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Gene: Fastkd3 (FAST kinase domains 3) Chinchilla lanigera

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Symbol:

Fastkd3

Name:

FAST kinase domains 3

RGD ID:

8786525

Description:

INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of mitochondrial mRNA stability (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

FAST kinase domain-containing protein 3

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FASTKD3 (FAST kinase domains 3)	NCBI	Ortholog
Mus musculus (house mouse):	Fastkd3 (FAST kinase domains 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Fastkd3 (FAST kinase domains 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FASTKD3 (FAST kinase domains 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FASTKD3 (FAST kinase domains 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fastkd3 (FAST kinase domains 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FASTKD3 (FAST kinase domains 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FASTKD3 (FAST kinase domains 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fastkd3 (FAST kinase domains 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955504	5,400,544 - 5,411,401 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955504	5,401,956 - 5,412,216 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitochondrial cytochrome c oxidase assembly (ISO)

positive regulation of mitochondrial translation (ISO)

regulation of mitochondrial mRNA stability (ISO)

Cellular Component

mitochondrion (ISO)

nucleoplasm (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Fastkd3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955504	5,400,544 - 5,411,401 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955504	5,401,956 - 5,412,216 (-)	NCBI	ChiLan1.0	ChiLan1.0

FASTKD3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	7,859,159 - 7,869,031 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	7,859,159 - 7,869,037 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	7,859,272 - 7,869,144 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	7,912,272 - 7,922,115 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	7,900,317 - 7,910,192 (-)	NCBI		Celera
Cytogenetic Map	5	p15.31	NCBI
HuRef	5	7,841,012 - 7,850,887 (-)	NCBI		HuRef
CHM1_1	5	7,859,362 - 7,869,235 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	7,798,283 - 7,808,155 (-)	NCBI		T2T-CHM13v2.0

Fastkd3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	68,730,281 - 68,740,457 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	68,730,353 - 68,740,457 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	68,582,167 - 68,592,338 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	68,582,234 - 68,592,338 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	68,721,125 - 68,731,156 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	69,049,634 - 69,059,708 (+)	NCBI		MGSCv36	mm8
Celera	13	70,942,018 - 70,952,068 (+)	NCBI		Celera
Cytogenetic Map	13	B3	NCBI
cM Map	13	35.55	NCBI

Fastkd3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	36,686,727 - 36,695,376 (-)	NCBI		GRCr8
mRatBN7.2	1	34,858,342 - 34,866,988 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	34,858,219 - 34,866,973 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	34,719,673 - 34,728,205 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	40,710,527 - 40,719,059 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	34,885,231 - 34,893,763 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	37,734,400 - 37,742,932 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	37,734,403 - 37,742,932 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	39,116,024 - 39,124,660 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	5,077,472 - 5,086,004 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	5,077,471 - 5,086,062 (-)	NCBI
Celera	1	33,427,815 - 33,436,347 (-)	NCBI		Celera
Cytogenetic Map	1	p11	NCBI

FASTKD3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	8,114,702 - 8,124,579 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	6,268,305 - 6,278,188 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	8,185,897 - 8,195,780 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	8,007,434 - 8,017,315 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	8,003,812 - 8,017,309 (-)	Ensembl	panpan1.1		panPan2

FASTKD3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	6,100,410 - 6,109,878 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	6,099,846 - 6,228,301 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	10,608,384 - 10,617,856 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	6,005,803 - 6,015,284 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	6,005,838 - 6,134,385 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	6,055,574 - 6,065,042 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	6,036,349 - 6,045,816 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	6,249,220 - 6,258,702 (+)	NCBI		UU_Cfam_GSD_1.0

Fastkd3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	239,023,104 - 239,033,644 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936643	369,121 - 379,954 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936643	369,145 - 379,691 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FASTKD3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	74,270,935 - 74,279,524 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	74,270,918 - 74,279,528 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	80,323,528 - 80,332,154 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FASTKD3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	7,451,618 - 7,461,465 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	7,454,101 - 7,461,256 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666064	21,155,804 - 21,168,951 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fastkd3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624751	5,435,854 - 5,445,200 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624751	5,435,924 - 5,445,203 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005407074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005407075	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005407076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013505894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01064898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01163023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000008015 ⟹ ENSCLAP00000007895

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955504	5,400,544 - 5,411,401 (-)	Ensembl

RefSeq Acc Id:

XM_005407074 ⟹ XP_005407131

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955504	5,401,956 - 5,412,212 (-)	NCBI

Sequence:

show sequence

CTGCCTACGGTGGCCCGCGAGGCTTTCCCCCTCCGTCTGTTGTGGGAGCGCAGCTCTGGCGCGG
CTTGATTCATAAATATTGATGTTTTAGTGTGTGACGTTCTCAGTGTATTTGACCTCTTTTTCTT
CCTGGTAAAGCAAGAGTTGAGAATCAGATGGCATGGCATCAATCACCTTGTGGAGGAACTTCTG
TCATCTCGCTGATGTCCGGTTGTGTGGAGGAGGTCTGTCTGCTCTGAAAAGTCGCCCTGTAAAT
CCCATTAACCAGGCAGTGAGGGGGCATCTGCATGCTTGGTTCTGTTCCCTGCAGCCTGAACCTC
TCAGGGTGGTGTCCCTTCCTGCCCGCGGGAAGAAGTTCCATTCAGAGAATGGGAATGACCTTCA
CCCACTGGGTGAGCAGAGGTTCTCTCAAGTGCACAGCTGGGACAGGCTTGACCGAAATCTTAAC
AGCGAAGACGAACAGATGTTTTACAGGAGACTAAACAGCCTGACCTCGTGGGAAGAGGTGTTAA
GTTTCATAAGCACACTGGAGGTTCTGCCTGATGCTATGGCTGCAGGAGCTTTGCAGCGCATTTG
TGAAGTGGGAAAAGGAGATGGTGATCAAAGGCTGCCAAAGGCAATACTAGAGAATAGCATCTTC
CAAGCTTTGTGCTTTCGGTTTGAACAGCAACCCGCGCTTCTGTCAAACACTGGTCTGGTGACTA
CTTTGCAAGCTCTGGTTCTGTTGCATGCGGATCATCAGAGTAGCCTGATCCTAAGCCTGGTGGC
GGAATGCCAGAAACGTCTCCAAACTGGTGTCCTGGAAGCTGCCGATCTTTGCATTCTTGGGGAA
ACTCTGATTAGACTGCAAGGCCCAGGTTGTGTGATGCTAGAACTGATTTTACATCAACTGCAAA
GTAAAAGACTGGAAACATTTACCCCAGAAAATACTGTGGCCTTTTATAGAATACTGCAGACGCG
TGCTGAAAAAGTAGACCAACACCAAACGTTTTTAAATAGGATAAACAACTTCTCTCTTTCTGTC
ATTCACTGCCTGAGTCCTAAGTCAGTCAGCCAAATGCTGGCTGCCCTGGTGGTCCTTGATCAGA
CTCAAGCATGGCGTCTCATTATGAAATTGGGTAAATATGTCGTGAGGTACATTCCTCATTTCAA
CAATGAAGAACTCGGGAAAGTCTTAGAGGCTTTCACATATTTTGGATACAGTGACAGGTTTTTT
ACAAAGGCCCTGGAGGAGCATGTAGCATCACACTGCCTCAGCCTGGACCCAGAAGTTGTCAGTA
AAGTCATGGGATACTGCAGTAGAAACCTGATTCTTTCAAAACCCATTCTTAATGCAGTGGCAGA
AACTTTTGTTTGCCAGTCGGAAAAATTTTCACCTGCTCAGATTTCTGAATTAATCGAACCGTTC
GGCAAACTCAATTATTTGCCACCAAATGCCTCTGCCTTCTTTAGGAAGCTAGAAAATGTGCTGT
CCATGGATTTCAATCATTTTCCACCCAAAATGCTCCTGCGAGTTCTCCATTCCTGTTCGCTTGT
TGAATGCCACCCTGTCAACTTTATGGCAAAAATATTCAGCCCGTTCTTTCTTCAGCAGCTTCAA
GGTGAAGAGTCATATGTGGACAGACTGAGCCTGGCACGACTGACCCAACTTTTCCTCACGTGTG
TCCTAGAGTGCCCTTTCTATAAGGGTCCGAAACTTTTTCCTAAGTTCCAAGTGCAATCATTTCT
CACGCCATGCTGTTCTCTGGAGACCCCAGTGGATTTTCTTCTTTGTAAATATGTAATAACTGCA
CTGGTTGACCTTTTAGGAGCTAGAAGGTATTTTACTTCGAAAGTGCTAACACCCTACTGTTATA
CCTTAGATGTTGAAATTAAACTAGATGAAGAAGGCTTTGTATTACCCTTTACAGCTAATGAAGA
TGTCCATAAAAGGGTAGCACTGTGCATTGATGGTCCCGACAGATTCTGCTCGAACAGCAGTCAC
TTACTGGGGAAAGAAGCCGCGAAACAAAGACACCTGCGATTGCTTGGCTATCAGGTTGTTCAGG
TCCCCTATCATGAGGTGGAGACGCTGAAATCCAGGCTTGCGTTGGTGGAATATTTACAAGGCAA
ACTTTTCCCTCAGAACTCCCTTGTTCACCGCTAACAAGGGGACCGGCTTCCGGACACGAAGAGT
GCTAGAACCTGTGTTCTGGAGGGACAGGTTAGGAAGAAAAAGTGATTTTTGAATGAGTCGTGTT
GCCCTATTTTGTGTATGGACTGGTGATCTGAAAAAGAGTGTGGTTTTCCTTATACCATGTGTAT
ATTTATTTGTAGTAGATTTAAAATAATGCTAGTGTCAGATATTTTTACACACCAGATCAAATTG
ATCAAGTATAATAAACAATAAATGTTCCTTTTGAATCTTT

hide sequence

RefSeq Acc Id:

XM_005407075 ⟹ XP_005407132

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955504	5,401,956 - 5,412,205 (-)	NCBI

Sequence:

show sequence

CGGTGGCCCGCGAGGCTTTCCCCCTCCGTCTGTTGTGGGAGCGCAGCTCTGGCGCGGCTTGCAA
GAGTTGAGAATCAGATGGCATGGCATCAATCACCTTGTGGAGGAACTTCTGTCATCTCGCTGAT
GTCCGGTTGTGTGGAGGAGGTCTGTCTGCTCTGAAAAGTCGCCCTGTAAATCCCATTAACCAGG
CAGTGAGGGGGCATCTGCATGCTTGGTTCTGTTCCCTGCAGCCTGAACCTCTCAGGGTGGTGTC
CCTTCCTGCCCGCGGGAAGAAGTTCCATTCAGAGAATGGGAATGACCTTCACCCACTGGGTGAG
CAGAGGTTCTCTCAAGTGCACAGCTGGGACAGGCTTGACCGAAATCTTAACAGCGAAGACGAAC
AGATGTTTTACAGGAGACTAAACAGCCTGACCTCGTGGGAAGAGGTGTTAAGTTTCATAAGCAC
ACTGGAGGTTCTGCCTGATGCTATGGCTGCAGGAGCTTTGCAGCGCATTTGTGAAGTGGGAAAA
GGAGATGGTGATCAAAGGCTGCCAAAGGCAATACTAGAGAATAGCATCTTCCAAGCTTTGTGCT
TTCGGTTTGAACAGCAACCCGCGCTTCTGTCAAACACTGGTCTGGTGACTACTTTGCAAGCTCT
GGTTCTGTTGCATGCGGATCATCAGAGTAGCCTGATCCTAAGCCTGGTGGCGGAATGCCAGAAA
CGTCTCCAAACTGGTGTCCTGGAAGCTGCCGATCTTTGCATTCTTGGGGAAACTCTGATTAGAC
TGCAAGGCCCAGGTTGTGTGATGCTAGAACTGATTTTACATCAACTGCAAAGTAAAAGACTGGA
AACATTTACCCCAGAAAATACTGTGGCCTTTTATAGAATACTGCAGACGCGTGCTGAAAAAGTA
GACCAACACCAAACGTTTTTAAATAGGATAAACAACTTCTCTCTTTCTGTCATTCACTGCCTGA
GTCCTAAGTCAGTCAGCCAAATGCTGGCTGCCCTGGTGGTCCTTGATCAGACTCAAGCATGGCG
TCTCATTATGAAATTGGGTAAATATGTCGTGAGGTACATTCCTCATTTCAACAATGAAGAACTC
GGGAAAGTCTTAGAGGCTTTCACATATTTTGGATACAGTGACAGGTTTTTTACAAAGGCCCTGG
AGGAGCATGTAGCATCACACTGCCTCAGCCTGGACCCAGAAGTTGTCAGTAAAGTCATGGGATA
CTGCAGTAGAAACCTGATTCTTTCAAAACCCATTCTTAATGCAGTGGCAGAAACTTTTGTTTGC
CAGTCGGAAAAATTTTCACCTGCTCAGATTTCTGAATTAATCGAACCGTTCGGCAAACTCAATT
ATTTGCCACCAAATGCCTCTGCCTTCTTTAGGAAGCTAGAAAATGTGCTGTCCATGGATTTCAA
TCATTTTCCACCCAAAATGCTCCTGCGAGTTCTCCATTCCTGTTCGCTTGTTGAATGCCACCCT
GTCAACTTTATGGCAAAAATATTCAGCCCGTTCTTTCTTCAGCAGCTTCAAGGTGAAGAGTCAT
ATGTGGACAGACTGAGCCTGGCACGACTGACCCAACTTTTCCTCACGTGTGTCCTAGAGTGCCC
TTTCTATAAGGGTCCGAAACTTTTTCCTAAGTTCCAAGTGCAATCATTTCTCACGCCATGCTGT
TCTCTGGAGACCCCAGTGGATTTTCTTCTTTGTAAATATGTAATAACTGCACTGGTTGACCTTT
TAGGAGCTAGAAGGTATTTTACTTCGAAAGTGCTAACACCCTACTGTTATACCTTAGATGTTGA
AATTAAACTAGATGAAGAAGGCTTTGTATTACCCTTTACAGCTAATGAAGATGTCCATAAAAGG
GTAGCACTGTGCATTGATGGTCCCGACAGATTCTGCTCGAACAGCAGTCACTTACTGGGGAAAG
AAGCCGCGAAACAAAGACACCTGCGATTGCTTGGCTATCAGGTTGTTCAGGTCCCCTATCATGA
GGTGGAGACGCTGAAATCCAGGCTTGCGTTGGTGGAATATTTACAAGGCAAACTTTTCCCTCAG
AACTCCCTTGTTCACCGCTAACAAGGGGACCGGCTTCCGGACACGAAGAGTGCTAGAACCTGTG
TTCTGGAGGGACAGGTTAGGAAGAAAAAGTGATTTTTGAATGAGTCGTGTTGCCCTATTTTGTG
TATGGACTGGTGATCTGAAAAAGAGTGTGGTTTTCCTTATACCATGTGTATATTTATTTGTAGT
AGATTTAAAATAATGCTAGTGTCAGATATTTTTACACACCAGATCAAATTGATCAAGTATAATA
AACAATAAATGTTCCTTTTGAATCTTT

hide sequence

RefSeq Acc Id:

XM_005407076 ⟹ XP_005407133

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955504	5,401,956 - 5,412,216 (-)	NCBI

Sequence:

show sequence

CCGTCTGCCTACGGTGGCCCGCGAGGCTTTCCCCCTCCGTCTGTTGTGGGAGCGCAGCTCTGGC
GCGGCTTGAGTTGAGAATCAGATGGCATGGCATCAATCACCTTGTGGAGGAACTTCTGTCATCT
CGCTGATGTCCGGTTGTGTGGAGGAGGTCTGTCTGCTCTGAAAAGTCGCCCTGTAAATCCCATT
AACCAGGCAGTGAGGGGGCATCTGCATGCTTGGTTCTGTTCCCTGCAGCCTGAACCTCTCAGGG
TGGTGTCCCTTCCTGCCCGCGGGAAGAAGTTCCATTCAGAGAATGGGAATGACCTTCACCCACT
GGGTGAGCAGAGGTTCTCTCAAGTGCACAGCTGGGACAGGCTTGACCGAAATCTTAACAGCGAA
GACGAACAGATGTTTTACAGGAGACTAAACAGCCTGACCTCGTGGGAAGAGGTGTTAAGTTTCA
TAAGCACACTGGAGGTTCTGCCTGATGCTATGGCTGCAGGAGCTTTGCAGCGCATTTGTGAAGT
GGGAAAAGGAGATGGTGATCAAAGGCTGCCAAAGGCAATACTAGAGAATAGCATCTTCCAAGCT
TTGTGCTTTCGGTTTGAACAGCAACCCGCGCTTCTGTCAAACACTGGTCTGGTGACTACTTTGC
AAGCTCTGGTTCTGTTGCATGCGGATCATCAGAGTAGCCTGATCCTAAGCCTGGTGGCGGAATG
CCAGAAACGTCTCCAAACTGGTGTCCTGGAAGCTGCCGATCTTTGCATTCTTGGGGAAACTCTG
ATTAGACTGCAAGGCCCAGGTTGTGTGATGCTAGAACTGATTTTACATCAACTGCAAAGTAAAA
GACTGGAAACATTTACCCCAGAAAATACTGTGGCCTTTTATAGAATACTGCAGACGCGTGCTGA
AAAAGTAGACCAACACCAAACGTTTTTAAATAGGATAAACAACTTCTCTCTTTCTGTCATTCAC
TGCCTGAGTCCTAAGTCAGTCAGCCAAATGCTGGCTGCCCTGGTGGTCCTTGATCAGACTCAAG
CATGGCGTCTCATTATGAAATTGGGTAAATATGTCGTGAGGTACATTCCTCATTTCAACAATGA
AGAACTCGGGAAAGTCTTAGAGGCTTTCACATATTTTGGATACAGTGACAGGTTTTTTACAAAG
GCCCTGGAGGAGCATGTAGCATCACACTGCCTCAGCCTGGACCCAGAAGTTGTCAGTAAAGTCA
TGGGATACTGCAGTAGAAACCTGATTCTTTCAAAACCCATTCTTAATGCAGTGGCAGAAACTTT
TGTTTGCCAGTCGGAAAAATTTTCACCTGCTCAGATTTCTGAATTAATCGAACCGTTCGGCAAA
CTCAATTATTTGCCACCAAATGCCTCTGCCTTCTTTAGGAAGCTAGAAAATGTGCTGTCCATGG
ATTTCAATCATTTTCCACCCAAAATGCTCCTGCGAGTTCTCCATTCCTGTTCGCTTGTTGAATG
CCACCCTGTCAACTTTATGGCAAAAATATTCAGCCCGTTCTTTCTTCAGCAGCTTCAAGGTGAA
GAGTCATATGTGGACAGACTGAGCCTGGCACGACTGACCCAACTTTTCCTCACGTGTGTCCTAG
AGTGCCCTTTCTATAAGGGTCCGAAACTTTTTCCTAAGTTCCAAGTGCAATCATTTCTCACGCC
ATGCTGTTCTCTGGAGACCCCAGTGGATTTTCTTCTTTGTAAATATGTAATAACTGCACTGGTT
GACCTTTTAGGAGCTAGAAGGTATTTTACTTCGAAAGTGCTAACACCCTACTGTTATACCTTAG
ATGTTGAAATTAAACTAGATGAAGAAGGCTTTGTATTACCCTTTACAGCTAATGAAGATGTCCA
TAAAAGGGTAGCACTGTGCATTGATGGTCCCGACAGATTCTGCTCGAACAGCAGTCACTTACTG
GGGAAAGAAGCCGCGAAACAAAGACACCTGCGATTGCTTGGCTATCAGGTTGTTCAGGTCCCCT
ATCATGAGGTGGAGACGCTGAAATCCAGGCTTGCGTTGGTGGAATATTTACAAGGCAAACTTTT
CCCTCAGAACTCCCTTGTTCACCGCTAACAAGGGGACCGGCTTCCGGACACGAAGAGTGCTAGA
ACCTGTGTTCTGGAGGGACAGGTTAGGAAGAAAAAGTGATTTTTGAATGAGTCGTGTTGCCCTA
TTTTGTGTATGGACTGGTGATCTGAAAAAGAGTGTGGTTTTCCTTATACCATGTGTATATTTAT
TTGTAGTAGATTTAAAATAATGCTAGTGTCAGATATTTTTACACACCAGATCAAATTGATCAAG
TATAATAAACAATAAATGTTCCTTTTGAATCTTT

hide sequence

RefSeq Acc Id:

XM_013505894 ⟹ XP_013361348

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955504	5,404,473 - 5,412,214 (-)	NCBI

Sequence:

show sequence

GTCTGCCTACGGTGGCCCGCGAGGCTTTCCCCCTCCGTCTGTTGTGGGAGCGCAGCTCTGGCGC
GGCTTGATTCATAAATATTGATGTTTTAGTGTGTGACGTTCTCAGTGTATTTGACCTCTTTTTC
TTCCTGGTAAAGCAAGAGTTGAGAATCAGATGGCATGGCATCAATCACCTTGTGGAGGAACTTC
TGTCATCTCGCTGATGTCCGGTTGTGTGGAGGAGGTCTGTCTGCTCTGAAAAGTCGCCCTGTAA
ATCCCATTAACCAGGCAGTGAGGGGGCATCTGCATGCTTGGTTCTGTTCCCTGCAGCCTGAACC
TCTCAGGGTGGTGTCCCTTCCTGCCCGCGGGAAGAAGTTCCATTCAGAGAATGGGAATGACCTT
CACCCACTGGGTGAGCAGAGGTTCTCTCAAGTGCACAGCTGGGACAGGCTTGACCGAAATCTTA
ACAGCGAAGACGAACAGATGTTTTACAGGAGACTAAACAGCCTGACCTCGTGGGAAGAGGTGTT
AAGTTTCATAAGCACACTGGAGGTTCTGCCTGATGCTATGGCTGCAGGAGCTTTGCAGCGCATT
TGTGAAGTGGGAAAAGGAGATGGTGATCAAAGGCTGCCAAAGGCAATACTAGAGAATAGCATCT
TCCAAGCTTTGTGCTTTCGGTTTGAACAGCAACCCGCGCTTCTGTCAAACACTGGTCTGGTGAC
TACTTTGCAAGCTCTGGTTCTGTTGCATGCGGATCATCAGAGTAGCCTGATCCTAAGCCTGGTG
GCGGAATGCCAGAAACGTCTCCAAACTGGTGTCCTGGAAGCTGCCGATCTTTGCATTCTTGGGG
AAACTCTGATTAGACTGCAAGGCCCAGGTTGTGTGATGCTAGAACTGATTTTACATCAACTGCA
AAGTAAAAGACTGGAAACATTTACCCCAGAAAATACTGTGGCCTTTTATAGAATACTGCAGACG
CGTGCTGAAAAAGTAGACCAACACCAAACGTTTTTAAATAGGATAAACAACTTCTCTCTTTCTG
TCATTCACTGCCTGAGTCCTAAGTCAGTCAGCCAAATGCTGGCTGCCCTGGTGGTCCTTGATCA
GACTCAAGCATGGCGTCTCATTATGAAATTGGGTAAATATGTCGTGAGGTACATTCCTCATTTC
AACAATGAAGAACTCGGGAAAGTCTTAGAGGCTTTCACATATTTTGGATACAGTGACAGGTTTT
TTACAAAGGCCCTGGAGGAGCATGTAGCATCACACTGCCTCAGCCTGGACCCAGAAGTTGTCAG
TAAAGTCATGGGATACTGCAGTAGAAACCTGATTCTTTCAAAACCCATTCTTAATGCAGTGGCA
GAAACTTTTGTTTGCCAGTCGGAAAAATTTTCACCTGCTCAGATTTCTGAATTAATCGAACCGT
TCGGCAAACTCAATTATTTGCCACCAAATGCCTCTGCCTTCTTTAGGAAGCTAGAAAATGTGCT
GTCCATGGATTTCAATCATTTTCCACCCAAAATGCTCCTGCGAGTTCTCCATTCCTGTTCGCTT
GTTGAATGCCACCCTGTCAACTTTATGGCAAAAATATTCAGCCCGTTCTTTCTTCAGCAGCTTC
AAGGTGAAGAGTCATATGTGGACAGACTGAGCCTGGCACGACTGACCCAACTTTTCCTCACGTG
TGTCCTAGAGTGCCCTTTCTATAAGGGTCCGAAACTTTTTCCTAAGTTCCAAGTGCAATCATTT
CTCACGCCATGCTGTTCTCTGGAGACCCCAGTGGATTTTCTTCTTTGTAAATATGTAATAACTG
CACTGGTTGACCTTTTAGGAGCTAGAAGGTATTTTACTTCGAAAGTGCTAACACCCTACTGTTA
TACCTTAGCCTTCACCCACTGATAAATGCAATTGGAAGCGGATACAAAGGAATGCAGGAAGAGT
GTTTGTGAGGGTATCACAGGCGGGATTTTCCTTTCTTCTC

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Protein Sequences


Protein RefSeqs	XP_005407131	(Get FASTA)	NCBI Sequence Viewer
	XP_005407132	(Get FASTA)	NCBI Sequence Viewer
	XP_005407133	(Get FASTA)	NCBI Sequence Viewer
	XP_013361348	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000007895
	ENSCLAP00000007895.1

RefSeq Acc Id:	XP_005407133 ⟸ XM_005407076
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YLQ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASITLWRNFCHLADVRLCGGGLSALKSRPVNPINQAVRGHLHAWFCSLQPEPLRVVSLPARGK KFHSENGNDLHPLGEQRFSQVHSWDRLDRNLNSEDEQMFYRRLNSLTSWEEVLSFISTLEVLPD AMAAGALQRICEVGKGDGDQRLPKAILENSIFQALCFRFEQQPALLSNTGLVTTLQALVLLHAD HQSSLILSLVAECQKRLQTGVLEAADLCILGETLIRLQGPGCVMLELILHQLQSKRLETFTPEN TVAFYRILQTRAEKVDQHQTFLNRINNFSLSVIHCLSPKSVSQMLAALVVLDQTQAWRLIMKLG KYVVRYIPHFNNEELGKVLEAFTYFGYSDRFFTKALEEHVASHCLSLDPEVVSKVMGYCSRNLI LSKPILNAVAETFVCQSEKFSPAQISELIEPFGKLNYLPPNASAFFRKLENVLSMDFNHFPPKM LLRVLHSCSLVECHPVNFMAKIFSPFFLQQLQGEESYVDRLSLARLTQLFLTCVLECPFYKGPK LFPKFQVQSFLTPCCSLETPVDFLLCKYVITALVDLLGARRYFTSKVLTPYCYTLDVEIKLDEE GFVLPFTANEDVHKRVALCIDGPDRFCSNSSHLLGKEAAKQRHLRLLGYQVVQVPYHEVETLKS RLALVEYLQGKLFPQNSLVHR hide sequence

RefSeq Acc Id:	XP_005407132 ⟸ XM_005407075
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YLQ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASITLWRNFCHLADVRLCGGGLSALKSRPVNPINQAVRGHLHAWFCSLQPEPLRVVSLPARGK KFHSENGNDLHPLGEQRFSQVHSWDRLDRNLNSEDEQMFYRRLNSLTSWEEVLSFISTLEVLPD AMAAGALQRICEVGKGDGDQRLPKAILENSIFQALCFRFEQQPALLSNTGLVTTLQALVLLHAD HQSSLILSLVAECQKRLQTGVLEAADLCILGETLIRLQGPGCVMLELILHQLQSKRLETFTPEN TVAFYRILQTRAEKVDQHQTFLNRINNFSLSVIHCLSPKSVSQMLAALVVLDQTQAWRLIMKLG KYVVRYIPHFNNEELGKVLEAFTYFGYSDRFFTKALEEHVASHCLSLDPEVVSKVMGYCSRNLI LSKPILNAVAETFVCQSEKFSPAQISELIEPFGKLNYLPPNASAFFRKLENVLSMDFNHFPPKM LLRVLHSCSLVECHPVNFMAKIFSPFFLQQLQGEESYVDRLSLARLTQLFLTCVLECPFYKGPK LFPKFQVQSFLTPCCSLETPVDFLLCKYVITALVDLLGARRYFTSKVLTPYCYTLDVEIKLDEE GFVLPFTANEDVHKRVALCIDGPDRFCSNSSHLLGKEAAKQRHLRLLGYQVVQVPYHEVETLKS RLALVEYLQGKLFPQNSLVHR hide sequence

RefSeq Acc Id:	XP_005407131 ⟸ XM_005407074
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YLQ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASITLWRNFCHLADVRLCGGGLSALKSRPVNPINQAVRGHLHAWFCSLQPEPLRVVSLPARGK KFHSENGNDLHPLGEQRFSQVHSWDRLDRNLNSEDEQMFYRRLNSLTSWEEVLSFISTLEVLPD AMAAGALQRICEVGKGDGDQRLPKAILENSIFQALCFRFEQQPALLSNTGLVTTLQALVLLHAD HQSSLILSLVAECQKRLQTGVLEAADLCILGETLIRLQGPGCVMLELILHQLQSKRLETFTPEN TVAFYRILQTRAEKVDQHQTFLNRINNFSLSVIHCLSPKSVSQMLAALVVLDQTQAWRLIMKLG KYVVRYIPHFNNEELGKVLEAFTYFGYSDRFFTKALEEHVASHCLSLDPEVVSKVMGYCSRNLI LSKPILNAVAETFVCQSEKFSPAQISELIEPFGKLNYLPPNASAFFRKLENVLSMDFNHFPPKM LLRVLHSCSLVECHPVNFMAKIFSPFFLQQLQGEESYVDRLSLARLTQLFLTCVLECPFYKGPK LFPKFQVQSFLTPCCSLETPVDFLLCKYVITALVDLLGARRYFTSKVLTPYCYTLDVEIKLDEE GFVLPFTANEDVHKRVALCIDGPDRFCSNSSHLLGKEAAKQRHLRLLGYQVVQVPYHEVETLKS RLALVEYLQGKLFPQNSLVHR hide sequence

RefSeq Acc Id:

XP_013361348 ⟸ XM_013505894

- Peptide Label:

isoform X2

- Sequence:

show sequence

MASITLWRNFCHLADVRLCGGGLSALKSRPVNPINQAVRGHLHAWFCSLQPEPLRVVSLPARGK
KFHSENGNDLHPLGEQRFSQVHSWDRLDRNLNSEDEQMFYRRLNSLTSWEEVLSFISTLEVLPD
AMAAGALQRICEVGKGDGDQRLPKAILENSIFQALCFRFEQQPALLSNTGLVTTLQALVLLHAD
HQSSLILSLVAECQKRLQTGVLEAADLCILGETLIRLQGPGCVMLELILHQLQSKRLETFTPEN
TVAFYRILQTRAEKVDQHQTFLNRINNFSLSVIHCLSPKSVSQMLAALVVLDQTQAWRLIMKLG
KYVVRYIPHFNNEELGKVLEAFTYFGYSDRFFTKALEEHVASHCLSLDPEVVSKVMGYCSRNLI
LSKPILNAVAETFVCQSEKFSPAQISELIEPFGKLNYLPPNASAFFRKLENVLSMDFNHFPPKM
LLRVLHSCSLVECHPVNFMAKIFSPFFLQQLQGEESYVDRLSLARLTQLFLTCVLECPFYKGPK
LFPKFQVQSFLTPCCSLETPVDFLLCKYVITALVDLLGARRYFTSKVLTPYCYTLAFTH

hide sequence

Ensembl Acc Id:

ENSCLAP00000007895 ⟸ ENSCLAT00000008015

Protein Domains

RAP

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005534	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000008015	ENTREZGENE
	ENSCLAT00000008015.1	UniProtKB/TrEMBL
InterPro	FAST_2	UniProtKB/TrEMBL
	FAST_kinase	UniProtKB/TrEMBL
	FAST_Leu-rich	UniProtKB/TrEMBL
	RAP	UniProtKB/TrEMBL
NCBI Gene	Fastkd3	ENTREZGENE
PANTHER	FAST KINASE DOMAIN-CONTAINING PROTEIN 3, MITOCHONDRIAL	UniProtKB/TrEMBL
	FAST LEU-RICH DOMAIN-CONTAINING	UniProtKB/TrEMBL
Pfam	FAST_1	UniProtKB/TrEMBL
	FAST_2	UniProtKB/TrEMBL
	RAP	UniProtKB/TrEMBL
PROSITE	RAP	UniProtKB/TrEMBL
SMART	RAP	UniProtKB/TrEMBL
UniProt	A0A8C2YLQ2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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