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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of rDNA heterochromatin formation
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Accession:GO:0061187 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of rDNA heterochromatin formation.
Synonyms:exact_synonym: regulation of ribosomal DNA heterochromatin assembly
 broad_synonym: regulation of chromatin silencing at rDNA

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regulation of rDNA heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102008188 core histone macro-H2A.1 NOT|involved_in ISO (PMID:24071584) UniProt PMID:24071584 NCBI chrNW_004955408:30,497,531...30,550,095
Ensembl chrNW_004955408:30,497,531...30,550,118 		JBrowse link
negative regulation of rDNA heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phf2 PHD finger protein 2 involved_in ISO (PMID:20129925) UniProt PMID:20129925 NCBI chrNW_004955515:4,428,068...4,471,642
Ensembl chrNW_004955515:4,429,957...4,471,641 		JBrowse link
G Phf8 PHD finger protein 8 involved_in ISO (PMID:20208542) UniProt PMID:20208542 NCBI chrNW_004955475:1,105,619...1,230,758
Ensembl chrNW_004955475:1,105,619...1,230,756 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    cellular process 11480
      cellular component organization or biogenesis 5364
        cellular component organization 5235
          nucleolar chromatin organization 10
            rDNA heterochromatin formation 9
              regulation of rDNA heterochromatin formation 3
                negative regulation of rDNA heterochromatin formation 2
                positive regulation of rDNA heterochromatin formation 0
Path 2
Term Annotations click to browse term
  biological_process 12346
    biological regulation 8880
      regulation of biological process 8618
        regulation of metabolic process 4808
          regulation of biosynthetic process 3812
            regulation of cellular biosynthetic process 3728
              regulation of macromolecule biosynthetic process 3635
                regulation of gene expression 3524
                  negative regulation of gene expression 965
                    negative regulation of gene expression, epigenetic 120
                      heterochromatin formation 92
                        facultative heterochromatin formation 44
                          rDNA heterochromatin formation 9
                            regulation of rDNA heterochromatin formation 3
                              negative regulation of rDNA heterochromatin formation 2
                              positive regulation of rDNA heterochromatin formation 0
paths to the root