Celf4 (CUGBP Elav-like family member 4)

Gene: Celf4 (CUGBP Elav-like family member 4) Chinchilla lanigera

Analyze

Symbol:

Celf4

Name:

CUGBP Elav-like family member 4

RGD ID:

9006438

Description:

ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); excitatory postsynaptic potential (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

CUGBP, Elav-like family member 4

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	23,617,421 - 23,898,347 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	23,607,160 - 23,898,495 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Developmental Disease (ISO)

genetic disease (ISO)

intellectual disability (ISO)

myoepithelioma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

alternative mRNA splicing, via spliceosome (ISO)

excitatory postsynaptic potential (ISO)

in utero embryonic development (ISO)

mRNA splice site recognition (ISO)

negative regulation of excitatory postsynaptic potential (ISO)

negative regulation of mRNA splicing, via spliceosome (ISO)

positive regulation of mRNA splicing, via spliceosome (ISO)

regulation of alternative mRNA splicing, via spliceosome (ISO)

regulation of retina development in camera-type eye (ISO)

Cellular Component

cytoplasm (ISO)

nucleoplasm (ISO)

nucleus (ISO)

Molecular Function

mRNA binding (ISO)

pre-mRNA binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Celf4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	23,617,421 - 23,898,347 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	23,607,160 - 23,898,495 (-)	NCBI	ChiLan1.0	ChiLan1.0

CELF4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	37,242,844 - 37,565,798 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	37,243,040 - 37,565,827 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	34,823,003 - 35,145,761 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	33,077,828 - 33,399,941 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	33,087,771 - 33,399,602	NCBI
Celera	18	31,632,904 - 31,980,932 (-)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI
HuRef	18	31,681,881 - 32,004,740 (-)	NCBI		HuRef
CHM1_1	18	34,750,014 - 34,992,394 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	37,436,109 - 37,759,418 (-)	NCBI		T2T-CHM13v2.0

Celf4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	25,610,677 - 25,887,577 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	25,610,689 - 25,887,214 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	25,477,620 - 25,754,520 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	25,477,632 - 25,754,157 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	25,636,121 - 25,912,484 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	25,622,125 - 25,897,167 (-)	NCBI		MGSCv36	mm8
Celera	18	25,963,423 - 26,269,707 (-)	NCBI		Celera
Cytogenetic Map	18	A2	NCBI
cM Map	18	13.92	NCBI

Celf4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	17,061,284 - 17,339,747 (-)	NCBI		GRCr8
mRatBN7.2	18	16,786,578 - 17,065,045 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	16,786,867 - 17,064,786 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	16,966,581 - 17,274,337 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	17,749,257 - 18,057,008 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	17,031,257 - 17,309,765 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	17,689,090 - 18,079,835 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	17,698,038 - 17,716,880 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	17,442,710 - 17,830,510 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	17,347,052 - 17,614,411 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	17,374,849 - 17,640,782 (-)	NCBI
Celera	18	16,689,194 - 16,964,152 (-)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

CELF4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	54,634,921 - 54,958,087 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	40,327,510 - 40,650,933 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	30,495,149 - 30,818,358 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	34,052,355 - 34,374,624 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	34,068,123 - 34,374,372 (-)	Ensembl	panpan1.1		panPan2

CELF4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	52,940,941 - 53,012,206 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	52,838,558 - 53,010,041 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	52,129,759 - 52,428,092 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	52,673,506 - 52,972,302 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	52,673,273 - 52,971,138 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	52,364,227 - 52,662,451 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	52,387,439 - 52,685,576 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	52,673,900 - 52,972,133 (+)	NCBI		UU_Cfam_GSD_1.0

LOC106144891
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	48,682,698 - 48,683,334 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936517	8,010,133 - 8,010,721 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CELF4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	121,066,772 - 121,381,028 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	121,065,604 - 121,381,052 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	113,836,533 - 114,193,175 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CELF4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	43,314,960 - 43,635,301 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	43,603,021 - 43,624,537 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	17,860,703 - 18,181,333 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Celf4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624779	11,452,545 - 11,731,251 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624779	11,443,993 - 11,731,208 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005372840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005372842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013510322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013510323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01000629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01000630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01000631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01000632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01000633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01265678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000012241 ⟹ ENSCLAP00000012100

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955402	23,617,421 - 23,898,347 (-)	Ensembl

RefSeq Acc Id:

XM_005372840 ⟹ XP_005372897

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955402	23,607,160 - 23,898,495 (-)	NCBI

Sequence:

show sequence

ACGAGAGGAGAGCGAGGTGTAGAGAAACCGAGGGGGAGAGAACCCGAGTGTGTGTATGCGTGTG
CGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAA
AAGGAAAGAAGATTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAA
CGCGAGCCTCAGTACCAACGGGCTCGGCGGCAGCCCGGGCAGCGCCGGGCACATGAACGGATTA
AGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCA
TTGGGCAGATCCCCCGAAACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGGAGTTCGGCAA
GATCTACGAGCTCACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCTC
ACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTCTGC
CCGGGATGAACCGGCCGATCCAGGTGAAGCCCGCGGACAGCGAGAGCCGAGGAGATAGAAAACT
CTTCGTGGGTATGCTCAATAAGCAGCAGTCCGAGGACGACGTGCGCCGTCTCTTCGAGGCCTTC
GGGAACATCGAGGAGTGCACTATCCTGCGCGGGCCGGACGGCAACAGCAAGGGATGCGCCTTCG
TGAAGTACTCCTCCCACGCCGAGGCGCAAGCCGCGATCAACGCTTTGCACGGCAGCCAGACCAT
GCCGGGAGCCTCATCCAGTCTGGTGGTCAAGTTTGCCGACACCGACAAGGAGCGCACGATGCGG
CGAATGCAGCAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCCTTCGGGGCTT
ACGGCGCCTATGCTCAGGCACTGATGCAGCAGCAAGCGGCCCTCATGGCATCAGTTGCACAGGG
AGGCTACCTGAACCCCATGGCTGCCTTCGCTGCCGCCCAGATGCAGCAGATGGCGGCCCTCAAC
ATGAACGGCCTGGCGGCTGCACCTATGACCCCAACCTCAGGTGGCAGCACCCCTCCAGGCATCA
CTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAACGGCTTCACTGGCCTCCCCCC
ACAGGCCAATGGGCAACCCGCTGCAGAAGCTGTATTTGCCAATGGCATCCACCCCTACCCAGCA
CAGAGCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAGGTC
CAGCTGCCTACCCTGCTGCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCACCGCCAATGAT
TCCCCAGCAACAGAGAGAAGGGCCCGAGGGCTGTAACCTGTTCATCTACCATCTGCCCCAGGAG
TTTGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTTTCGGTAATGTCATCTCCTCGAAAGTGT
TTGTGGATCGGGCGACTAACCAAAGTAAATGCTTTGGCTTCGTGAGCTTCGACAACCCGGCCAG
CGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGATCGGCATGAAGAGGCTCAAGGTGCAG
CTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGAGCGCCGGCGGGAGCGTCCCCCGGGGGAG
ACCAGGACTCGCACAGGGCAGGATGCTGAACGGGCTACATTAAAAAACAAACCTCTCTCTCTCT
CTATTTATAAATGAGAACTGTTGGATGACACCTTTGACATATCAGCCAATATCAATCAAGCTGA
AGACTCCAGACACTCTGTGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGTCTATGGAGTTC
AGAGGGCACGTGTTTGGGGGAAAATACACATGACATGAAGACGACGAAGAAGAAAAATGAGAAA
AAAAAAACACAAAAAAAGGCAACTTTAAAACAAAGTAACGTGAGACCAGACAGGGAGGCTGAAG
GGCTGGGCACTGGGAGGAGACGCTGCTGCTCACCGATTCCCTCGGCTTTTCCAGCCTGTGGGCG
CCTGAGGCAGGCGGGGCAAGCGTGCTGTGGGGCCTGGTCCCCTGGAGCGGCTGGGAGGCCGCCG
CTGAGCACCTCTATCTGTCATTCCTTTAGCTATTTAGGGACCAAAGGACCAAACTTTTTATTGC
AGATGTGTAGCTCTATGTCAAATAGAGGGGGAATGGAGAACTACCTCCTTCCTGCCTCCTGGCT
GTTCTTGAAACAGCTTAGAGCGATTCTATGAAAAATGTAATAAAAAAAAAAAAACTTTAAAAAA
AACACAAAAAACAAAAAAAAAAGAAAAAAAGAAAAAATAATAATGCTTCAATGCTTTTGAAACA
GCAAGATACTAGTTCTTTGATACTTTGAGAGGCGCTTTGATTACCCTCATTGAAGTCTATGACA
CTTTCCTATGGTTTTCTGTATTATATGTCTGGATGGAGCTGTTAAGATGAACAGATTGGTGGAT
CTTTGGGGAAAGCAACAAAAGTATTAAAACTCATTAACTGTGAAGTGTGAGAACACACGGAGGG
GAACAAAGGGACTTCCAAGGCAAGGTAATTGTTGTGAAAAGTCTGTAAATGCTTCTAACTCTTC
CCCCTCTTAAAATCATAATAGTTGTACAGAATTTTAAAAAGGAAAAGTTTAAAATACCTATATA
ATAGAAGAAAAATTAGAGGAAAGCAAAAAATAAAAAAAAATAAAAAAGGAAAAAAAAACTTATA
GAAGTTAGCGTTACTGCTAAAATCCCAGATGTTGTAGGACTGTACTTTTGTAGAGTTTAGACTG
AGCATCAATCCCTTCTCCTCGCGAGTGCTGTCGGACGCCGTCGTCCCCGAGGGCCAGGCCGGAC
TCTCCCAGACCTGCGGGCTCCCCTGCGCGCCACGGGACGGGAAGGGCCCCTCGCGCCCGCCGCC
GCCGCCGCCACCGCGCCTTGCTTCGCCCGCCCCGGAGCCGCGCGCTCGCTCGCTCTCCGCAAGC
CCGACACCTCCCGCTTCACTCGCCGCCTTCCATGCTTGTTCCAGAGACTTTCCGGGCAAGGGAG
AACTGGGAACTTTCATCTTAAAACAACTAGACGACACACACACACACAAACCTTAAAAAAAAAT
TTAAAAAAGAGAGAGAAAAATAAACAATCTTTGAAGAATTTCTGAAACTGTTTACAAGGAATTT
TGAAAAACAGGGATGTTTAAATGATGCCGGCTCTGTTTTTCTGTAAATAAATTTGCATATTTTG
TAGGACTTTTAATTGTAATGATAGAGAAAAAACAAGGAAAACTATTTAATGAAAGCACGATATT
TATCTTTGGTAAATGACTTTAGAGCAGTTAAAGACATTGCTTAAAAACTCAGAATCAGAAAAAC
ACTGAATTATTTAAGAACACATATATTTTAAAGTATATCATATTTATTATAATTTATTTGCACC
CTTGGGAAGACTTGCTTTGGCATTCTGCCTCAAAAACTTCTCATTGATGTCCAGTTCATCTGGA
GGCCGGAGGGACGCGCAGACCTACCATTTTTTTTTTTTCTTTTAGAAGAACAAATTTCCGGCTT
CTCTCAGGTCTCCTGTCTTTCCTTTCTGTCTATTTTGTTGTTGTTGTTTTAATTTTCTTTTTCT
TTTTCTTGGCTCCTTTTAGGATGTCCAGATGTTGTAAAAAAACAAAACAAAACGAAACAGCTGC
AGTTCAGTACAACTGCTCTTTTCACACTCAACTCCCTAAAACTCCTTGTAACCTTCTGTAACTA
TTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGTTTAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_005372842 ⟹ XP_005372899

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955402	23,607,160 - 23,898,495 (-)	NCBI

Sequence:

show sequence

ACGAGAGGAGAGCGAGGTGTAGAGAAACCGAGGGGGAGAGAACCCGAGTGTGTGTATGCGTGTG
CGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAA
AAGGAAAGAAGATTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAA
CGCGAGCCTCAGTACCAACGGGCTCGGCGGCAGCCCGGGCAGCGCCGGGCACATGAACGGATTA
AGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCA
TTGGGCAGATCCCCCGAAACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGGAGTTCGGCAA
GATCTACGAGCTCACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCTC
ACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTCTGC
CCGGGATGAACCGGCCGATCCAGGTGAAGCCCGCGGACAGCGAGAGCCGAGGAGGTAGTAGCTG
CCTGCGCCAGCCCCCTTCACAAGATAGAAAACTCTTCGTGGGTATGCTCAATAAGCAGCAGTCC
GAGGACGACGTGCGCCGTCTCTTCGAGGCCTTCGGGAACATCGAGGAGTGCACTATCCTGCGCG
GGCCGGACGGCAACAGCAAGGGATGCGCCTTCGTGAAGTACTCCTCCCACGCCGAGGCGCAAGC
CGCGATCAACGCTTTGCACGGCAGCCAGACCATGCCGGGAGCCTCATCCAGTCTGGTGGTCAAG
TTTGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAGCAGATGGCTGGCCAGATGGGCA
TGTTCAACCCCATGGCCATCCCCTTCGGGGCTTACGGCGCCTATGCTCAGGCACTGATGCAGCA
GCAAGCGGCCCTCATGGCATCAGTTGCACAGGGAGGCTACCTGAACCCCATGGCTGCCTTCGCT
GCCGCCCAGATGCAGCAGATGGCGGCCCTCAACATGAACGGCCTGGCGGCTGCACCTATGACCC
CAACCTCAGGTGGCAGCACCCCTCCAGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCC
CATTGGGGTGAACGGCTTCACTGGCCTCCCCCCACAGGCCAATGGGCAACCCGCTGCAGAAGCT
GTATTTGCCAATGGCATCCACCCCTACCCAGCACAGAGCCCCACCGCCGCGGACCCCCTGCAGC
AGGCCTACGCCGGAGTGCAGCAGTATGCAGGTCCAGCTGCCTACCCTGCTGCCTATGGTCAGAT
AAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGGGCCCGAGGGC
TGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGTTCC
TCCCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAA
CGGCTTCCAGATCGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGC
CCGTACTGAGCGCCGGCGGGAGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGCAGGATGCT
GAACGGGCTACATTAAAAAACAAACCTCTCTCTCTCTCTATTTATAAATGAGAACTGTTGGATG
ACACCTTTGACATATCAGCCAATATCAATCAAGCTGAAGACTCCAGACACTCTGTGTGACTGTA
ACATTTCTTCAAGGAAAGTATAGCGTCTATGGAGTTCAGAGGGCACGTGTTTGGGGGAAAATAC
ACATGACATGAAGACGACGAAGAAGAAAAATGAGAAAAAAAAAACACAAAAAAAGGCAACTTTA
AAACAAAGTAACGTGAGACCAGACAGGGAGGCTGAAGGGCTGGGCACTGGGAGGAGACGCTGCT
GCTCACCGATTCCCTCGGCTTTTCCAGCCTGTGGGCGCCTGAGGCAGGCGGGGCAAGCGTGCTG
TGGGGCCTGGTCCCCTGGAGCGGCTGGGAGGCCGCCGCTGAGCACCTCTATCTGTCATTCCTTT
AGCTATTTAGGGACCAAAGGACCAAACTTTTTATTGCAGATGTGTAGCTCTATGTCAAATAGAG
GGGGAATGGAGAACTACCTCCTTCCTGCCTCCTGGCTGTTCTTGAAACAGCTTAGAGCGATTCT
ATGAAAAATGTAATAAAAAAAAAAAAACTTTAAAAAAAACACAAAAAACAAAAAAAAAAGAAAA
AAAGAAAAAATAATAATGCTTCAATGCTTTTGAAACAGCAAGATACTAGTTCTTTGATACTTTG
AGAGGCGCTTTGATTACCCTCATTGAAGTCTATGACACTTTCCTATGGTTTTCTGTATTATATG
TCTGGATGGAGCTGTTAAGATGAACAGATTGGTGGATCTTTGGGGAAAGCAACAAAAGTATTAA
AACTCATTAACTGTGAAGTGTGAGAACACACGGAGGGGAACAAAGGGACTTCCAAGGCAAGGTA
ATTGTTGTGAAAAGTCTGTAAATGCTTCTAACTCTTCCCCCTCTTAAAATCATAATAGTTGTAC
AGAATTTTAAAAAGGAAAAGTTTAAAATACCTATATAATAGAAGAAAAATTAGAGGAAAGCAAA
AAATAAAAAAAAATAAAAAAGGAAAAAAAAACTTATAGAAGTTAGCGTTACTGCTAAAATCCCA
GATGTTGTAGGACTGTACTTTTGTAGAGTTTAGACTGAGCATCAATCCCTTCTCCTCGCGAGTG
CTGTCGGACGCCGTCGTCCCCGAGGGCCAGGCCGGACTCTCCCAGACCTGCGGGCTCCCCTGCG
CGCCACGGGACGGGAAGGGCCCCTCGCGCCCGCCGCCGCCGCCGCCACCGCGCCTTGCTTCGCC
CGCCCCGGAGCCGCGCGCTCGCTCGCTCTCCGCAAGCCCGACACCTCCCGCTTCACTCGCCGCC
TTCCATGCTTGTTCCAGAGACTTTCCGGGCAAGGGAGAACTGGGAACTTTCATCTTAAAACAAC
TAGACGACACACACACACACAAACCTTAAAAAAAAATTTAAAAAAGAGAGAGAAAAATAAACAA
TCTTTGAAGAATTTCTGAAACTGTTTACAAGGAATTTTGAAAAACAGGGATGTTTAAATGATGC
CGGCTCTGTTTTTCTGTAAATAAATTTGCATATTTTGTAGGACTTTTAATTGTAATGATAGAGA
AAAAACAAGGAAAACTATTTAATGAAAGCACGATATTTATCTTTGGTAAATGACTTTAGAGCAG
TTAAAGACATTGCTTAAAAACTCAGAATCAGAAAAACACTGAATTATTTAAGAACACATATATT
TTAAAGTATATCATATTTATTATAATTTATTTGCACCCTTGGGAAGACTTGCTTTGGCATTCTG
CCTCAAAAACTTCTCATTGATGTCCAGTTCATCTGGAGGCCGGAGGGACGCGCAGACCTACCAT
TTTTTTTTTTTCTTTTAGAAGAACAAATTTCCGGCTTCTCTCAGGTCTCCTGTCTTTCCTTTCT
GTCTATTTTGTTGTTGTTGTTTTAATTTTCTTTTTCTTTTTCTTGGCTCCTTTTAGGATGTCCA
GATGTTGTAAAAAAACAAAACAAAACGAAACAGCTGCAGTTCAGTACAACTGCTCTTTTCACAC
TCAACTCCCTAAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCC
CTAAATAAAGCACAGTTTAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_013510322 ⟹ XP_013365776

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955402	23,607,160 - 23,898,495 (-)	NCBI

Sequence:

show sequence

ACGAGAGGAGAGCGAGGTGTAGAGAAACCGAGGGGGAGAGAACCCGAGTGTGTGTATGCGTGTG
CGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAA
AAGGAAAGAAGATTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAA
CGCGAGCCTCAGTACCAACGGGCTCGGCGGCAGCCCGGGCAGCGCCGGGCACATGAACGGATTA
AGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCA
TTGGGCAGATCCCCCGAAACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGGAGTTCGGCAA
GATCTACGAGCTCACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCTC
ACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTCTGC
CCGGGATGAACCGGCCGATCCAGGTGAAGCCCGCGGACAGCGAGAGCCGAGGAGGTAGTAGCTG
CCTGCGCCAGCCCCCTTCACAAGATAGAAAACTCTTCGTGGGTATGCTCAATAAGCAGCAGTCC
GAGGACGACGTGCGCCGTCTCTTCGAGGCCTTCGGGAACATCGAGGAGTGCACTATCCTGCGCG
GGCCGGACGGCAACAGCAAGGGATGCGCCTTCGTGAAGTACTCCTCCCACGCCGAGGCGCAAGC
CGCGATCAACGCTTTGCACGGCAGCCAGACCATGCCGGGAGCCTCATCCAGTCTGGTGGTCAAG
TTTGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAGCAGATGGCTGGCCAGATGGGCA
TGTTCAACCCCATGGCCATCCCCTTCGGGGCTTACGGCGCCTATGCTCAGGCACTGATGCAGCA
GCAAGCGGCCCTCATGGCATCAGTTGCACAGGGAGGCTACCTGAACCCCATGGCTGCCTTCGCT
GCCGCCCAGATGCAGCAGATGGCGGCCCTCAACATGAACGGCCTGGCGGCTGCACCTATGACCC
CAACCTCAGGTGGCAGCACCCCTCCAGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCC
CATTGGGGTGAACGGCTTCACTGGCCTCCCCCCACAGGCCAATGGGCAACCCGCTGCAGAAGCT
GTATTTGCCAATGGCATCCACCCCTACCCAGCACAGAGCCCCACCGCCGCGGACCCCCTGCAGC
AGGCCTACGCCGGAGTGCAGCAGTATGCAGGTCCTGCCTACCCTGCTGCCTATGGTCAGATAAG
CCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGGCTTCGTGAGCTTC
GACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGATCGGCATGAAGA
GGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGAGCGCCGGCGGGAGC
GTCCCCCGGGGGAGACCAGGACTCGCACAGGGCAGGATGCTGAACGGGCTACATTAAAAAACAA
ACCTCTCTCTCTCTCTATTTATAAATGAGAACTGTTGGATGACACCTTTGACATATCAGCCAAT
ATCAATCAAGCTGAAGACTCCAGACACTCTGTGTGACTGTAACATTTCTTCAAGGAAAGTATAG
CGTCTATGGAGTTCAGAGGGCACGTGTTTGGGGGAAAATACACATGACATGAAGACGACGAAGA
AGAAAAATGAGAAAAAAAAAACACAAAAAAAGGCAACTTTAAAACAAAGTAACGTGAGACCAGA
CAGGGAGGCTGAAGGGCTGGGCACTGGGAGGAGACGCTGCTGCTCACCGATTCCCTCGGCTTTT
CCAGCCTGTGGGCGCCTGAGGCAGGCGGGGCAAGCGTGCTGTGGGGCCTGGTCCCCTGGAGCGG
CTGGGAGGCCGCCGCTGAGCACCTCTATCTGTCATTCCTTTAGCTATTTAGGGACCAAAGGACC
AAACTTTTTATTGCAGATGTGTAGCTCTATGTCAAATAGAGGGGGAATGGAGAACTACCTCCTT
CCTGCCTCCTGGCTGTTCTTGAAACAGCTTAGAGCGATTCTATGAAAAATGTAATAAAAAAAAA
AAAACTTTAAAAAAAACACAAAAAACAAAAAAAAAAGAAAAAAAGAAAAAATAATAATGCTTCA
ATGCTTTTGAAACAGCAAGATACTAGTTCTTTGATACTTTGAGAGGCGCTTTGATTACCCTCAT
TGAAGTCTATGACACTTTCCTATGGTTTTCTGTATTATATGTCTGGATGGAGCTGTTAAGATGA
ACAGATTGGTGGATCTTTGGGGAAAGCAACAAAAGTATTAAAACTCATTAACTGTGAAGTGTGA
GAACACACGGAGGGGAACAAAGGGACTTCCAAGGCAAGGTAATTGTTGTGAAAAGTCTGTAAAT
GCTTCTAACTCTTCCCCCTCTTAAAATCATAATAGTTGTACAGAATTTTAAAAAGGAAAAGTTT
AAAATACCTATATAATAGAAGAAAAATTAGAGGAAAGCAAAAAATAAAAAAAAATAAAAAAGGA
AAAAAAAACTTATAGAAGTTAGCGTTACTGCTAAAATCCCAGATGTTGTAGGACTGTACTTTTG
TAGAGTTTAGACTGAGCATCAATCCCTTCTCCTCGCGAGTGCTGTCGGACGCCGTCGTCCCCGA
GGGCCAGGCCGGACTCTCCCAGACCTGCGGGCTCCCCTGCGCGCCACGGGACGGGAAGGGCCCC
TCGCGCCCGCCGCCGCCGCCGCCACCGCGCCTTGCTTCGCCCGCCCCGGAGCCGCGCGCTCGCT
CGCTCTCCGCAAGCCCGACACCTCCCGCTTCACTCGCCGCCTTCCATGCTTGTTCCAGAGACTT
TCCGGGCAAGGGAGAACTGGGAACTTTCATCTTAAAACAACTAGACGACACACACACACACAAA
CCTTAAAAAAAAATTTAAAAAAGAGAGAGAAAAATAAACAATCTTTGAAGAATTTCTGAAACTG
TTTACAAGGAATTTTGAAAAACAGGGATGTTTAAATGATGCCGGCTCTGTTTTTCTGTAAATAA
ATTTGCATATTTTGTAGGACTTTTAATTGTAATGATAGAGAAAAAACAAGGAAAACTATTTAAT
GAAAGCACGATATTTATCTTTGGTAAATGACTTTAGAGCAGTTAAAGACATTGCTTAAAAACTC
AGAATCAGAAAAACACTGAATTATTTAAGAACACATATATTTTAAAGTATATCATATTTATTAT
AATTTATTTGCACCCTTGGGAAGACTTGCTTTGGCATTCTGCCTCAAAAACTTCTCATTGATGT
CCAGTTCATCTGGAGGCCGGAGGGACGCGCAGACCTACCATTTTTTTTTTTTCTTTTAGAAGAA
CAAATTTCCGGCTTCTCTCAGGTCTCCTGTCTTTCCTTTCTGTCTATTTTGTTGTTGTTGTTTT
AATTTTCTTTTTCTTTTTCTTGGCTCCTTTTAGGATGTCCAGATGTTGTAAAAAAACAAAACAA
AACGAAACAGCTGCAGTTCAGTACAACTGCTCTTTTCACACTCAACTCCCTAAAACTCCTTGTA
ACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGTTTAAAAA
AAA

hide sequence

RefSeq Acc Id:

XM_013510323 ⟹ XP_013365777

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955402	23,607,160 - 23,898,495 (-)	NCBI

Sequence:

show sequence

ACGAGAGGAGAGCGAGGTGTAGAGAAACCGAGGGGGAGAGAACCCGAGTGTGTGTATGCGTGTG
CGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAA
AAGGAAAGAAGATTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAA
CGCGAGCCTCAGTACCAACGGGCTCGGCGGCAGCCCGGGCAGCGCCGGGCACATGAACGGATTA
AGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCA
TTGGGCAGATCCCCCGAAACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGGAGTTCGGCAA
GATCTACGAGCTCACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCTC
ACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTCTGC
CCGGGATGAACCGGCCGATCCAGGTGAAGCCCGCGGACAGCGAGAGCCGAGGAGGTAGTAGCTG
CCTGCGCCAGCCCCCTTCACATAGAAAACTCTTCGTGGGTATGCTCAATAAGCAGCAGTCCGAG
GACGACGTGCGCCGTCTCTTCGAGGCCTTCGGGAACATCGAGGAGTGCACTATCCTGCGCGGGC
CGGACGGCAACAGCAAGGGATGCGCCTTCGTGAAGTACTCCTCCCACGCCGAGGCGCAAGCCGC
GATCAACGCTTTGCACGGCAGCCAGACCATGCCGGGAGCCTCATCCAGTCTGGTGGTCAAGTTT
GCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAGCAGATGGCTGGCCAGATGGGCATGT
TCAACCCCATGGCCATCCCCTTCGGGGCTTACGGCGCCTATGCTCAGGCACTGATGCAGCAGCA
AGCGGCCCTCATGGCATCAGTTGCACAGGGAGGCTACCTGAACCCCATGGCTGCCTTCGCTGCC
GCCCAGATGCAGCAGATGGCGGCCCTCAACATGAACGGCCTGGCGGCTGCACCTATGACCCCAA
CCTCAGGTGGCAGCACCCCTCCAGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCAT
TGGGGTGAACGGCTTCACTGGCCTCCCCCCACAGGCCAATGGGCAACCCGCTGCAGAAGCTGTA
TTTGCCAATGGCATCCACCCCTACCCAGCACAGAGCCCCACCGCCGCGGACCCCCTGCAGCAGG
CCTACGCCGGAGTGCAGCAGTATGCAGGTCCAGCTGCCTACCCTGCTGCCTATGGTCAGATAAG
CCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGGGCCCGAGGGCTGT
AACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGTTCCTCC
CTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGG
CTTCCAGATCGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCG
TACTGAGCGCCGGCGGGAGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGCAGGATGCTGAA
CGGGCTACATTAAAAAACAAACCTCTCTCTCTCTCTATTTATAAATGAGAACTGTTGGATGACA
CCTTTGACATATCAGCCAATATCAATCAAGCTGAAGACTCCAGACACTCTGTGTGACTGTAACA
TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTTCAGAGGGCACGTGTTTGGGGGAAAATACACA
TGACATGAAGACGACGAAGAAGAAAAATGAGAAAAAAAAAACACAAAAAAAGGCAACTTTAAAA
CAAAGTAACGTGAGACCAGACAGGGAGGCTGAAGGGCTGGGCACTGGGAGGAGACGCTGCTGCT
CACCGATTCCCTCGGCTTTTCCAGCCTGTGGGCGCCTGAGGCAGGCGGGGCAAGCGTGCTGTGG
GGCCTGGTCCCCTGGAGCGGCTGGGAGGCCGCCGCTGAGCACCTCTATCTGTCATTCCTTTAGC
TATTTAGGGACCAAAGGACCAAACTTTTTATTGCAGATGTGTAGCTCTATGTCAAATAGAGGGG
GAATGGAGAACTACCTCCTTCCTGCCTCCTGGCTGTTCTTGAAACAGCTTAGAGCGATTCTATG
AAAAATGTAATAAAAAAAAAAAAACTTTAAAAAAAACACAAAAAACAAAAAAAAAAGAAAAAAA
GAAAAAATAATAATGCTTCAATGCTTTTGAAACAGCAAGATACTAGTTCTTTGATACTTTGAGA
GGCGCTTTGATTACCCTCATTGAAGTCTATGACACTTTCCTATGGTTTTCTGTATTATATGTCT
GGATGGAGCTGTTAAGATGAACAGATTGGTGGATCTTTGGGGAAAGCAACAAAAGTATTAAAAC
TCATTAACTGTGAAGTGTGAGAACACACGGAGGGGAACAAAGGGACTTCCAAGGCAAGGTAATT
GTTGTGAAAAGTCTGTAAATGCTTCTAACTCTTCCCCCTCTTAAAATCATAATAGTTGTACAGA
ATTTTAAAAAGGAAAAGTTTAAAATACCTATATAATAGAAGAAAAATTAGAGGAAAGCAAAAAA
TAAAAAAAAATAAAAAAGGAAAAAAAAACTTATAGAAGTTAGCGTTACTGCTAAAATCCCAGAT
GTTGTAGGACTGTACTTTTGTAGAGTTTAGACTGAGCATCAATCCCTTCTCCTCGCGAGTGCTG
TCGGACGCCGTCGTCCCCGAGGGCCAGGCCGGACTCTCCCAGACCTGCGGGCTCCCCTGCGCGC
CACGGGACGGGAAGGGCCCCTCGCGCCCGCCGCCGCCGCCGCCACCGCGCCTTGCTTCGCCCGC
CCCGGAGCCGCGCGCTCGCTCGCTCTCCGCAAGCCCGACACCTCCCGCTTCACTCGCCGCCTTC
CATGCTTGTTCCAGAGACTTTCCGGGCAAGGGAGAACTGGGAACTTTCATCTTAAAACAACTAG
ACGACACACACACACACAAACCTTAAAAAAAAATTTAAAAAAGAGAGAGAAAAATAAACAATCT
TTGAAGAATTTCTGAAACTGTTTACAAGGAATTTTGAAAAACAGGGATGTTTAAATGATGCCGG
CTCTGTTTTTCTGTAAATAAATTTGCATATTTTGTAGGACTTTTAATTGTAATGATAGAGAAAA
AACAAGGAAAACTATTTAATGAAAGCACGATATTTATCTTTGGTAAATGACTTTAGAGCAGTTA
AAGACATTGCTTAAAAACTCAGAATCAGAAAAACACTGAATTATTTAAGAACACATATATTTTA
AAGTATATCATATTTATTATAATTTATTTGCACCCTTGGGAAGACTTGCTTTGGCATTCTGCCT
CAAAAACTTCTCATTGATGTCCAGTTCATCTGGAGGCCGGAGGGACGCGCAGACCTACCATTTT
TTTTTTTTCTTTTAGAAGAACAAATTTCCGGCTTCTCTCAGGTCTCCTGTCTTTCCTTTCTGTC
TATTTTGTTGTTGTTGTTTTAATTTTCTTTTTCTTTTTCTTGGCTCCTTTTAGGATGTCCAGAT
GTTGTAAAAAAACAAAACAAAACGAAACAGCTGCAGTTCAGTACAACTGCTCTTTTCACACTCA
ACTCCCTAAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTA
AATAAAGCACAGTTTAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005372897	(Get FASTA)	NCBI Sequence Viewer
	XP_005372899	(Get FASTA)	NCBI Sequence Viewer
	XP_013365776	(Get FASTA)	NCBI Sequence Viewer
	XP_013365777	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000012100
	ENSCLAP00000012100.1

RefSeq Acc Id:

XP_005372897 ⟸ XM_005372840

- Peptide Label:

isoform X4

- Sequence:

show sequence

MYIKMATLANGQADNASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRN
LDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPI
QVKPADSESRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHA
EAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQA
LMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPS
IPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA
YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATN
QSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY

hide sequence

RefSeq Acc Id:

XP_005372899 ⟸ XM_005372842

- Peptide Label:

isoform X1

- Sequence:

show sequence

MYIKMATLANGQADNASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRN
LDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPI
QVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSK
GCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAI
PFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGST
PPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQ
QYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVS
FDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY

hide sequence

RefSeq Acc Id:

XP_013365777 ⟸ XM_013510323

- Peptide Label:

isoform X3

- Sequence:

show sequence

MYIKMATLANGQADNASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRN
LDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPI
QVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKG
CAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIP
FGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTP
PGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQ
YAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSF
DNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY

hide sequence

RefSeq Acc Id:

XP_013365776 ⟸ XM_013510322

- Peptide Label:

isoform X2

- Sequence:

show sequence

MYIKMATLANGQADNASLSTNGLGGSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRN
LDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPI
QVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSK
GCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAI
PFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGST
PPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQ
QYAGPAYPAAYGQISQAFPQPPPMIPQQQREGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLK
RPKDANRPY

hide sequence

RefSeq Acc Id:

ENSCLAP00000012100 ⟸ ENSCLAT00000012241

Protein Domains

RRM

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000008344	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000012241	ENTREZGENE
	ENSCLAT00000012241.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	CELF3/4/5/6_RRM1	UniProtKB/TrEMBL
	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
NCBI Gene	Celf4	ENTREZGENE
PANTHER	CUGBP ELAV-LIKE FAMILY MEMBER 4	UniProtKB/TrEMBL
	RNA BINDING PROTEIN	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
SMART	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8C2VAL4_CHILA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-01-31	Celf4	CUGBP Elav-like family member 4		CUGBP, Elav-like family member 4	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar