Hdac9 (histone deacetylase 9) - Rat Genome Database

Name: Hdac9
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Hdac9 (histone deacetylase 9) Chinchilla lanigera

Analyze

Symbol:

Hdac9

Name:

histone deacetylase 9

RGD ID:

8702771

Description:

ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cholesterol homeostasis (ortholog); determination of adult lifespan (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atherosclerosis (ortholog); Auriculocondylar Syndrome 4 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HDAC9 (histone deacetylase 9)	NCBI	Ortholog
Mus musculus (house mouse):	Hdac9 (histone deacetylase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Hdac9 (histone deacetylase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	HDAC9 (histone deacetylase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	HDAC9 (histone deacetylase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hdac9 (histone deacetylase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	HDAC9 (histone deacetylase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	HDAC9 (histone deacetylase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Hdac9 (histone deacetylase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	21,245,562 - 21,932,023 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	21,046,312 - 21,932,029 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atherosclerosis (ISO)

Auriculocondylar Syndrome 4 (ISO)

genetic disease (ISO)

middle cerebral artery infarction (ISO)

Osteoarthritis, Hip (ISO)

pleomorphic xanthoastrocytoma (ISO)

Stroke (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to insulin stimulus (ISO)

cholesterol homeostasis (ISO)

determination of adult lifespan (ISO)

DNA repair (ISO)

heart development (ISO)

negative regulation of cytokine production (ISO)

negative regulation of DNA-templated transcription (ISO)

negative regulation of gene expression, epigenetic (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

neuron differentiation (ISO)

positive regulation of cell migration involved in sprouting angiogenesis (ISO)

regulation of skeletal muscle fiber development (ISO)

regulation of skeletal muscle fiber differentiation (ISO)

response to amphetamine (ISO)

Cellular Component

cytoplasm (ISO)

histone methyltransferase complex (ISO)

nucleus (ISO)

transcription regulator complex (ISO)

Molecular Function

DNA-binding transcription factor binding (ISO)

histone deacetylase activity (ISO)

histone deacetylase binding (ISO)

histone H3K14 deacetylase activity (ISO)

histone H3K9 deacetylase activity (ISO)

histone H4K16 deacetylase activity (ISO)

protein binding (ISO)

protein kinase C binding (ISO)

protein lysine deacetylase activity (ISO)

RNA polymerase II-specific DNA-binding transcription factor binding (ISO)

transcription corepressor activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

histone modification pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Hdac9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	21,245,562 - 21,932,023 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	21,046,312 - 21,932,029 (+)	NCBI	ChiLan1.0	ChiLan1.0

HDAC9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	18,086,825 - 19,002,416 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	18,086,949 - 19,002,416 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	18,126,448 - 19,042,039 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	18,501,894 - 19,003,518 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	18,309,165 - 18,808,925	NCBI
Celera	7	18,515,050 - 19,016,663 (+)	NCBI		Celera
Cytogenetic Map	7	p21.1	NCBI
HuRef	7	18,012,000 - 18,921,632 (+)	NCBI		HuRef
CHM1_1	7	18,127,641 - 19,037,820 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	18,216,502 - 19,132,425 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	18,254,965 - 19,088,496 (+)	NCBI

Hdac9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	34,097,579 - 34,967,094 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	34,097,579 - 34,967,094 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	34,047,580 - 34,917,095 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	34,047,580 - 34,917,095 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	35,056,362 - 35,213,754 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	34,956,744 - 35,114,121 (-)	NCBI		MGSCv36	mm8
Celera	12	35,799,634 - 35,959,002 (-)	NCBI		Celera
Cytogenetic Map	12	A3	NCBI
cM Map	12	15.06	NCBI

Hdac9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	56,489,472 - 57,351,654 (-)	NCBI		GRCr8
mRatBN7.2	6	50,762,074 - 51,624,311 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	50,763,590 - 51,625,333 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	51,044,408 - 51,614,840 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	51,359,348 - 51,929,789 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	50,815,529 - 51,385,069 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	53,487,367 - 54,358,694 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	53,488,883 - 54,059,119 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	63,109,688 - 63,978,416 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	53,066,308 - 53,114,402 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	6	49,930,173 - 50,491,018 (-)	NCBI		Celera
Cytogenetic Map	6	q16	NCBI

HDAC9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	22,919,135 - 23,830,896 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	71,243,859 - 72,155,637 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	18,740,580 - 19,653,615 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	18,138,665 - 18,975,832 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	18,138,761 - 18,970,717 (+)	Ensembl	panpan1.1		panPan2

HDAC9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	32,469,349 - 33,310,439 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	32,588,414 - 33,304,387 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	31,927,168 - 32,838,858 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	32,319,281 - 33,231,263 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	32,517,048 - 33,226,313 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	32,429,177 - 33,340,446 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	32,129,507 - 33,041,580 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	32,446,823 - 33,358,024 (+)	NCBI		UU_Cfam_GSD_1.0

Hdac9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	76,722,917 - 77,572,050 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936546	4,781,304 - 5,246,939 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936546	4,398,003 - 5,247,649 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HDAC9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	87,449,359 - 88,186,961 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	87,164,400 - 88,192,803 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	278,058,419 - 278,182,393 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HDAC9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	39,159,270 - 39,859,403 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666042	64,474,174 - 65,386,992 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hdac9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	11,431,888 - 11,941,809 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624739	11,431,463 - 12,162,073 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005377344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005377345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005377349	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005377350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005377351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013510571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01011056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011060	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01011066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01088540	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000011605 ⟹ ENSCLAP00000011468

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955410	21,245,562 - 21,931,786 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000011606 ⟹ ENSCLAP00000011469

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955410	21,245,562 - 21,931,786 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000011607 ⟹ ENSCLAP00000011470

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955410	21,402,450 - 21,607,382 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000011608 ⟹ ENSCLAP00000011471

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955410	21,433,051 - 21,932,023 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000011609 ⟹ ENSCLAP00000011472

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955410	21,433,051 - 21,931,786 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000011610 ⟹ ENSCLAP00000011473

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955410	21,433,760 - 21,931,786 (+)	Ensembl

RefSeq Acc Id:

XM_005377344 ⟹ XP_005377401

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955410	21,046,312 - 21,932,029 (+)	NCBI

Sequence:

show sequence

TCCGTCCCCGCGCCTGCTTCCTGCCTCGCCATTCTGCTCTGCTCCCTCGGAAGATGGCTGTTGG
GAGAAGGGGGAGAAGTTAGGGGTCGCCGCGCGGGGCGCGGGGGGCGCGACAGCCTCGGCGGGAG
CGCGCGGAGGTCTCTCCTCTTCAGCCCTTCTTGGACCTCGACTGCCAGCTGAACAAAGACGGTG
AATCTTCATTCTGATCCATCAGTCCTTCAGAATCCCATAATGAGCTCACCAGTACAGCCCGATG
GGGTGGCTGGACGGGAGCAGCTCTTGGCTCAGCAAAGAATGCACAGTATGATCAGCTCAGTGGA
TGTGAAGTCAGAGGTTCCTGTGGGCCTGGAGCCCATCTCACCTCTAGACCTAAGGACAGACCTC
AGAATGATGATGCCGGTGGTGGACCCTGTCGTCCGTGAGAAGCAGCTGCAGCAAGAGTTACTTC
TTATCCAGCAGCAGCAACAAATCCAGAAGCAGCTCCTGATAGCGGAGTTTCAGAAACAGCACGA
GAACTTGACACGGCAGCACCAGGCTCAGCTTCAGGAGCACATCAAGTTGCAACAGGAACTTCTA
GCCATAAAACAGCAGCAAGAACTCCTAGAAAAGGAGCAGAAACTGGAGCAGCAGAGGCAAGAAC
AGGAAGTAGAGAGGCATCGCAGAGAACAGCAGCTCCCTCCTCTCAGAGGCAAAGATAGAGGACG
AGAAAGGGCAGTGGCAAGTACTGAAGTAAAGCAGAAGCTTCAAGAATTCCTGTTGAGTAAATCA
GCAACGAAAGACACTCCAGCTAATGGAAAAAATCATTCCGTGAGCCGCCATCCCAAGCTCTGGT
ACACGGCTGCCCACCACACATCATTGGATCAAAGCTCTCCACCCCTGAGTGGAACATCTCCATC
CTACAAATATACATTACCAGGAACTCAAGATGCCAAGGATGATTTCCCTCTTCGAAAAACTGCC
TCTGAGCCCAACTTGAAGGTGCGGTCCAGGTTAAAACAGAAAGTGGCAGAGAGGAGAAGCAGCC
CCTTACTCAGGCGGAAGGATGGAAATGTTGTCACTTCATTCAAGAAGCGAATGTTTGAGGTGAC
AGAATCCTCAGTGAGCAGCAGTTCTCCAGGATCTGGTCCCAGTTCACCAAACAATGGACCAACT
GGAAATGTTACTGAAAACGAGACTTCGGTTCTGCCCCCTACTCCTCATGCTGAGCAACTGGTTT
CACAGCAACGCATTCTAATTCATGAAGATTCCATGAACCTGCTAAGTCTTTATACCTCTCCTTC
TTTGCCCAACATTACTTTGGGACTCCCAGCAGGGTCATCCCAGCTCAACGCTTCAAATTCTCTC
AAAGAAAAGCAGAAGTGTGAGACACAGACGCTCAGGCAAGGTGTTCCTCTGCCTGGGCAGTACG
GGGGCAGCATCTCGGCATCTTCAAGCCATCCTCATGTGACTTTAGAGGGAAAGCCCAACAGCAG
CCACCAAGCTCTCCTGCAGCATTTATTATTGAAAGAACAAATGCGACAACAAAAGCTTCTTGTG
GCCGGTGGAGTTCCCTTACATCCACAGTCTCCCTTGGCAACAAAAGAGAGAATTTCACCAGGGA
TTAGAAGCACCCACAAATTGCCCCGTCATAGACCCCTGAATCGAACCCAGTCTGCACCTCTGCC
TCAGAGCACGTTGGCTCAGTTGGTCATTCAGCAGCAACACCAGCAGTTCTTGGAGAAGCAGAAA
CAATACCAGCAGCAGATTCACATGAACAAACTGCTTTCGAAATCTATTGAACAACTGAAGCAAC
CGGGCAGGCACCTTGAGGAAGCCGAGGAAGAGCTTCAGGGGGACCAGGCGATGCAGGAAGACAG
AGCGCCCTCTAGTGACAACAGCACTAGGAGCGACAGCAGTGCTTGTGTGGATGACACTCTGGGA
CAAGTGGCGGCTGTGAAGGTCAAGGAAGAACCAGTGGACAGTGACGAAGATGCTCAGATCCAGG
AAATGGAATCTGGGGAGCAGGCTGCTTTTATGCAACAGCAGCCCTTCCGGGAGCCCGCGCACGC
GCGTGCGCCCTCGGCGCGCCCCGCCCCGCCGGCCGCGGCGGGCACGGACGGACTGGAGAAGCCC
CGGCTGCTCTCGCGGACGCACTCCTCCCCTGCGGCCGCCATCTTGCCCCACCCACCGCCGGACC
GCCCCCTCCAGCCGGGCTCCGCGACTGGAATTGCCTATGACCCTCTGATGCTGAAACACCAGTG
CATCTGTGGCAATTCCACCACCCACCCCGAGCATGCTGGACGAATACAGAGCATCTGGTCACGG
CTGCAAGAAACTGGGCTGCTAAATAAATGTGAGCGAATTCAAGGTCGAAAAGCCAGTCTGGAGG
AAATACAGCTTGTTCATTCTGAACATCACTCACTGTTGTATGGCACCAGCCCCCTGGATGGACA
GAAGCTGGACCCCAGGATCCTCCTAGGTGATGACTCTCAAAAGTTCTTTTCCTCATTACCATGT
GGTGGACTTGGGGTGGACAGTGACACCATTTGGAATGAGCTGCACTCGTCCGGTGCTGCACGCA
TGGCTGTTGGCTGTGTCATCGAACTGGCTTCCAAAGTGGCCTCAGGAGAGCTGAAGAATGGATT
TGCTGTTGTGAGGCCTCCAGGTCATCATGCTGAAGAATCCGCAGCCATGGGGTTCTGCTTTTTT
AATTCAGTTGCAATTACCGCCAAATACTTGCGAGACCAACTAAATATAAGCAAGATATTGATTG
TAGATCTGGATGTTCACCATGGAAACGGTACACAGCAGGCCTTTTATGCTGACCCCAGCATCCT
GTACATTTCACTCCATCGCTATGATGAAGGGAACTTTTTCCCTGGCAGCGGAGCCCCAAATGAG
GTTGGAACGGGCCTTGGAGAAGGATATAATATAAATATTGCCTGGACTGGTGGCCTTGATCCCC
CTATGGGAGATGTTGAGTACCTCGAAGCTTTCAGAACTGTCGTGATGCCTGTGGCCAAAGAGTT
TGATCCAAACATGGTCCTGGTTTCCGCTGGATTTGATGCATTAGAAGGCCACACCCCTCCTCTA
GGAGGGTACAAAGTGACAGCCAAATGCTTTGGTCATTTGACAAAGCAGTTGATGACGTTGGTTG
ATGGACGTGCAGTGTTGGCTCTAGAAGGAGGACACGATCTCACAGCCATTTGTGATGCCTCAGA
AGCTTGCGTCAATGCCCTTCTAGGAAATGAGCTGGAACCACTTGCTGAAGATATTCTCCACCAA
ACCCCGAATATGAATGCTGTGGCTTCTTTACAGAAGATTATTGAAATTCAAAGCAAGTACTGGA
AGTCGGTCAGGATGGTGGCTGTGCCAAGGGGCTGTGCTCTTCCTGGTGCTCAGTTGCAAGAGGA
GACAGAAACTGTTTCAGCTCTGGCCTCCCTGACAGTGGACGTGGAACAGCGCTTTGCTCAGGAA
GACACCAGATTCAAAGGGTTCGATCAATGCATGGTCATCTGGCTCCGTGGCACCAGCACTATGG
CAGAGGACATGCTGGGAGAGTGTGGTGAGGCAATGCTGTGGAACAGCGGGCAGCCAGAAAAAAG
AGAGAGAACTGCTGGTGAGCCCATGGAAGAGGACCCAGCCTTGTGAAGTGCCGAGTCTCCCCCG
ATATTTCCTGTGTGTGACATCATTGTGTATCCCCCCACCCCAGCACCCTCAGACATGTCTTGTC
TGCTGCCTGGGTGGTACAGATTCGATGGAACATAAACACTGGGCACAAAATTCCGAACAGCAGC
TTCACTTGTTCTTTGGAAAGACTTGAAAGGGCATTAAAGATTTCTGAAACGTAACCGCTGTGAT
TCTAAAGTTACAGTAAACCACTATTGGAAGAAA

hide sequence

RefSeq Acc Id:

XM_005377345 ⟹ XP_005377402

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955410	21,402,456 - 21,932,029 (+)	NCBI

Sequence:

show sequence

TGTAGTGAGAAGACAATTGTGGAAAAAGCTGAAAATAATATTAAAATAGTTAGGAATGAAAGAC
ATGTTCTATGCAAATGATGGGGTGGCTGGACGGGAGCAGCTCTTGGCTCAGCAAAGAATGCACA
GTATGATCAGCTCAGTGGATGTGAAGTCAGAGGTTCCTGTGGGCCTGGAGCCCATCTCACCTCT
AGACCTAAGGACAGACCTCAGAATGATGATGCCGGTGGTGGACCCTGTCGTCCGTGAGAAGCAG
CTGCAGCAAGAGTTACTTCTTATCCAGCAGCAGCAACAAATCCAGAAGCAGCTCCTGATAGCGG
AGTTTCAGAAACAGCACGAGAACTTGACACGGCAGCACCAGGCTCAGCTTCAGGAGCACATCAA
GTTGCAACAGGAACTTCTAGCCATAAAACAGCAGCAAGAACTCCTAGAAAAGGAGCAGAAACTG
GAGCAGCAGAGGCAAGAACAGGAAGTAGAGAGGCATCGCAGAGAACAGCAGCTCCCTCCTCTCA
GAGGCAAAGATAGAGGACGAGAAAGGGCAGTGGCAAGTACTGAAGTAAAGCAGAAGCTTCAAGA
ATTCCTGTTGAGTAAATCAGCAACGAAAGACACTCCAGCTAATGGAAAAAATCATTCCGTGAGC
CGCCATCCCAAGCTCTGGTACACGGCTGCCCACCACACATCATTGGATCAAAGCTCTCCACCCC
TGAGTGGAACATCTCCATCCTACAAATATACATTACCAGGAACTCAAGATGCCAAGGATGATTT
CCCTCTTCGAAAAACTGCCTCTGAGCCCAACTTGAAGGTGCGGTCCAGGTTAAAACAGAAAGTG
GCAGAGAGGAGAAGCAGCCCCTTACTCAGGCGGAAGGATGGAAATGTTGTCACTTCATTCAAGA
AGCGAATGTTTGAGGTGACAGAATCCTCAGTGAGCAGCAGTTCTCCAGGATCTGGTCCCAGTTC
ACCAAACAATGGACCAACTGGAAATGTTACTGAAAACGAGACTTCGGTTCTGCCCCCTACTCCT
CATGCTGAGCAACTGGTTTCACAGCAACGCATTCTAATTCATGAAGATTCCATGAACCTGCTAA
GTCTTTATACCTCTCCTTCTTTGCCCAACATTACTTTGGGACTCCCAGCAGGGTCATCCCAGCT
CAACGCTTCAAATTCTCTCAAAGAAAAGCAGAAGTGTGAGACACAGACGCTCAGGCAAGGTGTT
CCTCTGCCTGGGCAGTACGGGGGCAGCATCTCGGCATCTTCAAGCCATCCTCATGTGACTTTAG
AGGGAAAGCCCAACAGCAGCCACCAAGCTCTCCTGCAGCATTTATTATTGAAAGAACAAATGCG
ACAACAAAAGCTTCTTGTGGCCGGTGGAGTTCCCTTACATCCACAGTCTCCCTTGGCAACAAAA
GAGAGAATTTCACCAGGGATTAGAAGCACCCACAAATTGCCCCGTCATAGACCCCTGAATCGAA
CCCAGTCTGCACCTCTGCCTCAGAGCACGTTGGCTCAGTTGGTCATTCAGCAGCAACACCAGCA
GTTCTTGGAGAAGCAGAAACAATACCAGCAGCAGATTCACATGAACAAACTGCTTTCGAAATCT
ATTGAACAACTGAAGCAACCGGGCAGGCACCTTGAGGAAGCCGAGGAAGAGCTTCAGGGGGACC
AGGCGATGCAGGAAGACAGAGCGCCCTCTAGTGACAACAGCACTAGGAGCGACAGCAGTGCTTG
TGTGGATGACACTCTGGGACAAGTGGCGGCTGTGAAGGTCAAGGAAGAACCAGTGGACAGTGAC
GAAGATGCTCAGATCCAGGAAATGGAATCTGGGGAGCAGGCTGCTTTTATGCAACAGCAGCCCT
TCCGGGAGCCCGCGCACGCGCGTGCGCCCTCGGCGCGCCCCGCCCCGCCGGCCGCGGCGGGCAC
GGACGGACTGGAGAAGCCCCGGCTGCTCTCGCGGACGCACTCCTCCCCTGCGGCCGCCATCTTG
CCCCACCCACCGCCGGACCGCCCCCTCCAGCCGGGCTCCGCGACTGGAATTGCCTATGACCCTC
TGATGCTGAAACACCAGTGCATCTGTGGCAATTCCACCACCCACCCCGAGCATGCTGGACGAAT
ACAGAGCATCTGGTCACGGCTGCAAGAAACTGGGCTGCTAAATAAATGTGAGCGAATTCAAGGT
CGAAAAGCCAGTCTGGAGGAAATACAGCTTGTTCATTCTGAACATCACTCACTGTTGTATGGCA
CCAGCCCCCTGGATGGACAGAAGCTGGACCCCAGGATCCTCCTAGGTGATGACTCTCAAAAGTT
CTTTTCCTCATTACCATGTGGTGGACTTGGGGTGGACAGTGACACCATTTGGAATGAGCTGCAC
TCGTCCGGTGCTGCACGCATGGCTGTTGGCTGTGTCATCGAACTGGCTTCCAAAGTGGCCTCAG
GAGAGCTGAAGAATGGATTTGCTGTTGTGAGGCCTCCAGGTCATCATGCTGAAGAATCCGCAGC
CATGGGGTTCTGCTTTTTTAATTCAGTTGCAATTACCGCCAAATACTTGCGAGACCAACTAAAT
ATAAGCAAGATATTGATTGTAGATCTGGATGTTCACCATGGAAACGGTACACAGCAGGCCTTTT
ATGCTGACCCCAGCATCCTGTACATTTCACTCCATCGCTATGATGAAGGGAACTTTTTCCCTGG
CAGCGGAGCCCCAAATGAGGTTGGAACGGGCCTTGGAGAAGGATATAATATAAATATTGCCTGG
ACTGGTGGCCTTGATCCCCCTATGGGAGATGTTGAGTACCTCGAAGCTTTCAGAACTGTCGTGA
TGCCTGTGGCCAAAGAGTTTGATCCAAACATGGTCCTGGTTTCCGCTGGATTTGATGCATTAGA
AGGCCACACCCCTCCTCTAGGAGGGTACAAAGTGACAGCCAAATGCTTTGGTCATTTGACAAAG
CAGTTGATGACGTTGGTTGATGGACGTGCAGTGTTGGCTCTAGAAGGAGGACACGATCTCACAG
CCATTTGTGATGCCTCAGAAGCTTGCGTCAATGCCCTTCTAGGAAATGAGCTGGAACCACTTGC
TGAAGATATTCTCCACCAAACCCCGAATATGAATGCTGTGGCTTCTTTACAGAAGATTATTGAA
ATTCAAAGCAAGTACTGGAAGTCGGTCAGGATGGTGGCTGTGCCAAGGGGCTGTGCTCTTCCTG
GTGCTCAGTTGCAAGAGGAGACAGAAACTGTTTCAGCTCTGGCCTCCCTGACAGTGGACGTGGA
ACAGCGCTTTGCTCAGGAAGACACCAGAACTGCTGGTGAGCCCATGGAAGAGGACCCAGCCTTG
TGAAGTGCCGAGTCTCCCCCGATATTTCCTGTGTGTGACATCATTGTGTATCCCCCCACCCCAG
CACCCTCAGACATGTCTTGTCTGCTGCCTGGGTGGTACAGATTCGATGGAACATAAACACTGGG
CACAAAATTCCGAACAGCAGCTTCACTTGTTCTTTGGAAAGACTTGAAAGGGCATTAAAGATTT
CTGAAACGTAACCGCTGTGATTCTAAAGTTACAGTAAACCACTATTGGAAGAAA

hide sequence

RefSeq Acc Id:

XM_005377349 ⟹ XP_005377406

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955410	21,434,045 - 21,607,382 (+)	NCBI

Sequence:

show sequence

GACTCTTGTTTTTCCTCAGATGGGGTGGCTGGACGGGAGCAGCTCTTGGCTCAGCAAAGAATGC
ACAGTATGATCAGCTCAGTGGATGTGAAGTCAGAGGTTCCTGTGGGCCTGGAGCCCATCTCACC
TCTAGACCTAAGGACAGACCTCAGAATGATGATGCCGGTGGTGGACCCTGTCGTCCGTGAGAAG
CAGCTGCAGCAAGAGTTACTTCTTATCCAGCAGCAGCAACAAATCCAGAAGCAGCTCCTGATAG
CGGAGTTTCAGAAACAGCACGAGAACTTGACACGGCAGCACCAGGCTCAGCTTCAGGAGCACAT
CAAGTTGCAACAGGAACTTCTAGCCATAAAACAGCAGCAAGAACTCCTAGAAAAGGAGCAGAAA
CTGGAGCAGCAGAGGCAAGAACAGGAAGTAGAGAGGCATCGCAGAGAACAGCAGCTCCCTCCTC
TCAGAGGCAAAGATAGAGGACGAGAAAGGGCAGTGGCAAGTACTGAAGTAAAGCAGAAGCTTCA
AGAATTCCTGTTGAGTAAATCAGCAACGAAAGACACTCCAGCTAATGGAAAAAATCATTCCGTG
AGCCGCCATCCCAAGCTCTGGTACACGGCTGCCCACCACACATCATTGGATCAAAGCTCTCCAC
CCCTGAGTGGAACATCTCCATCCTACAAATATACATTACCAGGAACTCAAGATGCCAAGGATGA
TTTCCCTCTTCGAAAAACTGAATCCTCAGTGAGCAGCAGTTCTCCAGGATCTGGTCCCAGTTCA
CCAAACAATGGACCAACTGGAAATGTTACTGAAAACGAGACTTCGGTTCTGCCCCCTACTCCTC
ATGCTGAGCAACTGGTTTCACAGCAACGCATTCTAATTCATGAAGATTCCATGAACCTGCTAAG
TCTTTATACCTCTCCTTCTTTGCCCAACATTACTTTGGGACTCCCAGCAGGGTCATCCCAGCTC
AACGCTTCAAATTCTCTCAAAGAAAAGCAGAAGTGTGAGACACAGACGCTCAGGCAAGGTGTTC
CTCTGCCTGGGCAGTACGGGGGCAGCATCTCGGCATCTTCAAGCCATCCTCATGTGACTTTAGA
GGGAAAGCCCAACAGCAGCCACCAAGCTCTCCTGCAGCATTTATTATTGAAAGAACAAATGCGA
CAACAAAAGCTTCTTGTGGCCGGTGGAGTTCCCTTACATCCACAGTCTCCCTTGGCAACAAAAG
AGAGAATTTCACCAGGGATTAGAAGCACCCACAAATTGCCCCGTCATAGACCCCTGAATCGAAC
CCAGTCTGCACCTCTGCCTCAGAGCACGTTGGCTCAGTTGGTCATTCAGCAGCAACACCAGCAG
TTCTTGGAGAAGCAGAAACAATACCAGCAGCAGATTCACATGAACAAACTGCTTTCGAAATCTA
TTGAACAACTGAAGCAACCGGGCAGGCACCTTGAGGAAGCCGAGGAAGAGCTTCAGGGGGACCA
GGCGATGCAGGAAGACAGAGCGCCCTCTAGTGACAACAGCACTAGGAGCGACAGCAGTGCTTGT
GTGGATGACACTCTGGGACAAGTGGCGGCTGTGAAGGTCAAGGAAGAACCAGTGGACAGTGACG
AAGATGCTCAGATCCAGGAAATGGAATCTGGGGAGCAGGCTGCTTTTATGCAACAGGTAATAGG
CAAAGATTTAGCTCCAGGATTTGTAATTAAAGTCATTATCTGAACATGAAACGCACTGCAGGTT
TTGGTAAATTTCCTATTGGTTTGTATGTCTGGATGACTGATTTTAGTGTCTAAGGATTCGAACA
GAAACAGGTAAATATATATGTGTCTATACAGAGATCGATCTATGGTGATCTCTAAAAAGATAGA
GAAGTTTCATCGAAACTGCATCAATAAAAAAATACCTGTTACACTAAAATTATGCCACGTGATG
TCAAAGTAACTAATAGGCTCTAAATCCATCCCAAGATCTGTTACACCAATTACTTCTAAGCAAA
ATGAACTCACTATTATTTGTAGTTTATCTGTTGAGTTCGGTGACTGCCAGATATAGTCTCTCCC
AGTCTGATCAATGAAGCATTCTATTAATTTTTGATTTTTTTGAACATATGGGAGTCAATTTTCG
CATCATTGTACATAATGTATCATACTACAGTCTGGAACACTGTTAAAGGTAGTCTGCCCCTTCT
TTCCTCTCTCTTTTTTGTTAAGTAGAAGTGTTCTGGTCACTGTGCCAGTAGTCCTAGATTATTG
TGTACATTGCAATTGAAAATAATAGGAATACAGGTGGTTTAAATATAGAGATGCAAATTGGAGT
ACTGTTTTAAACTACTATGTTATGTTTCACATGACACTGTGCATTTTACTTTTATCTTGTGTAA
TTTGATGGCATTGTCTATTGAAAAAAATCAATCGATGCAGATGCACATGTTGGTGAGAAGTAAT
TTGCAGAAATGTGGTCCAATCAGATACTACATAGTATCTACAATTGTAGCAAACACAGTAACAA
TATGATTATCACTTGCTATCACATCAAAATCAGTTTTAAAAGCTGTATGATATTTTATGATTAT
TATCACTAGAATATCTCAAATGTAATTCCATAATGGCATAGCATATGCCATATCATTTTAGCAA
AAAAAAAAAAGGGAAGAAAATTGGGTCTCACAAAAGATTTGACTTGTACATAATGCACCTTCAG
AAAGATTGTGTGCTTTGATGCTATAAAATACAAACATCTTTGAAAGCAACAGAAGACAATGTTT
ATTTAAGTAAGTTCTTTGTCAGGTTCCTGCTGTTCTCCTACAGAAAAGTGGTTCTGTAAGGCTG
AACAGGAAATGCCTTGTGGAAACAGGAAGTCCAAGTGATTCATGTACTGAGGAATGTAGGGAAA
AAAATCTGAGGATAGTGTTTTACTCTTTCTGTTTTTAAAGGGCACTCTATGAATTGATTTATTG
TCTAAGAAAATAACACCACAAGTAGGGAAATTGTTACGGAAGCTTTTCACTGGAACATTTCCTT
CATATTCCCTTTTGATATGTTTACCTTGTTTTATAGGTTTACTTTTGTTAAGCTAGTTAAAGGT
TCGTTGTATTAAGACCTCTTTAATATGGATAATCCAAATTGACCTAGAATCTTTGTGAGGTTTT
TTCTATTAAAATATTTATATTTCTAAATTTGAGGTACTTTAAGGTGTAGTATCCTATTTCAGAG
GAGATACAGCAGTTTTGCCAAATGTAGACATTGTTGAAATGTATGTTATTGGCACGTATTGTTT
ACATTTTGCTGTGACATTTAAAAATATTTCTTTAAAACTGTTACTGCTAAAGATACATTATCCT
TTTTTAAAAAGCTTCCATTCAAATTAAATTAACATAACTAGAAGTTAGAAAGTTTAAAACTTTT
CCATATAATGAACGTCCTGCTGATAATTTGACAAATAGCTATAATAGGCAACACTCCCTGTCAC
CAACATATTTTGGTTAGTATATTTCTTCATATTAAAATGACTTTTTGTCAGTTGTTTTGCATTA
TAAAAATATGGCATGCCTAAGATAAAATTGTATATTTTTCCATCTCATAAATATTCATTTTCTT
CAAAGTCTTTTTTTCCAATCTCATAAAAAAGGGATAGTGCATCTTTTAAAATACATTTTATTTG
GGGAGGAACATGTGGCTGAGCAGACTTTTGTATAATATTACTTCAAAGATATGTAATCACAAAC
AAAAAAACTATTTTTTATAATGTCATTGAGAGAGAGTTTCATCAGTACAGTTGGTGGACATTAC
TTGTTTGAATATGATAGTCTTTGAATTTAATCAGGAAACTACCTGGAACCAGTGAAAAGGAAAG
CTGGACTTAAATAATCTTACAACTAATTGATAAATGTCTCTTTTAAAATCTACTGTATTTATTA
TAATTTACACCCTTGAAGGTGATCTCTTGTTTTGTGTTGTAAATATATTGTTTGTATGTTTCCC
TTCTTGCCTTCTGTTATAAGTCTCTTCCTTTCTCAAATAAAGTTTTTTTTAAAA

hide sequence

RefSeq Acc Id:

XM_005377350 ⟹ XP_005377407

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955410	21,402,450 - 21,607,382 (+)	NCBI

Sequence:

show sequence

AGATACTGTAGTGAGAAGACAATTGTGGAAAAAGCTGAAAATAATATTAAAATAGTTAGGAATG
AAAGACATGTTCTATGCAAATGATGGGGTGGCTGGACGGGAGCAGCTCTTGGCTCAGCAAAGAA
TGCACAGTATGATCAGCTCAGTGGATGTGAAGTCAGAGGTTCCTGTGGGCCTGGAGCCCATCTC
ACCTCTAGACCTAAGGACAGACCTCAGAATGATGATGCCGGTGGTGGACCCTGTCGTCCGTGAG
AAGCAGCTGCAGCAAGAGTTACTTCTTATCCAGCAGCAGCAACAAATCCAGAAGCAGCTCCTGA
TAGCGGAGTTTCAGAAACAGCACGAGAACTTGACACGGCAGCACCAGGCTCAGCTTCAGGAGCA
CATCAAGGAACTTCTAGCCATAAAACAGCAGCAAGAACTCCTAGAAAAGGAGCAGAAACTGGAG
CAGCAGAGGCAAGAACAGGAAGTAGAGAGGCATCGCAGAGAACAGCAGCTCCCTCCTCTCAGAG
GCAAAGATAGAGGACGAGAAAGGGCAGTGGCAAGTACTGAAGTAAAGCAGAAGCTTCAAGAATT
CCTGTTGAGTAAATCAGCAACGAAAGACACTCCAGCTAATGGAAAAAATCATTCCGTGAGCCGC
CATCCCAAGCTCTGGTACACGGCTGCCCACCACACATCATTGGATCAAAGCTCTCCACCCCTGA
GTGGAACATCTCCATCCTACAAATATACATTACCAGGAACTCAAGATGCCAAGGATGATTTCCC
TCTTCGAAAAACTGAATCCTCAGTGAGCAGCAGTTCTCCAGGATCTGGTCCCAGTTCACCAAAC
AATGGACCAACTGGAAATGTTACTGAAAACGAGACTTCGGTTCTGCCCCCTACTCCTCATGCTG
AGCAACTGGTTTCACAGCAACGCATTCTAATTCATGAAGATTCCATGAACCTGCTAAGTCTTTA
TACCTCTCCTTCTTTGCCCAACATTACTTTGGGACTCCCAGCAGGGTCATCCCAGCTCAACGCT
TCAAATTCTCTCAAAGAAAAGCAGAAGTGTGAGACACAGACGCTCAGGCAAGGTGTTCCTCTGC
CTGGGCAGTACGGGGGCAGCATCTCGGCATCTTCAAGCCATCCTCATGTGACTTTAGAGGGAAA
GCCCAACAGCAGCCACCAAGCTCTCCTGCAGCATTTATTATTGAAAGAACAAATGCGACAACAA
AAGCTTCTTGTGGCCGGTGGAGTTCCCTTACATCCACAGTCTCCCTTGGCAACAAAAGAGAGAA
TTTCACCAGGGATTAGAAGCACCCACAAATTGCCCCGTCATAGACCCCTGAATCGAACCCAGTC
TGCACCTCTGCCTCAGAGCACGTTGGCTCAGTTGGTCATTCAGCAGCAACACCAGCAGTTCTTG
GAGAAGCAGAAACAATACCAGCAGCAGATTCACATGAACAAACTGCTTTCGAAATCTATTGAAC
AACTGAAGCAACCGGGCAGGCACCTTGAGGAAGCCGAGGAAGAGCTTCAGGGGGACCAGGCGAT
GCAGGAAGACAGAGCGCCCTCTAGTGACAACAGCACTAGGAGCGACAGCAGTGCTTGTGTGGAT
GACACTCTGGGACAAGTGGCGGCTGTGAAGGTCAAGGAAGAACCAGTGGACAGTGACGAAGATG
CTCAGATCCAGGAAATGGAATCTGGGGAGCAGGCTGCTTTTATGCAACAGGTAATAGGCAAAGA
TTTAGCTCCAGGATTTGTAATTAAAGTCATTATCTGAACATGAAACGCACTGCAGGTTTTGGTA
AATTTCCTATTGGTTTGTATGTCTGGATGACTGATTTTAGTGTCTAAGGATTCGAACAGAAACA
GGTAAATATATATGTGTCTATACAGAGATCGATCTATGGTGATCTCTAAAAAGATAGAGAAGTT
TCATCGAAACTGCATCAATAAAAAAATACCTGTTACACTAAAATTATGCCACGTGATGTCAAAG
TAACTAATAGGCTCTAAATCCATCCCAAGATCTGTTACACCAATTACTTCTAAGCAAAATGAAC
TCACTATTATTTGTAGTTTATCTGTTGAGTTCGGTGACTGCCAGATATAGTCTCTCCCAGTCTG
ATCAATGAAGCATTCTATTAATTTTTGATTTTTTTGAACATATGGGAGTCAATTTTCGCATCAT
TGTACATAATGTATCATACTACAGTCTGGAACACTGTTAAAGGTAGTCTGCCCCTTCTTTCCTC
TCTCTTTTTTGTTAAGTAGAAGTGTTCTGGTCACTGTGCCAGTAGTCCTAGATTATTGTGTACA
TTGCAATTGAAAATAATAGGAATACAGGTGGTTTAAATATAGAGATGCAAATTGGAGTACTGTT
TTAAACTACTATGTTATGTTTCACATGACACTGTGCATTTTACTTTTATCTTGTGTAATTTGAT
GGCATTGTCTATTGAAAAAAATCAATCGATGCAGATGCACATGTTGGTGAGAAGTAATTTGCAG
AAATGTGGTCCAATCAGATACTACATAGTATCTACAATTGTAGCAAACACAGTAACAATATGAT
TATCACTTGCTATCACATCAAAATCAGTTTTAAAAGCTGTATGATATTTTATGATTATTATCAC
TAGAATATCTCAAATGTAATTCCATAATGGCATAGCATATGCCATATCATTTTAGCAAAAAAAA
AAAAGGGAAGAAAATTGGGTCTCACAAAAGATTTGACTTGTACATAATGCACCTTCAGAAAGAT
TGTGTGCTTTGATGCTATAAAATACAAACATCTTTGAAAGCAACAGAAGACAATGTTTATTTAA
GTAAGTTCTTTGTCAGGTTCCTGCTGTTCTCCTACAGAAAAGTGGTTCTGTAAGGCTGAACAGG
AAATGCCTTGTGGAAACAGGAAGTCCAAGTGATTCATGTACTGAGGAATGTAGGGAAAAAAATC
TGAGGATAGTGTTTTACTCTTTCTGTTTTTAAAGGGCACTCTATGAATTGATTTATTGTCTAAG
AAAATAACACCACAAGTAGGGAAATTGTTACGGAAGCTTTTCACTGGAACATTTCCTTCATATT
CCCTTTTGATATGTTTACCTTGTTTTATAGGTTTACTTTTGTTAAGCTAGTTAAAGGTTCGTTG
TATTAAGACCTCTTTAATATGGATAATCCAAATTGACCTAGAATCTTTGTGAGGTTTTTTCTAT
TAAAATATTTATATTTCTAAATTTGAGGTACTTTAAGGTGTAGTATCCTATTTCAGAGGAGATA
CAGCAGTTTTGCCAAATGTAGACATTGTTGAAATGTATGTTATTGGCACGTATTGTTTACATTT
TGCTGTGACATTTAAAAATATTTCTTTAAAACTGTTACTGCTAAAGATACATTATCCTTTTTTA
AAAAGCTTCCATTCAAATTAAATTAACATAACTAGAAGTTAGAAAGTTTAAAACTTTTCCATAT
AATGAACGTCCTGCTGATAATTTGACAAATAGCTATAATAGGCAACACTCCCTGTCACCAACAT
ATTTTGGTTAGTATATTTCTTCATATTAAAATGACTTTTTGTCAGTTGTTTTGCATTATAAAAA
TATGGCATGCCTAAGATAAAATTGTATATTTTTCCATCTCATAAATATTCATTTTCTTCAAAGT
CTTTTTTTCCAATCTCATAAAAAAGGGATAGTGCATCTTTTAAAATACATTTTATTTGGGGAGG
AACATGTGGCTGAGCAGACTTTTGTATAATATTACTTCAAAGATATGTAATCACAAACAAAAAA
ACTATTTTTTATAATGTCATTGAGAGAGAGTTTCATCAGTACAGTTGGTGGACATTACTTGTTT
GAATATGATAGTCTTTGAATTTAATCAGGAAACTACCTGGAACCAGTGAAAAGGAAAGCTGGAC
TTAAATAATCTTACAACTAATTGATAAATGTCTCTTTTAAAATCTACTGTATTTATTATAATTT
ACACCCTTGAAGGTGATCTCTTGTTTTGTGTTGTAAATATATTGTTTGTATGTTTCCCTTCTTG
CCTTCTGTTATAAGTCTCTTCCTTTCTCAAATAAAGTTTTTTTTAAAA

hide sequence

RefSeq Acc Id:

XM_005377351 ⟹ XP_005377408

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955410	21,402,447 - 21,607,382 (+)	NCBI

Sequence:

show sequence

GGAAGATACTGTAGTGAGAAGACAATTGTGGAAAAAGCTGAAAATAATATTAAAATAGTTAGGA
ATGAAAGACATGTTCTATGCAAATGATGGGGTGGCTGGACGGGAGCAGCTCTTGGCTCAGCAAA
GAATGCACAGTATGATCAGCTCAGTGGATGTGAAGTCAGAGGTTCCTGTGGGCCTGGAGCCCAT
CTCACCTCTAGACCTAAGGACAGACCTCAGAATGATGATGCCGGTGGTGGACCCTGTCGTCCGT
GAGAAGCAGCTGCAGCAAGAGTTACTTCTTATCCAGCAGCAGCAACAAATCCAGAAGCAGCTCC
TGATAGCGGAGTTTCAGAAACAGCACGAGAACTTGACACGGCAGCACCAGGCTCAGCTTCAGGA
GCACATCAAGGAACTTCTAGCCATAAAACAGCAGCAAGAACTCCTAGAAAAGGAGCAGAAACTG
GAGCAGCAGAGGCAAGAACAGGAAGTAGAGAGGCATCGCAGAGAACAGCAGCTCCCTCCTCTCA
GAGGCAAAGATAGAGGACGAGAAAGGGCAGTGGCAAGTACTGAAGTAAAGCAGAAGCTTCAAGA
ATTCCTGTTGAGTAAATCAGCAACGAAAGACACTCCAGCTAATGGAAAAAATCATTCCGTGAGC
CGCCATCCCAAGCTCTGGGCTGCCCACCACACATCATTGGATCAAAGCTCTCCACCCCTGAGTG
GAACATCTCCATCCTACAAATATACATTACCAGGAACTCAAGATGCCAAGGATGATTTCCCTCT
TCGAAAAACTGAATCCTCAGTGAGCAGCAGTTCTCCAGGATCTGGTCCCAGTTCACCAAACAAT
GGACCAACTGGAAATGTTACTGAAAACGAGACTTCGGTTCTGCCCCCTACTCCTCATGCTGAGC
AACTGGTTTCACAGCAACGCATTCTAATTCATGAAGATTCCATGAACCTGCTAAGTCTTTATAC
CTCTCCTTCTTTGCCCAACATTACTTTGGGACTCCCAGCAGGGTCATCCCAGCTCAACGCTTCA
AATTCTCTCAAAGAAAAGCAGAAGTGTGAGACACAGACGCTCAGGCAAGGTGTTCCTCTGCCTG
GGCAGTACGGGGGCAGCATCTCGGCATCTTCAAGCCATCCTCATGTGACTTTAGAGGGAAAGCC
CAACAGCAGCCACCAAGCTCTCCTGCAGCATTTATTATTGAAAGAACAAATGCGACAACAAAAG
CTTCTTGTGGCCGGTGGAGTTCCCTTACATCCACAGTCTCCCTTGGCAACAAAAGAGAGAATTT
CACCAGGGATTAGAAGCACCCACAAATTGCCCCGTCATAGACCCCTGAATCGAACCCAGTCTGC
ACCTCTGCCTCAGAGCACGTTGGCTCAGTTGGTCATTCAGCAGCAACACCAGCAGTTCTTGGAG
AAGCAGAAACAATACCAGCAGCAGATTCACATGAACAAACTGCTTTCGAAATCTATTGAACAAC
TGAAGCAACCGGGCAGGCACCTTGAGGAAGCCGAGGAAGAGCTTCAGGGGGACCAGGCGATGCA
GGAAGACAGAGCGCCCTCTAGTGACAACAGCACTAGGAGCGACAGCAGTGCTTGTGTGGATGAC
ACTCTGGGACAAGTGGCGGCTGTGAAGGTCAAGGAAGAACCAGTGGACAGTGACGAAGATGCTC
AGATCCAGGAAATGGAATCTGGGGAGCAGGCTGCTTTTATGCAACAGGTAATAGGCAAAGATTT
AGCTCCAGGATTTGTAATTAAAGTCATTATCTGAACATGAAACGCACTGCAGGTTTTGGTAAAT
TTCCTATTGGTTTGTATGTCTGGATGACTGATTTTAGTGTCTAAGGATTCGAACAGAAACAGGT
AAATATATATGTGTCTATACAGAGATCGATCTATGGTGATCTCTAAAAAGATAGAGAAGTTTCA
TCGAAACTGCATCAATAAAAAAATACCTGTTACACTAAAATTATGCCACGTGATGTCAAAGTAA
CTAATAGGCTCTAAATCCATCCCAAGATCTGTTACACCAATTACTTCTAAGCAAAATGAACTCA
CTATTATTTGTAGTTTATCTGTTGAGTTCGGTGACTGCCAGATATAGTCTCTCCCAGTCTGATC
AATGAAGCATTCTATTAATTTTTGATTTTTTTGAACATATGGGAGTCAATTTTCGCATCATTGT
ACATAATGTATCATACTACAGTCTGGAACACTGTTAAAGGTAGTCTGCCCCTTCTTTCCTCTCT
CTTTTTTGTTAAGTAGAAGTGTTCTGGTCACTGTGCCAGTAGTCCTAGATTATTGTGTACATTG
CAATTGAAAATAATAGGAATACAGGTGGTTTAAATATAGAGATGCAAATTGGAGTACTGTTTTA
AACTACTATGTTATGTTTCACATGACACTGTGCATTTTACTTTTATCTTGTGTAATTTGATGGC
ATTGTCTATTGAAAAAAATCAATCGATGCAGATGCACATGTTGGTGAGAAGTAATTTGCAGAAA
TGTGGTCCAATCAGATACTACATAGTATCTACAATTGTAGCAAACACAGTAACAATATGATTAT
CACTTGCTATCACATCAAAATCAGTTTTAAAAGCTGTATGATATTTTATGATTATTATCACTAG
AATATCTCAAATGTAATTCCATAATGGCATAGCATATGCCATATCATTTTAGCAAAAAAAAAAA
AGGGAAGAAAATTGGGTCTCACAAAAGATTTGACTTGTACATAATGCACCTTCAGAAAGATTGT
GTGCTTTGATGCTATAAAATACAAACATCTTTGAAAGCAACAGAAGACAATGTTTATTTAAGTA
AGTTCTTTGTCAGGTTCCTGCTGTTCTCCTACAGAAAAGTGGTTCTGTAAGGCTGAACAGGAAA
TGCCTTGTGGAAACAGGAAGTCCAAGTGATTCATGTACTGAGGAATGTAGGGAAAAAAATCTGA
GGATAGTGTTTTACTCTTTCTGTTTTTAAAGGGCACTCTATGAATTGATTTATTGTCTAAGAAA
ATAACACCACAAGTAGGGAAATTGTTACGGAAGCTTTTCACTGGAACATTTCCTTCATATTCCC
TTTTGATATGTTTACCTTGTTTTATAGGTTTACTTTTGTTAAGCTAGTTAAAGGTTCGTTGTAT
TAAGACCTCTTTAATATGGATAATCCAAATTGACCTAGAATCTTTGTGAGGTTTTTTCTATTAA
AATATTTATATTTCTAAATTTGAGGTACTTTAAGGTGTAGTATCCTATTTCAGAGGAGATACAG
CAGTTTTGCCAAATGTAGACATTGTTGAAATGTATGTTATTGGCACGTATTGTTTACATTTTGC
TGTGACATTTAAAAATATTTCTTTAAAACTGTTACTGCTAAAGATACATTATCCTTTTTTAAAA
AGCTTCCATTCAAATTAAATTAACATAACTAGAAGTTAGAAAGTTTAAAACTTTTCCATATAAT
GAACGTCCTGCTGATAATTTGACAAATAGCTATAATAGGCAACACTCCCTGTCACCAACATATT
TTGGTTAGTATATTTCTTCATATTAAAATGACTTTTTGTCAGTTGTTTTGCATTATAAAAATAT
GGCATGCCTAAGATAAAATTGTATATTTTTCCATCTCATAAATATTCATTTTCTTCAAAGTCTT
TTTTTCCAATCTCATAAAAAAGGGATAGTGCATCTTTTAAAATACATTTTATTTGGGGAGGAAC
ATGTGGCTGAGCAGACTTTTGTATAATATTACTTCAAAGATATGTAATCACAAACAAAAAAACT
ATTTTTTATAATGTCATTGAGAGAGAGTTTCATCAGTACAGTTGGTGGACATTACTTGTTTGAA
TATGATAGTCTTTGAATTTAATCAGGAAACTACCTGGAACCAGTGAAAAGGAAAGCTGGACTTA
AATAATCTTACAACTAATTGATAAATGTCTCTTTTAAAATCTACTGTATTTATTATAATTTACA
CCCTTGAAGGTGATCTCTTGTTTTGTGTTGTAAATATATTGTTTGTATGTTTCCCTTCTTGCCT
TCTGTTATAAGTCTCTTCCTTTCTCAAATAAAGTTTTTTTTAAAA

hide sequence

RefSeq Acc Id:

XM_013510571 ⟹ XP_013366025

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955410	21,402,452 - 21,932,029 (+)	NCBI

Sequence:

show sequence

ATACTGTAGTGAGAAGACAATTGTGGAAAAAGCTGAAAATAATATTAAAATAGTTAGGAATGAA
AGACATGTTCTATGCAAATGATGGGGTGGCTGGACGGGAGCAGCTCTTGGCTCAGCAAAGAATG
CACAGTATGATCAGCTCAGTGGATGTGAAGTCAGAGGTTCCTGTGGGCCTGGAGCCCATCTCAC
CTCTAGACCTAAGGACAGACCTCAGAATGATGATGCCGGTGGTGGACCCTGTCGTCCGTGAGAA
GCAGCTGCAGCAAGAGTTACTTCTTATCCAGCAGCAGCAACAAATCCAGAAGCAGCTCCTGATA
GCGGAGTTTCAGAAACAGCACGAGAACTTGACACGGCAGCACCAGGCTCAGCTTCAGGAGCACA
TCAAGTTGCAACAGGAACTTCTAGCCATAAAACAGCAGCAAGAACTCCTAGAAAAGGAGCAGAA
ACTGGAGCAGCAGAGGCAAGAACAGGAAGTAGAGAGGCATCGCAGAGAACAGCAGCTCCCTCCT
CTCAGAGGCAAAGATAGAGGACGAGAAAGGGCAGTGGCAAGTACTGAAGTAAAGCAGAAGCTTC
AAGAATTCCTGTTGAGTAAATCAGCAACGAAAGACACTCCAGCTAATGGAAAAAATCATTCCGT
GAGCCGCCATCCCAAGCTCTGGTACACGGCTGCCCACCACACATCATTGGATCAAAGCTCTCCA
CCCCTGAGTGGAACATCTCCATCCTACAAATATACATTACCAGGAACTCAAGATGCCAAGGATG
ATTTCCCTCTTCGAAAAACTGCCTCTGAGCCCAACTTGAAGGTGCGGTCCAGGTTAAAACAGAA
AGTGGCAGAGAGGAGAAGCAGCCCCTTACTCAGGCGGAAGGATGGAAATGTTGTCACTTCATTC
AAGAAGCGAATGTTTGAGGTGACAGAATCCTCAGTGAGCAGCAGTTCTCCAGGATCTGGTCCCA
GTTCACCAAACAATGGACCAACTGGAAATGTTACTGAAAACGAGACTTCGGTTCTGCCCCCTAC
TCCTCATGCTGAGCAACTGGTTTCACAGCAACGCATTCTAATTCATGAAGATTCCATGAACCTG
CTAAGTCTTTATACCTCTCCTTCTTTGCCCAACATTACTTTGGGACTCCCAGCAGGGTCATCCC
AGCTCAACGCTTCAAATTCTCTCAAAGAAAAGCAGAAGTGTGAGACACAGACGCTCAGGCAAGG
TGTTCCTCTGCCTGGGCAGTACGGGGGCAGCATCTCGGCATCTTCAAGCCATCCTCATGTGACT
TTAGAGGGAAAGCCCAACAGCAGCCACCAAGCTCTCCTGCAGCATTTATTATTGAAAGAACAAA
TGCGACAACAAAAGCTTCTTGTGGCCGGTGGAGTTCCCTTACATCCACAGTCTCCCTTGGCAAC
AAAAGAGAGAATTTCACCAGGGATTAGAAGCACCCACAAATTGCCCCGTCATAGACCCCTGAAT
CGAACCCAGTCTGCACCTCTGCCTCAGAGCACGTTGGCTCAGTTGGTCATTCAGCAGCAACACC
AGCAGTTCTTGGAGAAGCAGAAACAATACCAGCAGCAGATTCACATGAACAAACTGCTTTCGAA
ATCTATTGAACAACTGAAGCAACCGGGCAGGCACCTTGAGGAAGCCGAGGAAGAGCTTCAGGGG
GACCAGGCGATGCAGGAAGACAGAGCGCCCTCTAGTGACAACAGCACTAGGAGCGACAGCAGTG
CTTGTGTGGATGACACTCTGGGACAAGTGGCGGCTGTGAAGGTCAAGGAAGAACCAGTGGACAG
TGACGAAGATGCTCAGATCCAGGAAATGGAATCTGGGGAGCAGGCTGCTTTTATGCAACAGCAG
CCCTTCCGGGAGCCCGCGCACGCGCGTGCGCCCTCGGCGCGCCCCGCCCCGCCGGCCGCGGCGG
GCACGGACGGACTGGAGAAGCCCCGGCTGCTCTCGCGGACGCACTCCTCCCCTGCGGCCGCCAT
CTTGCCCCACCCACCGCCGGACCGCCCCCTCCAGCCGGGCTCCGCGACTGGAATTGCCTATGAC
CCTCTGATGCTGAAACACCAGTGCATCTGTGGCAATTCCACCACCCACCCCGAGCATGCTGGAC
GAATACAGAGCATCTGGTCACGGCTGCAAGAAACTGGGCTGCTAAATAAATGTGAGCGAATTCA
AGGTCGAAAAGCCAGTCTGGAGGAAATACAGCTTGTTCATTCTGAACATCACTCACTGTTGTAT
GGCACCAGCCCCCTGGATGGACAGAAGCTGGACCCCAGGATCCTCCTAGGTGATGACTCTCAAA
AGTTCTTTTCCTCATTACCATGTGGTGGACTTGGGGTGGACAGTGACACCATTTGGAATGAGCT
GCACTCGTCCGGTGCTGCACGCATGGCTGTTGGCTGTGTCATCGAACTGGCTTCCAAAGTGGCC
TCAGGAGAGCTGAAGAATGGATTTGCTGTTGTGAGGCCTCCAGGTCATCATGCTGAAGAATCCG
CAGCCATGGGGTTCTGCTTTTTTAATTCAGTTGCAATTACCGCCAAATACTTGCGAGACCAACT
AAATATAAGCAAGATATTGATTGTAGATCTGGATGTTCACCATGGAAACGGTACACAGCAGGCC
TTTTATGCTGACCCCAGCATCCTGTACATTTCACTCCATCGCTATGATGAAGGGAACTTTTTCC
CTGGCAGCGGAGCCCCAAATGAGGTTGGAACGGGCCTTGGAGAAGGATATAATATAAATATTGC
CTGGACTGGTGGCCTTGATCCCCCTATGGGAGATGTTGAGTACCTCGAAGCTTTCAGAACTGTC
GTGATGCCTGTGGCCAAAGAGTTTGATCCAAACATGGTCCTGGTTTCCGCTGGATTTGATGCAT
TAGAAGGCCACACCCCTCCTCTAGGAGGGTACAAAGTGACAGCCAAATGCTTTGGTCATTTGAC
AAAGCAGTTGATGACGTTGGTTGATGGACGTGCAGTGTTGGCTCTAGAAGGAGGACACGATCTC
ACAGCCATTTGTGATGCCTCAGAAGCTTGCGTCAATGCCCTTCTAGGAAATGAGCTGGAACCAC
TTGCTGAAGATATTCTCCACCAAACCCCGAATATGAATGCTGTGGCTTCTTTACAGAAGATTAT
TGAAATTCAAAGCAAGTACTGGAAGTCGGTCAGGATGGTGGCTGTGCCAAGGGGCTGTGCTCTT
CCTGGTGCTCAGTTGCAAGAGGAGACAGAAACTGTTTCAGCTCTGGCCTCCCTGACAGTGGACG
TGGAACAGCGCTTTGCTCAGGAAGACACCAGATTCAAAGGGTTCGATCAATGCATGGTCATCTG
GCTCCGTGGCACCAGCACTATGGCAGAGGACATGCTGGGAGAGTGTGGTGAGGCAATGCTGTGG
AACAGCGGGCAGCCAGAAAAAAGAGAGAGAACTGCTGGTGAGCCCATGGAAGAGGACCCAGCCT
TGTGAAGTGCCGAGTCTCCCCCGATATTTCCTGTGTGTGACATCATTGTGTATCCCCCCACCCC
AGCACCCTCAGACATGTCTTGTCTGCTGCCTGGGTGGTACAGATTCGATGGAACATAAACACTG
GGCACAAAATTCCGAACAGCAGCTTCACTTGTTCTTTGGAAAGACTTGAAAGGGCATTAAAGAT
TTCTGAAACGTAACCGCTGTGATTCTAAAGTTACAGTAAACCACTATTGGAAGAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005377401	(Get FASTA)	NCBI Sequence Viewer
	XP_005377402	(Get FASTA)	NCBI Sequence Viewer
	XP_005377406	(Get FASTA)	NCBI Sequence Viewer
	XP_005377407	(Get FASTA)	NCBI Sequence Viewer
	XP_005377408	(Get FASTA)	NCBI Sequence Viewer
	XP_013366025	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000011468.1
	ENSCLAP00000011469.1
	ENSCLAP00000011470
	ENSCLAP00000011470.1
	ENSCLAP00000011471.1
	ENSCLAP00000011472.1
	ENSCLAP00000011473
	ENSCLAP00000011473.1

RefSeq Acc Id:	XP_005377401 ⟸ XM_005377344
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VCP1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSPVQPDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVRE KQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQ KLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPANGKNHS VSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGTQDAKDDFPLRKTASEPNLKVRSRLKQ KVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGNVTENETSVLPP TPHAEQLVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAGSSQLNASNSLKEKQKCETQTLRQ GVPLPGQYGGSISASSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLA TKERISPGIRSTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLS KSIEQLKQPGRHLEEAEEELQGDQAMQEDRAPSSDNSTRSDSSACVDDTLGQVAAVKVKEEPVD SDEDAQIQEMESGEQAAFMQQQPFREPAHARAPSARPAPPAAAGTDGLEKPRLLSRTHSSPAAA ILPHPPPDRPLQPGSATGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERI QGRKASLEEIQLVHSEHHSLLYGTSPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNE LHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQ LNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINI AWTGGLDPPMGDVEYLEAFRTVVMPVAKEFDPNMVLVSAGFDALEGHTPPLGGYKVTAKCFGHL TKQLMTLVDGRAVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQTPNMNAVASLQKI IEIQSKYWKSVRMVAVPRGCALPGAQLQEETETVSALASLTVDVEQRFAQEDTRFKGFDQCMVI WLRGTSTMAEDMLGECGEAMLWNSGQPEKRERTAGEPMEEDPAL hide sequence

RefSeq Acc Id:	XP_005377408 ⟸ XM_005377351
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C2V7K4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKDMFYANDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVR EKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKL EQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPANGKNHSVS RHPKLWAAHHTSLDQSSPPLSGTSPSYKYTLPGTQDAKDDFPLRKTESSVSSSSPGSGPSSPNN GPTGNVTENETSVLPPTPHAEQLVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAGSSQLNAS NSLKEKQKCETQTLRQGVPLPGQYGGSISASSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQQK LLVAGGVPLHPQSPLATKERISPGIRSTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLE KQKQYQQQIHMNKLLSKSIEQLKQPGRHLEEAEEELQGDQAMQEDRAPSSDNSTRSDSSACVDD TLGQVAAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII hide sequence

RefSeq Acc Id:	XP_005377407 ⟸ XM_005377350
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C2V7K4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKDMFYANDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVR EKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKL EQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPANGKNHSVS RHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGTQDAKDDFPLRKTESSVSSSSPGSGPSSP NNGPTGNVTENETSVLPPTPHAEQLVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAGSSQLN ASNSLKEKQKCETQTLRQGVPLPGQYGGSISASSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQ QKLLVAGGVPLHPQSPLATKERISPGIRSTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQF LEKQKQYQQQIHMNKLLSKSIEQLKQPGRHLEEAEEELQGDQAMQEDRAPSSDNSTRSDSSACV DDTLGQVAAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII hide sequence

RefSeq Acc Id:	XP_005377402 ⟸ XM_005377345
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2VCP1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKDMFYANDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVR EKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKE QKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPANGKNH SVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGTQDAKDDFPLRKTASEPNLKVRSRLK QKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGNVTENETSVLP PTPHAEQLVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAGSSQLNASNSLKEKQKCETQTLR QGVPLPGQYGGSISASSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPL ATKERISPGIRSTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLL SKSIEQLKQPGRHLEEAEEELQGDQAMQEDRAPSSDNSTRSDSSACVDDTLGQVAAVKVKEEPV DSDEDAQIQEMESGEQAAFMQQQPFREPAHARAPSARPAPPAAAGTDGLEKPRLLSRTHSSPAA AILPHPPPDRPLQPGSATGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCER IQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWN ELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRD QLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNIN IAWTGGLDPPMGDVEYLEAFRTVVMPVAKEFDPNMVLVSAGFDALEGHTPPLGGYKVTAKCFGH LTKQLMTLVDGRAVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQTPNMNAVASLQK IIEIQSKYWKSVRMVAVPRGCALPGAQLQEETETVSALASLTVDVEQRFAQEDTRTAGEPMEED PAL hide sequence

RefSeq Acc Id:	XP_005377406 ⟸ XM_005377349
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C2V7K4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQKQLL IAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQLP PLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPANGKNHSVSRHPKLWYTAAHHTSLDQSS PPLSGTSPSYKYTLPGTQDAKDDFPLRKTESSVSSSSPGSGPSSPNNGPTGNVTENETSVLPPT PHAEQLVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAGSSQLNASNSLKEKQKCETQTLRQG VPLPGQYGGSISASSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLAT KERISPGIRSTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSK SIEQLKQPGRHLEEAEEELQGDQAMQEDRAPSSDNSTRSDSSACVDDTLGQVAAVKVKEEPVDS DEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII hide sequence

RefSeq Acc Id:	XP_013366025 ⟸ XM_013510571
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VCP1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKDMFYANDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVR EKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKE QKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPANGKNH SVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGTQDAKDDFPLRKTASEPNLKVRSRLK QKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGNVTENETSVLP PTPHAEQLVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAGSSQLNASNSLKEKQKCETQTLR QGVPLPGQYGGSISASSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPL ATKERISPGIRSTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLL SKSIEQLKQPGRHLEEAEEELQGDQAMQEDRAPSSDNSTRSDSSACVDDTLGQVAAVKVKEEPV DSDEDAQIQEMESGEQAAFMQQQPFREPAHARAPSARPAPPAAAGTDGLEKPRLLSRTHSSPAA AILPHPPPDRPLQPGSATGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCER IQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWN ELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRD QLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNIN IAWTGGLDPPMGDVEYLEAFRTVVMPVAKEFDPNMVLVSAGFDALEGHTPPLGGYKVTAKCFGH LTKQLMTLVDGRAVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQTPNMNAVASLQK IIEIQSKYWKSVRMVAVPRGCALPGAQLQEETETVSALASLTVDVEQRFAQEDTRFKGFDQCMV IWLRGTSTMAEDMLGECGEAMLWNSGQPEKRERTAGEPMEEDPAL hide sequence

RefSeq Acc Id:

ENSCLAP00000011473 ⟸ ENSCLAT00000011610

RefSeq Acc Id:

ENSCLAP00000011470 ⟸ ENSCLAT00000011607

RefSeq Acc Id:

ENSCLAP00000011469 ⟸ ENSCLAT00000011606

RefSeq Acc Id:

ENSCLAP00000011468 ⟸ ENSCLAT00000011605

RefSeq Acc Id:

ENSCLAP00000011472 ⟸ ENSCLAT00000011609

RefSeq Acc Id:

ENSCLAP00000011471 ⟸ ENSCLAT00000011608

Protein Domains

Histone deacetylase Histone deacetylase glutamine rich N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000007911	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000011605.1	UniProtKB/TrEMBL
	ENSCLAT00000011606.1	UniProtKB/TrEMBL
	ENSCLAT00000011607	ENTREZGENE
	ENSCLAT00000011607.1	UniProtKB/TrEMBL
	ENSCLAT00000011608.1	UniProtKB/TrEMBL
	ENSCLAT00000011609.1	UniProtKB/TrEMBL
	ENSCLAT00000011610	ENTREZGENE
	ENSCLAT00000011610.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.800.20	UniProtKB/TrEMBL
	6.10.250.1550	UniProtKB/TrEMBL
InterPro	HDAC4/5/7/9	UniProtKB/TrEMBL
	His_deacetylse	UniProtKB/TrEMBL
	His_deacetylse_dom	UniProtKB/TrEMBL
	His_deacetylse_dom_sf	UniProtKB/TrEMBL
	Hist_deacetylase_Gln_rich_N	UniProtKB/TrEMBL
	Ureohydrolase_dom_sf	UniProtKB/TrEMBL
NCBI Gene	Hdac9	ENTREZGENE
PANTHER	HISTONE DEACETYLASE 9	UniProtKB/TrEMBL
	PTHR45364	UniProtKB/TrEMBL
Pfam	HDAC4_Gln	UniProtKB/TrEMBL
	Hist_deacetyl	UniProtKB/TrEMBL
PIRSF	HDAC_II_euk	UniProtKB/TrEMBL
PRINTS	HDASUPER	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52768	UniProtKB/TrEMBL
UniProt	A0A8C2V7K0_CHILA	UniProtKB/TrEMBL
	A0A8C2V7K4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2VCP1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YNE8_CHILA	UniProtKB/TrEMBL
	A0A8C2YNE9_CHILA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations