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Gene: Upf1 (UPF1 RNA helicase and ATPase) Chinchilla lanigera

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Symbol:

Upf1

Name:

UPF1 RNA helicase and ATPase

RGD ID:

8856738

Description:

ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin binding (ortholog); double-stranded DNA helicase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cell cycle phase transition (ortholog); DNA repair (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disease (ortholog); dextro-looped transposition of the great arteries (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

regulator of nonsense transcripts 1; UPF1 regulator of nonsense transcripts homolog (yeast); UPF1, RNA helicase and ATPase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	2,798,336 - 2,913,176 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	2,798,336 - 2,814,063 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Developmental Disease (ISO)

dextro-looped transposition of the great arteries (ISO)

intellectual disability (ISO)

Megalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1 (ISO)

multiple types of congenital heart defects 6 (ISO)

progressive myoclonus epilepsy 8 (ISO)

right atrial isomerism (ISO)

visceral heterotaxy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

3'-UTR-mediated mRNA destabilization (ISO)

cell cycle phase transition (ISO)

DNA repair (ISO)

DNA replication (ISO)

histone mRNA catabolic process (ISO)

nuclear-transcribed mRNA catabolic process (ISO)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ISO)

positive regulation of mRNA catabolic process (ISO)

positive regulation of mRNA cis splicing, via spliceosome (ISO)

regulation of telomere maintenance (ISO)

regulation of translational termination (ISO)

telomere maintenance via semi-conservative replication (ISO)

Cellular Component

chromatin (ISO)

chromosome, telomeric region (ISO)

cytosol (ISO)

exon-exon junction complex (ISO)

nucleoplasm (ISO)

nucleus (ISO)

supraspliceosomal complex (ISO)

Molecular Function

ATP hydrolysis activity (ISO)

chromatin binding (ISO)

double-stranded DNA helicase activity (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

RNA binding (ISO)

RNA helicase activity (ISO)

telomeric DNA binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Upf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	2,798,336 - 2,913,176 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	2,798,336 - 2,814,063 (-)	NCBI	ChiLan1.0	ChiLan1.0

UPF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	18,831,959 - 18,868,230 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	18,831,959 - 18,868,230 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	18,942,768 - 18,979,039 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	18,803,744 - 18,840,039 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	18,803,787 - 18,840,038	NCBI
Celera	19	18,847,541 - 18,883,840 (+)	NCBI		Celera
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	18,507,089 - 18,543,390 (+)	NCBI		HuRef
CHM1_1	19	18,942,555 - 18,978,848 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	18,967,570 - 19,003,847 (+)	NCBI		T2T-CHM13v2.0

Upf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	70,784,143 - 70,806,418 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	70,784,175 - 70,805,928 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	70,331,493 - 70,353,423 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	70,331,525 - 70,353,278 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	72,855,421 - 72,877,172 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	73,260,514 - 73,282,268 (-)	NCBI		MGSCv36	mm8
Celera	8	72,887,999 - 72,909,735 (-)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	34.15	NCBI

Upf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	19,110,531 - 19,131,327 (+)	NCBI		GRCr8
mRatBN7.2	16	19,076,594 - 19,097,365 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	19,076,322 - 19,096,568 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	16	20,824,888 - 20,845,632 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,824,864 - 20,845,243 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,677,403 - 20,698,177 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	16	19,266,888 - 19,287,629 (+)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

UPF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	23,693,196 - 23,729,529 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	22,699,421 - 22,735,743 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	18,269,878 - 18,306,199 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	19,293,020 - 19,315,295 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	19,292,725 - 19,313,224 (+)	Ensembl	panpan1.1		panPan2

UPF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	44,234,411 - 44,271,129 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	44,236,264 - 44,270,916 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	44,149,222 - 44,185,842 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	44,720,750 - 44,757,369 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	44,720,766 - 44,757,522 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	43,958,032 - 43,994,646 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	44,368,223 - 44,404,830 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	44,643,707 - 44,680,326 (-)	NCBI		UU_Cfam_GSD_1.0

Upf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	202,920,305 - 202,956,549 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	2,468,116 - 2,505,688 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	2,469,444 - 2,505,688 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UPF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	58,975,023 - 59,013,495 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	58,975,013 - 59,013,546 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	58,558,438 - 58,561,969 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UPF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	17,291,189 - 17,328,768 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	17,291,175 - 17,330,193 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	1,996,616 - 2,034,083 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Upf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624908	1,910,315 - 1,933,655 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624908	1,909,995 - 1,935,370 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013507221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013507222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013507223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013507224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01068837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBBH01062074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01063025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000005792 ⟹ ENSCLAP00000005691

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955524	2,798,336 - 2,814,065 (-)	Ensembl

Ensembl Acc Id:

ENSCLAT00000005793 ⟹ ENSCLAP00000005692

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955524	2,799,930 - 2,913,176 (-)	Ensembl

Ensembl Acc Id:

ENSCLAT00000005794 ⟹ ENSCLAP00000005693

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955524	2,799,930 - 2,814,581 (-)	Ensembl

RefSeq Acc Id:

XM_013507221 ⟹ XP_013362675

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955524	2,798,336 - 2,814,063 (-)	NCBI

Sequence:

show sequence

CGCGCACGGCGGCGTCAGCGTCGGCGTCGGTTCCTGCCGGGGGCTGCGAGCAGCGGGCAGCTTC
GAGGGGAACCGCGGCGCTGAGGGAGTCGGCGAAGGCGGCGGCGGCGGCTCGGCGCTCGTGGCTG
TCGGCCTAGCTCGCGTCAGGCGGGCGGTTCGGTTGGAAGCGGGCGCGAGGGGGCGGCGGCGGCA
ACGCGAGGCCTGCGGCCTAGGCCTCGGCGCGGCGGCGGGCTCGAGTGCGGCGCGGAGCCGGCCG
CAGGGCCCCCAGCGGCGGCACCATGAGCGTGGAGGCCTACGGGCCCAGCTCGCAGACGCTCACC
TTCCTGGACACGGAGGAGGCGGAGCTGCTCGGCGCGGACACGCAGGGCTCCGAGTTCGAGTTCA
CCGACTTCACGCTCCCCAGCCAGACGCAGACGCCCCCCGGCGGCCCCGGCGGCCCTGGCGGGGG
CGGCGCTGGGGGCCCGGGCGGCGCGGGCGCGGGCGGCGCCGCCGGACAGCTCGACGCGCAGGTT
GGACCTGAGGGCATCCTGCAGAATGGGGCCGTGGATGACAGCGTGGCCAAGACCAGCCAGCTGC
TGGCTGAGCTAAACTTCGAGGAGGATGAAGAAGATACCTATTACACGAAGGACCTCCCCATCCA
CGCTTGCAGTTATTGCGGAATACATGATCCTGCCTGCGTGGTTTACTGTAACACCAGCAAGAAA
TGGTTCTGCAACGGCCGTGGAAATACTTCTGGCAGCCACATTGTAAATCACCTCGTGAGGGCAA
AATGCAAAGAGGTGACCCTGCACAAGGACGGGCCGCTGGGGGAGACAGTCCTGGAGTGCTACAA
CTGCGGCTGCCGCAACGTCTTCCTCCTGGGCTTCATCCCCGCCAAGGCTGACTCGGTCGTGGTT
CTGCTGTGCAGGCAGCCGTGCGCCAGTCAGAGCAGCCTCAAGGACATCAACTGGGACAGCTCGC
AGTGGCAGCCCCTGATCCAGGACCGCTGCTTCTTGTCCTGGCTGGTCAAAATCCCCTCGGAGCA
GGAGCAGCTGCGAGCACGGCAGATCACGGCTCAGCAGATCAACAAGCTAGAGGAGCTCTGGAAG
GAAAACCCTTCGGCCACCTTGGAGGACCTGGAGAAGCCAGGGGTGGACGAGGAGCCACAGCACG
TGCTACTGCGCTACGAAGATGCCTACCAGTACCAGAATATCTTTGGGCCACTGGTCAAGCTTGA
GGCCGACTACGACAAGAAGCTGAAAGAGTCTCAGACGCAAGATAACATCACGGTCAGGTGGGAC
CTGGGCCTTAACAAGAAGAGAATCGCCTACTTCACTTTGCCCAAGACTGACTCTGGTAATGAGG
ATTTAGTCATAATTTGGTTAAGAGACATGCGGCTCATGCAGGGGGACGAGATCTGCCTTCGCTA
CAAGGGCGACCTGGCACCCCTGTGGAAAGGGATTGGCCACGTCATCAAGGTCCCTGACACAAAC
TTAACCCAGCGCCCAGATTATGGTGATGAGATCGCCATCGAGCTCCGCAGCAGCGTGGGCGCGC
CCGTGGAGGTGACACACAACTTCCAGGTGGACTTCGTGTGGAAGTCGACCTCATTTGACAGGAT
GCAGAGCGCTTTGAAGACCTTCGCGGTGGACGAGACCTCTGTGTCAGGCTACATCTACCACAAG
CTGCTGGGCCACGAGGTGGAGGACGTGATCATCAAGTGCCAGCTGCCCAAGCGCTTCACTGCGC
AGGGGCTCCCCGACCTCAACCACTCACAGGTGTACGCCGTGAAGACGGTGCTGCAGAGGCCGCT
GAGCCTCATCCAGGGCCCACCTGGCACAGGGAAGACCGTGACGTCTGCCACCATCGTCTACCAC
CTGGCTCGGCAGGGCAACGGACCCGTGCTTGTGTGTGCTCCAAGCAACATCGCCGTGGACCAGC
TGACGGAGAAGATCCACCAGACGGGGCTCAAGGTTGTGCGCCTCTGTGCCAAGAGCCGCGAGGC
CATCGACTCGCCAGTGTCCTTCCTGGCCCTGCACAACCAGATCAGGAACATGGACAGCATGCCG
GAACTGCAGAAGCTGCAGCAGCTGAAGGACGAGACCGGGGAGCTGTCCTCCGCAGACGAGAAGC
GCTACCGGGCCCTCAAGCGCACGGCCGAGAGGGAGCTGCTCATGAACGCTGATGTCATCTGCTG
CACCTGCGTGGGCGCCGGCGACCCGAGGCTCGCCAAGATGCAGTTCCGCTCCATCCTGATTGAC
GAGAGCACCCAGGCCACGGAGCCCGAGTGCATGGTTCCCGTGGTCCTTGGGGCCAAGCAGCTGA
TCCTTGTGGGCGACCACTGCCAGCTGGGCCCGGTGGTGATGTGCAAGAAGGCGGCGAAGGCCGG
GCTGTCGCAGTCTCTCTTCGAGCGCCTGGTGGTGCTGGGCATCCGCCCCATCCGTCTGCAGGTC
CAGTACCGCATGCACCCTGCGCTCAGCGCCTTCCCATCCAACATCTTCTACGAGGGCTCGCTGC
AAAACGGCGTCACTGCAGCCGACCGTGTGAAGAAGGGTTTTGACTTCCAGTGGCCCCAGCCCGA
CAAGCCCATGTTCTTCTACGTGACGCAGGGCCAGGAGGAGATCGCCAGCTCGGGCACGTCCTAC
CTGAACAGGACGGAAGCTGCCAACGTGGAGAAGATCACCACAAAGCTGCTCAAGGCCGGCGCCA
AACCCGACCAGATCGGCATCATCACGCCCTACGAGGGCCAGCGCTCCTACCTGGTGCAGTACAT
GCAGTTCAGCGGCTCCCTGCACACCAAGCTATACCAGGAGGTAGAGATCGCCAGCGTGGACGCC
TTTCAGGGCCGGGAGAAGGACTTCATCATCCTGTCCTGTGTGCGGGCCAATGAGCACCAAGGAA
TCGGCTTTCTAAACGACCCCCGGCGTCTCAACGTGGCCCTGACCAGAGCTAGGTACGGCGTGAT
CATCGTGGGCAACCCAAAGGCGCTGTCGAAGCAGCCGCTGTGGAACCACCTGCTGAACTACTAC
AAGGAGCAGAAGGTGCTGGTGGAGGGGCCGCTCAACAACCTGCGCGAGAGCCTCATGCAGTTCA
GCAAGCCGCGCAAGCTGGTCAACACCATCAACCCGGGGGCCCGCTTCATGACAACAGCCATGTA
TGACGCCCGAGAGGCCATCATCCCGGGGTCCGTGTACGACCGCAGCAGCCAGGGCCGGCCGTCG
AACATGTACTTCCAGACGCACGACCAGATCGGCATGATCAGCGCGGGCCCGAGCCACGTTGCCG
CCATGAACATCCCCATCCCCTTCAACCTGGTCATGCCGCCCATGCCGCCGCCCGGCTACTTCGG
ACAGGCCAACGGGCCGGCGGCCGGCCGGGGCGCCCCGAAGAGTAAGACCGGTCGTGGGGGGCGC
CAGAAGAACCGCTTCGGGCTACCTGGGCCCAGCCAGACCACGCTCCCCAACAGCCAGGCCAGCC
AGGACGTGGCGTCGCAGCCCTTCTCGCAGGGCGCGCTGACGCAGGGCTACATCTCCATGAGCCA
GCCCTCCCAGATGAGCCAGCCCGGCCTCTCCCAGCCCGAGCTGTCCCAGGACAGTTACTTGGGT
GACGAGTTTAAATCACAGATTGACGTGGCACTGTCGCAAGACTCCACGTACCAGGGAGAGCGGG
CGTACCAGCACGGCGGGGTGACAGGGCTGTCCCAGTACTAGAAGGTGGCGGCGGAAGAGCTAAG
CTCTGTGGCTTAGTGCATCAGCATCTTATTCTGGGTAATAAAAAATAAAAATAAATGGATACCT
GTTTTCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAACAGGAGAGGGAGAGGAGCCGCCGA
GGGAGAGGAGCCGAGCACGAGCGCCCTGTGGGCGGCAGCGGCTGGCGGCGGCGGCGGCAGCGCA
CGAGGAGGAGAAGGGAGAGCAGACGGGAGGTGGCGGCCCAGGAGCCCGCCGCCCGGGAGGCCCA
GCTCGCCGCGCACCCCTGGGCCCGCGACCAGGCGGAGGGAGAAGACCCTCATCTCAGAGTAGCC
CTTTCCTCTGGTTTTTCTTTCTTTTCTCTTTTATTGAAAGGGGACTACATTTTAGCAGGAAAAA
ACTTGGCGTTTCTGTGCCCTAGCAGGCTGCTGGCGGCGGCCGTGCCAGCCGGGCCCGAGGAGCG
CAGCTCCCGGACTGCCCAGGTCCCCTGGCCTGTGTTCTAAGGGTTTCACTTAAAGAAAATATGG
TGTTTTGGGTTTTTCTGTTTGTTTTTTTAAAGATTTTTCAAAGAAGTACTGAAAAATACTTTTC
TAAGTTTGTCTCTAAGATCTTAGCGGTGGACCTGGGAGTCGTGAGCAGCTTCCAGAAACGAGGT
GTCAGTTGGCGCACCCGGAGGCCGGAGCGACGCCGGACGCAGTCTCAGGAGGATGTTTAAGGTT
TTGCTTCAGCGGCTTCGCAATGTGGGCAGCGGCCCGGCCCAGAGGCCCACGCGTGCCTCCAAGG
ACTCCGAGGAGCGTGGCCACTTCCACGCCGTGGACTCGCCGGGGCTCTGGCCGCCCCATGGAAG
GTGCTCGTGGCCCCACAGCGACCTCAGCCAGGACTGCCTGGGGCAGGAAGGCGCCATTCCGTTC
CCGGCCCGGTGGTTTTTGTCCCTTGGGGTGTGGTGGAAGGTGACAGCCAGAGGGCTGTCCCCAT
CCTGGTGGGCTCCCAGTCCCGTGCTGCCCACAGCCTGCCTGCCGGCCCAGCCTGCTGACGGTGG
GGAAGGGAGCATACCGAGGGGTGGCCGGCTCTGCCCGAGGGCCTGGAGTCAGCTCCTCCGTGGA
CAGTGCGTGGCGCTGCTCTGGGCGCAGGGCGAGAGTTGGTCGCGAGTCGGGCGGCCTCCCCTGC
CCCGCGCGCCCTGGGAGCCAGCTGACCGGACGCAGGGCCGCCTGCCTGGGGCCGGGATGCTTTC
CCATCGCAGGCTTTTGGTTCCCTTCTTCCCTAGGCCGCTAGAGGCACCCCGCCAGGCCCCCTTC
CCCGCCCGCCCTGCCTCTGCCTGTGCCCTTTGCTTTGCCCTCCACCTTCCCAGCAGTCACTCTT
GAGTTCTACCGGTCGGCAAGCATCCGTACCAAGGCAATGTAACTTGATTTTTGGTCAATATGTT
TTAAGCTCTTTTGTCACCAATAAAATCTTAATAAACA

hide sequence

RefSeq Acc Id:

XM_013507222 ⟹ XP_013362676

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955524	2,798,336 - 2,814,063 (-)	NCBI

Sequence:

show sequence

CGCGCACGGCGGCGTCAGCGTCGGCGTCGGTTCCTGCCGGGGGCTGCGAGCAGCGGGCAGCTTC
GAGGGGAACCGCGGCGCTGAGGGAGTCGGCGAAGGCGGCGGCGGCGGCTCGGCGCTCGTGGCTG
TCGGCCTAGCTCGCGTCAGGCGGGCGGTTCGGTTGGAAGCGGGCGCGAGGGGGCGGCGGCGGCA
ACGCGAGGCCTGCGGCCTAGGCCTCGGCGCGGCGGCGGGCTCGAGTGCGGCGCGGAGCCGGCCG
CAGGGCCCCCAGCGGCGGCACCATGAGCGTGGAGGCCTACGGGCCCAGCTCGCAGACGCTCACC
TTCCTGGACACGGAGGAGGCGGAGCTGCTCGGCGCGGACACGCAGGGCTCCGAGTTCGAGTTCA
CCGACTTCACGCTCCCCAGCCAGACGCAGACGCCCCCCGGCGGCCCCGGCGGCCCTGGCGGGGG
CGGCGCTGGGGGCCCGGGCGGCGCGGGCGCGGGCGGCGCCGCCGGACAGCTCGACGCGCAGGTT
GGACCTGAGGGCATCCTGCAGAATGGGGCCGTGGATGACAGCGTGGCCAAGACCAGCCAGCTGC
TGGCTGAGCTAAACTTCGAGGAGGATGAAGAAGATACCTATTACACGAAGGACCTCCCCATCCA
CGCTTGCAGTTATTGCGGAATACATGATCCTGCCTGCGTGGTTTACTGTAACACCAGCAAGAAA
TGGTTCTGCAACGGCCGTGGAAATACTTCTGGCAGCCACATTGTAAATCACCTCGTGAGGGCAA
AATGCAAAGAGGTGACCCTGCACAAGGACGGGCCGCTGGGGGAGACAGTCCTGGAGTGCTACAA
CTGCGGCTGCCGCAACGTCTTCCTCCTGGGCTTCATCCCCGCCAAGGCTGACTCGGTCGTGGTT
CTGCTGTGCAGGCAGCCGTGCGCCAGTCAGAGCAGCCTCAAGGACATCAACTGGGACAGCTCGC
AGTGGCAGCCCCTGATCCAGGACCGCTGCTTCTTGTCCTGGCTGGTCAAAATCCCCTCGGAGCA
GGAGCAGCTGCGAGCACGGCAGATCACGGCTCAGCAGATCAACAAGCTAGAGGAGCTCTGGAAG
GAAAACCCTTCGGCCACCTTGGAGGACCTGGAGAAGCCAGGGGTGGACGAGGAGCCACAGCACG
TGCTACTGCGCTACGAAGATGCCTACCAGTACCAGAATATCTTTGGGCCACTGGTCAAGCTTGA
GGCCGACTACGACAAGAAGCTGAAAGAGTCTCAGACGCAAGATAACATCACGGTCAGGTGGGAC
CTGGGCCTTAACAAGAAGAGAATCGCCTACTTCACTTTGCCCAAGACTGACTCTGGTAATGAGG
ATTTAGTCATAATTTGGTTAAGAGACATGCGGCTCATGCAGGGGGACGAGATCTGCCTTCGCTA
CAAGGGCGACCTGGCACCCCTGTGGAAAGGGATTGGCCACGTCATCAAGGTCCCTGACAATTAT
GGTGATGAGATCGCCATCGAGCTCCGCAGCAGCGTGGGCGCGCCCGTGGAGGTGACACACAACT
TCCAGGTGGACTTCGTGTGGAAGTCGACCTCATTTGACAGGATGCAGAGCGCTTTGAAGACCTT
CGCGGTGGACGAGACCTCTGTGTCAGGCTACATCTACCACAAGCTGCTGGGCCACGAGGTGGAG
GACGTGATCATCAAGTGCCAGCTGCCCAAGCGCTTCACTGCGCAGGGGCTCCCCGACCTCAACC
ACTCACAGGTGTACGCCGTGAAGACGGTGCTGCAGAGGCCGCTGAGCCTCATCCAGGGCCCACC
TGGCACAGGGAAGACCGTGACGTCTGCCACCATCGTCTACCACCTGGCTCGGCAGGGCAACGGA
CCCGTGCTTGTGTGTGCTCCAAGCAACATCGCCGTGGACCAGCTGACGGAGAAGATCCACCAGA
CGGGGCTCAAGGTTGTGCGCCTCTGTGCCAAGAGCCGCGAGGCCATCGACTCGCCAGTGTCCTT
CCTGGCCCTGCACAACCAGATCAGGAACATGGACAGCATGCCGGAACTGCAGAAGCTGCAGCAG
CTGAAGGACGAGACCGGGGAGCTGTCCTCCGCAGACGAGAAGCGCTACCGGGCCCTCAAGCGCA
CGGCCGAGAGGGAGCTGCTCATGAACGCTGATGTCATCTGCTGCACCTGCGTGGGCGCCGGCGA
CCCGAGGCTCGCCAAGATGCAGTTCCGCTCCATCCTGATTGACGAGAGCACCCAGGCCACGGAG
CCCGAGTGCATGGTTCCCGTGGTCCTTGGGGCCAAGCAGCTGATCCTTGTGGGCGACCACTGCC
AGCTGGGCCCGGTGGTGATGTGCAAGAAGGCGGCGAAGGCCGGGCTGTCGCAGTCTCTCTTCGA
GCGCCTGGTGGTGCTGGGCATCCGCCCCATCCGTCTGCAGGTCCAGTACCGCATGCACCCTGCG
CTCAGCGCCTTCCCATCCAACATCTTCTACGAGGGCTCGCTGCAAAACGGCGTCACTGCAGCCG
ACCGTGTGAAGAAGGGTTTTGACTTCCAGTGGCCCCAGCCCGACAAGCCCATGTTCTTCTACGT
GACGCAGGGCCAGGAGGAGATCGCCAGCTCGGGCACGTCCTACCTGAACAGGACGGAAGCTGCC
AACGTGGAGAAGATCACCACAAAGCTGCTCAAGGCCGGCGCCAAACCCGACCAGATCGGCATCA
TCACGCCCTACGAGGGCCAGCGCTCCTACCTGGTGCAGTACATGCAGTTCAGCGGCTCCCTGCA
CACCAAGCTATACCAGGAGGTAGAGATCGCCAGCGTGGACGCCTTTCAGGGCCGGGAGAAGGAC
TTCATCATCCTGTCCTGTGTGCGGGCCAATGAGCACCAAGGAATCGGCTTTCTAAACGACCCCC
GGCGTCTCAACGTGGCCCTGACCAGAGCTAGGTACGGCGTGATCATCGTGGGCAACCCAAAGGC
GCTGTCGAAGCAGCCGCTGTGGAACCACCTGCTGAACTACTACAAGGAGCAGAAGGTGCTGGTG
GAGGGGCCGCTCAACAACCTGCGCGAGAGCCTCATGCAGTTCAGCAAGCCGCGCAAGCTGGTCA
ACACCATCAACCCGGGGGCCCGCTTCATGACAACAGCCATGTATGACGCCCGAGAGGCCATCAT
CCCGGGGTCCGTGTACGACCGCAGCAGCCAGGGCCGGCCGTCGAACATGTACTTCCAGACGCAC
GACCAGATCGGCATGATCAGCGCGGGCCCGAGCCACGTTGCCGCCATGAACATCCCCATCCCCT
TCAACCTGGTCATGCCGCCCATGCCGCCGCCCGGCTACTTCGGACAGGCCAACGGGCCGGCGGC
CGGCCGGGGCGCCCCGAAGAGTAAGACCGGTCGTGGGGGGCGCCAGAAGAACCGCTTCGGGCTA
CCTGGGCCCAGCCAGACCACGCTCCCCAACAGCCAGGCCAGCCAGGACGTGGCGTCGCAGCCCT
TCTCGCAGGGCGCGCTGACGCAGGGCTACATCTCCATGAGCCAGCCCTCCCAGATGAGCCAGCC
CGGCCTCTCCCAGCCCGAGCTGTCCCAGGACAGTTACTTGGGTGACGAGTTTAAATCACAGATT
GACGTGGCACTGTCGCAAGACTCCACGTACCAGGGAGAGCGGGCGTACCAGCACGGCGGGGTGA
CAGGGCTGTCCCAGTACTAGAAGGTGGCGGCGGAAGAGCTAAGCTCTGTGGCTTAGTGCATCAG
CATCTTATTCTGGGTAATAAAAAATAAAAATAAATGGATACCTGTTTTCCACTGCTAAAACTGA
AGCACCACTGTGTGAGCAACAGGAGAGGGAGAGGAGCCGCCGAGGGAGAGGAGCCGAGCACGAG
CGCCCTGTGGGCGGCAGCGGCTGGCGGCGGCGGCGGCAGCGCACGAGGAGGAGAAGGGAGAGCA
GACGGGAGGTGGCGGCCCAGGAGCCCGCCGCCCGGGAGGCCCAGCTCGCCGCGCACCCCTGGGC
CCGCGACCAGGCGGAGGGAGAAGACCCTCATCTCAGAGTAGCCCTTTCCTCTGGTTTTTCTTTC
TTTTCTCTTTTATTGAAAGGGGACTACATTTTAGCAGGAAAAAACTTGGCGTTTCTGTGCCCTA
GCAGGCTGCTGGCGGCGGCCGTGCCAGCCGGGCCCGAGGAGCGCAGCTCCCGGACTGCCCAGGT
CCCCTGGCCTGTGTTCTAAGGGTTTCACTTAAAGAAAATATGGTGTTTTGGGTTTTTCTGTTTG
TTTTTTTAAAGATTTTTCAAAGAAGTACTGAAAAATACTTTTCTAAGTTTGTCTCTAAGATCTT
AGCGGTGGACCTGGGAGTCGTGAGCAGCTTCCAGAAACGAGGTGTCAGTTGGCGCACCCGGAGG
CCGGAGCGACGCCGGACGCAGTCTCAGGAGGATGTTTAAGGTTTTGCTTCAGCGGCTTCGCAAT
GTGGGCAGCGGCCCGGCCCAGAGGCCCACGCGTGCCTCCAAGGACTCCGAGGAGCGTGGCCACT
TCCACGCCGTGGACTCGCCGGGGCTCTGGCCGCCCCATGGAAGGTGCTCGTGGCCCCACAGCGA
CCTCAGCCAGGACTGCCTGGGGCAGGAAGGCGCCATTCCGTTCCCGGCCCGGTGGTTTTTGTCC
CTTGGGGTGTGGTGGAAGGTGACAGCCAGAGGGCTGTCCCCATCCTGGTGGGCTCCCAGTCCCG
TGCTGCCCACAGCCTGCCTGCCGGCCCAGCCTGCTGACGGTGGGGAAGGGAGCATACCGAGGGG
TGGCCGGCTCTGCCCGAGGGCCTGGAGTCAGCTCCTCCGTGGACAGTGCGTGGCGCTGCTCTGG
GCGCAGGGCGAGAGTTGGTCGCGAGTCGGGCGGCCTCCCCTGCCCCGCGCGCCCTGGGAGCCAG
CTGACCGGACGCAGGGCCGCCTGCCTGGGGCCGGGATGCTTTCCCATCGCAGGCTTTTGGTTCC
CTTCTTCCCTAGGCCGCTAGAGGCACCCCGCCAGGCCCCCTTCCCCGCCCGCCCTGCCTCTGCC
TGTGCCCTTTGCTTTGCCCTCCACCTTCCCAGCAGTCACTCTTGAGTTCTACCGGTCGGCAAGC
ATCCGTACCAAGGCAATGTAACTTGATTTTTGGTCAATATGTTTTAAGCTCTTTTGTCACCAAT
AAAATCTTAATAAACA

hide sequence

RefSeq Acc Id:

XM_013507223 ⟹ XP_013362677

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955524	2,798,336 - 2,814,063 (-)	NCBI

Sequence:

show sequence

CGCGCACGGCGGCGTCAGCGTCGGCGTCGGTTCCTGCCGGGGGCTGCGAGCAGCGGGCAGCTTC
GAGGGGAACCGCGGCGCTGAGGGAGTCGGCGAAGGCGGCGGCGGCGGCTCGGCGCTCGTGGCTG
TCGGCCTAGCTCGCGTCAGGCGGGCGGTTCGGTTGGAAGCGGGCGCGAGGGGGCGGCGGCGGCA
ACGCGAGGCCTGCGGCCTAGGCCTCGGCGCGGCGGCGGGCTCGAGTGCGGCGCGGAGCCGGCCG
CAGGGCCCCCAGCGGCGGCACCATGAGCGTGGAGGCCTACGGGCCCAGCTCGCAGACGCTCACC
TTCCTGGACACGGAGGAGGCGGAGCTGCTCGGCGCGGACACGCAGGGCTCCGAGTTCGAGTTCA
CCGACTTCACGCTCCCCAGCCAGACGCAGACGCCCCCCGGCGGCCCCGGCGGCCCTGGCGGGGG
CGGCGCTGGGGGCCCGGGCGGCGCGGGCGCGGGCGGCGCCGCCGGACAGCTCGACGCGCAGGTT
GGACCTGAGGGCATCCTGCAGAATGGGGCCGTGGATGACAGCGTGGCCAAGACCAGCCAGCTGC
TGGCTGAGCTAAACTTCGAGGAGGATGAAGAAGATACCTATTACACGAAGGACCTCCCCATCCA
CGCTTGCAGTTATTGCGGAATACATGATCCTGCCTGCGTGGTTTACTGTAACACCAGCAAGAAA
TGGTTCTGCAACGGCCGTGGAAATACTTCTGGCAGCCACATTGTAAATCACCTCGTGAGGGCAA
AATGCAAAGAGGTGACCCTGCACAAGGACGGGCCGCTGGGGGAGACAGTCCTGGAGTGCTACAA
CTGCGGCTGCCGCAACGTCTTCCTCCTGGGCTTCATCCCCGCCAAGGCTGACTCGGTCGTGGTT
CTGCTGTGCAGGCAGCCGTGCGCCAGTCAGAGCAGCCTCAAGGACATCAACTGGGACAGCTCGC
AGTGGCAGCCCCTGATCCAGGACCGCTGCTTCTTGTCCTGGCTGGTCAAAATCCCCTCGGAGCA
GGAGCAGCTGCGAGCACGGCAGATCACGGCTCAGCAGATCAACAAGCTAGAGGAGCTCTGGAAG
GAAAACCCTTCGGCCACCTTGGAGGACCTGGAGAAGCCAGGGGTGGACGAGGAGCCACAGCACG
TGCTACTGCGCTACGAAGATGCCTACCAGTACCAGAATATCTTTGGGCCACTGGTCAAGCTTGA
GGCCGACTACGACAAGAAGCTGAAAGAGTCTCAGACGCAAGATAACATCACGGTCAGGTGGGAC
CTGGGCCTTAACAAGAAGAGAATCGCCTACTTCACTTTGCCCAAGACTGACTCTGACATGCGGC
TCATGCAGGGGGACGAGATCTGCCTTCGCTACAAGGGCGACCTGGCACCCCTGTGGAAAGGGAT
TGGCCACGTCATCAAGGTCCCTGACACAAACTTAACCCAGCGCCCAGATTATGGTGATGAGATC
GCCATCGAGCTCCGCAGCAGCGTGGGCGCGCCCGTGGAGGTGACACACAACTTCCAGGTGGACT
TCGTGTGGAAGTCGACCTCATTTGACAGGATGCAGAGCGCTTTGAAGACCTTCGCGGTGGACGA
GACCTCTGTGTCAGGCTACATCTACCACAAGCTGCTGGGCCACGAGGTGGAGGACGTGATCATC
AAGTGCCAGCTGCCCAAGCGCTTCACTGCGCAGGGGCTCCCCGACCTCAACCACTCACAGGTGT
ACGCCGTGAAGACGGTGCTGCAGAGGCCGCTGAGCCTCATCCAGGGCCCACCTGGCACAGGGAA
GACCGTGACGTCTGCCACCATCGTCTACCACCTGGCTCGGCAGGGCAACGGACCCGTGCTTGTG
TGTGCTCCAAGCAACATCGCCGTGGACCAGCTGACGGAGAAGATCCACCAGACGGGGCTCAAGG
TTGTGCGCCTCTGTGCCAAGAGCCGCGAGGCCATCGACTCGCCAGTGTCCTTCCTGGCCCTGCA
CAACCAGATCAGGAACATGGACAGCATGCCGGAACTGCAGAAGCTGCAGCAGCTGAAGGACGAG
ACCGGGGAGCTGTCCTCCGCAGACGAGAAGCGCTACCGGGCCCTCAAGCGCACGGCCGAGAGGG
AGCTGCTCATGAACGCTGATGTCATCTGCTGCACCTGCGTGGGCGCCGGCGACCCGAGGCTCGC
CAAGATGCAGTTCCGCTCCATCCTGATTGACGAGAGCACCCAGGCCACGGAGCCCGAGTGCATG
GTTCCCGTGGTCCTTGGGGCCAAGCAGCTGATCCTTGTGGGCGACCACTGCCAGCTGGGCCCGG
TGGTGATGTGCAAGAAGGCGGCGAAGGCCGGGCTGTCGCAGTCTCTCTTCGAGCGCCTGGTGGT
GCTGGGCATCCGCCCCATCCGTCTGCAGGTCCAGTACCGCATGCACCCTGCGCTCAGCGCCTTC
CCATCCAACATCTTCTACGAGGGCTCGCTGCAAAACGGCGTCACTGCAGCCGACCGTGTGAAGA
AGGGTTTTGACTTCCAGTGGCCCCAGCCCGACAAGCCCATGTTCTTCTACGTGACGCAGGGCCA
GGAGGAGATCGCCAGCTCGGGCACGTCCTACCTGAACAGGACGGAAGCTGCCAACGTGGAGAAG
ATCACCACAAAGCTGCTCAAGGCCGGCGCCAAACCCGACCAGATCGGCATCATCACGCCCTACG
AGGGCCAGCGCTCCTACCTGGTGCAGTACATGCAGTTCAGCGGCTCCCTGCACACCAAGCTATA
CCAGGAGGTAGAGATCGCCAGCGTGGACGCCTTTCAGGGCCGGGAGAAGGACTTCATCATCCTG
TCCTGTGTGCGGGCCAATGAGCACCAAGGAATCGGCTTTCTAAACGACCCCCGGCGTCTCAACG
TGGCCCTGACCAGAGCTAGGTACGGCGTGATCATCGTGGGCAACCCAAAGGCGCTGTCGAAGCA
GCCGCTGTGGAACCACCTGCTGAACTACTACAAGGAGCAGAAGGTGCTGGTGGAGGGGCCGCTC
AACAACCTGCGCGAGAGCCTCATGCAGTTCAGCAAGCCGCGCAAGCTGGTCAACACCATCAACC
CGGGGGCCCGCTTCATGACAACAGCCATGTATGACGCCCGAGAGGCCATCATCCCGGGGTCCGT
GTACGACCGCAGCAGCCAGGGCCGGCCGTCGAACATGTACTTCCAGACGCACGACCAGATCGGC
ATGATCAGCGCGGGCCCGAGCCACGTTGCCGCCATGAACATCCCCATCCCCTTCAACCTGGTCA
TGCCGCCCATGCCGCCGCCCGGCTACTTCGGACAGGCCAACGGGCCGGCGGCCGGCCGGGGCGC
CCCGAAGAGTAAGACCGGTCGTGGGGGGCGCCAGAAGAACCGCTTCGGGCTACCTGGGCCCAGC
CAGACCACGCTCCCCAACAGCCAGGCCAGCCAGGACGTGGCGTCGCAGCCCTTCTCGCAGGGCG
CGCTGACGCAGGGCTACATCTCCATGAGCCAGCCCTCCCAGATGAGCCAGCCCGGCCTCTCCCA
GCCCGAGCTGTCCCAGGACAGTTACTTGGGTGACGAGTTTAAATCACAGATTGACGTGGCACTG
TCGCAAGACTCCACGTACCAGGGAGAGCGGGCGTACCAGCACGGCGGGGTGACAGGGCTGTCCC
AGTACTAGAAGGTGGCGGCGGAAGAGCTAAGCTCTGTGGCTTAGTGCATCAGCATCTTATTCTG
GGTAATAAAAAATAAAAATAAATGGATACCTGTTTTCCACTGCTAAAACTGAAGCACCACTGTG
TGAGCAACAGGAGAGGGAGAGGAGCCGCCGAGGGAGAGGAGCCGAGCACGAGCGCCCTGTGGGC
GGCAGCGGCTGGCGGCGGCGGCGGCAGCGCACGAGGAGGAGAAGGGAGAGCAGACGGGAGGTGG
CGGCCCAGGAGCCCGCCGCCCGGGAGGCCCAGCTCGCCGCGCACCCCTGGGCCCGCGACCAGGC
GGAGGGAGAAGACCCTCATCTCAGAGTAGCCCTTTCCTCTGGTTTTTCTTTCTTTTCTCTTTTA
TTGAAAGGGGACTACATTTTAGCAGGAAAAAACTTGGCGTTTCTGTGCCCTAGCAGGCTGCTGG
CGGCGGCCGTGCCAGCCGGGCCCGAGGAGCGCAGCTCCCGGACTGCCCAGGTCCCCTGGCCTGT
GTTCTAAGGGTTTCACTTAAAGAAAATATGGTGTTTTGGGTTTTTCTGTTTGTTTTTTTAAAGA
TTTTTCAAAGAAGTACTGAAAAATACTTTTCTAAGTTTGTCTCTAAGATCTTAGCGGTGGACCT
GGGAGTCGTGAGCAGCTTCCAGAAACGAGGTGTCAGTTGGCGCACCCGGAGGCCGGAGCGACGC
CGGACGCAGTCTCAGGAGGATGTTTAAGGTTTTGCTTCAGCGGCTTCGCAATGTGGGCAGCGGC
CCGGCCCAGAGGCCCACGCGTGCCTCCAAGGACTCCGAGGAGCGTGGCCACTTCCACGCCGTGG
ACTCGCCGGGGCTCTGGCCGCCCCATGGAAGGTGCTCGTGGCCCCACAGCGACCTCAGCCAGGA
CTGCCTGGGGCAGGAAGGCGCCATTCCGTTCCCGGCCCGGTGGTTTTTGTCCCTTGGGGTGTGG
TGGAAGGTGACAGCCAGAGGGCTGTCCCCATCCTGGTGGGCTCCCAGTCCCGTGCTGCCCACAG
CCTGCCTGCCGGCCCAGCCTGCTGACGGTGGGGAAGGGAGCATACCGAGGGGTGGCCGGCTCTG
CCCGAGGGCCTGGAGTCAGCTCCTCCGTGGACAGTGCGTGGCGCTGCTCTGGGCGCAGGGCGAG
AGTTGGTCGCGAGTCGGGCGGCCTCCCCTGCCCCGCGCGCCCTGGGAGCCAGCTGACCGGACGC
AGGGCCGCCTGCCTGGGGCCGGGATGCTTTCCCATCGCAGGCTTTTGGTTCCCTTCTTCCCTAG
GCCGCTAGAGGCACCCCGCCAGGCCCCCTTCCCCGCCCGCCCTGCCTCTGCCTGTGCCCTTTGC
TTTGCCCTCCACCTTCCCAGCAGTCACTCTTGAGTTCTACCGGTCGGCAAGCATCCGTACCAAG
GCAATGTAACTTGATTTTTGGTCAATATGTTTTAAGCTCTTTTGTCACCAATAAAATCTTAATA
AACA

hide sequence

RefSeq Acc Id:

XM_013507224 ⟹ XP_013362678

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955524	2,798,336 - 2,814,063 (-)	NCBI

Sequence:

show sequence

CGCGCACGGCGGCGTCAGCGTCGGCGTCGGTTCCTGCCGGGGGCTGCGAGCAGCGGGCAGCTTC
GAGGGGAACCGCGGCGCTGAGGGAGTCGGCGAAGGCGGCGGCGGCGGCTCGGCGCTCGTGGCTG
TCGGCCTAGCTCGCGTCAGGCGGGCGGTTCGGTTGGAAGCGGGCGCGAGGGGGCGGCGGCGGCA
ACGCGAGGCCTGCGGCCTAGGCCTCGGCGCGGCGGCGGGCTCGAGTGCGGCGCGGAGCCGGCCG
CAGGGCCCCCAGCGGCGGCACCATGAGCGTGGAGGCCTACGGGCCCAGCTCGCAGACGCTCACC
TTCCTGGACACGGAGGAGGCGGAGCTGCTCGGCGCGGACACGCAGGGCTCCGAGTTCGAGTTCA
CCGACTTCACGCTCCCCAGCCAGACGCAGACGCCCCCCGGCGGCCCCGGCGGCCCTGGCGGGGG
CGGCGCTGGGGGCCCGGGCGGCGCGGGCGCGGGCGGCGCCGCCGGACAGCTCGACGCGCAGGTT
GGACCTGAGGGCATCCTGCAGAATGGGGCCGTGGATGACAGCGTGGCCAAGACCAGCCAGCTGC
TGGCTGAGCTAAACTTCGAGGAGGATGAAGAAGATACCTATTACACGAAGGACCTCCCCATCCA
CGCTTGCAGTTATTGCGGAATACATGATCCTGCCTGCGTGGTTTACTGTAACACCAGCAAGAAA
TGGTTCTGCAACGGCCGTGGAAATACTTCTGGCAGCCACATTGTAAATCACCTCGTGAGGGCAA
AATGCAAAGAGGTGACCCTGCACAAGGACGGGCCGCTGGGGGAGACAGTCCTGGAGTGCTACAA
CTGCGGCTGCCGCAACGTCTTCCTCCTGGGCTTCATCCCCGCCAAGGCTGACTCGGTCGTGGTT
CTGCTGTGCAGGCAGCCGTGCGCCAGTCAGAGCAGCCTCAAGGACATCAACTGGGACAGCTCGC
AGTGGCAGCCCCTGATCCAGGACCGCTGCTTCTTGTCCTGGCTGGTCAAAATCCCCTCGGAGCA
GGAGCAGCTGCGAGCACGGCAGATCACGGCTCAGCAGATCAACAAGCTAGAGGAGCTCTGGAAG
GAAAACCCTTCGGCCACCTTGGAGGACCTGGAGAAGCCAGGGGTGGACGAGGAGCCACAGCACG
TGCTACTGCGCTACGAAGATGCCTACCAGTACCAGAATATCTTTGGGCCACTGGTCAAGCTTGA
GGCCGACTACGACAAGAAGCTGAAAGAGTCTCAGACGCAAGATAACATCACGGTCAGGTGGGAC
CTGGGCCTTAACAAGAAGAGAATCGCCTACTTCACTTTGCCCAAGACTGACTCTGACATGCGGC
TCATGCAGGGGGACGAGATCTGCCTTCGCTACAAGGGCGACCTGGCACCCCTGTGGAAAGGGAT
TGGCCACGTCATCAAGGTCCCTGACAATTATGGTGATGAGATCGCCATCGAGCTCCGCAGCAGC
GTGGGCGCGCCCGTGGAGGTGACACACAACTTCCAGGTGGACTTCGTGTGGAAGTCGACCTCAT
TTGACAGGATGCAGAGCGCTTTGAAGACCTTCGCGGTGGACGAGACCTCTGTGTCAGGCTACAT
CTACCACAAGCTGCTGGGCCACGAGGTGGAGGACGTGATCATCAAGTGCCAGCTGCCCAAGCGC
TTCACTGCGCAGGGGCTCCCCGACCTCAACCACTCACAGGTGTACGCCGTGAAGACGGTGCTGC
AGAGGCCGCTGAGCCTCATCCAGGGCCCACCTGGCACAGGGAAGACCGTGACGTCTGCCACCAT
CGTCTACCACCTGGCTCGGCAGGGCAACGGACCCGTGCTTGTGTGTGCTCCAAGCAACATCGCC
GTGGACCAGCTGACGGAGAAGATCCACCAGACGGGGCTCAAGGTTGTGCGCCTCTGTGCCAAGA
GCCGCGAGGCCATCGACTCGCCAGTGTCCTTCCTGGCCCTGCACAACCAGATCAGGAACATGGA
CAGCATGCCGGAACTGCAGAAGCTGCAGCAGCTGAAGGACGAGACCGGGGAGCTGTCCTCCGCA
GACGAGAAGCGCTACCGGGCCCTCAAGCGCACGGCCGAGAGGGAGCTGCTCATGAACGCTGATG
TCATCTGCTGCACCTGCGTGGGCGCCGGCGACCCGAGGCTCGCCAAGATGCAGTTCCGCTCCAT
CCTGATTGACGAGAGCACCCAGGCCACGGAGCCCGAGTGCATGGTTCCCGTGGTCCTTGGGGCC
AAGCAGCTGATCCTTGTGGGCGACCACTGCCAGCTGGGCCCGGTGGTGATGTGCAAGAAGGCGG
CGAAGGCCGGGCTGTCGCAGTCTCTCTTCGAGCGCCTGGTGGTGCTGGGCATCCGCCCCATCCG
TCTGCAGGTCCAGTACCGCATGCACCCTGCGCTCAGCGCCTTCCCATCCAACATCTTCTACGAG
GGCTCGCTGCAAAACGGCGTCACTGCAGCCGACCGTGTGAAGAAGGGTTTTGACTTCCAGTGGC
CCCAGCCCGACAAGCCCATGTTCTTCTACGTGACGCAGGGCCAGGAGGAGATCGCCAGCTCGGG
CACGTCCTACCTGAACAGGACGGAAGCTGCCAACGTGGAGAAGATCACCACAAAGCTGCTCAAG
GCCGGCGCCAAACCCGACCAGATCGGCATCATCACGCCCTACGAGGGCCAGCGCTCCTACCTGG
TGCAGTACATGCAGTTCAGCGGCTCCCTGCACACCAAGCTATACCAGGAGGTAGAGATCGCCAG
CGTGGACGCCTTTCAGGGCCGGGAGAAGGACTTCATCATCCTGTCCTGTGTGCGGGCCAATGAG
CACCAAGGAATCGGCTTTCTAAACGACCCCCGGCGTCTCAACGTGGCCCTGACCAGAGCTAGGT
ACGGCGTGATCATCGTGGGCAACCCAAAGGCGCTGTCGAAGCAGCCGCTGTGGAACCACCTGCT
GAACTACTACAAGGAGCAGAAGGTGCTGGTGGAGGGGCCGCTCAACAACCTGCGCGAGAGCCTC
ATGCAGTTCAGCAAGCCGCGCAAGCTGGTCAACACCATCAACCCGGGGGCCCGCTTCATGACAA
CAGCCATGTATGACGCCCGAGAGGCCATCATCCCGGGGTCCGTGTACGACCGCAGCAGCCAGGG
CCGGCCGTCGAACATGTACTTCCAGACGCACGACCAGATCGGCATGATCAGCGCGGGCCCGAGC
CACGTTGCCGCCATGAACATCCCCATCCCCTTCAACCTGGTCATGCCGCCCATGCCGCCGCCCG
GCTACTTCGGACAGGCCAACGGGCCGGCGGCCGGCCGGGGCGCCCCGAAGAGTAAGACCGGTCG
TGGGGGGCGCCAGAAGAACCGCTTCGGGCTACCTGGGCCCAGCCAGACCACGCTCCCCAACAGC
CAGGCCAGCCAGGACGTGGCGTCGCAGCCCTTCTCGCAGGGCGCGCTGACGCAGGGCTACATCT
CCATGAGCCAGCCCTCCCAGATGAGCCAGCCCGGCCTCTCCCAGCCCGAGCTGTCCCAGGACAG
TTACTTGGGTGACGAGTTTAAATCACAGATTGACGTGGCACTGTCGCAAGACTCCACGTACCAG
GGAGAGCGGGCGTACCAGCACGGCGGGGTGACAGGGCTGTCCCAGTACTAGAAGGTGGCGGCGG
AAGAGCTAAGCTCTGTGGCTTAGTGCATCAGCATCTTATTCTGGGTAATAAAAAATAAAAATAA
ATGGATACCTGTTTTCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAACAGGAGAGGGAGAG
GAGCCGCCGAGGGAGAGGAGCCGAGCACGAGCGCCCTGTGGGCGGCAGCGGCTGGCGGCGGCGG
CGGCAGCGCACGAGGAGGAGAAGGGAGAGCAGACGGGAGGTGGCGGCCCAGGAGCCCGCCGCCC
GGGAGGCCCAGCTCGCCGCGCACCCCTGGGCCCGCGACCAGGCGGAGGGAGAAGACCCTCATCT
CAGAGTAGCCCTTTCCTCTGGTTTTTCTTTCTTTTCTCTTTTATTGAAAGGGGACTACATTTTA
GCAGGAAAAAACTTGGCGTTTCTGTGCCCTAGCAGGCTGCTGGCGGCGGCCGTGCCAGCCGGGC
CCGAGGAGCGCAGCTCCCGGACTGCCCAGGTCCCCTGGCCTGTGTTCTAAGGGTTTCACTTAAA
GAAAATATGGTGTTTTGGGTTTTTCTGTTTGTTTTTTTAAAGATTTTTCAAAGAAGTACTGAAA
AATACTTTTCTAAGTTTGTCTCTAAGATCTTAGCGGTGGACCTGGGAGTCGTGAGCAGCTTCCA
GAAACGAGGTGTCAGTTGGCGCACCCGGAGGCCGGAGCGACGCCGGACGCAGTCTCAGGAGGAT
GTTTAAGGTTTTGCTTCAGCGGCTTCGCAATGTGGGCAGCGGCCCGGCCCAGAGGCCCACGCGT
GCCTCCAAGGACTCCGAGGAGCGTGGCCACTTCCACGCCGTGGACTCGCCGGGGCTCTGGCCGC
CCCATGGAAGGTGCTCGTGGCCCCACAGCGACCTCAGCCAGGACTGCCTGGGGCAGGAAGGCGC
CATTCCGTTCCCGGCCCGGTGGTTTTTGTCCCTTGGGGTGTGGTGGAAGGTGACAGCCAGAGGG
CTGTCCCCATCCTGGTGGGCTCCCAGTCCCGTGCTGCCCACAGCCTGCCTGCCGGCCCAGCCTG
CTGACGGTGGGGAAGGGAGCATACCGAGGGGTGGCCGGCTCTGCCCGAGGGCCTGGAGTCAGCT
CCTCCGTGGACAGTGCGTGGCGCTGCTCTGGGCGCAGGGCGAGAGTTGGTCGCGAGTCGGGCGG
CCTCCCCTGCCCCGCGCGCCCTGGGAGCCAGCTGACCGGACGCAGGGCCGCCTGCCTGGGGCCG
GGATGCTTTCCCATCGCAGGCTTTTGGTTCCCTTCTTCCCTAGGCCGCTAGAGGCACCCCGCCA
GGCCCCCTTCCCCGCCCGCCCTGCCTCTGCCTGTGCCCTTTGCTTTGCCCTCCACCTTCCCAGC
AGTCACTCTTGAGTTCTACCGGTCGGCAAGCATCCGTACCAAGGCAATGTAACTTGATTTTTGG
TCAATATGTTTTAAGCTCTTTTGTCACCAATAAAATCTTAATAAACA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013362675	(Get FASTA)	NCBI Sequence Viewer
	XP_013362676	(Get FASTA)	NCBI Sequence Viewer
	XP_013362677	(Get FASTA)	NCBI Sequence Viewer
	XP_013362678	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005691
	ENSCLAP00000005691.1
	ENSCLAP00000005692.1
	ENSCLAP00000005693.1

RefSeq Acc Id:	XP_013362678 ⟸ XM_013507224
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C2UXG2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPGG AGAGGAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPIHACSYCGI HDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVF LLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQ ITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKL KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVP DNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQ GNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQ ATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRM HPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRT EAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR EKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQK VLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYF QTHDQIGMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKSKTGRGGRQKNR FGLPGPSQTTLPNSQASQDVASQPFSQGALTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFK SQIDVALSQDSTYQGERAYQHGGVTGLSQY hide sequence

RefSeq Acc Id:	XP_013362677 ⟸ XM_013507223
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2UXG2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPGG AGAGGAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPIHACSYCGI HDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVF LLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQ ITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKL KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVP DTNLTQRPDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYI YHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATI VYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD SMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSI LIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSG TSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIAS VDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLL NYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQG RPSNMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKSKTGR GGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQGYISMSQPSQMSQPGLSQPELSQDS YLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY hide sequence

RefSeq Acc Id:	XP_013362676 ⟸ XM_013507222
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UXG2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPGG AGAGGAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPIHACSYCGI HDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVF LLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQ ITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKL KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLAPL WKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSV SGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVT SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQI RNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ FRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI RPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI ASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEV EIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLW NHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDR SSQGRPSNMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKS KTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQGYISMSQPSQMSQPGLSQPEL SQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY hide sequence

RefSeq Acc Id:	XP_013362675 ⟸ XM_013507221
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UXG2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPGG AGAGGAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPIHACSYCGI HDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVF LLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQ ITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKL KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLAPL WKGIGHVIKVPDTNLTQRPDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTF AVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPP GTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF LALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGD PRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFE RLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLH TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAII PGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQANGPAA GRGAPKSKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQGYISMSQPSQMSQP GLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY hide sequence

Ensembl Acc Id:

ENSCLAP00000005693 ⟸ ENSCLAT00000005794

Ensembl Acc Id:

ENSCLAP00000005692 ⟸ ENSCLAT00000005793

Ensembl Acc Id:

ENSCLAP00000005691 ⟸ ENSCLAT00000005792

Protein Domains

UPF1

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000004037	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000005792	ENTREZGENE
	ENSCLAT00000005792.1	UniProtKB/TrEMBL
	ENSCLAT00000005793.1	UniProtKB/TrEMBL
	ENSCLAT00000005794.1	UniProtKB/TrEMBL
Gene3D-CATH	2.40.30.230	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
	6.10.140.1240	UniProtKB/TrEMBL
InterPro	DNA2/NAM7-like	UniProtKB/TrEMBL
	DNA2/NAM7-like_C	UniProtKB/TrEMBL
	DNA2/NAM7_AAA_11	UniProtKB/TrEMBL
	Helicase/UvrB_N	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	SF1_C_Upf1	UniProtKB/TrEMBL
	UPF1_1B_dom	UniProtKB/TrEMBL
	UPF1_CH/ZBD	UniProtKB/TrEMBL
NCBI Gene	Upf1	ENTREZGENE
PANTHER	PTHR10887	UniProtKB/TrEMBL
	REGULATOR OF NONSENSE TRANSCRIPTS 1	UniProtKB/TrEMBL
Pfam	AAA_11	UniProtKB/TrEMBL
	AAA_12	UniProtKB/TrEMBL
	ResIII	UniProtKB/TrEMBL
	UPF1_1B_dom	UniProtKB/TrEMBL
	UPF1_Zn_bind	UniProtKB/TrEMBL
PROSITE	UPF1_CH_RICH	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8C2UW59_CHILA	UniProtKB/TrEMBL
	A0A8C2UXG2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2UZS5_CHILA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-01-29	Upf1	UPF1 RNA helicase and ATPase		UPF1, RNA helicase and ATPase	Symbol and/or name change	5135510	APPROVED
2016-08-03	Upf1	UPF1, RNA helicase and ATPase		UPF1 regulator of nonsense transcripts homolog (yeast)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar