Cd36 (CD36 molecule) - Rat Genome Database

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Gene: Cd36 (CD36 molecule) Chinchilla lanigera
Analyze
Symbol: Cd36
Name: CD36 molecule
RGD ID: 8847035
Description: ENCODES a protein that exhibits amyloid-beta binding (ortholog); high-density lipoprotein particle binding (ortholog); lipid binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alcoholic Fatty Liver (ortholog); allergic contact dermatitis (ortholog); FOUND IN apical part of cell (ortholog); brush border membrane (ortholog); caveola (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: CD36 molecule (thrombospondin receptor); platelet glycoprotein 4
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554105,003,668 - 5,075,313 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554105,003,720 - 5,120,903 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
Acute Lung Injury  (ISO)
Alcoholic Fatty Liver  (ISO)
allergic contact dermatitis  (ISO)
Alzheimer's disease  (ISO)
arteriosclerosis  (ISO)
atherosclerosis  (ISO)
atrial fibrillation  (ISO)
blood platelet disease  (ISO)
brain ischemia  (ISO)
Cardiac Arrhythmias  (ISO)
Cardiomegaly  (ISO)
cardiomyopathy  (ISO)
celiac disease  (ISO)
Cerebral Hemorrhage  (ISO)
cerebral infarction  (ISO)
cerebral malaria  (ISO)
chronic myeloid leukemia  (ISO)
colitis  (ISO)
corneal neovascularization  (ISO)
Coronary Disease  (ISO)
dermatomyositis  (ISO)
diabetes mellitus  (ISO)
Diabetic Nephropathies  (ISO)
dilated cardiomyopathy  (ISO)
endometriosis  (ISO)
epilepsy  (ISO)
essential thrombocythemia  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Liver Cirrhosis  (ISO)
fatty liver disease  (ISO)
glucose intolerance  (ISO)
granulomatosis with polyangiitis  (ISO)
Hematoma  (ISO)
hemolytic-uremic syndrome  (ISO)
Hypercholesterolemia  (ISO)
hypertension  (ISO)
hypertrophic cardiomyopathy  (ISO)
inclusion body myositis  (ISO)
Inflammation  (ISO)
Insulin Resistance  (ISO)
Knee Osteoarthritis  (ISO)
liver cirrhosis  (ISO)
macular degeneration  (ISO)
malaria  (ISO)
Metabolic Syndrome  (ISO)
middle cerebral artery infarction  (ISO)
Mycobacterium Infections  (ISO)
myeloid neoplasm  (ISO)
myocardial infarction  (ISO)
Myocardial Ischemia  (ISO)
nephrosis  (ISO)
non-alcoholic fatty liver disease  (ISO)
obesity  (ISO)
osteoarthritis  (ISO)
pemphigus  (ISO)
platelet-type bleeding disorder 10  (ISO)
pleomorphic xanthoastrocytoma  (ISO)
polycystic ovary syndrome  (ISO)
polycythemia vera  (ISO)
primary immunodeficiency disease  (ISO)
pulmonary fibrosis  (ISO)
pulmonary tuberculosis  (ISO)
relapsing-remitting multiple sclerosis  (ISO)
Reperfusion Injury  (ISO)
Retroperitoneal Fibrosis  (ISO)
rheumatic heart disease  (ISO)
Sepsis  (ISO)
sickle cell anemia  (ISO)
silicosis  (ISO)
Staphylococcal Infections  (ISO)
Tachycardia  (ISO)
thrombotic thrombocytopenic purpura  (ISO)
type 1 diabetes mellitus  (ISO)
type 2 diabetes mellitus  (ISO)
visual epilepsy  (ISO)
Weight Gain  (ISO)
Wounds, Penetrating  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
amyloid fibril formation  (ISO)
amyloid-beta clearance by cellular catabolic process  (ISO)
apoptotic cell clearance  (ISO)
cell surface receptor signaling pathway  (ISO)
cell-cell adhesion via plasma-membrane adhesion molecules  (ISO)
cellular response to amyloid-beta  (ISO)
cellular response to bacterial lipopeptide  (ISO)
cellular response to diacyl bacterial lipopeptide  (ISO)
cellular response to hydroperoxide  (ISO)
cellular response to insulin stimulus  (ISO)
cellular response to lipopolysaccharide  (ISO)
cellular response to lipoteichoic acid  (ISO)
cellular response to low-density lipoprotein particle stimulus  (ISO)
cellular response to oxidised low-density lipoprotein particle stimulus  (ISO)
cGMP-mediated signaling  (ISO)
cholesterol import  (ISO)
cholesterol transport  (ISO)
defense response to Gram-positive bacterium  (ISO)
digestive tract development  (ISO)
eating behavior  (ISO)
energy homeostasis  (ISO)
fatty acid metabolic process  (ISO)
fatty acid oxidation  (ISO)
fatty acid transport  (ISO)
glucose homeostasis  (ISO)
intestinal absorption  (ISO)
intestinal cholesterol absorption  (ISO)
lipid storage  (ISO)
lipid transport across blood-brain barrier  (ISO)
lipoprotein transport  (ISO)
long-chain fatty acid import across plasma membrane  (ISO)
long-chain fatty acid import into cell  (ISO)
long-chain fatty acid metabolic process  (ISO)
long-chain fatty acid transport  (ISO)
low-density lipoprotein particle clearance  (ISO)
low-density lipoprotein particle mediated signaling  (ISO)
maternal placenta development  (ISO)
negative regulation of angiogenesis  (ISO)
negative regulation of gene expression  (ISO)
negative regulation of protein import into nucleus  (ISO)
negative regulation of systemic arterial blood pressure  (ISO)
negative regulation of transcription by RNA polymerase II  (ISO)
nitric oxide mediated signal transduction  (ISO)
oxidised low-density lipoprotein particle clearance  (ISO)
phagocytosis, recognition  (ISO)
plasma lipoprotein particle clearance  (ISO)
positive regulation of blood coagulation  (ISO)
positive regulation of blood microparticle formation  (ISO)
positive regulation of cell death  (ISO)
positive regulation of cell-matrix adhesion  (ISO)
positive regulation of cholesterol storage  (ISO)
positive regulation of cold-induced thermogenesis  (ISO)
positive regulation of cytokine production  (ISO)
positive regulation of cytosolic calcium ion concentration  (ISO)
positive regulation of ERK1 and ERK2 cascade  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of glycogen biosynthetic process  (ISO)
positive regulation of I-kappaB kinase/NF-kappaB signaling  (ISO)
positive regulation of interleukin-1 beta production  (ISO)
positive regulation of interleukin-12 production  (ISO)
positive regulation of interleukin-6 production  (ISO)
positive regulation of macrophage cytokine production  (ISO)
positive regulation of macrophage derived foam cell differentiation  (ISO)
positive regulation of MAPK cascade  (ISO)
positive regulation of NF-kappaB transcription factor activity  (ISO)
positive regulation of nitric oxide biosynthetic process  (ISO)
positive regulation of NLRP3 inflammasome complex assembly  (ISO)
positive regulation of peptidyl-tyrosine phosphorylation  (ISO)
positive regulation of phagocytosis  (ISO)
positive regulation of phagocytosis, engulfment  (ISO)
positive regulation of reactive oxygen species biosynthetic process  (ISO)
positive regulation of reactive oxygen species metabolic process  (ISO)
positive regulation of triglyceride metabolic process  (ISO)
positive regulation of tumor necrosis factor production  (ISO)
receptor internalization  (ISO)
receptor-mediated endocytosis  (ISO)
regulation of action potential  (ISO)
regulation of protein-containing complex assembly  (ISO)
regulation of removal of superoxide radicals  (ISO)
regulation of toll-like receptor signaling pathway  (ISO)
response to activity  (ISO)
response to bacterium  (ISO)
response to estradiol  (ISO)
response to fatty acid  (ISO)
response to growth hormone  (ISO)
response to linoleic acid  (ISO)
response to lipid  (ISO)
response to mechanical stimulus  (ISO)
response to nutrient  (ISO)
response to stilbenoid  (ISO)
response to xenobiotic stimulus  (ISO)
sensory perception of taste  (ISO)
short-chain fatty acid transport  (ISO)
triglyceride metabolic process  (ISO)
triglyceride transport  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Cd36
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554105,003,668 - 5,075,313 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554105,003,720 - 5,120,903 (-)NCBIChiLan1.0ChiLan1.0
CD36
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl780,369,575 - 80,679,277 (+)EnsemblGRCh38hg38GRCh38
GRCh38780,602,207 - 80,679,277 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37780,231,523 - 80,308,593 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36780,069,459 - 80,144,262 (+)NCBINCBI36hg18NCBI36
Build 34779,912,607 - 79,950,974NCBI
Celera774,932,098 - 75,009,206 (+)NCBI
Cytogenetic Map7q21.11NCBI
HuRef774,834,319 - 74,911,371 (+)NCBIHuRef
CHM1_1780,162,020 - 80,239,042 (+)NCBICHM1_1
CRA_TCAGchr7v2779,562,929 - 79,640,010 (+)NCBI
Cd36
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39517,986,688 - 18,093,957 (-)NCBIGRCm39mm39
GRCm39 Ensembl517,986,688 - 18,093,799 (-)Ensembl
GRCm38517,781,690 - 17,888,959 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl517,781,690 - 17,888,801 (-)EnsemblGRCm38mm10GRCm38
MGSCv37517,287,508 - 17,394,777 (-)NCBIGRCm37mm9NCBIm37
MGSCv36517,293,840 - 17,347,520 (-)NCBImm8
Celera514,757,802 - 14,864,361 (-)NCBICelera
Cytogenetic Map5A3NCBI
cM Map58.11NCBI
Cd36
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2417,317,343 - 17,410,084 (+)NCBImRatBN7.2
Rnor_6.0414,150,309 - 14,191,498 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl414,001,761 - 14,249,749 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0414,125,297 - 14,166,434 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4413,534,582 - 13,554,416 (+)NCBIRGSC3.4rn4RGSC3.4
Celera412,880,238 - 12,941,086 (+)NCBICelera
Cytogenetic Map4q11NCBI
CD36
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1786,228,856 - 86,305,865 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl786,265,114 - 86,305,865 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0772,566,478 - 72,643,517 (+)NCBIMhudiblu_PPA_v0panPan3
CD36
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11820,299,808 - 20,375,856 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1820,339,050 - 20,372,639 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1820,015,595 - 20,045,069 (+)NCBI
ROS_Cfam_1.01820,745,564 - 20,821,666 (+)NCBI
UMICH_Zoey_3.11820,418,233 - 20,447,673 (+)NCBI
UNSW_CanFamBas_1.01819,970,682 - 20,000,166 (+)NCBI
UU_Cfam_GSD_1.01820,626,442 - 20,655,919 (+)NCBI
Cd36
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511862,188,852 - 62,269,004 (+)NCBI
SpeTri2.0NW_004936810791,823 - 838,303 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CD36
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl999,605,181 - 99,782,105 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1999,685,748 - 99,782,296 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29110,037,583 - 110,106,975 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CD36
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12168,214,875 - 68,309,336 (-)NCBI
ChlSab1.1 Ensembl2168,216,201 - 68,268,669 (-)Ensembl
Vero_WHO_p1.0NW_02366604235,654,688 - 35,734,209 (+)NCBI
Cd36
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473929,341,620 - 29,441,232 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000014607   ⟹   ENSCLAP00000014449
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554105,003,668 - 5,075,313 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000014608   ⟹   ENSCLAP00000014450
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554105,006,032 - 5,046,467 (-)Ensembl
RefSeq Acc Id: XM_005377198   ⟹   XP_005377255
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554105,003,720 - 5,036,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005377199   ⟹   XP_005377256
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554105,003,720 - 5,120,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005377200   ⟹   XP_005377257
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554105,003,720 - 5,046,369 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005377201   ⟹   XP_005377258
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554105,003,720 - 5,036,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013510592   ⟹   XP_013366046
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554105,003,720 - 5,075,313 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005377256   ⟸   XM_005377199
- Sequence:
RefSeq Acc Id: XP_005377257   ⟸   XM_005377200
- Sequence:
RefSeq Acc Id: XP_005377258   ⟸   XM_005377201
- Sequence:
RefSeq Acc Id: XP_005377255   ⟸   XM_005377198
- Sequence:
RefSeq Acc Id: XP_013366046   ⟸   XM_013510592
- Sequence:
RefSeq Acc Id: ENSCLAP00000014449   ⟸   ENSCLAT00000014607
RefSeq Acc Id: ENSCLAP00000014450   ⟸   ENSCLAT00000014608


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000009968 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000014449 ENTREZGENE
  ENSCLAP00000014450 ENTREZGENE
Ensembl Transcript ENSCLAT00000014607 ENTREZGENE
  ENSCLAT00000014608 ENTREZGENE
NCBI Gene Cd36 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Cd36  CD36 molecule    CD36 molecule (thrombospondin receptor)  Symbol and/or name change 5135510 APPROVED