Creb1 (cAMP responsive element binding protein 1) - Rat Genome Database

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Gene: Creb1 (cAMP responsive element binding protein 1) Chinchilla lanigera
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Symbol: Creb1
Name: cAMP responsive element binding protein 1
RGD ID: 9019894
Description: ENCODES a protein that exhibits arrestin family protein binding (ortholog); cAMP response element binding (ortholog); DNA binding (ortholog); INVOLVED IN aging (ortholog); axonogenesis (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN adenosine signaling pathway; follicle-stimulating hormone signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH Angiomatoid Fibrous Histiocytoma (ortholog); brain ischemia (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN ATF4-CREB1 transcription factor complex (ortholog); axon (ortholog); chromatin (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: cyclic AMP-responsive element-binding protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554577,431,736 - 7,491,149 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554577,424,403 - 7,490,630 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
aging  (ISO)
axonogenesis  (ISO)
cellular response to fatty acid  (ISO)
cellular response to growth factor stimulus  (ISO)
cellular response to hepatocyte growth factor stimulus  (ISO)
cellular response to insulin-like growth factor stimulus  (ISO)
cellular response to leukemia inhibitory factor  (ISO)
cellular response to nerve growth factor stimulus  (ISO)
cellular response to platelet-derived growth factor stimulus  (ISO)
cellular response to retinoic acid  (ISO)
cellular response to transforming growth factor beta stimulus  (ISO)
cellular response to zinc ion  (ISO)
chemotaxis to arachidonic acid  (ISO)
circadian rhythm  (ISO)
lactation  (ISO)
lung epithelium development  (ISO)
lung saccule development  (ISO)
mammary gland development  (ISO)
memory  (ISO)
negative regulation of gene expression  (ISO)
negative regulation of neuron death  (ISO)
negative regulation of transcription by competitive promoter binding  (ISO)
pituitary gland development  (ISO)
positive regulation of apoptotic process  (ISO)
positive regulation of cardiac muscle tissue development  (ISO)
positive regulation of fat cell differentiation  (ISO)
positive regulation of hormone secretion  (ISO)
positive regulation of lipid biosynthetic process  (ISO)
positive regulation of long-term synaptic potentiation  (ISO)
positive regulation of multicellular organism growth  (ISO)
positive regulation of osteoclast differentiation  (ISO)
positive regulation of RNA polymerase II transcription preinitiation complex assembly  (ISO)
positive regulation of transcription by RNA polymerase II  (ISO)
positive regulation of transcription, DNA-templated  (ISO)
positive regulation of transforming growth factor beta3 production  (ISO)
protein phosphorylation  (ISO)
protein stabilization  (ISO)
regulation of apoptotic process  (ISO)
regulation of cell size  (ISO)
regulation of circadian rhythm  (ISO)
regulation of fibroblast proliferation  (ISO)
regulation of glial cell proliferation  (ISO)
regulation of transcription, DNA-templated  (ISO)
response to activity  (ISO)
response to glucagon  (ISO)
response to hypoxia  (ISO)
response to L-glutamate  (ISO)
response to nicotine  (ISO)
response to organic substance  (ISO)
response to xenobiotic stimulus  (ISO)
secretory granule organization  (ISO)
transcription by RNA polymerase II  (ISO)
transforming growth factor beta receptor signaling pathway  (ISO)
type I pneumocyte differentiation  (ISO)
visual learning  (ISO)

Cellular Component

References


Genomics

Comparative Map Data
Creb1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554577,431,736 - 7,491,149 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554577,424,403 - 7,490,630 (-)NCBIChiLan1.0ChiLan1.0
CREB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2207,529,737 - 207,605,988 (+)EnsemblGRCh38hg38GRCh38
GRCh382207,529,943 - 207,605,988 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372208,394,686 - 208,470,712 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362208,102,931 - 208,171,818 (+)NCBINCBI36hg18NCBI36
Build 342208,220,191 - 208,289,074NCBI
Celera2202,156,105 - 202,231,803 (+)NCBI
Cytogenetic Map2q33.3NCBI
HuRef2200,237,266 - 200,313,048 (+)NCBIHuRef
CHM1_12208,400,466 - 208,476,105 (+)NCBICHM1_1
Creb1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39164,571,963 - 64,643,707 (+)NCBIGRCm39mm39
GRCm39 Ensembl164,571,804 - 64,643,707 (+)Ensembl
GRCm38164,532,794 - 64,604,548 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl164,532,645 - 64,604,548 (+)EnsemblGRCm38mm10GRCm38
MGSCv37164,579,378 - 64,651,122 (+)NCBIGRCm37mm9NCBIm37
MGSCv36164,467,080 - 64,538,824 (+)NCBImm8
Celera165,034,311 - 65,105,954 (+)NCBICelera
Cytogenetic Map1C2NCBI
cM Map132.74NCBI
Creb1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2965,903,511 - 65,972,562 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl965,903,547 - 65,970,816 (+)Ensembl
Rnor_6.0971,229,753 - 71,298,994 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl971,230,108 - 71,293,435 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0971,277,171 - 71,346,198 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4963,170,785 - 63,234,727 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1963,317,766 - 63,381,709 (+)NCBI
Celera963,310,784 - 63,374,139 (+)NCBICelera
Cytogenetic Map9q32NCBI
CREB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B212,891,261 - 212,963,584 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B212,891,261 - 212,958,130 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B94,762,796 - 94,836,304 (+)NCBIMhudiblu_PPA_v0panPan3
CREB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13715,921,214 - 15,978,492 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3715,939,138 - 15,977,556 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3716,804,994 - 16,867,966 (+)NCBI
ROS_Cfam_1.03715,856,953 - 15,919,649 (+)NCBI
UMICH_Zoey_3.13715,802,749 - 15,865,587 (+)NCBI
UNSW_CanFamBas_1.03715,775,840 - 15,838,520 (+)NCBI
UU_Cfam_GSD_1.03715,785,052 - 15,847,761 (+)NCBI
Creb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303164,086,248 - 164,150,269 (+)NCBI
SpeTri2.0NW_0049366313,721,307 - 3,785,346 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CREB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15110,697,408 - 110,771,755 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115110,705,548 - 110,773,037 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215122,245,218 - 122,278,060 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CREB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11093,316,774 - 93,395,187 (+)NCBI
ChlSab1.11093,316,774 - 93,395,187 (+)NCBI
ChlSab1.11093,316,774 - 93,395,187 (+)NCBI
ChlSab1.11093,316,774 - 93,395,187 (+)NCBI
ChlSab1.1 Ensembl1093,316,840 - 93,388,832 (+)Ensembl
Vero_WHO_p1.0NW_023666040105,980,378 - 106,058,783 (-)NCBI
Creb1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247658,374,160 - 8,436,969 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000008487   ⟹   ENSCLAP00000008360
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554577,431,736 - 7,491,149 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000008488   ⟹   ENSCLAP00000008361
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554577,431,736 - 7,491,149 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000008489   ⟹   ENSCLAP00000008362
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554577,447,594 - 7,470,732 (-)Ensembl
RefSeq Acc Id: XM_005396981   ⟹   XP_005397038
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554577,424,403 - 7,490,619 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005396982   ⟹   XP_005397039
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554577,424,403 - 7,490,617 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013520690   ⟹   XP_013376144
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554577,424,403 - 7,490,623 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013520691   ⟹   XP_013376145
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554577,424,403 - 7,490,630 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013520692   ⟹   XP_013376146
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554577,424,403 - 7,490,621 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013520693   ⟹   XP_013376147
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554577,424,403 - 7,490,624 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001236401
RefSeq Status:
Type: NON-CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554577,424,403 - 7,490,623 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005397038   ⟸   XM_005396981
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005397039   ⟸   XM_005396982
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_013376145   ⟸   XM_013520691
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013376147   ⟸   XM_013520693
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013376144   ⟸   XM_013520690
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013376146   ⟸   XM_013520692
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCLAP00000008360   ⟸   ENSCLAT00000008487
RefSeq Acc Id: ENSCLAP00000008361   ⟸   ENSCLAT00000008488
RefSeq Acc Id: ENSCLAP00000008362   ⟸   ENSCLAT00000008489


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005853 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000008360 ENTREZGENE
  ENSCLAP00000008361 ENTREZGENE
Ensembl Transcript ENSCLAT00000008487 ENTREZGENE
  ENSCLAT00000008488 ENTREZGENE
NCBI Gene Creb1 ENTREZGENE