:18792410) MGI PMID:18792410 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Gpr174 G protein-coupled receptor 174 involved_in ISO (PMID:29457279) UniProt PMID:29457279 NCBI chrNW_004955557:2,071,792...2,102,865
Ensembl chrNW_004955557:2,071,792...2,102,865 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:26492563)
(PMID:14556006)		 UniProt PMID:14556006 PMID:26492563 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Hdac7 histone deacetylase 7 involved_in ISO (PMID:17360565) BHF-UCL PMID:17360565 NCBI chrNW_004955500:6,692,656...6,707,453
Ensembl chrNW_004955500:6,693,668...6,709,864 		JBrowse link
G Homer2 homer scaffold protein 2 involved_in ISO (PMID:18218901) UniProt PMID:18218901 NCBI chrNW_004955416:13,671,115...13,828,413
Ensembl chrNW_004955416:13,741,161...13,818,060 		JBrowse link
G Homer3 homer scaffold protein 3 involved_in ISO (PMID:18218901) UniProt PMID:18218901 NCBI chrNW_004955524:2,754,970...2,760,198
Ensembl chrNW_004955524:2,755,367...2,760,198 		JBrowse link
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of_or_within ISO (PMID:19124723) MGI PMID:19124723 NCBI chrNW_004955501:1,826,687...1,863,261 JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:17360565) BHF-UCL PMID:17360565 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036 		JBrowse link
G Lag3 lymphocyte activating 3 acts_upstream_of_or_within ISO (PMID:12421911) MGI PMID:12421911 NCBI chrNW_004955413:4,379,529...4,385,456
Ensembl chrNW_004955413:4,378,972...4,385,909 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:18619870) ARUK-UCL PMID:18619870 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
G Nav3 neuron navigator 3 involved_in ISO (PMID:16166283) UniProt PMID:16166283 NCBI chrNW_004955405:16,428,643...17,213,253
Ensembl chrNW_004955405:16,869,441...17,213,325 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:19139201) MGI PMID:19139201 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:18972444) UniProt PMID:18972444 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751 		JBrowse link
G Prnp prion protein (Kanno blood group) involved_in ISO (PMID:20145049) BHF-UCL PMID:20145049 NCBI chrNW_004955415:15,442,313...15,454,644
Ensembl chrNW_004955415:15,442,313...15,454,644 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in ISO (PMID:15661907) ARUK-UCL PMID:15661907 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Sftpd surfactant protein D ISO RGD PMID:9794387 RGD:4144057 NCBI chrNW_004955510:213,468...226,096
Ensembl chrNW_004955510:213,438...225,896 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:23616576) UniProt PMID:23616576 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:18223652) BHF-UCL PMID:18223652 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
G Trim27 tripartite motif containing 27 involved_in ISO (PMID:22128329) UniProt PMID:22128329 NCBI chrNW_004955465:13,891,001...13,902,767
Ensembl chrNW_004955465:13,890,900...13,903,016 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 acts_upstream_of_or_within ISO (PMID:17016562) MGI PMID:17016562 NCBI chrNW_004955475:5,461,512...5,481,552
Ensembl chrNW_004955475:5,461,064...5,481,564 		JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:15634918) UniProt PMID:15634918 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
negative regulation of interleukin-23 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:16982892) BHF-UCL PMID:16982892 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (PMID:18203139) BHF-UCL PMID:18203139 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
negative regulation of interleukin-3 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:26492563) UniProt PMID:26492563 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
negative regulation of interleukin-4 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd83 CD83 molecule acts_upstream_of_or_within ISO (PMID:15322158) MGI PMID:15322158 NCBI chrNW_004955465:676,006...692,770
Ensembl chrNW_004955465:674,168...693,353 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 acts_upstream_of ISO (PMID:24038088) ARUK-UCL PMID:24038088 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:15466453)
(PMID:16275384)
(PMID:16769892)		 UniProt
MGI		 PMID:15466453 PMID:16275384 PMID:16769892 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:18445004) UniProt PMID:18445004 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (PMID:15356574) MGI PMID:15356574 NCBI chrNW_004955599:688,414...690,644 JBrowse link
G Zfpm1 zinc finger protein, FOG family member 1 involved_in ISO (PMID:21646796) BHF-UCL PMID:21646796 NCBI chrNW_004955541:2,461,690...2,495,614 JBrowse link
negative regulation of interleukin-5 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epx eosinophil peroxidase acts_upstream_of_or_within ISO (PMID:16926417) MGI PMID:16926417 NCBI chrNW_004955451:4,818,809...4,828,913
Ensembl chrNW_004955451:4,818,809...4,828,913 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384)
(PMID:16769892)		 MGI PMID:16275384 PMID:16769892 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:18445004) UniProt PMID:18445004 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (PMID:15356574) MGI PMID:15356574 NCBI chrNW_004955599:688,414...690,644 JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 involved_in ISO (PMID:11485735) UniProt PMID:11485735 NCBI chrNW_004955437:11,877,051...11,915,220
Ensembl chrNW_004955437:11,876,895...11,915,460 		JBrowse link
negative regulation of interleukin-6 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:11096136 RGD:8548521 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980 		JBrowse link
G Aqp4 aquaporin 4 ISO RGD PMID:22449442 RGD:8695996 NCBI chrNW_004955772:1,160...10,709
Ensembl chrNW_004955772:1,159...10,709 		JBrowse link
G Arrb1 arrestin beta 1 involved_in ISO (PMID:16378096) UniProt PMID:16378096 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135 		JBrowse link
G Arrb2 arrestin beta 2 involved_in ISO (PMID:16378096) UniProt PMID:16378096 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022 		JBrowse link
G Bank1 B cell scaffold protein with ankyrin repeats 1 acts_upstream_of_or_within ISO (PMID:24227780) MGI PMID:24227780 NCBI chrNW_004955496:6,267,618...6,511,195
Ensembl chrNW_004955496:6,267,551...6,470,948 		JBrowse link
G Bpi bactericidal permeability increasing protein involved_in ISO (PMID:8409400) BHF-UCL PMID:8409400 NCBI chrNW_004955445:18,393,854...18,433,948
Ensembl chrNW_004955445:18,391,215...18,427,980 		JBrowse link
G C1qtnf3 C1q and TNF related 3 involved_in ISO (PMID:16213490) UniProt PMID:16213490 NCBI chrNW_004955426:19,588,637...19,606,557
Ensembl chrNW_004955426:19,585,460...19,606,557 		JBrowse link
G C5ar2 complement C5a receptor 2 involved_in ISO (PMID:16204243) UniProt PMID:16204243 NCBI chrNW_004955574:1,221,950...1,242,547 JBrowse link
G Cd200r1 CD200 receptor 1 involved_in ISO PMID:18164423 ARUK-UCL PMID:18164423 RGD:13792521 NCBI chrNW_004955427:13,143,695...13,148,743 JBrowse link
G Cd24 CD24 molecule involved_in ISO (PMID:19264983) UniProt PMID:19264983 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cd84 CD84 molecule involved_in ISO (PMID:20628063) UniProt PMID:20628063 NCBI chrNW_004955468:12,280,467...12,313,976
Ensembl chrNW_004955468:12,281,686...12,313,912 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit acts_upstream_of_or_within ISO (PMID:12508119) MGI PMID:12508119 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700 		JBrowse link
G Csk C-terminal Src kinase ISO RGD PMID:10411542 RGD:5134371 NCBI chrNW_004955450:3,127,561...3,144,550
Ensembl chrNW_004955450:3,127,561...3,144,550 		JBrowse link
G Elf4 E74 like ETS transcription factor 4 involved_in ISO (PMID:34326534) UniProt PMID:34326534 NCBI chrNW_004955473:4,934,770...4,986,283
Ensembl chrNW_004955473:4,942,385...4,986,433 		JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (PMID:16002694) BHF-UCL PMID:16002694 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384) MGI PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:19657094), (PMID:20103767) UniProt PMID:19657094 PMID:20103767 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:19279008) BHF-UCL PMID:19279008 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:15232612) UniProt PMID:15232612 NCBI chrNW_004955561:1,676,475...1,682,205
Ensembl chrNW_004955561:1,676,576...1,681,812 		JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in ISO (PMID:15232612) UniProt PMID:15232612 NCBI chrNW_004955420:2,483,173...2,486,414
Ensembl chrNW_004955420:2,478,877...2,487,215 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) UniProt PMID:22842346 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Hgf hepatocyte growth factor acts_upstream_of_or_within ISO (PMID:21072211) MGI PMID:21072211 NCBI chrNW_004955410:4,114,280...4,181,953
Ensembl chrNW_004955410:4,114,778...4,182,058 		JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:10443688) BHF-UCL PMID:10443688 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Il27ra interleukin 27 receptor subunit alpha involved_in ISO (PMID:22927332) BHF-UCL PMID:22927332 NCBI chrNW_004955415:32,749,682...32,762,532
Ensembl chrNW_004955415:32,749,094...32,761,882 		JBrowse link
G Il36rn interleukin 36 receptor antagonist acts_upstream_of_or_within ISO (PMID:21860022) MGI PMID:21860022 NCBI chrNW_004955470:1,209,389...1,214,730
Ensembl chrNW_004955470:1,209,325...1,214,821 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within ISO (PMID:12161749) MGI PMID:12161749 NCBI chrNW_004955453:2,938,659...3,037,211
Ensembl chrNW_004955453:2,938,659...3,037,211 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (PMID:18156187)
(PMID:12150927)		 BHF-UCL PMID:12150927 PMID:18156187 NCBI chrNW_004955458:12,839,995...12,880,285
Ensembl chrNW_004955458:12,846,237...12,879,316 		JBrowse link
G Muc16 mucin 16, cell surface associated acts_upstream_of_or_within ISO (PMID:24812549) MGI PMID:24812549 NCBI chrNW_004955563:432,160...581,330 JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:22863753)
(PMID:22863753), (PMID:24560620)		 CACAO
UniProt		 PMID:22863753 PMID:24560620 NCBI chrNW_004955442:13,795,322...13,834,362
Ensembl chrNW_004955442:13,814,434...13,833,222 		JBrowse link
G Nlrp12 NLR family pyrin domain containing 12 involved_in ISO (PMID:16203735) HGNC-UCL PMID:16203735 NCBI chrNW_004955604:317,987...331,051 JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within ISO (PMID:21703540) MGI PMID:21703540 NCBI chrNW_004955412:20,275,767...20,287,414
Ensembl chrNW_004955412:20,275,917...20,287,414 		JBrowse link
G Nmb neuromedin B involved_in ISO (PMID:31601264) UniProt PMID:31601264 NCBI chrNW_004955416:14,467,648...14,470,645
Ensembl chrNW_004955416:14,467,650...14,470,515 		JBrowse link
G Nmbr neuromedin B receptor involved_in ISO (PMID:31601264) UniProt PMID:31601264 NCBI chrNW_004955436:18,116,274...18,127,045
Ensembl chrNW_004955436:18,116,274...18,127,045 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:21242261) UniProt PMID:21242261 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751 		JBrowse link
G Orm1 orosomucoid 1 involved_in ISO (PMID:23973664) CACAO PMID:23973664 NCBI chrNW_004955419:13,262,119...13,264,986 JBrowse link
G Prg4 proteoglycan 4 acts_upstream_of_or_within ISO (PMID:21939632) MGI PMID:21939632 NCBI chrNW_004955406:24,726,483...24,742,590 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106) UniProt PMID:23991106 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 involved_in ISO (PMID:17954568) ARUK-UCL PMID:17954568 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177 		JBrowse link
G Rabgef1 RAB guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:16533754) MGI PMID:16533754 NCBI chrNW_004955456:8,648,925...8,716,337
Ensembl chrNW_004955456:8,674,469...8,718,821 		JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:16227999) BHF-UCL PMID:16227999 NCBI chrNW_004955416:28,152,984...28,162,173
Ensembl chrNW_004955416:28,153,460...28,162,095 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (PMID:17954568) ARUK-UCL PMID:17954568 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:16317102) UniProt PMID:16317102 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:24255059) BHF-UCL PMID:24255059 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389 		JBrowse link
G Syt11 synaptotagmin 11 involved_in ISO (PMID:28686317)
(PMID:23303671), (PMID:25063865)		 UniProt
ParkinsonsUK-UCL		 PMID:23303671 PMID:25063865 PMID:28686317 NCBI chrNW_004955545:2,054,720...2,074,526
Ensembl chrNW_004955545:2,054,721...2,074,526 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (PMID:18203139), (PMID:20051628) BHF-UCL PMID:18203139 PMID:20051628 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10443688) BHF-UCL PMID:10443688 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:18006655), (PMID:18342009), (PMID:21088135) BHF-UCL PMID:18006655 PMID:18342009 PMID:21088135 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO RGD PMID:20501675 RGD:5130988 NCBI chrNW_004955413:3,982,670...3,996,320
Ensembl chrNW_004955413:3,981,400...3,996,021 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:18178554)
(PMID:21616078)		 BHF-UCL
UniProt		 PMID:18178554 PMID:21616078 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
negative regulation of interleukin-8 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in ISO (PMID:22056994) BHF-UCL PMID:22056994 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Anxa4 annexin A4 involved_in ISO (PMID:22056994) BHF-UCL PMID:22056994 NCBI chrNW_004955424:15,323,604...15,389,136
Ensembl chrNW_004955424:15,321,990...15,389,136 		JBrowse link
G Arrb1 arrestin beta 1 involved_in ISO (PMID:16378096) UniProt PMID:16378096 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135 		JBrowse link
G Bcl3 BCL3 transcription coactivator involved_in ISO (PMID:16306601) UniProt PMID:16306601 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466 		JBrowse link
G Bpi bactericidal permeability increasing protein involved_in ISO (PMID:8409400) BHF-UCL PMID:8409400 NCBI chrNW_004955445:18,393,854...18,433,948
Ensembl chrNW_004955445:18,391,215...18,427,980 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955495:5,561,359...5,571,945
Ensembl chrNW_004955495:5,561,979...5,571,682 		JBrowse link
G Klf4 KLF transcription factor 4 involved_in ISO (PMID:20551324) BHF-UCL PMID:20551324 NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174 		JBrowse link
G LOC102018844 neutrophil elastase involved_in ISO (PMID:12223522) UniProt PMID:12223522 NCBI chrNW_004955495:6,964,577...6,967,208
Ensembl chrNW_004955495:6,964,667...6,967,106 		JBrowse link
G Map2k5 mitogen-activated protein kinase kinase 5 involved_in ISO PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chrNW_004955450:8,207,577...8,458,258
Ensembl chrNW_004955450:8,203,569...8,458,258 		JBrowse link
G Mapkbp1 mitogen-activated protein kinase binding protein 1 involved_in ISO (PMID:22700971) UniProt PMID:22700971 NCBI chrNW_004955416:8,570,684...8,626,748
Ensembl chrNW_004955416:8,571,044...8,626,748 		JBrowse link
G Otud7b OTU deubiquitinase 7B acts_upstream_of ISO (PMID:21097510) ParkinsonsUK-UCL PMID:21097510 NCBI chrNW_004955413:758,098...812,605
Ensembl chrNW_004955413:751,546...812,605 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106) UniProt PMID:23991106 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in ISO (PMID:21217009) UniProt PMID:21217009 NCBI chrNW_004955567:789,396...809,597
Ensembl chrNW_004955567:789,182...809,636 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chrNW_004955443:8,401,461...8,427,175
Ensembl chrNW_004955443:8,422,534...8,424,942 		JBrowse link
negative regulation of IP-10 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004955482:9,339,174...9,359,266 JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly(ADP-ribose) polymerase family member 3 involved_in ISO (PMID:26000965) UniProt PMID:26000965 NCBI chrNW_004955532:3,591,484...3,597,549
Ensembl chrNW_004955532:3,591,499...3,597,549 		JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:10490661) MGI PMID:10490661 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384) MGI PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
negative regulation of macrophage cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within ISO (PMID:11168643) MGI PMID:11168643 NCBI chrNW_004955495:2,418,113...2,421,181
Ensembl chrNW_004955495:2,418,364...2,421,538 		JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within ISO (PMID:24670807) MGI PMID:24670807 NCBI chrNW_004955453:14,203,798...14,214,760
Ensembl chrNW_004955453:14,206,065...14,213,729 		JBrowse link
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Cuedc2 CUE domain containing 2 acts_upstream_of_or_within ISO (PMID:24882011) MGI PMID:24882011 NCBI chrNW_004955485:7,969,389...7,977,073
Ensembl chrNW_004955485:7,975,190...7,976,875 		JBrowse link
G Epx eosinophil peroxidase acts_upstream_of_or_within ISO (PMID:16926417) MGI PMID:16926417 NCBI chrNW_004955451:4,818,809...4,828,913
Ensembl chrNW_004955451:4,818,809...4,828,913 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (PMID:12150927) BHF-UCL PMID:12150927 NCBI chrNW_004955458:12,839,995...12,880,285
Ensembl chrNW_004955458:12,846,237...12,879,316 		JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within ISO (PMID:21703540) MGI PMID:21703540 NCBI chrNW_004955412:20,275,767...20,287,414
Ensembl chrNW_004955412:20,275,917...20,287,414 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15220916) MGI PMID:15220916 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:20875417) DFLAT PMID:20875417 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (PMID:20875417) DFLAT PMID:20875417 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248 		JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO (PMID:20875417) DFLAT PMID:20875417 NCBI chrNW_004955438:33,129...55,180
Ensembl chrNW_004955438:29,415...55,180 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004955542:1,959,765...2,000,665
Ensembl chrNW_004955542:1,959,765...2,000,665 		JBrowse link
negative regulation of macrophage inflammatory protein 1 alpha production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO (PMID:27074721) UniProt PMID:27074721 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in ISO (PMID:20041150) BHF-UCL PMID:20041150 NCBI chrNW_004955442:14,068,436...14,093,889
Ensembl chrNW_004955442:14,068,348...14,094,016 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (PMID:17954568) ARUK-UCL PMID:17954568 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
negative regulation of mast cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:15950739) MGI PMID:15950739 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:17234154 RGD:1601626 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979 		JBrowse link
G Rabgef1 RAB guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:16533754) MGI PMID:16533754 NCBI chrNW_004955456:8,648,925...8,716,337
Ensembl chrNW_004955456:8,674,469...8,718,821 		JBrowse link
negative regulation of miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1a HNF1 homeobox A ISO RGD PMID:23674172 RGD:150540303 NCBI chrNW_004955455:10,694,102...10,717,613
Ensembl chrNW_004955455:10,694,102...10,717,613 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:21522133) MGI PMID:21522133 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Zc3h10 zinc finger CCCH-type containing 10 involved_in ISO (PMID:28431233) UniProt PMID:28431233 NCBI chrNW_004955458:3,720,451...3,725,196
Ensembl chrNW_004955458:3,720,709...3,725,196 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (PMID:21522133) MGI PMID:21522133 NCBI chrNW_004955537:82,724...134,609
Ensembl chrNW_004955537:81,920...134,609 		JBrowse link
negative regulation of miRNA-mediated gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:18155131) UniProt PMID:18155131 NCBI chrNW_004955418:30,795...33,394
Ensembl chrNW_004955418:30,893...32,936 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO (PMID:26595526) UniProt PMID:26595526 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:25464849) UniProt PMID:25464849 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
negative regulation of mitochondrial translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Malsu1 mitochondrial assembly of ribosomal large subunit 1 involved_in ISO (PMID:22829778) UniProt PMID:22829778 NCBI chrNW_004955410:25,594,570...25,613,286
Ensembl chrNW_004955410:25,594,609...25,604,639 		JBrowse link
negative regulation of monocyte chemotactic protein-1 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apod apolipoprotein D involved_in ISO (PMID:18842892) UniProt PMID:18842892 NCBI chrNW_004955420:13,553,254...13,570,357
Ensembl chrNW_004955420:13,553,058...13,573,690 		JBrowse link
G C1qtnf3 C1q and TNF related 3 involved_in ISO (PMID:20739398) UniProt PMID:20739398 NCBI chrNW_004955426:19,588,637...19,606,557
Ensembl chrNW_004955426:19,585,460...19,606,557 		JBrowse link
G Cd24 CD24 molecule involved_in ISO (PMID:19264983) UniProt PMID:19264983 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Erbin erbb2 interacting protein involved_in ISO (PMID:16203728) UniProt PMID:16203728 NCBI chrNW_004955446:3,046,268...3,151,796
Ensembl chrNW_004955446:3,049,258...3,151,796 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO (PMID:18962899) BHF-UCL PMID:18962899 NCBI chrNW_004955422:17,914,228...17,916,918
Ensembl chrNW_004955422:17,914,305...17,917,428 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:18972444) UniProt PMID:18972444 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:24255059) BHF-UCL PMID:24255059 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389 		JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:25225333) UniProt PMID:25225333 NCBI chrNW_004955420:9,903,736...9,966,100
Ensembl chrNW_004955420:9,903,736...9,966,100 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004955406:37,420,019...37,465,588
Ensembl chrNW_004955406:37,419,856...37,465,655 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chrNW_004955476:11,611,240...11,619,210
Ensembl chrNW_004955476:11,611,240...11,619,780 		JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:12665594) UniProt PMID:12665594 NCBI chrNW_004955409:37,206,675...37,246,851
Ensembl chrNW_004955409:37,206,675...37,246,922 		JBrowse link
G C1qbp complement C1q binding protein involved_in ISO (PMID:10022843) UniProt PMID:10022843 NCBI chrNW_004955467:10,788,142...10,792,272
Ensembl chrNW_004955467:10,788,277...10,792,449 		JBrowse link
G Celf4 CUGBP Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A acts_upstream_of_or_within ISO (PMID:21470964) MGI PMID:21470964 NCBI chrNW_004955407:36,456,628...36,588,940
Ensembl chrNW_004955407:36,453,098...36,589,382 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 acts_upstream_of_or_within ISO (PMID:18480465) MGI PMID:18480465 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:22570490 RGD:9999428 NCBI chrNW_004955468:668,177...683,540
Ensembl chrNW_004955468:670,559...683,540 		JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:16376875) MGI PMID:16376875 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
G Pcbp4 poly(rC) binding protein 4 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955532:3,604,720...3,615,112
Ensembl chrNW_004955532:3,603,975...3,614,290 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:15009664)
(PMID:17679093)
(PMID:23636947)		 UniProt
ARUK-UCL
MGI		 PMID:15009664 PMID:17679093 PMID:23636947 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492 		JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955419:15,002,780...15,101,588
Ensembl chrNW_004955419:15,000,072...15,101,588 		JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955516:904,852...934,313
Ensembl chrNW_004955516:904,062...934,313 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO PMID:25573899
(PMID:27630136), (PMID:29895960), (PMID:33110103)
(PMID:24960161), (PMID:34732726)
PMID:23307558
PMID:35394688		 UniProt PMID:23307558 PMID:24960161 PMID:25573899 PMID:27630136 PMID:29895960 More... RGD:152025504 RGD:152025505 RGD:152025509 RGD:152025519 NCBI chrNW_004955485:590,094...769,604
Ensembl chrNW_004955485:586,373...769,635 		JBrowse link
G Rbm42 RNA binding motif protein 42 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chrNW_004955468:4,844,780...4,854,261
Ensembl chrNW_004955468:4,844,747...4,854,504 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO (PMID:12665594) UniProt PMID:12665594 NCBI chrNW_004955442:14,995,404...15,009,358
Ensembl chrNW_004955442:14,995,404...15,009,358 		JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:12665594) UniProt PMID:12665594 NCBI chrNW_004955497:1,862,026...1,869,974
Ensembl chrNW_004955497:1,867,771...1,869,974 		JBrowse link
G Sfswap splicing factor SWAP involved_in ISO PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chrNW_004955482:808,684...871,377
Ensembl chrNW_004955482:808,632...871,402 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:11684676) UniProt PMID:11684676 NCBI chrNW_004955452:3,831,545...3,846,292
Ensembl chrNW_004955452:3,831,552...3,846,449 		JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004955452:8,143,850...8,174,830
Ensembl chrNW_004955452:8,142,500...8,174,869 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004955445:13,663,474...13,669,102
Ensembl chrNW_004955445:13,661,209...13,669,102 		JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004955441:6,416,709...6,423,185
Ensembl chrNW_004955441:6,416,952...6,423,074 		JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004955455:11,175,760...11,183,597
Ensembl chrNW_004955455:11,175,760...11,183,597 		JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004955567:683,472...699,105
Ensembl chrNW_004955567:683,078...697,996 		JBrowse link
negative regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd96 CD96 molecule acts_upstream_of_or_within ISO (PMID:24658051) MGI PMID:24658051 NCBI chrNW_004955427:11,971,051...12,057,185
Ensembl chrNW_004955427:11,971,021...12,059,171 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955435:18,009,228...18,050,329
Ensembl chrNW_004955435:18,008,352...18,050,329 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955451:12,312,715...12,348,663
Ensembl chrNW_004955451:12,312,715...12,348,663 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chrNW_004955446:18,801,971...18,830,816
Ensembl chrNW_004955446:18,801,578...18,831,963 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:11051545), (PMID:19029303) ComplexPortal PMID:11051545 PMID:19029303 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938 		JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:19029303) ComplexPortal PMID:19029303 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chrNW_004955425:5,992,538...6,077,769
Ensembl chrNW_004955425:5,992,538...6,077,770 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chrNW_004955413:6,471,933...6,480,475
Ensembl chrNW_004955413:6,471,953...6,480,469 		JBrowse link
G Dhx34 DExH-box helicase 34 involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955574:1,248,058...1,267,399
Ensembl chrNW_004955574:1,248,021...1,267,399 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chrNW_004955408:2,060,288...2,064,998
Ensembl chrNW_004955408:2,060,829...2,065,416 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955487:8,894,403...9,073,535
Ensembl chrNW_004955487:8,894,187...9,073,663 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:18447585) UniProt PMID:18447585 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within ISO (PMID:24274065) MGI PMID:24274065 NCBI chrNW_004955515:2,697,370...2,729,425
Ensembl chrNW_004955515:2,698,075...2,730,074 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:12881431) ComplexPortal PMID:12881431 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938 		JBrowse link
G Upf3a UPF3A regulator of nonsense mediated mRNA decay involved_in ISO (PMID:27040500) MGI PMID:27040500 NCBI chrNW_004955404:25,556...36,730 JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955504:4,443,051...4,476,373
Ensembl chrNW_004955504:4,443,051...4,476,520 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347 		JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:18377426) UniProt PMID:18377426 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
negative regulation of plasminogen activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpb2 carboxypeptidase B2 ISO RGD PMID:23369837 RGD:7243115 NCBI chrNW_004955518:3,740,348...3,803,540
Ensembl chrNW_004955518:3,740,348...3,803,539 		JBrowse link
G Ctsz cathepsin Z involved_in ISO (PMID:19433310) CAFA PMID:19433310 NCBI chrNW_004955445:586,901...597,753
Ensembl chrNW_004955445:586,902...597,753 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:8508955)
(PMID:19855083)
(PMID:18835034), (PMID:19855083)		 BHF-UCL PMID:8508955 PMID:18835034 PMID:19855083 NCBI chrNW_004955456:16,147,523...16,157,040
Ensembl chrNW_004955456:16,145,944...16,157,142 		JBrowse link
G Serpine2 serpin family E member 2 involved_in ISO (PMID:19855083) BHF-UCL PMID:19855083 NCBI chrNW_004955453:10,049,822...10,076,155
Ensembl chrNW_004955453:10,027,104...10,076,645 		JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO (PMID:134998) BHF-UCL PMID:134998 NCBI chrNW_004955481:1,441,262...1,449,078
Ensembl chrNW_004955481:1,442,010...1,449,242 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:6438154) BHF-UCL PMID:6438154 NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419 		JBrowse link
negative regulation of post-transcriptional gene silencing by regulatory ncRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific acts_upstream_of_or_within ISO (PMID:15556947) MGI PMID:15556947 NCBI chrNW_004955545:1,078,319...1,106,938
Ensembl chrNW_004955545:1,078,319...1,106,938 		JBrowse link
negative regulation of pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcdin3d BCDIN3 domain containing RNA methyltransferase involved_in ISO (PMID:23063121) UniProt PMID:23063121 NCBI chrNW_004955547:427,127...432,482
Ensembl chrNW_004955547:427,432...432,455 		JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:21247876) UniProt PMID:21247876 NCBI chrNW_004955452:5,793,583...5,808,662
Ensembl chrNW_004955452:5,793,583...5,808,662 		JBrowse link
G Lin28b lin-28 homolog B involved_in ISO (PMID:18951094) CACAO PMID:18951094 NCBI chrNW_004955411:30,381,208...30,499,678 JBrowse link
negative regulation of primary miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 acts_upstream_of ISO (PMID:31507089) ARUK-UCL PMID:31507089 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Lin28b lin-28 homolog B involved_in ISO (PMID:18951094) CACAO PMID:18951094 NCBI chrNW_004955411:30,381,208...30,499,678 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:24636259 RGD:12789709 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:31507089) ARUK-UCL PMID:31507089 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687 		JBrowse link
negative regulation of protein processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp4 acid phosphatase 4 involved_in ISO (PMID:15219672) UniProt PMID:15219672 NCBI chrNW_004955559:481,953...488,464
Ensembl chrNW_004955559:483,071...486,592 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:17344476) MGI PMID:17344476 NCBI chrNW_004955484:7,782,409...7,861,082
Ensembl chrNW_004955484:7,782,772...7,860,967 		JBrowse link
G Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 involved_in ISO (PMID:22445366) UniProt PMID:22445366 NCBI chrNW_004955416:7,828,917...7,831,368
Ensembl chrNW_004955416:7,828,482...7,832,391 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO Casp3 RGD PMID:22817682 RGD:11566024 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Gas1 growth arrest specific 1 involved_in ISO (PMID:21357679) UniProt PMID:21357679 NCBI chrNW_004955432:727,784...729,096 JBrowse link
G Glg1 golgi glycoprotein 1 acts_upstream_of_or_within ISO (PMID:20530870) MGI PMID:20530870 NCBI chrNW_004955484:2,871,390...2,987,913
Ensembl chrNW_004955484:2,870,872...2,983,467 		JBrowse link
G Il1r2 interleukin 1 receptor type 2 acts_upstream_of_or_within ISO (PMID:23395675) MGI PMID:23395675 NCBI chrNW_004955470:7,518,565...7,562,219
Ensembl chrNW_004955470:7,518,663...7,559,470 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:21370995) ParkinsonsUK-UCL PMID:21370995 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923 		JBrowse link
G Mdm2 MDM2 proto-oncogene ISO caspase-3 RGD PMID:19638633 RGD:2317364 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808 		JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO Casp3 RGD PMID:21925170 RGD:9999170 NCBI chrNW_004955559:1,750,227...1,753,607
Ensembl chrNW_004955559:1,750,168...1,753,629 		JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22709416) UniProt PMID:22709416 NCBI chrNW_004955475:10,632,938...10,641,452
Ensembl chrNW_004955475:10,474,697...10,641,723 		JBrowse link
G Tmem98 transmembrane protein 98 involved_in ISO (PMID:30249802) UniProt PMID:30249802 NCBI chrNW_004955481:7,788,066...7,797,433
Ensembl chrNW_004955481:7,785,967...7,798,575 		JBrowse link
negative regulation of protein processing involved in protein targeting to mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt4 sirtuin 4 ISO RGD PMID:24029877 RGD:9586053 NCBI chrNW_004955455:11,322,812...11,334,786
Ensembl chrNW_004955455:11,324,479...11,334,817 		JBrowse link
negative regulation of rDNA heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phf2 PHD finger protein 2 involved_in ISO (PMID:20129925) UniProt PMID:20129925 NCBI chrNW_004955515:4,428,068...4,471,642
Ensembl chrNW_004955515:4,429,957...4,471,641 		JBrowse link
G Phf8 PHD finger protein 8 involved_in ISO (PMID:20208542) UniProt PMID:20208542 NCBI chrNW_004955475:1,105,619...1,230,758
Ensembl chrNW_004955475:1,105,619...1,230,756 		JBrowse link
negative regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 ISO RGD PMID:19116344 RGD:2313309 NCBI chrNW_004955578:950,258...1,004,438
Ensembl chrNW_004955578:967,593...1,004,438 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO (PMID:18335065) UniProt PMID:18335065 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492 		JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 involved_in ISO (PMID:18335065) RGD
UniProt		 PMID:18335065 PMID:18534753 RGD:10045970 NCBI chrNW_004955435:1,703,588...1,773,016
Ensembl chrNW_004955435:1,702,962...1,774,334 		JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 involved_in ISO (PMID:18335065) UniProt PMID:18335065 NCBI chrNW_004955419:15,002,780...15,101,588
Ensembl chrNW_004955419:15,000,072...15,101,588 		JBrowse link
G Rps13 ribosomal protein S13 involved_in ISO (PMID:17881366) UniProt PMID:17881366 NCBI chrNW_004955414:31,887,626...31,890,439
Ensembl chrNW_004955414:31,887,626...31,890,439 		JBrowse link
G Rps26 ribosomal protein S26 involved_in ISO (PMID:15716004) UniProt PMID:15716004 NCBI chrNW_004955458:3,632,675...3,634,565
Ensembl chrNW_004955458:3,632,699...3,634,566 		JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:19328063) ParkinsonsUK-UCL PMID:19328063 NCBI chrNW_004955547:335,344...358,503
Ensembl chrNW_004955547:335,275...358,503 		JBrowse link
negative regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:26867678) UniProt PMID:26867678 NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117 		JBrowse link
negative regulation of selenocysteine incorporation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO RGD PMID:19716792 PMID:21685449 RGD:10044260 RGD:10045552 NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873 		JBrowse link
negative regulation of T cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in ISO (PMID:15466453)
(PMID:23169781)		 UniProt PMID:15466453 PMID:23169781 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:11477403) UniProt PMID:11477403 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Smad7 SMAD family member 7 involved_in ISO (PMID:25642768) BHF-UCL PMID:25642768 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291 		JBrowse link
G Vsir V-set immunoregulatory receptor acts_upstream_of_or_within ISO (PMID:21383057) MGI PMID:21383057 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
negative regulation of T-helper 2 cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:19360123) UniProt PMID:19360123 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:23616576)
(PMID:10761931)		 UniProt PMID:10761931 PMID:23616576 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
negative regulation of transforming growth factor beta production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 involved_in ISO (PMID:25834989) UniProt PMID:25834989 NCBI chrNW_004955413:29,837,134...29,911,313
Ensembl chrNW_004955413:29,837,134...29,912,222 		JBrowse link
G Fn1 fibronectin 1 involved_in ISO (PMID:25834989) UniProt PMID:25834989 NCBI chrNW_004955457:629,599...694,948
Ensembl chrNW_004955457:629,518...696,975 		JBrowse link
G Il13 interleukin 13 ISO RGD PMID:20100461 RGD:4145466 NCBI chrNW_004955408:4,046,406...4,049,795 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:23994610) MGI PMID:23994610 NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647 		JBrowse link
negative regulation of transforming growth factor beta1 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd2ap CD2 associated protein acts_upstream_of_or_within ISO (PMID:21911934) MGI PMID:21911934 NCBI chrNW_004955437:12,005,399...12,087,014
Ensembl chrNW_004955437:11,983,311...12,091,100 		JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in ISO (PMID:15899807) BHF-UCL PMID:15899807 NCBI chrNW_004955416:14,915,031...14,947,634
Ensembl chrNW_004955416:14,936,546...14,949,252 		JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta involved_in ISO (PMID:26126825) UniProt PMID:26126825 NCBI chrNW_004955417:13,574,493...13,625,669
Ensembl chrNW_004955417:13,574,721...13,625,313 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISO (PMID:25159578) UniProt PMID:25159578 NCBI chrNW_004955414:15,166,349...15,178,284
Ensembl chrNW_004955414:15,166,349...15,178,284 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:25690660) ARUK-UCL PMID:25690660 NCBI chrNW_004955468:2,673,657...2,677,633
Ensembl chrNW_004955468:2,673,980...2,677,321 		JBrowse link
negative regulation of transforming growth factor beta3 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO (PMID:16930538) UniProt PMID:16930538 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
negative regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btg2 BTG anti-proliferation factor 2 involved_in ISO (PMID:23236473) UniProt PMID:23236473 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778 		JBrowse link
G Calr calreticulin involved_in ISO (PMID:14726956) BHF-UCL PMID:14726956 NCBI chrNW_004955415:31,985,147...31,989,372
Ensembl chrNW_004955415:31,985,147...31,989,372 		JBrowse link
G Caprin1 cell cycle associated protein 1 involved_in ISO PMID:20516077
(PMID:31439799), (PMID:34074792)		 UniProt PMID:20516077 PMID:31439799 PMID:34074792 RGD:8554681 NCBI chrNW_004955422:12,126,893...12,170,877 JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:23360795 RGD:9685152 NCBI chrNW_004955416:13,963,300...14,038,691
Ensembl chrNW_004955416:13,981,657...14,039,705 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:17024188)
(PMID:17024188), (PMID:26074071)
(PMID:22711986)		 MGI
UniProt		 PMID:17024188 PMID:22711986 PMID:26074071 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:30765518), (PMID:31439799) UniProt PMID:30765518 PMID:31439799 NCBI chrNW_004955597:326,601...397,112 JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:18995835) UniProt PMID:18995835 NCBI chrNW_004955432:29,925...254,327
Ensembl chrNW_004955432:29,197...254,379 		JBrowse link
G Dapk3 death associated protein kinase 3 involved_in ISO (PMID:18995835) UniProt PMID:18995835 NCBI chrNW_004955495:4,809,475...4,822,210
Ensembl chrNW_004955495:4,810,474...4,823,259 		JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:17667941) UniProt PMID:17667941 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220 		JBrowse link
G Ddx6 DEAD-box helicase 6 involved_in ISO (PMID:27342281) UniProt PMID:27342281 NCBI chrNW_004955412:19,854,785...19,889,422
Ensembl chrNW_004955412:19,854,785...19,889,426 		JBrowse link
G Dhfr dihydrofolate reductase involved_in ISO (PMID:8490020) CAFA PMID:8490020 NCBI chrNW_004955418:29,274,170...29,283,028 JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:24369427) UniProt PMID:24369427 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in ISO (PMID:12882984)
(PMID:12610133), (PMID:19189853)		 UniProt PMID:12610133 PMID:12882984 PMID:19189853 NCBI chrNW_004955441:4,908,318...4,944,343 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:10882126), (PMID:16176978)
(PMID:12610133)
(PMID:9930704)
(PMID:16176978)		 MGI
AgBase		 PMID:9930704 PMID:10882126 PMID:12610133 PMID:16176978 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 acts_upstream_of_or_within ISO (PMID:16176978) MGI PMID:16176978 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO (PMID:10523622) HGNC-UCL PMID:10523622 NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E acts_upstream_of_or_within ISO (PMID:25456498) MGI PMID:25456498 NCBI chrNW_004955405:9,122,960...9,159,095
Ensembl chrNW_004955405:9,122,228...9,159,711 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 acts_upstream_of_or_within ISO (PMID:22751931) MGI PMID:22751931 NCBI chrNW_004955453:3,395,483...3,424,649
Ensembl chrNW_004955453:3,395,483...3,424,649 		JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 involved_in ISO (PMID:9453748) DisProt PMID:9453748 NCBI chrNW_004955463:13,702,434...13,720,875
Ensembl chrNW_004955463:13,702,434...13,720,875 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:16157702)
(PMID:25456498)
(PMID:24335285), (PMID:27342281)		 UniProt
MGI		 PMID:16157702 PMID:24335285 PMID:25456498 PMID:27342281 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104 		JBrowse link
G Enc1 ectodermal-neural cortex 1 involved_in ISO (PMID:19424503) UniProt PMID:19424503 NCBI chrNW_004955425:26,017,684...26,029,262
Ensembl chrNW_004955425:26,017,684...26,029,262 		JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in ISO (PMID:23071094)
(PMID:15479637)		 UniProt PMID:15479637 PMID:23071094 NCBI chrNW_004955520:3,550,558...3,606,015
Ensembl chrNW_004955520:3,550,558...3,606,697 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:12417522), (PMID:30765518), (PMID:31439799)
(PMID:27666021)
(PMID:14613971)		 UniProt
CACAO		 PMID:12417522 PMID:14613971 PMID:27666021 PMID:30765518 PMID:31439799 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:25456134) UniProt PMID:25456134 NCBI chrNW_004955420:9,903,736...9,966,100
Ensembl chrNW_004955420:9,903,736...9,966,100 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:23071094)
(PMID:15479637)		 UniProt PMID:15479637 PMID:23071094 NCBI chrNW_004955413:4,162,467...4,166,783
Ensembl chrNW_004955413:4,162,467...4,166,783 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within ISO (PMID:22751931) MGI PMID:22751931 NCBI chrNW_004955453:3,201,593...3,301,541
Ensembl chrNW_004955453:3,203,358...3,301,547 		JBrowse link
G Grb7 growth factor receptor bound protein 7 involved_in ISO (PMID:18273060) UniProt PMID:18273060 NCBI chrNW_004955451:14,463,032...14,470,392
Ensembl chrNW_004955451:14,464,541...14,474,070 		JBrowse link
G Ifrd2 interferon related developmental regulator 2 involved_in ISO (PMID:30355441) UniProt PMID:30355441 NCBI chrNW_004955532:2,101,202...2,106,779
Ensembl chrNW_004955532:2,101,202...2,104,104 		JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:9891060) BHF-UCL PMID:9891060 NCBI chrNW_004955451:12,312,715...12,348,663
Ensembl chrNW_004955451:12,312,715...12,348,663 		JBrowse link
G Igf2bp2 insulin like growth factor 2 mRNA binding protein 2 involved_in ISO (PMID:25863250) MGI PMID:25863250 NCBI chrNW_004955420:21,818,970...21,957,295
Ensembl chrNW_004955420:21,818,972...21,958,440 		JBrowse link
G Igfbp5 insulin like growth factor binding protein 5 involved_in ISO (PMID:15700281) BHF-UCL PMID:15700281 NCBI chrNW_004955453:16,530,110...16,550,733
Ensembl chrNW_004955453:16,530,110...16,550,733 		JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in ISO (PMID:21123651) UniProt PMID:21123651 NCBI chrNW_004955495:1,814,012...1,844,605
Ensembl chrNW_004955495:1,827,860...1,844,369 		JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E ISO RGD PMID:21436142 RGD:12911213 NCBI chrNW_004955513:4,304,483...4,313,087
Ensembl chrNW_004955513:4,304,483...4,313,087 		JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:7523370 RGD:12910701 NCBI chrNW_004955450:852,554...898,908
Ensembl chrNW_004955450:852,554...900,011 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091) UniProt PMID:25940091 NCBI chrNW_004955408:9,002,443...9,080,938
Ensembl chrNW_004955408:9,002,458...9,080,938 		JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:23102813) UniProt PMID:23102813 NCBI chrNW_004955452:5,793,583...5,808,662
Ensembl chrNW_004955452:5,793,583...5,808,662 		JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor involved_in ISO (PMID:29510985) UniProt PMID:29510985 NCBI chrNW_004955468:3,799,897...3,863,241 JBrowse link
G Mvk mevalonate kinase ISO RGD PMID:16263716 RGD:1600527 NCBI chrNW_004955455:8,933,250...8,953,883
Ensembl chrNW_004955455:8,930,125...8,953,894 		JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955431:23,538,224...23,540,039
Ensembl chrNW_004955431:23,538,242...23,539,051 		JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955574:333,007...333,529
Ensembl chrNW_004955574:333,116...333,529 		JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004955415:32,648,455...32,651,909
Ensembl chrNW_004955415:32,649,054...32,651,936 		JBrowse link
G Ncl nucleolin involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004955453:4,154,627...4,164,253
Ensembl chrNW_004955453:4,154,627...4,164,253 		JBrowse link
G Otud6b OTU deubiquitinase 6B involved_in ISO (PMID:27864334) UniProt PMID:27864334 NCBI chrNW_004955417:7,844,311...7,859,032
Ensembl chrNW_004955417:7,844,292...7,858,658 		JBrowse link
G Paip2 poly(A) binding protein interacting protein 2 acts_upstream_of_or_within ISO (PMID:23622065) MGI PMID:23622065 NCBI chrNW_004955418:1,189,822...1,208,559
Ensembl chrNW_004955418:1,189,822...1,208,559 		JBrowse link
G Pcif1 phosphorylated CTD interacting factor 1 involved_in ISO (PMID:31279659) UniProt PMID:31279659 NCBI chrNW_004955445:11,355,227...11,368,392
Ensembl chrNW_004955445:11,355,227...11,368,392 		JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:16556598 RGD:1582336 NCBI chrNW_004955478:5,686,639...6,090,356
Ensembl chrNW_004955478:5,686,640...6,083,967 		JBrowse link
G Prkch protein kinase C eta involved_in ISO (PMID:34593629)
(PMID:19797084)		 UniProt PMID:19797084 PMID:34593629 NCBI chrNW_004955466:8,178,323...8,393,446
Ensembl chrNW_004955466:8,176,876...8,393,446 		JBrowse link
G Pus7 pseudouridine synthase 7 involved_in ISO (PMID:29628141)
(PMID:35144859)		 UniProt PMID:29628141 PMID:35144859 NCBI chrNW_004955410:10,062,768...10,119,751
Ensembl chrNW_004955410:10,060,071...10,119,757 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:31829086)
(PMID:31868295)
(PMID:20956316), (PMID:21253564), (PMID:29021242)		 UniProt PMID:20956316 PMID:21253564 PMID:29021242 PMID:31829086 PMID:31868295 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO PMID:15340087 UniProt PMID:15340087 RGD:8553695 NCBI chrNW_004955530:78,488...83,297
Ensembl chrNW_004955530:78,426...83,297 		JBrowse link
G Rara retinoic acid receptor alpha ISO RGD PMID:19073915 RGD:2314253 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134 		JBrowse link
G Rgs2 regulator of G protein signaling 2 ISO RGD PMID:24576550 RGD:13524571 NCBI chrNW_004955406:30,261,757...30,265,389
Ensembl chrNW_004955406:30,261,757...30,266,005 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog ISO RGD PMID:10400702 RGD:9685547 NCBI chrNW_004955417:13,810,596...13,822,982
Ensembl chrNW_004955417:13,810,596...13,822,982 		JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:20068067) UniProt PMID:20068067 NCBI chrNW_004955540:3,140,649...3,153,546
Ensembl chrNW_004955540:3,140,649...3,153,546 		JBrowse link
G Rpl13a ribosomal protein L13a involved_in ISO (PMID:15479637)
(PMID:23071094)
(PMID:14567916), (PMID:23071094)		 UniProt PMID:14567916 PMID:15479637 PMID:23071094 NCBI chrNW_004955559:1,358,479...1,362,663
Ensembl chrNW_004955559:1,358,486...1,362,663 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:20217897) UniProt PMID:20217897 NCBI chrNW_004955414:16,436,899...16,442,325
Ensembl chrNW_004955414:16,436,899...16,443,073 		JBrowse link
G Serbp1 SERPINE1 mRNA binding protein 1 involved_in ISO (PMID:36691768)
(PMID:34815424)		 UniProt PMID:34815424 PMID:36691768 NCBI chrNW_004955423:23,763,356...23,774,816
Ensembl chrNW_004955423:23,762,916...23,774,160 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:10995219) CAFA PMID:10995219 NCBI chrNW_004955478:10,972,791...11,001,535
Ensembl chrNW_004955478:10,978,139...11,001,202 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:15479637)
(PMID:23071094)		 UniProt PMID:15479637 PMID:23071094 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938 		JBrowse link
G Tia1 TIA1 cytotoxic granule associated RNA binding protein acts_upstream_of_or_within
involved_in		 ISO (PMID:10921895)
(PMID:16227602)		 MGI
UniProt		 PMID:10921895 PMID:16227602 NCBI chrNW_004955424:14,887,722...14,920,844
Ensembl chrNW_004955424:14,887,659...14,921,588 		JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:23236473) UniProt PMID:23236473 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) CACAO PMID:23125361 NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432 		JBrowse link
G Tyms thymidylate synthetase involved_in ISO (PMID:1924359) CAFA PMID:1924359 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:19911006) MGI PMID:19911006 NCBI chrNW_004955514:3,902,508...3,924,281
Ensembl chrNW_004955514:3,902,454...3,924,610 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (PMID:7588596) UniProt PMID:7588596 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 ISO RGD PMID:25797256 RGD:11085566 NCBI chrNW_004955508:3,441,540...3,561,896
Ensembl chrNW_004955508:3,441,683...3,561,805 		JBrowse link
G Ybx2 Y-box binding protein 2 acts_upstream_of_or_within ISO (PMID:15665108) MGI PMID:15665108 NCBI chrNW_004955467:9,624,506...9,629,904
Ensembl chrNW_004955467:9,624,019...9,629,904 		JBrowse link
G Zar1l zygote arrest 1 like involved_in ISO (PMID:31598710) UniProt PMID:31598710 NCBI chrNW_004955431:13,532,795...13,541,771
Ensembl chrNW_004955431:13,532,795...13,541,682 		JBrowse link
negative regulation of translation in response to endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:9930704) ParkinsonsUK-UCL PMID:9930704 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:32610081) UniProt PMID:32610081 NCBI chrNW_004955449:1,976,186...2,139,044 JBrowse link
G Sesn2 sestrin 2 involved_in ISO (PMID:24947615) UniProt PMID:24947615 NCBI chrNW_004955452:7,392,644...7,417,204
Ensembl chrNW_004955452:7,393,007...7,417,304 		JBrowse link
negative regulation of translation in response to oxidative stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pml PML nuclear body scaffold involved_in ISO (PMID:16915281) UniProt PMID:16915281 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406 		JBrowse link
negative regulation of translation in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO RGD PMID:9819435 RGD:70729 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593 		JBrowse link
negative regulation of translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 acts_upstream_of_or_within ISO (PMID:22157746) MGI PMID:22157746 NCBI chrNW_004955480:8,853,449...8,906,859 JBrowse link
negative regulation of translational frameshifting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO (PMID:30682371) UniProt PMID:30682371 NCBI chrNW_004955495:1,431,677...1,437,035
Ensembl chrNW_004955495:1,431,023...1,440,821 		JBrowse link
negative regulation of translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:17524464), (PMID:19801630) UniProt PMID:17524464 PMID:19801630 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Bank1 B cell scaffold protein with ankyrin repeats 1 acts_upstream_of_or_within ISO (PMID:24227780) MGI PMID:24227780 NCBI chrNW_004955496:6,267,618...6,511,195
Ensembl chrNW_004955496:6,267,551...6,470,948 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (PMID:16601681) UniProt PMID:16601681 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 involved_in ISO (PMID:32726578), (PMID:35878012) UniProt PMID:32726578 PMID:35878012 NCBI chrNW_004955453:3,395,483...3,424,649
Ensembl chrNW_004955453:3,395,483...3,424,649 		JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:16142217)
(PMID:22578813)		 RGD
MGI
UniProt		 PMID:11865047 PMID:16142217 PMID:22578813 RGD:1625627 NCBI chrNW_004955463:13,702,434...13,720,875
Ensembl chrNW_004955463:13,702,434...13,720,875 		JBrowse link
G Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 involved_in ISO (PMID:30765518)
(PMID:16237163), (PMID:20347422), (PMID:23172145)		 UniProt PMID:16237163 PMID:20347422 PMID:23172145 PMID:30765518 NCBI chrNW_004955437:20,844,750...20,879,874
Ensembl chrNW_004955437:20,844,750...20,879,885 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:18805096) UniProt PMID:18805096 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:32726578), (PMID:35878012) UniProt PMID:32726578 PMID:35878012 NCBI chrNW_004955453:3,201,593...3,301,541
Ensembl chrNW_004955453:3,203,358...3,301,547 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:28379136) UniProt PMID:28379136 NCBI chrNW_004955408:9,002,443...9,080,938
Ensembl chrNW_004955408:9,002,458...9,080,938 		JBrowse link
G Paip2 poly(A) binding protein interacting protein 2 involved_in ISO (PMID:11172725) UniProt PMID:11172725 NCBI chrNW_004955418:1,189,822...1,208,559
Ensembl chrNW_004955418:1,189,822...1,208,559 		JBrowse link
G Paip2b poly(A) binding protein interacting protein 2B involved_in ISO (PMID:16804161) HGNC-UCL PMID:16804161 NCBI chrNW_004955424:14,157,358...14,190,865
Ensembl chrNW_004955424:14,156,768...14,190,865 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (PMID:34535749) UniProt PMID:34535749 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO (PMID:21613532) UniProt PMID:21613532 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989 		JBrowse link
G Znf598 zinc finger protein 598, E3 ubiquitin ligase involved_in ISO (PMID:28065601) UniProt PMID:28065601 NCBI chrNW_004955442:15,253,649...15,265,420
Ensembl chrNW_004955442:15,252,927...15,269,087 		JBrowse link
negative regulation of translational initiation in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (PMID:12176355) UniProt PMID:12176355 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965 		JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISO (PMID:12176355) UniProt PMID:12176355 NCBI chrNW_004955466:2,838,785...2,855,443
Ensembl chrNW_004955466:2,838,785...2,855,172 		JBrowse link
negative regulation of tumor necrosis factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within ISO (PMID:11168643) MGI PMID:11168643 NCBI chrNW_004955495:2,418,113...2,421,181
Ensembl chrNW_004955495:2,418,364...2,421,538 		JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISO (PMID:10961870) BHF-UCL PMID:10961870 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402 		JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:11096136 RGD:8548521 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980 		JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in ISO (PMID:19531803) UniProt PMID:19531803 NCBI chrNW_004955495:7,874,655...7,893,209
Ensembl chrNW_004955495:7,874,746...7,892,944 		JBrowse link
G Arg2 arginase 2 involved_in ISO (PMID:28614294)
(PMID:27074721)		 UniProt PMID:27074721 PMID:28614294 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G Arrb2 arrestin beta 2 involved_in ISO (PMID:16378096) UniProt PMID:16378096 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022 		JBrowse link
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Bcl3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:15465827) MGI PMID:15465827 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466 		JBrowse link
G Bpi bactericidal permeability increasing protein involved_in ISO (PMID:8409400) BHF-UCL PMID:8409400 NCBI chrNW_004955445:18,393,854...18,433,948
Ensembl chrNW_004955445:18,391,215...18,427,980 		JBrowse link
G C5ar2 complement C5a receptor 2 involved_in ISO (PMID:16204243) UniProt PMID:16204243 NCBI chrNW_004955574:1,221,950...1,242,547 JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955495:5,561,359...5,571,945
Ensembl chrNW_004955495:5,561,979...5,571,682 		JBrowse link
G Cd24 CD24 molecule involved_in ISO (PMID:19264983) UniProt PMID:19264983 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in
acts_upstream_of_or_within		 ISO (PMID:12508119)
(PMID:12508119), (PMID:16785311)		 MGI PMID:12508119 PMID:16785311 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700 		JBrowse link
G Cidea cell death inducing DFFA like effector a involved_in ISO (PMID:15919794) BHF-UCL PMID:15919794 NCBI chrNW_004955402:1,090,372...1,096,621
Ensembl chrNW_004955402:1,090,518...1,096,569 		JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO (PMID:10652441) ARUK-UCL PMID:10652441 NCBI chrNW_004955433:15,023,272...15,034,650
Ensembl chrNW_004955433:15,023,050...15,034,711 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of ISO (PMID:26435691) ARUK-UCL PMID:26435691 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Elf4 E74 like ETS transcription factor 4 involved_in ISO (PMID:35266071) UniProt PMID:35266071 NCBI chrNW_004955473:4,934,770...4,986,283
Ensembl chrNW_004955473:4,942,385...4,986,433 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 ISO RGD PMID:19204184 RGD:9685562 NCBI chrNW_004955486:4,941,143...4,955,693
Ensembl chrNW_004955486:4,941,143...4,955,693 		JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904) MGI PMID:20457904 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384) MGI PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:15548538) UniProt PMID:15548538 NCBI chrNW_004955420:9,903,736...9,966,100
Ensembl chrNW_004955420:9,903,736...9,966,100 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:19657094), (PMID:20103767) UniProt PMID:19657094 PMID:20103767 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809 		JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO RGD PMID:32428552 RGD:405878062 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:15232612) RGD
UniProt		 PMID:15232612 PMID:19620309 RGD:12905041 NCBI chrNW_004955561:1,676,475...1,682,205
Ensembl chrNW_004955561:1,676,576...1,681,812 		JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in ISO (PMID:15232612) RGD
UniProt		 PMID:15232612 PMID:17911350 RGD:12907501 NCBI chrNW_004955420:2,483,173...2,486,414
Ensembl chrNW_004955420:2,478,877...2,487,215 		JBrowse link
G Gpnmb glycoprotein nmb involved_in ISO (PMID:17475886) CACAO PMID:17475886 NCBI chrNW_004955410:25,554,279...25,583,368
Ensembl chrNW_004955410:25,553,973...25,582,500 		JBrowse link
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO (PMID:25348153) MGI PMID:25348153 NCBI chrNW_004955404:11,293,897...11,321,072
Ensembl chrNW_004955404:11,293,897...11,321,072 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO (PMID:18962899)
(PMID:16023107), (PMID:18962899)		 BHF-UCL PMID:16023107 PMID:18962899 NCBI chrNW_004955422:17,914,228...17,916,918
Ensembl chrNW_004955422:17,914,305...17,917,428 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:25578313) UniProt PMID:25578313 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Hdac3 histone deacetylase 3 ISO RGD PMID:22772764 RGD:9590127 NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234 		JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO (PMID:10545106) MGI PMID:10545106 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351 		JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:27277332) ARUK-UCL PMID:27277332 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152 		JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within ISO (PMID:12452830) RGD
MGI		 PMID:12452830 PMID:17017555 RGD:1598631 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Il27ra interleukin 27 receptor subunit alpha involved_in ISO (PMID:22927332) BHF-UCL PMID:22927332 NCBI chrNW_004955415:32,749,682...32,762,532
Ensembl chrNW_004955415:32,749,094...32,761,882 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains involved_in ISO (PMID:29802199) UniProt PMID:29802199 NCBI chrNW_004955437:2,697,998...2,769,998
Ensembl chrNW_004955437:2,694,945...2,769,998 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (PMID:15728517)
(PMID:12150927)		 BHF-UCL PMID:12150927 PMID:15728517 NCBI chrNW_004955458:12,839,995...12,880,285
Ensembl chrNW_004955458:12,846,237...12,879,316 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25578313) UniProt PMID:25578313 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955437:90,623...100,918
Ensembl chrNW_004955437:90,577...100,918 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:22863753) CACAO PMID:22863753 NCBI chrNW_004955442:13,795,322...13,834,362
Ensembl chrNW_004955442:13,814,434...13,833,222 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:19139201) MGI PMID:19139201 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:21242261)
(PMID:18972444)		 UniProt PMID:18972444 PMID:21242261 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751 		JBrowse link
G Orm1 orosomucoid 1 involved_in ISO (PMID:23973664) CACAO PMID:23973664 NCBI chrNW_004955419:13,262,119...13,264,986 JBrowse link
G Pomc proopiomelanocortin involved_in ISO (PMID:10233018) BHF-UCL PMID:10233018 NCBI chrNW_004955469:7,217,233...7,220,401
Ensembl chrNW_004955469:7,217,363...7,220,386 		JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:15560120 RGD:10043380 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106) UniProt PMID:23991106 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 involved_in ISO (PMID:17954568) ARUK-UCL PMID:17954568 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177 		JBrowse link
G Rad21 RAD21 cohesin complex component ISO RGD PMID:36538854 RGD:243065265 NCBI chrNW_004955417:22,941,549...22,966,395
Ensembl chrNW_004955417:22,941,479...22,966,837 		JBrowse link
G Rara retinoic acid receptor alpha involved_in ISO (PMID:18416830) BHF-UCL PMID:18416830 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134 		JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:16227999) BHF-UCL PMID:16227999 NCBI chrNW_004955416:28,152,984...28,162,173
Ensembl chrNW_004955416:28,153,460...28,162,095 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (PMID:17954568) ARUK-UCL PMID:17954568 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
G Sirt1 sirtuin 1 ISO RGD PMID:19299582 RGD:9585771 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:16317102) UniProt PMID:16317102 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Syt11 synaptotagmin 11 involved_in ISO (PMID:23303671), (PMID:25063865)
(PMID:28686317)		 ParkinsonsUK-UCL
UniProt		 PMID:23303671 PMID:25063865 PMID:28686317 NCBI chrNW_004955545:2,054,720...2,074,526
Ensembl chrNW_004955545:2,054,721...2,074,526 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:14568985) UniProt PMID:14568985 NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (PMID:20051628) BHF-UCL PMID:20051628 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chrNW_004955443:8,401,461...8,427,175
Ensembl chrNW_004955443:8,422,534...8,424,942 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:21088135) BHF-UCL PMID:21088135 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:28592261) UniProt PMID:28592261 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697 		JBrowse link
G Trim27 tripartite motif containing 27 involved_in ISO (PMID:22128329) UniProt PMID:22128329 NCBI chrNW_004955465:13,891,001...13,902,767
Ensembl chrNW_004955465:13,890,900...13,903,016 		JBrowse link
G Tspo translocator protein ISO RGD PMID:14678758 RGD:2317158 NCBI chrNW_004955413:28,309,105...28,315,075
Ensembl chrNW_004955413:28,308,658...28,315,075 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004955542:1,959,765...2,000,665
Ensembl chrNW_004955542:1,959,765...2,000,665 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:18178554)
(PMID:21616078)		 BHF-UCL
UniProt		 PMID:18178554 PMID:21616078 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
negative regulation of tumor necrosis factor superfamily cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 molecule involved_in ISO (PMID:24187568) UniProt PMID:24187568 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
negative regulation of type I interferon production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450) UniProt PMID:23609450 NCBI chrNW_004955404:30,254,934...30,266,898
Ensembl chrNW_004955404:30,254,841...30,270,921 		JBrowse link
G Atg12 autophagy related 12 involved_in ISO (PMID:17709747) ComplexPortal PMID:17709747 NCBI chrNW_004955408:35,607,541...35,620,878
Ensembl chrNW_004955408:35,607,541...35,620,878 		JBrowse link
G Atg5 autophagy related 5 involved_in ISO (PMID:17709747) ComplexPortal PMID:17709747 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827 		JBrowse link
G Banf1 barrier to autointegration nuclear assembly factor 1 involved_in ISO (PMID:32792394) UniProt PMID:32792394 NCBI chrNW_004955422:19,337,038...19,338,824
Ensembl chrNW_004955422:19,337,038...19,338,824 		JBrowse link
G Cul3 cullin 3 involved_in ISO (PMID:36394357) UniProt PMID:36394357 NCBI chrNW_004955453:9,546,554...9,629,976
Ensembl chrNW_004955453:9,564,522...9,629,976 		JBrowse link
G Ddx56 DEAD-box helicase 56 involved_in ISO (PMID:31340999) UniProt PMID:31340999 NCBI chrNW_004955456:7,505,260...7,513,225
Ensembl chrNW_004955456:7,505,260...7,513,424 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:21525357) UniProt PMID:21525357 NCBI chrNW_004955451:16,186,263...16,191,928
Ensembl chrNW_004955451:16,185,510...16,191,719 		JBrowse link
G Gpatch3 G-patch domain containing 3 involved_in ISO (PMID:28414768) UniProt PMID:28414768 NCBI chrNW_004955452:6,234,241...6,241,949
Ensembl chrNW_004955452:6,234,241...6,241,991 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) UniProt PMID:22842346 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains involved_in ISO (PMID:29802199) UniProt PMID:29802199 NCBI chrNW_004955437:2,697,998...2,769,998
Ensembl chrNW_004955437:2,694,945...2,769,998 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:32715615), (PMID:34467632)
(PMID:21633090), (PMID:33510463)		 UniProt PMID:21633090 PMID:32715615 PMID:33510463 PMID:34467632 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Klhl22 kelch like family member 22 involved_in ISO (PMID:36394357) UniProt PMID:36394357 NCBI chrNW_004955442:19,010,971...19,051,300
Ensembl chrNW_004955442:19,009,155...19,051,393 		JBrowse link
G Nmi N-myc and STAT interactor acts_upstream_of_or_within ISO (PMID:23956435) MGI PMID:23956435 NCBI chrNW_004955440:16,850,469...16,877,295
Ensembl chrNW_004955440:16,848,108...16,877,674 		JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in ISO (PMID:26471729) UniProt PMID:26471729 NCBI chrNW_004955506:1,451,337...1,513,455
Ensembl chrNW_004955506:1,451,337...1,513,455 		JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23042151) MGI PMID:23042151 NCBI chrNW_004955422:18,868,696...18,877,826
Ensembl chrNW_004955422:18,868,696...18,877,438 		JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in ISO (PMID:26358190) UniProt PMID:26358190 NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:31829086), (PMID:34428287) UniProt PMID:31829086 PMID:34428287 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:36394357) UniProt PMID:36394357 NCBI chrNW_004955413:26,579,759...26,592,980
Ensembl chrNW_004955413:26,579,759...26,592,980 		JBrowse link
G Rnf125 ring finger protein 125 involved_in ISO (PMID:17460044), (PMID:26471729) UniProt PMID:17460044 PMID:26471729 NCBI chrNW_004955402:19,276,157...19,310,605
Ensembl chrNW_004955402:19,295,809...19,309,987 		JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:26358190) UniProt PMID:26358190 NCBI chrNW_004955415:14,539,284...14,560,614
Ensembl chrNW_004955415:14,536,266...14,560,632 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 involved_in ISO (PMID:22079989) CACAO PMID:22079989 NCBI chrNW_004955542:2,264,472...2,301,083
Ensembl chrNW_004955542:2,265,901...2,301,215 		JBrowse link
G Trim27 tripartite motif containing 27 involved_in ISO (PMID:26358190) UniProt PMID:26358190 NCBI chrNW_004955465:13,891,001...13,902,767
Ensembl chrNW_004955465:13,890,900...13,903,016 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:26358190) UniProt PMID:26358190 NCBI chrNW_004955468:2,673,657...2,677,633
Ensembl chrNW_004955468:2,673,980...2,677,321 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in ISO (PMID:26471729) UniProt PMID:26471729 NCBI chrNW_004955442:18,548,545...18,568,989
Ensembl chrNW_004955442:18,548,545...18,569,366 		JBrowse link
G Xaf1 XIAP associated factor 1 involved_in ISO (PMID:36394357) UniProt PMID:36394357 NCBI chrNW_004955467:12,240,075...12,257,595 JBrowse link
negative regulation of type II interferon production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase involved_in ISO (PMID:18840707) UniProt PMID:18840707 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G C1qbp complement C1q binding protein involved_in ISO (PMID:17881511) UniProt PMID:17881511 NCBI chrNW_004955467:10,788,142...10,792,272
Ensembl chrNW_004955467:10,788,277...10,792,449 		JBrowse link
G Cd274 CD274 molecule involved_in ISO (PMID:12538684), (PMID:24187568) UniProt PMID:12538684 PMID:24187568 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Cd276 CD276 molecule acts_upstream_of_or_within ISO (PMID:12925852) MGI PMID:12925852 NCBI chrNW_004955450:3,884,437...3,896,416 JBrowse link
G Cd96 CD96 molecule acts_upstream_of_or_within ISO (PMID:24658051) MGI PMID:24658051 NCBI chrNW_004955427:11,971,051...12,057,185
Ensembl chrNW_004955427:11,971,021...12,059,171 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 acts_upstream_of ISO (PMID:24038088) ARUK-UCL PMID:24038088 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:15466453)
(PMID:17377532)
(PMID:18368049)
(PMID:16769892), (PMID:17028180)
(PMID:16275384)
(PMID:23169781)		 UniProt
MGI		 PMID:15466453 PMID:16275384 PMID:16769892 PMID:17028180 PMID:17377532 More... NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:18840707) UniProt PMID:18840707 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:18792410)
(PMID:20399120)		 MGI PMID:18792410 PMID:20399120 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:26492563)
(PMID:14556006)		 UniProt PMID:14556006 PMID:26492563 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:22473704) UniProt PMID:22473704 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Ifnb1 interferon beta 1 ISO RGD PMID:10494101 RGD:401854240 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within ISO (PMID:12452830) MGI PMID:12452830 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Il1rl1 interleukin 1 receptor like 1 involved_in ISO (PMID:18268038) BHF-UCL PMID:18268038 NCBI chrNW_004955470:7,779,828...7,849,157 JBrowse link
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of_or_within ISO (PMID:19124723) MGI PMID:19124723 NCBI chrNW_004955501:1,826,687...1,863,261 JBrowse link
G Il33 interleukin 33 involved_in ISO (PMID:18268038) BHF-UCL PMID:18268038 NCBI chrNW_004955434:10,145,449...10,187,595
Ensembl chrNW_004955434:10,171,812...10,188,948 		JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in ISO (PMID:23147407) UniProt PMID:23147407 NCBI chrNW_004955470:1,209,389...1,214,730
Ensembl chrNW_004955470:1,209,325...1,214,821 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:18806793) UniProt PMID:18806793 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:18619870) ARUK-UCL PMID:18619870 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23408620)
(PMID:23242525)		 UniProt PMID:23242525 PMID:23408620 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 acts_upstream_of_or_within ISO (PMID:30248149) MGI PMID:30248149 NCBI chrNW_004955476:11,755,489...11,762,781 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15220916)
(PMID:19139201)		 MGI PMID:15220916 PMID:19139201 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:21242261)
(PMID:18972444)		 UniProt PMID:18972444 PMID:21242261 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751 		JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in ISO (PMID:12538684) UniProt PMID:12538684 NCBI chrNW_004955434:9,540,047...9,559,335 JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955495:7,785,398...7,792,158
Ensembl chrNW_004955495:7,785,193...7,796,210 		JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955592:100,022...111,609
Ensembl chrNW_004955592:100,088...111,610 		JBrowse link
G Prnp prion protein (Kanno blood group) involved_in ISO (PMID:20145049) BHF-UCL PMID:20145049 NCBI chrNW_004955415:15,442,313...15,454,644
Ensembl chrNW_004955415:15,442,313...15,454,644 		JBrowse link
G Rara retinoic acid receptor alpha involved_in ISO (PMID:18416830) BHF-UCL PMID:18416830 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (PMID:15356574) MGI PMID:15356574 NCBI chrNW_004955599:688,414...690,644 JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:11477403) UniProt PMID:11477403 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (PMID:20051628) BHF-UCL PMID:20051628 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:9670042) BHF-UCL PMID:9670042 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:21616078) UniProt PMID:21616078 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
G Znf683 zinc finger protein 683 involved_in ISO (PMID:26179882) UniProt PMID:26179882 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
negative regulation of vascular endothelial growth factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt1 fms related receptor tyrosine kinase 1 ISO RGD PMID:23804076 RGD:10402115 NCBI chrNW_004955497:7,653,309...7,831,737
Ensembl chrNW_004955497:7,653,248...7,831,472 		JBrowse link
G Nutf2 nuclear transport factor 2 ISO RGD PMID:19404486 RGD:9831377 NCBI chrNW_004955484:8,832,871...8,854,151
Ensembl chrNW_004955484:8,832,871...8,854,135 		JBrowse link
G Sars1 seryl-tRNA synthetase 1 involved_in ISO (PMID:24940000) UniProt PMID:24940000 NCBI chrNW_004955435:12,642,485...12,659,833
Ensembl chrNW_004955435:12,641,776...12,660,682 		JBrowse link
nuclear histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssb small RNA binding exonuclease protection factor La involved_in ISO (PMID:9154801) CAFA PMID:9154801 NCBI chrNW_004955449:4,806,468...4,815,175 JBrowse link
nuclear mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dxo decapping exoribonuclease involved_in ISO (PMID:23523372) UniProt PMID:23523372 NCBI chrNW_004955437:482,866...484,989
Ensembl chrNW_004955437:481,554...484,989 		JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:17545563), (PMID:20699273) UniProt PMID:17545563 PMID:20699273 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955454:2,732,308...2,734,398
Ensembl chrNW_004955454:2,732,308...2,734,398 		JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955428:18,732,733...18,743,743
Ensembl chrNW_004955428:18,731,919...18,743,756 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955508:3,441,540...3,561,896
Ensembl chrNW_004955508:3,441,683...3,561,805 		JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16934922) UniProt PMID:16934922 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992 		JBrowse link
nuclear-transcribed mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:23788676) UniProt PMID:23788676 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358 		JBrowse link
G Dhx34 DExH-box helicase 34 involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955574:1,248,058...1,267,399
Ensembl chrNW_004955574:1,248,021...1,267,399 		JBrowse link
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO (PMID:23756462) UniProt PMID:23756462 NCBI chrNW_004955453:3,558,744...3,851,222
Ensembl chrNW_004955453:3,559,067...3,830,064 		JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876 		JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955454:2,732,308...2,734,398
Ensembl chrNW_004955454:2,732,308...2,734,398 		JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955428:18,732,733...18,743,743
Ensembl chrNW_004955428:18,731,919...18,743,756 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955487:8,894,403...9,073,535
Ensembl chrNW_004955487:8,894,187...9,073,663 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:15039777 RGD:10045958 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:25026078)
(PMID:20639877)		 UniProt
BHF-UCL		 PMID:20639877 PMID:25026078 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:20123736) UniProt PMID:20123736 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chrNW_004955508:3,441,540...3,561,896
Ensembl chrNW_004955508:3,441,683...3,561,805 		JBrowse link
nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Skic2 SKI2 subunit of superkiller complex involved_in ISO (PMID:32006463), (PMID:35120588) UniProt PMID:32006463 PMID:35120588 NCBI chrNW_004955437:473,192...482,811
Ensembl chrNW_004955437:473,192...482,811 		JBrowse link
G Skic3 SKI3 subunit of superkiller complex involved_in ISO (PMID:32006463), (PMID:35120588) UniProt PMID:32006463 PMID:35120588 NCBI chrNW_004955418:16,989,400...17,068,479
Ensembl chrNW_004955418:16,989,400...17,069,441 		JBrowse link
G Skic8 SKI8 subunit of superkiller complex involved_in ISO (PMID:32006463), (PMID:35120588) UniProt PMID:32006463 PMID:35120588 NCBI chrNW_004955450:771,646...788,895
Ensembl chrNW_004955450:770,750...789,485 		JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6l CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (PMID:17452450) MGI PMID:17452450 NCBI chrNW_004955433:2,206,462...2,290,773
Ensembl chrNW_004955433:2,213,444...2,316,049 		JBrowse link
G Pabpn1l PABPN1 like, cytoplasmic acts_upstream_of_or_within ISO (PMID:32558204) MGI PMID:32558204 NCBI chrNW_004955541:2,718,076...2,720,322
Ensembl chrNW_004955541:2,718,076...2,720,322 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:21245038) UniProt PMID:21245038 NCBI chrNW_004955430:7,272,911...7,277,726
Ensembl chrNW_004955430:7,272,765...7,277,726 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:26000482) UniProt PMID:26000482 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 ISO (PMID:23644599)
(PMID:15814898)		 UniProt
MGI		 PMID:15814898 PMID:23644599 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within ISO (PMID:15814898) MGI PMID:15814898 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 acts_upstream_of_or_within ISO (PMID:15814898) MGI PMID:15814898 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:11279239) UniProt PMID:11279239 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO PMID:11279239 UniProt PMID:11279239 RGD:11344953 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
nuclear-transcribed mRNA catabolic process, no-go decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:15314026) UniProt PMID:15314026 NCBI chrNW_004955408:170,399...239,492
Ensembl chrNW_004955408:170,399...218,040 		JBrowse link
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:15314026) UniProt PMID:15314026 NCBI chrNW_004955435:18,009,228...18,050,329
Ensembl chrNW_004955435:18,008,352...18,050,329 		JBrowse link
G Gtpbp2 GTP binding protein 2 acts_upstream_of_or_within ISO (PMID:25061210) MGI PMID:25061210 NCBI chrNW_004955437:9,414,128...9,425,671
Ensembl chrNW_004955437:9,412,934...9,424,365 		JBrowse link
G Hbs1l HBS1 like translational GTPase involved_in ISO (PMID:23667253), (PMID:27863242) UniProt PMID:23667253 PMID:27863242 NCBI chrNW_004955439:1,684,466...1,762,314
Ensembl chrNW_004955439:1,683,685...1,762,314 		JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in ISO (PMID:23667253), (PMID:27543824), (PMID:27863242) UniProt PMID:23667253 PMID:27543824 PMID:27863242 NCBI chrNW_004955446:14,564,366...14,566,178
Ensembl chrNW_004955446:14,564,366...14,566,178 		JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 involved_in ISO (PMID:30115939) UniProt PMID:30115939 NCBI chrNW_004955472:670,847...676,060
Ensembl chrNW_004955472:668,352...699,620 		JBrowse link
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctif cap binding complex dependent translation initiation factor involved_in ISO (PMID:19648179) UniProt PMID:19648179 NCBI chrNW_004955402:33,706,824...33,986,476
Ensembl chrNW_004955402:33,706,788...33,987,583 		JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E involved_in ISO (PMID:17468741) UniProt PMID:17468741 NCBI chrNW_004955417:30,823,555...30,858,975
Ensembl chrNW_004955417:30,822,027...30,858,975 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO (PMID:16209946) UniProt PMID:16209946 NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873 		JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISO (PMID:16209946)
(PMID:23917022)		 UniProt
HGNC		 PMID:16209946 PMID:23917022 NCBI chrNW_004955464:5,919,289...5,929,152
Ensembl chrNW_004955464:5,919,289...5,929,152 		JBrowse link
G Magohb mago homolog B, exon junction complex subunit involved_in ISO (PMID:23917022) HGNC PMID:23917022 NCBI chrNW_004955413:7,195,078...7,201,659
Ensembl chrNW_004955413:7,194,798...7,201,969 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:11551508), (PMID:17873884)
(PMID:18369367)		 UniProt PMID:11551508 PMID:17873884 PMID:18369367 NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISO (PMID:17873884), (PMID:18369367)
(PMID:11551508)		 UniProt PMID:11551508 PMID:17873884 PMID:18369367 NCBI chrNW_004955420:12,979,368...12,992,500
Ensembl chrNW_004955420:12,979,368...12,992,500 		JBrowse link
G Pnrc2 proline rich nuclear receptor coactivator 2 involved_in ISO (PMID:19150429) UniProt PMID:19150429 NCBI chrNW_004955452:3,826,337...3,829,896 JBrowse link
G Pym1 PYM homolog 1, exon junction complex associated factor involved_in ISO (PMID:19410547) UniProt PMID:19410547 NCBI chrNW_004955458:3,499,217...3,515,108
Ensembl chrNW_004955458:3,498,822...3,514,839 		JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISO (PMID:16209946) UniProt PMID:16209946 NCBI chrNW_004955568:164,050...166,162
Ensembl chrNW_004955568:164,050...166,162 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO (PMID:16209946)
(PMID:11546874)		 UniProt PMID:11546874 PMID:16209946 NCBI chrNW_004955442:14,995,404...15,009,358
Ensembl chrNW_004955442:14,995,404...15,009,358 		JBrowse link
G Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:11544179) UniProt PMID:11544179 NCBI chrNW_004955442:2,553,135...2,651,772
Ensembl chrNW_004955442:2,553,143...2,651,772 		JBrowse link
G Smg6 SMG6 nonsense mediated mRNA decay factor involved_in ISO (PMID:18974281), (PMID:19060897), (PMID:20930030) UniProt PMID:18974281 PMID:19060897 PMID:20930030 NCBI chrNW_004955481:940,041...1,177,998
Ensembl chrNW_004955481:940,041...1,177,998 		JBrowse link
G Smg8 SMG8 nonsense mediated mRNA decay factor involved_in ISO (PMID:19417104) UniProt PMID:19417104 NCBI chrNW_004955451:3,803,325...3,809,055
Ensembl chrNW_004955451:3,803,196...3,809,389 		JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in ISO (PMID:19417104) UniProt PMID:19417104 NCBI chrNW_004955555:1,463,031...1,481,411
Ensembl chrNW_004955555:1,459,451...1,481,411 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:17468741)
(PMID:18369367)		 UniProt PMID:17468741 PMID:18369367 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Upf2 UPF2 regulator of nonsense mediated mRNA decay involved_in ISO (PMID:18369367), (PMID:19556969) UniProt PMID:18369367 PMID:19556969 NCBI chrNW_004955421:27,867,663...27,962,809
Ensembl chrNW_004955421:27,861,958...27,952,835 		JBrowse link
G Upf3a UPF3A regulator of nonsense mediated mRNA decay NOT|involved_in ISO (PMID:16601204) UniProt PMID:16601204 NCBI chrNW_004955404:25,556...36,730 JBrowse link
G Upf3b UPF3B regulator of nonsense mediated mRNA decay involved_in
acts_upstream_of_or_within		 ISO (PMID:16601204)
(PMID:23821644)
(PMID:18369367)		 UniProt
MGI		 PMID:16601204 PMID:18369367 PMID:23821644 NCBI chrNW_004955534:176,553...193,033
Ensembl chrNW_004955534:176,522...193,319 		JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:20595389) UniProt PMID:20595389 NCBI chrNW_004955408:170,399...239,492
Ensembl chrNW_004955408:170,399...218,040 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within
involved_in		 ISO (PMID:18625844)
(PMID:21336257)		 MGI
UniProt		 PMID:18625844 PMID:21336257 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO (PMID:11337385) MGI PMID:11337385 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526 		JBrowse link
G Parn poly(A)-specific ribonuclease acts_upstream_of_or_within ISO (PMID:18337750) MGI PMID:18337750 NCBI chrNW_004955442:4,255,726...4,421,083
Ensembl chrNW_004955442:4,258,692...4,422,197 		JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 involved_in ISO (PMID:27515512) UniProt PMID:27515512 NCBI chrNW_004955439:21,039,638...21,058,558
Ensembl chrNW_004955439:21,035,825...21,058,549 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 ISO (PMID:23644599)
(PMID:15814898)		 BHF-UCL
MGI		 PMID:15814898 PMID:23644599 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
pericentric heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpv centromere protein V involved_in ISO (PMID:18772885) UniProt PMID:18772885 NCBI chrNW_004955467:1,657,765...1,669,758 JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:15713842) MGI PMID:15713842 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G H3f3a H3 histone, family 3A acts_upstream_of_or_within ISO (PMID:26159997) MGI PMID:26159997 NCBI chrNW_004955489:269,900...278,398
Ensembl chrNW_004955489:269,900...278,398 		JBrowse link
G H3f3b H3 histone, family 3B acts_upstream_of_or_within ISO (PMID:26159997) MGI PMID:26159997 NCBI chrNW_004955506:6,475,336...6,478,781
Ensembl chrNW_004955506:6,474,727...6,482,244 		JBrowse link
G Hells helicase, lymphoid specific involved_in ISO (PMID:14612388) UniProt PMID:14612388 NCBI chrNW_004955507:995,389...1,034,852
Ensembl chrNW_004955507:990,429...1,034,852 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:27043296) UniProt PMID:27043296 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083 		JBrowse link
pericentric heterochromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mis18a MIS18 kinetochore protein A acts_upstream_of_or_within ISO (PMID:22516971) MGI PMID:22516971 NCBI chrNW_004955407:31,799,537...31,813,897
Ensembl chrNW_004955407:31,798,924...31,813,862 		JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 acts_upstream_of_or_within ISO (PMID:21266480) MGI PMID:21266480 NCBI chrNW_004955409:8,539,617...8,587,537 JBrowse link
piRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx4 DEAD-box helicase 4 involved_in ISO (PMID:20439430) UniProt PMID:20439430 NCBI chrNW_004955446:11,967,222...12,025,537
Ensembl chrNW_004955446:11,967,322...12,024,587 		JBrowse link
G Exd1 exonuclease 3'-5' domain containing 1 involved_in ISO (PMID:26669262) UniProt PMID:26669262 NCBI chrNW_004955416:8,032,189...8,089,903 JBrowse link
G Fbxo24 F-box protein 24 acts_upstream_of_or_within ISO (PMID:38470475) MGI PMID:38470475 NCBI chrNW_004955573:305,516...313,107
Ensembl chrNW_004955573:304,231...314,195 		JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 (inactive) involved_in ISO (PMID:22902560) UniProt PMID:22902560 NCBI chrNW_004955456:14,291,445...14,318,310
Ensembl chrNW_004955456:14,291,260...14,318,310 		JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in ISO (PMID:23611983) UniProt PMID:23611983 NCBI chrNW_004955470:3,633,076...3,643,635
Ensembl chrNW_004955470:3,632,869...3,643,642 		JBrowse link
G Henmt1 HEN methyltransferase 1 involved_in ISO (PMID:17652135) UniProt PMID:17652135 NCBI chrNW_004955435:12,137,537...12,154,630
Ensembl chrNW_004955435:12,138,177...12,154,630 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer involved_in ISO (PMID:18694567), (PMID:20011505) UniProt PMID:18694567 PMID:20011505 NCBI chrNW_004955462:9,902,978...9,934,814
Ensembl chrNW_004955462:9,903,006...9,934,570 		JBrowse link
G Mov10l1 Mov10 like RNA helicase 1 involved_in ISO (PMID:20534472), (PMID:20547853), (PMID:23166510), (PMID:25762440) UniProt PMID:20534472 PMID:20547853 PMID:23166510 PMID:25762440 NCBI chrNW_004955413:33,142,857...33,208,897
Ensembl chrNW_004955413:33,142,918...33,208,329 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in ISO (PMID:22020280), (PMID:23706823)
(PMID:17446352), (PMID:26669262)		 UniProt PMID:17446352 PMID:22020280 PMID:23706823 PMID:26669262 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873 		JBrowse link
G Piwil4 piwi like RNA-mediated gene silencing 4 involved_in ISO (PMID:17395546), (PMID:22020280)
(PMID:26669262)		 UniProt PMID:17395546 PMID:22020280 PMID:26669262 NCBI chrNW_004955605:331,633...398,528 JBrowse link
G Pld6 phospholipase D family member 6 involved_in ISO (PMID:21397848) UniProt PMID:21397848 NCBI chrNW_004955577:698,741...702,977 JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 involved_in ISO (PMID:34347949) UniProt PMID:34347949 NCBI chrNW_004955439:21,039,638...21,058,558
Ensembl chrNW_004955439:21,035,825...21,058,549 		JBrowse link
G Tdrd1 tudor domain containing 1 involved_in ISO (PMID:19465913) UniProt PMID:19465913 NCBI chrNW_004955431:19,173,336...19,218,183
Ensembl chrNW_004955431:19,173,234...19,218,290 		JBrowse link
G Tdrd12 tudor domain containing 12 involved_in ISO (PMID:24067652) UniProt PMID:24067652 NCBI chrNW_004955468:5,201,216...5,277,062
Ensembl chrNW_004955468:5,141,077...5,275,748 		JBrowse link
G Tdrd9 tudor domain containing 9 involved_in ISO (PMID:20059948), (PMID:28633017) UniProt PMID:20059948 PMID:28633017 NCBI chrNW_004955538:2,667,219...2,749,805
Ensembl chrNW_004955538:2,667,299...2,749,248 		JBrowse link
G Tdrkh tudor and KH domain containing involved_in ISO (PMID:23714778) UniProt PMID:23714778 NCBI chrNW_004955589:630,989...649,936
Ensembl chrNW_004955589:631,462...649,936 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated NOT|involved_in ISO (PMID:32381626) UniProt PMID:32381626 NCBI chrNW_004955463:7,296,204...7,360,935
Ensembl chrNW_004955463:7,298,030...7,360,971 		JBrowse link
piRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:24787618) FlyBase PMID:24787618 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Gtsf1 gametocyte specific factor 1 involved_in ISO (PMID:29437694) FlyBase PMID:29437694 NCBI chrNW_004955458:1,701,072...1,718,463
Ensembl chrNW_004955458:1,701,072...1,718,463 		JBrowse link
G Piwil1 piwi like RNA-mediated gene silencing 1 involved_in ISO (PMID:24787618)
(PMID:25582079)		 FlyBase PMID:24787618 PMID:25582079 NCBI chrNW_004955482:1,435,925...1,451,067
Ensembl chrNW_004955482:1,435,925...1,450,857 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in ISO (PMID:29437694) FlyBase PMID:29437694 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873 		JBrowse link
G Piwil4 piwi like RNA-mediated gene silencing 4 involved_in ISO (PMID:29437694) FlyBase PMID:29437694 NCBI chrNW_004955605:331,633...398,528 JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:28792939) UniProt PMID:28792939 NCBI chrNW_004955464:6,610,350...6,734,606
Ensembl chrNW_004955464:6,646,245...6,734,066 		JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISO (PMID:28792939) UniProt PMID:28792939 NCBI chrNW_004955432:1,268,217...1,330,385
Ensembl chrNW_004955432:1,268,103...1,329,436 		JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A involved_in ISO (PMID:32209697) UniProt PMID:32209697 NCBI chrNW_004955470:3,951,010...3,964,391
Ensembl chrNW_004955470:3,950,750...3,965,750 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO (PMID:18218628) UniProt PMID:18218628 NCBI chrNW_004955464:8,699,142...8,847,289
Ensembl chrNW_004955464:8,699,088...8,788,878 		JBrowse link
G Larp4b La ribonucleoprotein 4B involved_in ISO (PMID:26001795) FlyBase PMID:26001795 NCBI chrNW_004955492:113,900...197,753
Ensembl chrNW_004955492:138,374...193,145 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:28188285) UniProt PMID:28188285 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) UniProt PMID:24356969 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955504:4,443,051...4,476,373
Ensembl chrNW_004955504:4,443,051...4,476,520 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004955433:8,288,432...8,347,347
Ensembl chrNW_004955433:8,288,432...8,347,347 		JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:16364915) UniProt PMID:16364915 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
positive regulation of heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:20935635) UniProt PMID:20935635 NCBI chrNW_004955458:3,555,603...3,561,063
Ensembl chrNW_004955458:3,555,603...3,562,120 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO (PMID:20407419) UniProt PMID:20407419 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989 		JBrowse link
positive regulation of miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ripk1 receptor interacting serine/threonine kinase 1 acts_upstream_of ISO (PMID:26020802) ARUK-UCL PMID:26020802 NCBI chrNW_004955465:10,127,907...10,167,895
Ensembl chrNW_004955465:10,128,931...10,168,399 		JBrowse link
positive regulation of miRNA-mediated gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:17057366) UniProt PMID:17057366 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:17057366) UniProt PMID:17057366 NCBI chrNW_004955420:9,903,736...9,966,100
Ensembl chrNW_004955420:9,903,736...9,966,100 		JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in ISO (PMID:20818387), (PMID:22345517) UniProt PMID:20818387 PMID:22345517 NCBI chrNW_004955452:9,487,725...9,623,565
Ensembl chrNW_004955452:9,487,725...9,624,066 		JBrowse link
G Pum2 pumilio RNA binding family member 2 involved_in ISO (PMID:22345517) UniProt PMID:22345517 NCBI chrNW_004955469:2,810,825...2,886,911
Ensembl chrNW_004955469:2,810,573...2,886,611 		JBrowse link
G Tial1 TIA1 cytotoxic granule associated RNA binding protein like 1 involved_in ISO (PMID:33203680) FlyBase PMID:33203680 NCBI chrNW_004955551:370,792...395,836
Ensembl chrNW_004955551:370,792...395,836 		JBrowse link
G Trim71 tripartite motif containing 71 acts_upstream_of_or_within ISO (PMID:19898466) MGI PMID:19898466 NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:15766526) UniProt PMID:15766526 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
positive regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:22977175) BHF-UCL PMID:22977175 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:23386060), (PMID:25038453) BHF-UCL PMID:23386060 PMID:25038453 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Cnot8 CCR4-NOT transcription complex subunit 8 involved_in ISO (PMID:22977175) BHF-UCL PMID:22977175 NCBI chrNW_004955408:9,112,208...9,132,650
Ensembl chrNW_004955408:9,112,208...9,132,758 		JBrowse link
G Gtpbp1 GTP binding protein 1 involved_in ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chrNW_004955413:24,823,113...24,849,522
Ensembl chrNW_004955413:24,823,113...24,852,691 		JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955452:3,318,536...3,354,725
Ensembl chrNW_004955452:3,315,133...3,355,508 		JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO (PMID:16126846) UniProt PMID:16126846 NCBI chrNW_004955495:3,183,083...3,194,356
Ensembl chrNW_004955495:3,183,179...3,193,376 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:33020597) FlyBase PMID:33020597 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:24726324) UniProt PMID:24726324 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16410805) RGD
UniProt		 PMID:737213 PMID:16410805 RGD:11554176 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992 		JBrowse link
G Prr5l proline rich 5 like involved_in ISO (PMID:21964062) UniProt PMID:21964062 NCBI chrNW_004955422:9,972,588...10,069,411
Ensembl chrNW_004955422:9,972,588...10,048,669 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:25026077)
(PMID:26000482)		 UniProt PMID:25026077 PMID:26000482 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 involved_in ISO (PMID:31727855) UniProt PMID:31727855 NCBI chrNW_004955550:1,073,697...1,105,055
Ensembl chrNW_004955550:1,074,170...1,105,357 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:24726324)
(PMID:25225333)		 UniProt
CAFA		 PMID:24726324 PMID:25225333 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:19909337)
(PMID:19322177), (PMID:23185455)		 UniProt PMID:19322177 PMID:19909337 PMID:23185455 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO PMID:17185417
(PMID:21876179)		 UniProt PMID:17185417 PMID:21876179 RGD:8553432 NCBI chrNW_004955494:3,925,478...3,985,469
Ensembl chrNW_004955494:3,926,413...3,983,736 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:15634918) UniProt PMID:15634918 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:21278420) UniProt PMID:21278420 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:21278420)
(PMID:19716330)		 UniProt PMID:19716330 PMID:21278420 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:14731398) UniProt PMID:14731398 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955413:25,820,428...26,060,681
Ensembl chrNW_004955413:25,886,077...26,048,546 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) UniProt PMID:21984185 NCBI chrNW_004955506:4,440,555...4,579,642
Ensembl chrNW_004955506:4,440,555...4,559,070 		JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:12748283)
(PMID:21278420)		 UniProt PMID:12748283 PMID:21278420 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO PMID:12748283 UniProt PMID:12748283 RGD:11344945 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:22367205) UniProt PMID:22367205 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:18337750) MGI PMID:18337750 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778 		JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:23644599)
(PMID:21278420)		 BHF-UCL
UniProt		 PMID:21278420 PMID:23644599 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:21278420)
(PMID:19716330)		 UniProt PMID:19716330 PMID:21278420 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955413:25,820,428...26,060,681
Ensembl chrNW_004955413:25,886,077...26,048,546 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) UniProt PMID:21984185 NCBI chrNW_004955506:4,440,555...4,579,642
Ensembl chrNW_004955506:4,440,555...4,559,070 		JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:10330172)
(PMID:20595389)
(PMID:21278420)		 UniProt PMID:10330172 PMID:20595389 PMID:21278420 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
positive regulation of post-transcriptional gene silencing by RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 ISO RGD PMID:15147961 RGD:401900682 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
positive regulation of pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgcr8 DGCR8 microprocessor complex subunit involved_in ISO (PMID:15574589), (PMID:32926445) UniProt PMID:15574589 PMID:32926445 NCBI chrNW_004955442:17,998,565...18,034,247
Ensembl chrNW_004955442:17,998,565...18,030,831 		JBrowse link
G Trub1 TruB pseudouridine synthase family member 1 involved_in ISO (PMID:32926445) UniProt PMID:32926445 NCBI chrNW_004955431:19,840,827...19,877,930
Ensembl chrNW_004955431:19,840,662...19,877,930 		JBrowse link
positive regulation of primary miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
post-transcriptional gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP Elav-like family member 1 involved_in ISO (PMID:30508596) ARUK-UCL PMID:30508596 RGD:38501076 NCBI chrNW_004955422:742,017...817,649
Ensembl chrNW_004955422:742,017...817,647 		JBrowse link
G Celf2 CUGBP Elav-like family member 2 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chrNW_004955421:27,064,497...27,374,850
Ensembl chrNW_004955421:26,992,734...27,374,850 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO (PMID:28350193) ARUK-UCL PMID:28350193 NCBI chrNW_004955563:1,283,424...1,315,283
Ensembl chrNW_004955563:1,283,421...1,315,283 		JBrowse link
G Endou endonuclease, poly(U) specific involved_in ISO (PMID:37803019) FlyBase PMID:37803019 NCBI chrNW_004955500:6,631,749...6,653,457
Ensembl chrNW_004955500:6,632,743...6,646,657 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chrNW_004955453:3,201,593...3,301,541
Ensembl chrNW_004955453:3,203,358...3,301,547 		JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in ISO (PMID:22342750), (PMID:24412312) UniProt PMID:22342750 PMID:24412312 NCBI chrNW_004955452:9,487,725...9,623,565
Ensembl chrNW_004955452:9,487,725...9,624,066 		JBrowse link
pre-miRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpo5 exportin 5 involved_in ISO (PMID:14681208)
(PMID:15613540)		 BHF-UCL PMID:14681208 PMID:15613540 NCBI chrNW_004955437:9,351,045...9,392,396
Ensembl chrNW_004955437:9,351,045...9,392,396 		JBrowse link
pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific acts_upstream_of_or_within ISO (PMID:23622242) MGI PMID:23622242 NCBI chrNW_004955545:1,078,319...1,106,938
Ensembl chrNW_004955545:1,078,319...1,106,938 		JBrowse link
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:16424907), (PMID:17671087), (PMID:18178619), (PMID:19966796), (PMID:23661684)
(PMID:16357216)		 ComplexPortal
BHF-UCL		 PMID:16357216 PMID:16424907 PMID:17671087 PMID:18178619 PMID:19966796 More... NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
G Bcdin3d BCDIN3 domain containing RNA methyltransferase involved_in ISO (PMID:33664453) ARUK-UCL PMID:33664453 NCBI chrNW_004955547:427,127...432,482
Ensembl chrNW_004955547:427,432...432,455 		JBrowse link
G Dicer1 dicer 1, ribonuclease III involved_in
acts_upstream_of_or_within		 ISO (PMID:15973356), (PMID:16357216), (PMID:18178619), (PMID:23661684), (PMID:25549615)
(PMID:18604195)		 BHF-UCL
MGI		 PMID:15973356 PMID:16357216 PMID:18178619 PMID:18604195 PMID:23661684 More... NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Drosha drosha ribonuclease III acts_upstream_of_or_within ISO (PMID:18604195) MGI PMID:18604195 NCBI chrNW_004955426:17,387,595...17,505,126
Ensembl chrNW_004955426:17,387,534...17,502,294 		JBrowse link
G Lin28a lin-28 homolog A involved_in
acts_upstream_of_or_within		 ISO (PMID:19703396)
(PMID:18292307), (PMID:18604195)
(PMID:18604195)		 UniProt
MGI		 PMID:18292307 PMID:18604195 PMID:19703396 NCBI chrNW_004955452:5,793,583...5,808,662
Ensembl chrNW_004955452:5,793,583...5,808,662 		JBrowse link
G Lin28b lin-28 homolog B involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chrNW_004955411:30,381,208...30,499,678 JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in ISO (PMID:16424907), (PMID:23661684) BHF-UCL PMID:16424907 PMID:23661684 NCBI chrNW_004955403:18,394,609...18,410,381
Ensembl chrNW_004955403:18,373,375...18,410,627 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:15973356), (PMID:16357216), (PMID:16424907), (PMID:18178619), (PMID:23661684) BHF-UCL PMID:15973356 PMID:16357216 PMID:16424907 PMID:18178619 PMID:23661684 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806 		JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:25979828)
(PMID:19703396)		 UniProt PMID:19703396 PMID:25979828 NCBI chrNW_004955464:6,610,350...6,734,606
Ensembl chrNW_004955464:6,646,245...6,734,066 		JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISO (PMID:25979828) UniProt PMID:25979828 NCBI chrNW_004955432:1,268,217...1,330,385
Ensembl chrNW_004955432:1,268,103...1,329,436 		JBrowse link
primary miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked acts_upstream_of_or_within_negative_effect ISO (PMID:28819115) MGI PMID:28819115 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358 		JBrowse link
G Dgcr8 DGCR8 microprocessor complex subunit acts_upstream_of_or_within
involved_in		 ISO (PMID:15531877), (PMID:15574589)
(PMID:15574589), (PMID:24449907), (PMID:24910438)		 MGI
BHF-UCL		 PMID:15531877 PMID:15574589 PMID:24449907 PMID:24910438 NCBI chrNW_004955442:17,998,565...18,034,247
Ensembl chrNW_004955442:17,998,565...18,030,831 		JBrowse link
G Drosha drosha ribonuclease III involved_in ISO (PMID:14508493), (PMID:15574589) WB PMID:14508493 PMID:15574589 NCBI chrNW_004955426:17,387,595...17,505,126
Ensembl chrNW_004955426:17,387,534...17,502,294 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:26321680) UniProt PMID:26321680 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:25799998) UniProt PMID:25799998 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Pus10 pseudouridine synthase 10 involved_in ISO (PMID:31819270) UniProt PMID:31819270 NCBI chrNW_004955424:22,830,889...22,899,420
Ensembl chrNW_004955424:22,832,882...22,899,420 		JBrowse link
G Srrt serrate, RNA effector molecule involved_in ISO (PMID:19632182) UniProt PMID:19632182 NCBI chrNW_004955573:86,975...101,538
Ensembl chrNW_004955573:87,084...101,033 		JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:33664453) ARUK-UCL PMID:33664453 NCBI chrNW_004955437:6,306,151...6,314,332
Ensembl chrNW_004955437:6,306,151...6,314,332 		JBrowse link
primary piRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Piwil1 piwi like RNA-mediated gene silencing 1 involved_in ISO (PMID:22121019) UniProt PMID:22121019 NCBI chrNW_004955482:1,435,925...1,451,067
Ensembl chrNW_004955482:1,435,925...1,450,857 		JBrowse link
random inactivation of X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1 DNA repair associated acts_upstream_of_or_within ISO (PMID:12419249) MGI PMID:12419249 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528 		JBrowse link
G Cdyl chromodomain Y like involved_in ISO (PMID:24144980) UniProt PMID:24144980 NCBI chrNW_004955465:8,570,197...8,780,551
Ensembl chrNW_004955465:8,568,121...8,780,569 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISO (PMID:25915022) FlyBase PMID:25915022 NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in ISO (PMID:25843628) FlyBase PMID:25843628 NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:25843628)
(PMID:25915022)		 FlyBase PMID:25843628 PMID:25915022 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO (PMID:27892467) MGI PMID:27892467 NCBI chrNW_004955590:383,810...512,854
Ensembl chrNW_004955590:384,817...626,684 		JBrowse link
G Lbr lamin B receptor involved_in ISO (PMID:25915022), (PMID:27492478) FlyBase PMID:25915022 PMID:27492478 NCBI chrNW_004955520:401,733...418,279 JBrowse link
G Ncor2 nuclear receptor corepressor 2 involved_in ISO (PMID:25915022) FlyBase PMID:25915022 NCBI chrNW_004955482:4,927,482...5,031,848
Ensembl chrNW_004955482:4,942,221...5,031,904 		JBrowse link
G Pcgf3 polycomb group ring finger 3 involved_in ISO (PMID:28596365) UniProt PMID:28596365 NCBI chrNW_004955514:307,331...350,039
Ensembl chrNW_004955514:307,332...350,039 		JBrowse link
G Pcgf5 polycomb group ring finger 5 involved_in ISO (PMID:28596365) UniProt PMID:28596365 NCBI chrNW_004955425:1,913,711...1,980,800
Ensembl chrNW_004955425:1,919,228...1,979,874 		JBrowse link
G Rlim ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 ISO (PMID:19945382)
(PMID:24613346)		 UniProt
MGI		 PMID:19945382 PMID:24613346 NCBI chrNW_004955562:508,723...531,699
Ensembl chrNW_004955562:510,739...531,830 		JBrowse link
G Spen spen family transcriptional repressor involved_in ISO (PMID:25843628)
(PMID:25915022)		 FlyBase PMID:25843628 PMID:25915022 NCBI chrNW_004955527:2,279,438...2,343,263
Ensembl chrNW_004955527:2,280,459...2,343,262 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:27892467) MGI PMID:27892467 NCBI chrNW_004955481:6,867,175...6,917,548
Ensembl chrNW_004955481:6,867,175...6,917,548 		JBrowse link
rDNA heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain 2A acts_upstream_of_or_within
involved_in		 ISO (PMID:20168299)
(PMID:12198165), (PMID:16085498), (PMID:19578370)
(PMID:16678107)		 MGI
UniProt		 PMID:12198165 PMID:16085498 PMID:16678107 PMID:19578370 PMID:20168299 NCBI chrNW_004955458:4,149,610...4,186,647
Ensembl chrNW_004955458:4,151,886...4,170,641 		JBrowse link
G Bend3 BEN domain containing 3 involved_in ISO (PMID:26100909) UniProt PMID:26100909 NCBI chrNW_004955411:32,346,573...32,384,796
Ensembl chrNW_004955411:32,345,577...32,384,796 		JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in ISO (PMID:18485871) UniProt PMID:18485871 NCBI chrNW_004955414:22,311,038...22,316,144
Ensembl chrNW_004955414:22,311,038...22,316,144 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18485871) UniProt PMID:18485871 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:12198165), (PMID:16085498) ComplexPortal PMID:12198165 PMID:16085498 NCBI chrNW_004955471:12,206,462...12,240,219
Ensembl chrNW_004955471:12,203,318...12,237,333 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:18485871) UniProt PMID:18485871 NCBI chrNW_004955543:258,479...271,128
Ensembl chrNW_004955543:258,479...272,473 		JBrowse link
regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Caprin1 cell cycle associated protein 1 involved_in ISO (PMID:31439799) UniProt PMID:31439799 NCBI chrNW_004955422:12,126,893...12,170,877 JBrowse link
regulation of miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tarbp2 TARBP2 subunit of RISC loading complex acts_upstream_of_or_within ISO (PMID:27159388) MGI PMID:27159388 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806 		JBrowse link
regulation of miRNA-mediated gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lin28a lin-28 homolog A acts_upstream_of_or_within ISO (PMID:19898466) MGI PMID:19898466 NCBI chrNW_004955452:5,793,583...5,808,662
Ensembl chrNW_004955452:5,793,583...5,808,662 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO (PMID:22187428) MGI PMID:22187428 NCBI chrNW_004955506:4,440,555...4,579,642
Ensembl chrNW_004955506:4,440,555...4,559,070 		JBrowse link
G Trim71 tripartite motif containing 71 acts_upstream_of_or_within ISO (PMID:19898466) MGI PMID:19898466 NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432 		JBrowse link
regulation of mitochondrial mRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fastkd1 FAST kinase domains 1 involved_in ISO (PMID:28335001) UniProt PMID:28335001 NCBI chrNW_004955449:4,974,131...5,018,426
Ensembl chrNW_004955449:4,977,520...5,018,178 		JBrowse link
G Fastkd3 FAST kinase domains 3 involved_in ISO (PMID:27789713) UniProt PMID:27789713 NCBI chrNW_004955504:5,401,956...5,412,216
Ensembl chrNW_004955504:5,400,544...5,411,401 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:21666256) UniProt PMID:21666256 NCBI chrNW_004955430:7,272,911...7,277,726
Ensembl chrNW_004955430:7,272,765...7,277,726 		JBrowse link
G Tbrg4 transforming growth factor beta regulator 4 involved_in ISO (PMID:28335001) UniProt PMID:28335001 NCBI chrNW_004955456:7,197,690...7,207,102
Ensembl chrNW_004955456:7,199,560...7,208,808 		JBrowse link
regulation of mRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 ISO RGD PMID:26846850 RGD:11526737 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 ISO RGD PMID:26846850 RGD:11526737 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase involved_in ISO (PMID:29279410) UniProt PMID:29279410 NCBI chrNW_004955478:11,104,445...11,128,980
Ensembl chrNW_004955478:11,105,920...11,128,222 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO (PMID:19401441) UniProt PMID:19401441 NCBI chrNW_004955550:1,273,170...1,275,843
Ensembl chrNW_004955550:1,273,284...1,279,743 		JBrowse link
G Brf1 BRF1 general transcription factor IIIB subunit acts_upstream_of_or_within ISO (PMID:14976220) MGI PMID:14976220 NCBI chrNW_004955538:3,469,322...3,544,704
Ensembl chrNW_004955538:3,470,249...3,544,704 		JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 ISO RGD PMID:18923037 RGD:13524564 NCBI chrNW_004955604:242,627...260,594
Ensembl chrNW_004955604:241,170...260,594 		JBrowse link
G Calcr calcitonin receptor acts_upstream_of_or_within ISO (PMID:9002981) MGI PMID:9002981 NCBI chrNW_004955432:10,310,776...10,391,029
Ensembl chrNW_004955432:10,309,263...10,391,141 		JBrowse link
G Carhsp1 calcium regulated heat stable protein 1 involved_in ISO (PMID:21078874) UniProt PMID:21078874 NCBI chrNW_004955442:9,382,360...9,388,414
Ensembl chrNW_004955442:9,382,354...9,388,414 		JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:28002401) UniProt PMID:28002401 NCBI chrNW_004955408:32,868,184...32,923,788
Ensembl chrNW_004955408:32,868,184...32,916,807 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:18279852) UniProt PMID:18279852 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO RGD PMID:22736542 RGD:9586719 NCBI chrNW_004955464:8,699,142...8,847,289
Ensembl chrNW_004955464:8,699,088...8,788,878 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:17417632) UniProt PMID:17417632 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D acts_upstream_of_or_within ISO (PMID:14976220) MGI PMID:14976220 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904 		JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO (PMID:16126846) UniProt PMID:16126846 NCBI chrNW_004955495:3,183,083...3,194,356
Ensembl chrNW_004955495:3,183,179...3,193,376 		JBrowse link
G Pabpc4 poly(A) binding protein cytoplasmic 4 acts_upstream_of_or_within ISO (PMID:24469397) MGI PMID:24469397 NCBI chrNW_004955452:17,083,679...17,101,436
Ensembl chrNW_004955452:17,084,805...17,101,026 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 acts_upstream_of_or_within ISO (PMID:20817677) MGI PMID:20817677 NCBI chrNW_004955532:3,604,720...3,615,112
Ensembl chrNW_004955532:3,603,975...3,614,290 		JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (PMID:20870947) UniProt PMID:20870947 NCBI chrNW_004955404:618,092...639,424
Ensembl chrNW_004955404:618,092...639,704 		JBrowse link
G Pias4 protein inhibitor of activated STAT 4 involved_in ISO (PMID:34048572) UniProt PMID:34048572 NCBI chrNW_004955495:4,760,576...4,791,422
Ensembl chrNW_004955495:4,761,862...4,791,490 		JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in ISO (PMID:26724866) UniProt PMID:26724866 NCBI chrNW_004955452:9,487,725...9,623,565
Ensembl chrNW_004955452:9,487,725...9,624,066 		JBrowse link
G Pum2 pumilio RNA binding family member 2 involved_in ISO (PMID:26724866) UniProt PMID:26724866 NCBI chrNW_004955469:2,810,825...2,886,911
Ensembl chrNW_004955469:2,810,573...2,886,611 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:20977548) UniProt PMID:20977548 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778 		JBrowse link
G Rbm33 RNA binding motif protein 33 involved_in ISO (PMID:37257451) UniProt PMID:37257451 NCBI chrNW_004955491:8,534,093...8,633,838
Ensembl chrNW_004955491:8,539,605...8,628,197 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:18172933) BHF-UCL PMID:18172933 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Rnasel ribonuclease L acts_upstream_of_or_within ISO (PMID:22441668) MGI PMID:22441668 NCBI chrNW_004955406:21,413,950...21,424,860
Ensembl chrNW_004955406:21,411,980...21,425,052 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (PMID:15356574) MGI PMID:15356574 NCBI chrNW_004955599:688,414...690,644 JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in ISO (PMID:34048572) UniProt PMID:34048572 NCBI chrNW_004955500:6,924,445...6,978,482
Ensembl chrNW_004955500:6,926,548...6,979,230 		JBrowse link
G Vim vimentin involved_in ISO (PMID:21746880) UniProt PMID:21746880 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554 		JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:32492408)
(PMID:32943573)		 UniProt PMID:32492408 PMID:32943573 NCBI chrNW_004955528:935,182...951,722
Ensembl chrNW_004955528:935,182...951,722 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:32492408)
(PMID:32943573)
(PMID:24284625), (PMID:26046440)		 UniProt PMID:24284625 PMID:26046440 PMID:32492408 PMID:32943573 NCBI chrNW_004955452:7,783,398...7,815,468 JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO (PMID:32194978)
(PMID:32943573)
(PMID:32492408)		 UniProt PMID:32194978 PMID:32492408 PMID:32943573 NCBI chrNW_004955444:15,758,596...15,789,979
Ensembl chrNW_004955444:15,758,596...15,789,979 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 ISO (PMID:15187101), (PMID:15634918)
(PMID:15634918)
(PMID:17288565), (PMID:22701344)
(PMID:15467755)
(PMID:11719186), (PMID:15687258), (PMID:20702587), (PMID:9703499)		 UniProt
MGI		 PMID:9703499 PMID:11719186 PMID:15187101 PMID:15467755 PMID:15634918 More... NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within		 ISO PMID:12748283
(PMID:24700863)
(PMID:20622884), (PMID:22701344), (PMID:24733888)
(PMID:15467755)
(PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:20702587), (PMID:24700863), (PMID:25014217), (PMID:26542173)
PMID:11279239
(PMID:12198173), (PMID:25106868)		 UniProt
MGI		 PMID:11279239 PMID:12198173 PMID:12748283 PMID:15467755 PMID:15538381 More... RGD:11344945 RGD:11344953 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:25106868)
(PMID:20622884), (PMID:22701344)
(PMID:15467755)		 UniProt
MGI		 PMID:15467755 PMID:20622884 PMID:22701344 PMID:25106868 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO (PMID:12080348) UniProt PMID:12080348 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
regulation of mRNA stability involved in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:17101699) UniProt PMID:17101699 NCBI chrNW_004955451:12,312,715...12,348,663
Ensembl chrNW_004955451:12,312,715...12,348,663 		JBrowse link
regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:31636267) UniProt PMID:31636267 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casc3 CASC3 exon junction complex subunit involved_in ISO (PMID:19478851) ComplexPortal PMID:19478851 NCBI chrNW_004955451:14,784,915...14,804,191
Ensembl chrNW_004955451:14,784,915...14,806,773 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO (PMID:19478851) ComplexPortal PMID:19478851 NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873 		JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISO (PMID:19478851) ComplexPortal PMID:19478851 NCBI chrNW_004955464:5,919,289...5,929,152
Ensembl chrNW_004955464:5,919,289...5,929,152 		JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISO (PMID:19478851) ComplexPortal PMID:19478851 NCBI chrNW_004955568:164,050...166,162
Ensembl chrNW_004955568:164,050...166,162 		JBrowse link
regulation of rDNA heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102008188 core histone macro-H2A.1 NOT|involved_in ISO (PMID:24071584) UniProt PMID:24071584 NCBI chrNW_004955408:30,497,531...30,550,095
Ensembl chrNW_004955408:30,497,531...30,550,118 		JBrowse link
regulatory ncRNA-mediated gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Exd1 exonuclease 3'-5' domain containing 1 involved_in ISO (PMID:26669262) UniProt PMID:26669262 NCBI chrNW_004955416:8,032,189...8,089,903 JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 (inactive) involved_in ISO (PMID:22902560) UniProt PMID:22902560 NCBI chrNW_004955456:14,291,445...14,318,310
Ensembl chrNW_004955456:14,291,260...14,318,310 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer involved_in ISO (PMID:18694567) UniProt PMID:18694567 NCBI chrNW_004955462:9,902,978...9,934,814
Ensembl chrNW_004955462:9,903,006...9,934,570 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in ISO (PMID:17446352), (PMID:18381894) UniProt PMID:17446352 PMID:18381894 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873 		JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955413:25,820,428...26,060,681
Ensembl chrNW_004955413:25,886,077...26,048,546 		JBrowse link
regulatory ncRNA-mediated heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3a DNA methyltransferase 3 alpha involved_in ISO (PMID:23435381) FlyBase PMID:23435381 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:23435381) FlyBase PMID:23435381 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in ISO (PMID:25843628) FlyBase PMID:25843628 NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:25843628) FlyBase PMID:25843628 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G Spen spen family transcriptional repressor involved_in ISO (PMID:25843628) FlyBase PMID:25843628 NCBI chrNW_004955527:2,279,438...2,343,263
Ensembl chrNW_004955527:2,280,459...2,343,262 		JBrowse link
regulatory ncRNA-mediated post-transcriptional gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:15713842) MGI PMID:15713842 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
ribosome hibernation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serbp1 SERPINE1 mRNA binding protein 1 involved_in ISO (PMID:36691768)
(PMID:34815424)		 UniProt PMID:34815424 PMID:36691768 NCBI chrNW_004955423:23,763,356...23,774,816
Ensembl chrNW_004955423:23,762,916...23,774,160 		JBrowse link
RISC complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific acts_upstream_of_or_within ISO (PMID:23622242) MGI PMID:23622242 NCBI chrNW_004955545:1,078,319...1,106,938
Ensembl chrNW_004955545:1,078,319...1,106,938 		JBrowse link
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:19701182), (PMID:19966796), (PMID:23661684) BHF-UCL PMID:19701182 PMID:19966796 PMID:23661684 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO (PMID:17495927) UniProt PMID:17495927 NCBI chrNW_004955511:2,588,825...2,592,108
Ensembl chrNW_004955511:2,588,825...2,593,192 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:17531811) UniProt PMID:17531811 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011 		JBrowse link
G Dicer1 dicer 1, ribonuclease III involved_in ISO (PMID:15973356), (PMID:18178619), (PMID:23661684) BHF-UCL PMID:15973356 PMID:18178619 PMID:23661684 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in ISO (PMID:23661684) ComplexPortal PMID:23661684 NCBI chrNW_004955403:18,394,609...18,410,381
Ensembl chrNW_004955403:18,373,375...18,410,627 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:15973356), (PMID:18178619), (PMID:23661684) ComplexPortal PMID:15973356 PMID:18178619 PMID:23661684 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806 		JBrowse link
secondary piRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx4 DEAD-box helicase 4 involved_in ISO (PMID:28633017) UniProt PMID:28633017 NCBI chrNW_004955446:11,967,222...12,025,537
Ensembl chrNW_004955446:11,967,322...12,024,587 		JBrowse link
G Gtsf1 gametocyte specific factor 1 involved_in ISO (PMID:29437694) FlyBase PMID:29437694 NCBI chrNW_004955458:1,701,072...1,718,463
Ensembl chrNW_004955458:1,701,072...1,718,463 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in ISO (PMID:18922463), (PMID:28633017)
(PMID:29437694)		 UniProt
FlyBase		 PMID:18922463 PMID:28633017 PMID:29437694 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873 		JBrowse link
G Piwil4 piwi like RNA-mediated gene silencing 4 involved_in ISO (PMID:29437694)
(PMID:18922463)		 FlyBase
UniProt		 PMID:18922463 PMID:29437694 NCBI chrNW_004955605:331,633...398,528 JBrowse link
siRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:23661684) ComplexPortal PMID:23661684 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Dicer1 dicer 1, ribonuclease III involved_in
acts_upstream_of_or_within		 ISO (PMID:15973356), (PMID:17452327), (PMID:23661684)
(PMID:24209619)
(PMID:14528307)
(PMID:19701182)		 UniProt
MGI
BHF-UCL		 PMID:14528307 PMID:15973356 PMID:17452327 PMID:19701182 PMID:23661684 More... NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in ISO (PMID:17452327) UniProt PMID:17452327 NCBI chrNW_004955403:18,394,609...18,410,381
Ensembl chrNW_004955403:18,373,375...18,410,627 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:15973356), (PMID:17452327), (PMID:23661684) UniProt PMID:15973356 PMID:17452327 PMID:23661684 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806 		JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO (PMID:19701182) BHF-UCL PMID:19701182 NCBI chrNW_004955504:649,248...669,796
Ensembl chrNW_004955504:651,779...670,589 		JBrowse link
G Tsn translin involved_in ISO (PMID:21552258) ComplexPortal PMID:21552258 NCBI chrNW_004955459:8,285,442...8,299,329
Ensembl chrNW_004955459:8,285,442...8,299,397 		JBrowse link
G Tsnax translin associated factor X involved_in ISO (PMID:21552258) ComplexPortal PMID:21552258 NCBI chrNW_004955492:7,304,982...7,335,512
Ensembl chrNW_004955492:7,306,364...7,335,282 		JBrowse link
siRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,935,028...13,967,281
Ensembl chrNW_004955452:13,934,346...13,968,624 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:22795694)
(PMID:15260970)		 BHF-UCL PMID:15260970 PMID:22795694 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,977,487...14,108,729
Ensembl chrNW_004955452:13,977,481...14,094,259 		JBrowse link
G Ago4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chrNW_004955452:13,882,416...13,922,590
Ensembl chrNW_004955452:13,882,416...13,922,590 		JBrowse link
subtelomeric heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler involved_in ISO (PMID:26055325)
(PMID:20211137)		 BHF-UCL
GO_Central		 PMID:20211137 PMID:26055325 NCBI chrNW_004955557:947,368...1,252,701
Ensembl chrNW_004955557:947,167...1,252,724 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (PMID:9214638) ARUK-UCL PMID:9214638 NCBI chrNW_004955451:16,548,898...16,563,449
Ensembl chrNW_004955451:16,548,858...16,564,310 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:9214638) ARUK-UCL PMID:9214638 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G H3f3a H3 histone, family 3A acts_upstream_of_or_within ISO (PMID:26159997) MGI PMID:26159997 NCBI chrNW_004955489:269,900...278,398
Ensembl chrNW_004955489:269,900...278,398 		JBrowse link
G H3f3b H3 histone, family 3B acts_upstream_of_or_within ISO (PMID:26159997) MGI PMID:26159997 NCBI chrNW_004955506:6,475,336...6,478,781
Ensembl chrNW_004955506:6,474,727...6,482,244 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:24735877) BHF-UCL PMID:24735877 NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:21847107) BHF-UCL PMID:21847107 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083 		JBrowse link
target-directed miRNA degradation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elob elongin B involved_in ISO (PMID:33184237) FlyBase PMID:33184237 NCBI chrNW_004955442:14,498,666...14,501,895
Ensembl chrNW_004955442:14,498,725...14,502,135 		JBrowse link
G Eloc elongin C involved_in ISO (PMID:33184237) FlyBase PMID:33184237 NCBI chrNW_004955444:6,400,721...6,415,881
Ensembl chrNW_004955444:6,400,832...6,415,881 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISO (PMID:29887379) FlyBase PMID:29887379 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068 		JBrowse link
G Zswim8 zinc finger SWIM-type containing 8 involved_in ISO (PMID:33184237) FlyBase PMID:33184237 NCBI chrNW_004955437:18,099,416...18,113,936
Ensembl chrNW_004955437:18,099,589...18,114,726 		JBrowse link
transposable element silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 involved_in ISO (PMID:19730684) UniProt PMID:19730684 NCBI chrNW_004955432:23,059,462...23,119,421
Ensembl chrNW_004955432:23,060,657...23,119,427 		JBrowse link
G Btbd18 BTB domain containing 18 acts_upstream_of_positive_effect ISO (PMID:28292424) UniProt PMID:28292424 NCBI chrNW_004955511:2,641,848...2,647,679
Ensembl chrNW_004955511:2,640,647...2,648,768 		JBrowse link
G CUNH19orf84 chromosome unknown C19orf84 homolog involved_in ISO (PMID:38359823) UniProt PMID:38359823 NCBI chrNW_004955558:1,016,920...1,019,617 JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:23093941)
(PMID:28662698)		 UniProt PMID:23093941 PMID:28662698 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:30853213)
(PMID:25247314)		 UniProt PMID:25247314 PMID:30853213 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:31226208) UniProt PMID:31226208 NCBI chrNW_004955506:1,252,271...1,258,728
Ensembl chrNW_004955506:1,252,274...1,258,728 		JBrowse link
G Tdrd9 tudor domain containing 9 acts_upstream_of_or_within ISO (PMID:27473657) MGI PMID:27473657 NCBI chrNW_004955538:2,667,219...2,749,805
Ensembl chrNW_004955538:2,667,299...2,749,248 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated involved_in ISO (PMID:32381626) UniProt PMID:32381626 NCBI chrNW_004955463:7,296,204...7,360,935
Ensembl chrNW_004955463:7,298,030...7,360,971 		JBrowse link
G Tex19 testis expressed 19 involved_in ISO (PMID:28806172) UniProt PMID:28806172 NCBI chrNW_004955506:773,128...775,155 JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (PMID:28806172) UniProt PMID:28806172 NCBI chrNW_004955437:8,678,212...8,780,700
Ensembl chrNW_004955437:8,677,801...8,782,120 		JBrowse link
transposable element silencing by heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:27856912) MGI PMID:27856912 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301 		JBrowse link
G Dnmt3l DNA methyltransferase 3 like acts_upstream_of_or_within
involved_in		 ISO (PMID:25503965)
(PMID:15318244)		 MGI
UniProt		 PMID:15318244 PMID:25503965 NCBI chrNW_004955407:41,177,582...41,186,965
Ensembl chrNW_004955407:41,177,582...41,186,965 		JBrowse link
G Morc1 MORC family CW-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:25503965) MGI PMID:25503965 NCBI chrNW_004955427:9,790,069...9,974,140
Ensembl chrNW_004955427:9,789,971...9,968,613 		JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:29211708)
(PMID:29728365)		 UniProt PMID:29211708 PMID:29728365 NCBI chrNW_004955455:5,124,737...5,164,495
Ensembl chrNW_004955455:5,124,737...5,164,495 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO (PMID:29211708) UniProt PMID:29211708 NCBI chrNW_004955497:518,462...546,748 JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 acts_upstream_of_positive_effect ISO (PMID:22020280) UniProt PMID:22020280 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873 		JBrowse link
G Piwil4 piwi like RNA-mediated gene silencing 4 acts_upstream_of_or_within
acts_upstream_of_positive_effect		 ISO (PMID:25503965)
(PMID:22020280)		 MGI
UniProt		 PMID:22020280 PMID:25503965 NCBI chrNW_004955605:331,633...398,528 JBrowse link
G Resf1 retroelement silencing factor 1 involved_in ISO (PMID:29728365) UniProt PMID:29728365 NCBI chrNW_004955505:3,684,848...3,709,624 JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (PMID:29728365) UniProt PMID:29728365 NCBI chrNW_004955588:290,497...338,438
Ensembl chrNW_004955588:290,168...338,426 		JBrowse link
G Smyd5 SMYD family member 5 involved_in ISO (PMID:28951459) UniProt PMID:28951459 NCBI chrNW_004955424:12,408,059...12,422,424
Ensembl chrNW_004955424:12,408,059...12,423,164 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (PMID:29211708) UniProt PMID:29211708 NCBI chrNW_004955430:6,440,655...6,480,956
Ensembl chrNW_004955430:6,442,084...6,480,802 		JBrowse link
transposable element silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:30122351) UniProt PMID:30122351 NCBI chrNW_004955435:16,093,471...16,114,735
Ensembl chrNW_004955435:16,092,790...16,117,206 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in ISO (PMID:18922463) UniProt PMID:18922463 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873 		JBrowse link
G Piwil4 piwi like RNA-mediated gene silencing 4 involved_in ISO (PMID:18922463) UniProt PMID:18922463 NCBI chrNW_004955605:331,633...398,528 JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:30122351) UniProt PMID:30122351 NCBI chrNW_004955464:6,610,350...6,734,606
Ensembl chrNW_004955464:6,646,245...6,734,066 		JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISO (PMID:30122351) UniProt PMID:30122351 NCBI chrNW_004955432:1,268,217...1,330,385
Ensembl chrNW_004955432:1,268,103...1,329,436 		JBrowse link
transposable element silencing by piRNA-mediated DNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH19orf84 chromosome unknown C19orf84 homolog involved_in ISO (PMID:38359823) FlyBase PMID:38359823 NCBI chrNW_004955558:1,016,920...1,019,617 JBrowse link
G Ddx4 DEAD-box helicase 4 involved_in ISO (PMID:20439430) UniProt PMID:20439430 NCBI chrNW_004955446:11,967,222...12,025,537
Ensembl chrNW_004955446:11,967,322...12,024,587 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha involved_in ISO (PMID:32674113) FlyBase PMID:32674113 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059 		JBrowse link
G Dnmt3l DNA methyltransferase 3 like involved_in ISO (PMID:32674113) FlyBase PMID:32674113 NCBI chrNW_004955407:41,177,582...41,186,965
Ensembl chrNW_004955407:41,177,582...41,186,965 		JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 (inactive) involved_in ISO (PMID:22902560) UniProt PMID:22902560 NCBI chrNW_004955456:14,291,445...14,318,310
Ensembl chrNW_004955456:14,291,260...14,318,310 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer involved_in ISO (PMID:20011505) UniProt PMID:20011505 NCBI chrNW_004955462:9,902,978...9,934,814
Ensembl chrNW_004955462:9,903,006...9,934,570 		JBrowse link
G Mov10l1 Mov10 like RNA helicase 1 involved_in ISO (PMID:20534472) UniProt PMID:20534472 NCBI chrNW_004955413:33,142,857...33,208,897
Ensembl chrNW_004955413:33,142,918...33,208,329 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in ISO (PMID:18381894) UniProt PMID:18381894 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873 		JBrowse link
G Piwil4 piwi like RNA-mediated gene silencing 4 involved_in ISO (PMID:32674113)
(PMID:18381894), (PMID:32674113), (PMID:38359823), (PMID:39294378)		 FlyBase
UniProt		 PMID:18381894 PMID:32674113 PMID:38359823 PMID:39294378 NCBI chrNW_004955605:331,633...398,528 JBrowse link
G Spin1 spindlin 1 involved_in ISO (PMID:39294378) UniProt PMID:39294378 NCBI chrNW_004955515:3,470,956...3,518,909
Ensembl chrNW_004955515:3,470,956...3,513,728 		JBrowse link
G Spocd1 SPOC domain containing 1 involved_in ISO (PMID:32674113), (PMID:38359823)
(PMID:39294378)		 FlyBase
UniProt		 PMID:32674113 PMID:38359823 PMID:39294378 NCBI chrNW_004955452:10,192,076...10,214,914 JBrowse link
G Tdrd1 tudor domain containing 1 involved_in ISO (PMID:19465913) UniProt PMID:19465913 NCBI chrNW_004955431:19,173,336...19,218,183
Ensembl chrNW_004955431:19,173,234...19,218,290 		JBrowse link
G Tdrd12 tudor domain containing 12 involved_in ISO (PMID:24067652) UniProt PMID:24067652 NCBI chrNW_004955468:5,201,216...5,277,062
Ensembl chrNW_004955468:5,141,077...5,275,748 		JBrowse link
G Tdrd5 tudor domain containing 5 involved_in ISO (PMID:21383078) UniProt PMID:21383078 NCBI chrNW_004955406:18,895,010...18,961,200
Ensembl chrNW_004955406:18,895,011...18,962,333 		JBrowse link
G Tdrd9 tudor domain containing 9 involved_in ISO (PMID:20059948) UniProt PMID:20059948 NCBI chrNW_004955538:2,667,219...2,749,805
Ensembl chrNW_004955538:2,667,299...2,749,248 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated involved_in ISO (PMID:32381626), (PMID:32719317) UniProt PMID:32381626 PMID:32719317 NCBI chrNW_004955463:7,296,204...7,360,935
Ensembl chrNW_004955463:7,298,030...7,360,971 		JBrowse link
transposable element silencing by piRNA-mediated heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx4 DEAD-box helicase 4 acts_upstream_of_positive_effect ISO (PMID:28633017) UniProt PMID:28633017 NCBI chrNW_004955446:11,967,222...12,025,537
Ensembl chrNW_004955446:11,967,322...12,024,587 		JBrowse link
G Piwil1 piwi like RNA-mediated gene silencing 1 involved_in ISO (PMID:22121019) UniProt PMID:22121019 NCBI chrNW_004955482:1,435,925...1,451,067
Ensembl chrNW_004955482:1,435,925...1,450,857 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 acts_upstream_of_positive_effect ISO (PMID:23706823) UniProt PMID:23706823 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873 		JBrowse link
G Spocd1 SPOC domain containing 1 involved_in ISO (PMID:32674113) UniProt PMID:32674113 NCBI chrNW_004955452:10,192,076...10,214,914 JBrowse link
G Tdrd9 tudor domain containing 9 involved_in ISO (PMID:28633017) UniProt PMID:28633017 NCBI chrNW_004955538:2,667,219...2,749,805
Ensembl chrNW_004955538:2,667,299...2,749,248 		JBrowse link
zymogen inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Furin furin, paired basic amino acid cleaving enzyme involved_in ISO (PMID:11799113), (PMID:9130696) UniProt PMID:9130696 PMID:11799113 NCBI chrNW_004955416:14,915,031...14,947,634
Ensembl chrNW_004955416:14,936,546...14,949,252 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12572
    cellular process 12010
      metabolic process 7974
        biosynthetic process 5509
          macromolecule biosynthetic process 4802
            gene expression 4465
              negative regulation of gene expression 973
                mRNA catabolic process + 201
                mRNA destabilization + 78
                negative regulation of RNA splicing + 28
                negative regulation of cytokine production + 277
                negative regulation of gene expression, epigenetic + 136
                negative regulation of miRNA processing + 10
                negative regulation of oxytocin production 0
                negative regulation of production of molecular mediator of immune response + 41
                negative regulation of protein maturation + 24
                negative regulation of rRNA processing 1
                negative regulation of snoRNA processing 0
                negative regulation of tRNA processing 0
                negative regulation of translation + 99
                post-transcriptional gene silencing + 62
                programmed DNA elimination + 0
                regulatory ncRNA-mediated gene silencing + 105
                transcriptional attenuation + 0
Path 2
Term Annotations click to browse term
  biological_process 12572
    biological regulation 9067
      regulation of biological process 8766
        regulation of cellular process 8474
          regulation of metabolic process 5075
            regulation of biosynthetic process 3915
              regulation of macromolecule biosynthetic process 3726
                regulation of gene expression 3616
                  negative regulation of gene expression 973
                    mRNA catabolic process + 201
                    mRNA destabilization + 78
                    negative regulation of RNA splicing + 28
                    negative regulation of cytokine production + 277
                    negative regulation of gene expression, epigenetic + 136
                    negative regulation of miRNA processing + 10
                    negative regulation of oxytocin production 0
                    negative regulation of production of molecular mediator of immune response + 41
                    negative regulation of protein maturation + 24
                    negative regulation of rRNA processing 1
                    negative regulation of snoRNA processing 0
                    negative regulation of tRNA processing 0
                    negative regulation of translation + 99
                    post-transcriptional gene silencing + 62
                    programmed DNA elimination + 0
                    regulatory ncRNA-mediated gene silencing + 105
                    transcriptional attenuation + 0
paths to the root