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Gene: Slit3 (slit guidance ligand 3) Chinchilla lanigera

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Symbol:

Slit3

Name:

slit guidance ligand 3

RGD ID:

8766323

Description:

ENCODES a protein that exhibits Roundabout binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Brain Injuries (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN extracellular space (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

slit homolog 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLIT3 (slit guidance ligand 3)	NCBI	Ortholog
Mus musculus (house mouse):	Slit3 (slit guidance ligand 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Slit3 (slit guidance ligand 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLIT3 (slit guidance ligand 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLIT3 (slit guidance ligand 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slit3 (slit guidance ligand 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLIT3 (slit guidance ligand 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLIT3 (slit guidance ligand 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slit3 (slit guidance ligand 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	21,722,632 - 22,322,917 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	21,719,487 - 22,322,958 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atrial fibrillation (ISO)

Brain Injuries (ISO)

congenital diaphragmatic hernia (ISO)

Diaphragmatic Hernia (ISO)

immunodeficiency 40 (ISO)

Spinal Cord Injuries (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

animal organ morphogenesis (ISO)

aortic valve morphogenesis (ISO)

apoptotic process involved in luteolysis (ISO)

atrioventricular valve morphogenesis (ISO)

axon extension involved in axon guidance (ISO)

axon guidance (ISO)

cellular response to hormone stimulus (ISO)

chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration (ISO)

negative chemotaxis (ISO)

negative regulation of cell growth (ISO)

negative regulation of cell population proliferation (ISO)

negative regulation of chemokine-mediated signaling pathway (ISO)

negative regulation of gene expression (ISO)

response to cortisol (ISO)

Roundabout signaling pathway (ISO)

spinal cord development (ISO)

ventricular septum morphogenesis (ISO)

Cellular Component

extracellular space (ISO)

Molecular Function

Roundabout binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Slit3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	21,722,632 - 22,322,917 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	21,719,487 - 22,322,958 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLIT3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	168,661,740 - 169,301,139 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	168,661,740 - 169,301,139 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	168,088,745 - 168,728,143 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	168,025,857 - 168,660,554 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	168,025,856 - 168,660,554	NCBI
Celera	5	164,128,856 - 164,759,439 (-)	NCBI		Celera
Cytogenetic Map	5	q34-q35.1	NCBI
HuRef	5	163,187,021 - 163,825,867 (-)	NCBI		HuRef
CHM1_1	5	167,521,662 - 168,160,538 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	169,196,497 - 169,836,714 (-)	NCBI		T2T-CHM13v2.0

Slit3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	35,012,283 - 35,599,334 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	35,012,051 - 35,599,334 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	35,121,456 - 35,708,507 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	35,121,224 - 35,708,507 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	34,934,958 - 35,522,009 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	34,964,879 - 35,551,735 (+)	NCBI		MGSCv36	mm8
Celera	11	38,900,451 - 39,489,864 (+)	NCBI		Celera
Cytogenetic Map	11	A4	NCBI
cM Map	11	20.29	NCBI

Slit3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	20,075,929 - 20,660,704 (+)	NCBI		GRCr8
mRatBN7.2	10	19,571,798 - 20,156,634 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	19,571,684 - 20,156,634 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	24,327,438 - 24,913,272 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	23,815,979 - 24,401,801 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	19,295,723 - 19,880,358 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	19,924,200 - 20,517,918 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	20,320,878 - 20,518,518 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	19,801,599 - 20,392,415 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	19,983,166 - 20,576,689 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	20,098,220 - 20,577,738 (+)	NCBI
Celera	10	19,201,522 - 19,782,964 (+)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

SLIT3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	163,822,402 - 164,461,801 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	161,966,392 - 162,604,913 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	164,029,432 - 164,664,156 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	170,793,386 - 171,425,236 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	170,793,731 - 171,425,242 (-)	Ensembl	panpan1.1		panPan2

SLIT3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	42,506,680 - 43,099,053 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	42,508,426 - 43,094,714 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	42,466,027 - 43,055,860 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	42,928,562 - 43,521,077 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	42,928,887 - 43,516,993 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	42,700,926 - 43,290,974 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	42,893,778 - 43,485,410 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	43,399,255 - 43,991,187 (+)	NCBI		UU_Cfam_GSD_1.0

Slit3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	96,574,901 - 97,136,840 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936622	565,346 - 752,299 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936622	191,165 - 756,552 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLIT3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	54,553,426 - 55,220,296 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	54,551,536 - 55,221,427 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	59,123,810 - 59,790,312 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLIT3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	70,890,096 - 71,524,002 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	70,885,737 - 71,106,703 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	7,156,377 - 7,794,096 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slit3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624733	20,683,814 - 21,291,088 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624733	20,683,680 - 21,293,663 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005376304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013509145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013509153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01008562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008567	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01008573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01095441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01128089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000022806 ⟹ ENSCLAP00000022598

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955408	21,722,632 - 22,322,917 (-)	Ensembl

RefSeq Acc Id:

XM_005376304 ⟹ XP_005376361

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955408	21,719,487 - 22,322,958 (-)	NCBI

Sequence:

show sequence

GCCGCCGCCGCCGCCGCCCGGCGCGCCCTGCTCCGCCCGCGCCCCGTGCGCCTGAGCGCCGAGC
TCGCCCCTCCTCCGCGCCAACTCCGCCGCCCGTTCCCCAGGCCGCCCGCGCTCCCCGCGTGCCT
CCCGGGCTCCACGCGCCTCGCCCCGCCGAGGCAGCTCCTGAGGACGCGGGCCCCTGCACACCAT
GGCCCCCGGGCGGACAGGGGCCGGCGCCGCCGTGCGCTCTCGCCTGGCGCTGGCCTTGACGCTA
GCGAGCGTCCTGAGCGGGCCCCCAGCCGCCGCCTGCCCCACCAAGTGTACCTGCTCCGCCGCCA
GCGTGGACTGCCACGGGCTGGGCCTCCGAGCCGTTCCCCGGGGCATCCCCCGCAACGCCGAGCG
CCTTGACCTGGACAGAAATAACATCACCAGGATCACCAAGATGGACTTTGCTGGGCTCAAGAAC
CTCCGAGTCTTGCATCTGGAAGACAATCAGGTCAGCATCATTGAGAGAGGCGCCTTCCAGGATC
TGAAGCAGCTGGAGCGTTTGCGTCTGAACAAAAATAAGCTCCAGGTCCTTCCAGAAATGCTTTT
CCAGAGCACACCGAAGCTTACCAGACTAGATCTGAGTGAGAACCAGATCCAGGGGATCCCGAGG
AAGGCATTCCGTGGCATCGCTGACGTGAAGAACCTGCAACTGGACAACAACCACATCAGCTGCA
TTGAAGATGGAGCCTTCCGAGCGCTGCGCGATCTGGAGATCCTCACACTCAACAACAACAACAT
TAGCCGCATCCTGGTCACCAGCTTCAACCACATGCCGAAGATCCGGACTCTGCGCCTCCACTCC
AATCACCTGTACTGTGACTGCCACCTGGCCTGGCTCTCAGACTGGCTGCGACAGAGAAGGACAA
TCGGCCAGTTCACACTCTGCATGGCTCCTGTGCACCTAAGGGGCTTCAATGTGGCGGACGTGCA
GAAGAAAGAGTATGTGTGTCCAGGTCCCCATTCAGAGGCTCCATCCTGCAACGCCAACTCGCTC
TCATGCCCCTCCACCTGCACTTGCAGTAATAATATCGTGGACTGTCGAGGAAAAGGCTTGACCG
AAATCCCTGCCAACTTGCCAGAGAGCATCATTGAAATACGCCTAGAACAGAACTCCATCAAATC
CATCCCCGCGGGAGCCTTCACCCCGTACAAGAAACTGAAGCGAATAGACATCAGCAAGAATCAG
ATATCGGACATAGCTCCAGATGCCTTCCAGGGCCTGAAGTCTCTCACATCGCTAGTTCTCTATG
GGAACAAGATCACCGAGATTGCCAAGGGACTGTTTGATGGGCTGGTGTCCCTGCAGCTGCTCCT
CCTCAATGCCAACAAGATCAACTGCTTGCGGGTGAACACCTTCCAGGACCTACAGAACCTCAAC
TTGCTCTCCCTGTACGACAACAAGCTGCAGACCATCAGCAAGGGGCTCTTTGCCCCTCTGCAGT
CCATCCAGACGCTCCACTTAGCCCAAAACCCGTTTGTGTGCGATTGCCACTTGAAGTGGCTGGC
TGACTACCTCCAGGACAACCCCATCGAGACAAGCGGGGCCCGCTGCAGCAGCCCACGCAGGCTT
GCCAACAAGCGCATCAGCCAGATCAAGAGCAAGAAGTTCCGCTGCTCAGGCTCCGAGGACTACC
GCAGCAGGTTCAGCAGTGAGTGCTTCATGGACCTCGTGTGCCCCGAGAAGTGCCGCTGTGAGGG
CACCATTGTGGATTGCTCTAACCAGAAGCTGGCCCGCATCCCGAGCCATCTTCCAGAATATGTC
ACCGATCTGCGACTGAATGACAATGACATATCTGTCCTGGAGGCCACCAGCATCTTCAAGAAGT
TGCCCAACCTGCGGAAAATAAACCTGAGCAACAATAAGATCAAGGAGGTGCGAGAGGGAGCCTT
TGATGGAGCAGCCGGCGTGCAGGAGCTGATGCTGACAGGGAACCAGCTGGAGACTGTGCATGGG
CGCACGTTCCGCGGACTCAGTGGCCTTAAGACCCTGATGCTGAGGAGCAACGAGATCAGCTGTG
TGAACAACGACACCTTCGCTGGCCTGAGCTCTGTGAGGCTACTTTCCCTCTACGACAATCGGAT
CACCACCATCACCCCTGGAGCCTTCACCACGCTGGTCTCCCTGTCCACCATCAACCTACTGTCC
AACCCCTTCAACTGCAACTGCCACCTGGCCTGGCTGGGCAAGTGGCTGCGGAAGAGGCGCATCG
TCAGCGGGAACCCCCGGTGCCAGAAGCCCTTCTTCCTGAAGGAGATCCCCATCCAGGACGTGGC
CAGCCAGGACTTCACCTGCGACGGCAACGACGAGAGCAGCTGCCAGCTGAGCCCGCGCTGTCCA
GAGCAGTGCACCTGCGTGGACACAGTGGTGCGGTGCAGCAACAAGGGCCTCCGCGCCCTCCCGA
AGGGCATGCCCAAGGACGTGACTGAGCTGTACCTGGAAGGAAATCACTTAACAGCTGTACCCAG
AGAGCTGTCTGCGCTCCGACACCTGACACTTATTGACCTGAGCAACAACAGCATCGGCGTCCTG
ACCAATTACACCTTCAGCAACATGTCTCACCTCTCGACTCTGATCCTGAGCTACAACCGGCTGA
GATGCATCCCTATCCATGCCTTCAACGGGCTGCGGTCTCTCCGTGTGCTAACTCTTCATGGCAA
TGACATTTCCAGCGTTCCTGAAGGCTCCTTCAATGATCTGACATCTCTTTCCCACCTGGCACTG
GGAACCAACCCGCTCCACTGTGACTGCAGTCTGCGTTGGTTGTCGGAGTGGGTGAAGGCAGGGT
ACAAGGAGCCTGGCATTGCCCGCTGCAGTAGCCCTGAGTCCATGGCCGACAGACTGCTGCTCAC
CACTCCCACCCACAGGTTCCAGTGCAAAGGTCCTGTGGACATCAACATTGCGGCCAAGTGCAAT
GCTTGCCTCTCGAGTCCGTGCAAGAACAATGGGACGTGCACTGCAGACCCCGTGGAGCAGTACC
GCTGCGCCTGCCCCTACAGCTACAAGGGCAAGGACTGCACTGTGCCCATCAACACCTGCATCCA
GAACCCCTGTCAGCACGGAGGCACCTGCCACCTGAGTGAGAGCCACAAGGATGGGTTCAGCTGC
TCCTGCCCCCTGGGCTTTGAGGGGCAGCGGTGTGAAATCAACCCAGATGACTGCGAGGACAATG
ACTGTGAAAACAATGCTACTTGTGTGGATGGGATCAACAACTACGTGTGTGTGTGCCCACCTAA
CTACACAGGTGAGCTGTGTGATGAGGTGATTGACCACTGCGTGCCTGAGGTGAACCTCTGTCAA
CATGAGGCCAAGTGCATCTCCCTGGACAAAGGATTCAGGTGTGACTGTGTCCCTGGCTACAGCG
GGAAGCTCTGCGAGACAGACAAGGATGACTGCGTGACTCACAAGTGCCGCCATGGGGCCCAGTG
TGTGGACGCGGTCAATGGCTACACGTGCATCTGCCCCCAGGGCTTCAGTGGGGTCTTCTGCGAG
CACCCCCCACCCATGGTCCTGCTGCAGACCAGCCCTTGTGACCAGTACGAGTGCCAGAACGGGG
CACAGTGCATCGTGGTGCAGCAGGAACCCACCTGCCGCTGCCCCCCGGGCTTCGCCGGCCCCAG
GTGCGAGAAGCTCATCACGGTCAACTTCGTGGGCAAAGACTCCTACGTGGAACTGGCCTCTGCC
AAGGTCCGGCCCCAGGCCAACATCTCCCTGCAGGTGGCCACTGACAAGGACAATGGCATCCTTC
TGTACAAGGGAGACAACGACCCCCTGGCACTGGAGCTGTACCAGGGCCATGTAAGGCTCGTCTA
CGACAGCTTGAGCTCCCCTCCAACCACAGTGTACAGTGTGGAGACAGTAAATGATGGACAATTC
CACAGTGTGGAGCTGGTGATGCTAAACCAGACCTTGAACCTGGTAGTGGATAAAGGAGCACCAA
AGAGCCTTGGGAAGCTCCAGAAGCAGCCAGCAGTCGGCATCAACAGCCCCCTCTACCTTGGAGG
TATTCCCACCTCCACGGGCCTCTCTGCATTGCGCCAGGGCACCGACCGGCCACTGGGTGGATTC
CACGGCTGCATCCATGAAGTGCGCATTAACAATGAGCTACAGGACTTCAAGGCCCTCCCGCCAC
AGTCCCTGGGGGTCTCTCCGGGCTGCAAGTCCTGCACTGTGTGCAAGCATGGCCTGTGCCGCTC
AGTTGAGAAAGACAGTGTGGTATGTGAGTGCCACCCGGGCTGGACTGGCCCGCTGTGTGACCAG
GAAGCCCGGGACCCCTGCTTCAGCCACAGCTGCAACCACGGAAAGTGTGTGGCAACCGGGAGCT
CGTATGTGTGCAAATGTGCTGAGGGCTACGGAGGAGCTTTGTGTGACCACAAGAATGATTCTGC
CCACGCGTGCTCAGCCTTCAAGTGCCACCATGGACAGTGCCACATCTCAGATCGAGGGGCGCCC
TCCTGCCTGTGCCAGCCTGGCTTTAGTGGGGAGCACTGTGAACAAGAGAATCCGTGTCTGGGGG
AGGTTGTCCGAGAAGCAATTCACCGTCAGAAAGGTTACACATCGTGTGCCACCGCCTCCAAAGT
GCCCATGATGGAATGCCGCGGGGGCTGCGGGCCCCAGTGCTGCCAGCCCATCCGCAGCAAGCGA
CGGAAATACGTCTTCCAGTGCACAGATGGCTCCTCATTCGTGGAAGAGGTGGAGAGACACTTGG
AGTGTGGCTGCCGCCCGTGTTCCTAAGCCCCGCTGCCCGCACGCGCACCCACCGCCTCTCAGAC
TCCAGCTTGGTGGGGCCCAGGACAGCCACATGGCCCCCCATTGAGATTCAGAACGAAGGAGAGA
AAGCTGGAGAGCAAGAAAAAAAGAAGAGAATATTAAGTATATTGTAAAATAAACAAAAAATAGA
ACTTATTTTTATTATGGAAAGTGACTATTTTCATCTTTTATTATATAAATATATCACACCAGCT
GAGTATATGTACCATATAGTGAGTTATTTTTACTGAGTTCTTGTTTTGTGATGTGTATTTTTCG
TGGTTTTACAAACAGCTGTTTTAAAATTTTAAGACAAAAAAGACTAATAAAAATGTTTTAAACA
AAAGGGTAAGAATAAAGAAATGAGAGCCTGTCTGAGGAAGCAGGAGGACATTTGCATGATTGTG
AAGCACTCACATGTCCACAGGAACCAAGACCTGCTTCCCGAGCTCAGGAAAAAGGAGTAAGAGA
AAGACAGAGAAGGAAAAGATTGTTCTTAGTTTCTTGTTTTTAACTCCTTTTTTTCTCTCCCCTA
AAAGCACCCACTTTTTAAGGGTTCTGGTTGTCTCTGCCCAAGATGCCTATTGCTTCCAGGAGAA
AGCGGCCCTGGCCTTCCTGAGACTTGCTGCAGCTCACAATTGCTTTCTGCCTGCCGTGGGCACG
CTGCAAGATCTGGGGCCACAGGAAGACCCCTTTCTCCTTCCAGGGAGGCCCTAGTTTCCATTAG
AGACCTGACCACCTACACCTTGCCAAACACTTCATCTGAGCCTATTTTACCAAATTTTAAAGTA
GCTGTTCTTTTCTCTGTAAGAAGGTACTCTTGTGTGAGGCGAAGGAAGACGGTAAGGTTCATAC
AGCTTCCTTAGGCCTTTCCTCCCCTCTCCAGCTGATTTCACACTGGAAGGAAGCCGAGAGAGCA
GAGAGTCCAATGCTGGCATGAAAAGGGCCAGGAGCCAAGCCTGCCCACAGCACTCCCATGTCCA
ACAGGGATTCCGCCACCCGATCCTCTAGGCTACCATCATGGTGATGACCAACTGCCCATCTGTA
GCACTTTCCAATGCACATCTGAACTCTACTTTATTCACCCGTGCCTCTCGGGGGAGAGTAGAGC
AGTGAGCCCTATTTCATAGTTTAGGAAACCTAGGCTCTGTAACTTGCCATAAATCACCCTTCTG
CTAAGTGGAGGACCTGAACCTGGAATCCAGACTCAAAGCTCTAGATTCTTCTCCAGAATGGCTG
AACACAGAAGATTCAGGCAGGTTAAGTTCATCAACAGAGCCCTAAATAAAATAGGAAGCAGATA
ATTTCTCCTCACTTTTCTCCCTGCTTTTATTCTGCTTTATTCATTCCTTGTTCTGCCTCCCTCT
TATACAGAAAAATACTAGATAGAACAAGTACTTGGTATCTAGGAAACATGAGCAAAGGCAGCCG
GTCCAGCTTCTGACCCCATTCCTAAGTGACCTTCCCTGTCCCTGTCATCCCACATCTCTCCTCC
ACCTTCCTTTGCCCCCATGGACCCCTAAGCGTTAGTACTTGTCACCCAGGAGCTCAGCTGTTCC
CAGCTCCCTGCTTCTCAGCATCCACCCCTCCTTGCCCAAGAGCCTCCACTGCTTATATCTCAGG
GAGGACAGTTTGGGATCTTTCAGCTCTGAGTGTCCCCAGAGGAACCTAGTTGCTTTGTGGGGAC
CAATGGTGGGCCAAAGACTCAAGGGAAAAAGAACACAGAGGAACATAAGGCAAGGTAAAGACGA
GCAGGGAGGGGTTTGCTAGAGAAAGTTACTTTAAAATATGCATGTGGATATGTGTTATGTTCTA
GGTACTGTATCTTATTATGGATTTGTTCATAGATTTATTTAGCATTAACTACATTATATCAGAT
ATTCTATTTACTATATATATTTATATACATTCATTTAAGTCTCAAAACAATCATGTTAAAAACA
TTACTGATTCACTTTACAGTTGAATAGACTGAAACACAGAGAAGTTAAGGAATTTACCAAGGAG
AAGATACTAATACATTGCAGAGGTAGGATTTGAACCCAGGCTGTCAGGCTCTAGAACTTGCTCA
CTTAATCATTAAACCACCCTGCTGCTTCTGAGAAAGAAATATATCCCGCCTTTAAGGATCTTAC
AGTCTGAGGTAGAAACAGTAATGAAAATGGACACTTATGTACCCCCTGATGGCAGTTTAAAGAA
CAGAAGTGCTGTTTAAAAAGGAGAATTTCCAATCTTGGGTCTTTGAGGATGAACAGCAGTTTGC
CAAGCCCAGAAAGGGAAGATCAATTTTCCCTGCAACAGCCAAATAAAAAGCAGTAAAATGTTTG
CTAGCCAGAGGTGCCGTGTGGCAGGAGTATGAGATGCACACTGGGAAACAGAGAAACGGGGTAG
ATGTGAAGGCAGGGTTTAAACCACAAAGAGCTACATGTGCCAGGCCAGGCCATACAGAGTCAGA
GAGAGTTTCAGCAGAGGAAAAGTAAGACAAGGTCTGATTGAGAGACAGAGCTGGTAGCAAAGTA
AAGGTGAATCTCTAGCACCCAAAATGGCCTTGGCGCCCCTAGGTCTTCACTCTGTGGCTAGAAA
ACACTGATTTCAAGGTGGACCCCAAGTCTTTCTGGCAGCTCAGAAGCTCAGCCCTGCAAGGGTC
CACCTGATCCTTATTCTACTACCAATACCCTTAACGAGCCTCTCCCCACCCAGTACAAAGTCTG
ATCGGCCTGCCACCTCACGAGCCTCACCCAGGGCCACTGGCGTTCTAGGAAGACTCGTCAGACC
AGTGGCTTTCCCTCTCCTTTCCCAAGGATTTCGGAGCCTCCCTCTTCCACTCACCTTGCGGGCT
TGTTCCTGAATCCAGCCACGGTCAGCCAAAACAGCAAAAAGTCCTGATTCTATCTCGGTGCAGC
TTGCATTGCATAGATTTTGAGCCTTCCCCTCAATTTTGGAAGCACTAACTTTAAGAAATGTCAA
ATGCAAAGAACATTTTTTTAAAATCCTTCCCAAAATGAAGTATCTCTAACAGAATTAAAAACGA
TCTCCTTGAATAGCCAAATTTCTCAGAACAGAAAGCCCCATGGATAGGAAGGCATCTGTTGATT
AATTTGCACCCCGAATTTTTTTTTTTTTTTTTTTT

hide sequence

RefSeq Acc Id:

XM_013509145 ⟹ XP_013364599

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955408	21,737,857 - 22,322,958 (-)	NCBI

Sequence:

show sequence

GCCGCCGCCGCCGCCGCCCGGCGCGCCCTGCTCCGCCCGCGCCCCGTGCGCCTGAGCGCCGAGC
TCGCCCCTCCTCCGCGCCAACTCCGCCGCCCGTTCCCCAGGCCGCCCGCGCTCCCCGCGTGCCT
CCCGGGCTCCACGCGCCTCGCCCCGCCGAGGCAGCTCCTGAGGACGCGGGCCCCTGCACACCAT
GGCCCCCGGGCGGACAGGGGCCGGCGCCGCCGTGCGCTCTCGCCTGGCGCTGGCCTTGACGCTA
GCGAGCGTCCTGAGCGGGCCCCCAGCCGCCGCCTGCCCCACCAAGTGTACCTGCTCCGCCGCCA
GCGTGGACTGCCACGGGCTGGGCCTCCGAGCCGTTCCCCGGGGCATCCCCCGCAACGCCGAGCG
CCTTGACCTGGACAGAAATAACATCACCAGGATCACCAAGATGGACTTTGCTGGGCTCAAGAAC
CTCCGAGTCTTGCATCTGGAAGACAATCAGGTCAGCATCATTGAGAGAGGCGCCTTCCAGGATC
TGAAGCAGCTGGAGCGTTTGCGTCTGAACAAAAATAAGCTCCAGGTCCTTCCAGAAATGCTTTT
CCAGAGCACACCGAAGCTTACCAGACTAGATCTGAGTGAGAACCAGATCCAGGGGATCCCGAGG
AAGGCATTCCGTGGCATCGCTGACGTGAAGAACCTGCAACTGGACAACAACCACATCAGCTGCA
TTGAAGATGGAGCCTTCCGAGCGCTGCGCGATCTGGAGATCCTCACACTCAACAACAACAACAT
TAGCCGCATCCTGGTCACCAGCTTCAACCACATGCCGAAGATCCGGACTCTGCGCCTCCACTCC
AATCACCTGTACTGTGACTGCCACCTGGCCTGGCTCTCAGACTGGCTGCGACAGAGAAGGACAA
TCGGCCAGTTCACACTCTGCATGGCTCCTGTGCACCTAAGGGGCTTCAATGTGGCGGACGTGCA
GAAGAAAGAGTATGTGTGTCCAGGTCCCCATTCAGAGGCTCCATCCTGCAACGCCAACTCGCTC
TCATGCCCCTCCACCTGCACTTGCAGTAATAATATCGTGGACTGTCGAGGAAAAGGCTTGACCG
AAATCCCTGCCAACTTGCCAGAGAGCATCATTGAAATACGCCTAGAACAGAACTCCATCAAATC
CATCCCCGCGGGAGCCTTCACCCCGTACAAGAAACTGAAGCGAATAGACATCAGCAAGAATCAG
ATATCGGACATAGCTCCAGATGCCTTCCAGGGCCTGAAGTCTCTCACATCGCTAGTTCTCTATG
GGAACAAGATCACCGAGATTGCCAAGGGACTGTTTGATGGGCTGGTGTCCCTGCAGCTGCTCCT
CCTCAATGCCAACAAGATCAACTGCTTGCGGGTGAACACCTTCCAGGACCTACAGAACCTCAAC
TTGCTCTCCCTGTACGACAACAAGCTGCAGACCATCAGCAAGGGGCTCTTTGCCCCTCTGCAGT
CCATCCAGACGCTCCACTTAGCCCAAAACCCGTTTGTGTGCGATTGCCACTTGAAGTGGCTGGC
TGACTACCTCCAGGACAACCCCATCGAGACAAGCGGGGCCCGCTGCAGCAGCCCACGCAGGCTT
GCCAACAAGCGCATCAGCCAGATCAAGAGCAAGAAGTTCCGCTGCTCAGGCTCCGAGGACTACC
GCAGCAGGTTCAGCAGTGAGTGCTTCATGGACCTCGTGTGCCCCGAGAAGTGCCGCTGTGAGGG
CACCATTGTGGATTGCTCTAACCAGAAGCTGGCCCGCATCCCGAGCCATCTTCCAGAATATGTC
ACCGATCTGCGACTGAATGACAATGACATATCTGTCCTGGAGGCCACCAGCATCTTCAAGAAGT
TGCCCAACCTGCGGAAAATAAACCTGAGCAACAATAAGATCAAGGAGGTGCGAGAGGGAGCCTT
TGATGGAGCAGCCGGCGTGCAGGAGCTGATGCTGACAGGGAACCAGCTGGAGACTGTGCATGGG
CGCACGTTCCGCGGACTCAGTGGCCTTAAGACCCTGATGCTGAGGAGCAACGAGATCAGCTGTG
TGAACAACGACACCTTCGCTGGCCTGAGCTCTGTGAGGCTACTTTCCCTCTACGACAATCGGAT
CACCACCATCACCCCTGGAGCCTTCACCACGCTGGTCTCCCTGTCCACCATCAACCTACTGTCC
AACCCCTTCAACTGCAACTGCCACCTGGCCTGGCTGGGCAAGTGGCTGCGGAAGAGGCGCATCG
TCAGCGGGAACCCCCGGTGCCAGAAGCCCTTCTTCCTGAAGGAGATCCCCATCCAGGACGTGGC
CAGCCAGGACTTCACCTGCGACGGCAACGACGAGAGCAGCTGCCAGCTGAGCCCGCGCTGTCCA
GAGCAGTGCACCTGCGTGGACACAGTGGTGCGGTGCAGCAACAAGGGCCTCCGCGCCCTCCCGA
AGGGCATGCCCAAGGACGTGACTGAGCTGTACCTGGAAGGAAATCACTTAACAGCTGTACCCAG
AGAGCTGTCTGCGCTCCGACACCTGACACTTATTGACCTGAGCAACAACAGCATCGGCGTCCTG
ACCAATTACACCTTCAGCAACATGTCTCACCTCTCGACTCTGATCCTGAGCTACAACCGGCTGA
GATGCATCCCTATCCATGCCTTCAACGGGCTGCGGTCTCTCCGTGTGCTAACTCTTCATGGCAA
TGACATTTCCAGCGTTCCTGAAGGCTCCTTCAATGATCTGACATCTCTTTCCCACCTGGCACTG
GGAACCAACCCGCTCCACTGTGACTGCAGTCTGCGTTGGTTGTCGGAGTGGGTGAAGGCAGGGT
ACAAGGAGCCTGGCATTGCCCGCTGCAGTAGCCCTGAGTCCATGGCCGACAGACTGCTGCTCAC
CACTCCCACCCACAGGTTCCAGTGCAAAGGTCCTGTGGACATCAACATTGCGGCCAAGTGCAAT
GCTTGCCTCTCGAGTCCGTGCAAGAACAATGGGACGTGCACTGCAGACCCCGTGGAGCAGTACC
GCTGCGCCTGCCCCTACAGCTACAAGGGCAAGGACTGCACTGTGCCCATCAACACCTGCATCCA
GAACCCCTGTCAGCACGGAGGCACCTGCCACCTGAGTGAGAGCCACAAGGATGGGTTCAGCTGC
TCCTGCCCCCTGGGCTTTGAGGGGCAGCGGTGTGAAATCAACCCAGATGACTGCGAGGACAATG
ACTGTGAAAACAATGCTACTTGTGTGGATGGGATCAACAACTACGTGTGTGTGTGCCCACCTAA
CTACACAGGTGAGCTGTGTGATGAGGTGATTGACCACTGCGTGCCTGAGGTGAACCTCTGTCAA
CATGAGGCCAAGTGCATCTCCCTGGACAAAGGATTCAGGTGTGACTGTGTCCCTGGCTACAGCG
GGAAGCTCTGCGAGACAGACAAGGATGACTGCGTGACTCACAAGTGCCGCCATGGGGCCCAGTG
TGTGGACGCGGTCAATGGCTACACGTGCATCTGCCCCCAGGGCTTCAGTGGGGTCTTCTGCGAG
CACCCCCCACCCATGGTCCTGCTGCAGACCAGCCCTTGTGACCAGTACGAGTGCCAGAACGGGG
CACAGTGCATCGTGGTGCAGCAGGAACCCACCTGCCGCTGCCCCCCGGGCTTCGCCGGCCCCAG
GTGCGAGAAGCTCATCACGGTCAACTTCGTGGGCAAAGACTCCTACGTGGAACTGGCCTCTGCC
AAGGTCCGGCCCCAGGCCAACATCTCCCTGCAGGTGGCCACTGACAAGGACAATGGCATCCTTC
TGTACAAGGGAGACAACGACCCCCTGGCACTGGAGCTGTACCAGGGCCATGTAAGGCTCGTCTA
CGACAGCTTGAGCTCCCCTCCAACCACAGTGTACAGTGTGGAGACAGTAAATGATGGACAATTC
CACAGTGTGGAGCTGGTGATGCTAAACCAGACCTTGAACCTGGTAGTGGATAAAGGAGCACCAA
AGAGCCTTGGGAAGCTCCAGAAGCAGCCAGCAGTCGGCATCAACAGCCCCCTCTACCTTGGAGG
TATTCCCACCTCCACGGGCCTCTCTGCATTGCGCCAGGGCACCGACCGGCCACTGGGTGGATTC
CACGGCTGCATCCATGAAGTGCGCATTAACAATGAGCTACAGGACTTCAAGGCCCTCCCGCCAC
AGTCCCTGGGGGTCTCTCCGGGCTGCAAGTCCTGCACTGTGTGCAAGCATGGCCTGTGCCGCTC
AGTTGAGAAAGACAGTGTGGTATGTGAGTGCCACCCGGGCTGGACTGGCCCGCTGTGTGACCAG
GAAGCCCGGGACCCCTGCTTCAGCCACAGCTGCAACCACGGAAAGTGTGTGGCAACCGGGAGCT
CGTATGTGTGCAAATGTGCTGAGGGCTACGGAGGAGCTTTGTGTGACCACAAGAATGATTCTGC
CCACGCGTGCTCAGCCTTCAAGTGCCACCATGGACAGTGCCACATCTCAGATCGAGGGGCGCCC
TCCTGCCTGTGCCAGCCTGGCTTTAGTGGGGAGCACTGTGAACAAGGCTACTTGGCAGTCCTCA
TGACAGAGAAGCCAGCTTCCTACAGAGTAAACAATTCAAGAGAGCAAGGAGGAAGCCACAAGAT
CTCATGTAATCTGACCATGGGAATAACTTGCATTGTTGCTCCTACATCACACTGCTTACGTGAA
TCAGTCACATTTACTGAGGAAGGGACCACAGAGGGGACCTGGCCACCAGGAGGTGGTGGTCACT
GGGAGCCACTTTACAGCCTGACACCATGTTGCCTTATAGGGTTGTTGGGAGGAGTACATGAGAT
ATAAAGTTCACGGTACCAGACACAATGCTAAGAATTTGATAGCTGAACCGTATAACTTAGATTC
ATTAAAAATCTAGGTTAAGGGGCTGGGGATTTAGCTCA

hide sequence

RefSeq Acc Id:

XM_013509153 ⟹ XP_013364607

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955408	21,727,701 - 22,322,958 (-)	NCBI

Sequence:

show sequence

GCCGCCGCCGCCGCCGCCCGGCGCGCCCTGCTCCGCCCGCGCCCCGTGCGCCTGAGCGCCGAGC
TCGCCCCTCCTCCGCGCCAACTCCGCCGCCCGTTCCCCAGGCCGCCCGCGCTCCCCGCGTGCCT
CCCGGGCTCCACGCGCCTCGCCCCGCCGAGGCAGCTCCTGAGGACGCGGGCCCCTGCACACCAT
GGCCCCCGGGCGGACAGGGGCCGGCGCCGCCGTGCGCTCTCGCCTGGCGCTGGCCTTGACGCTA
GCGAGCGTCCTGAGCGGGCCCCCAGCCGCCGCCTGCCCCACCAAGTGTACCTGCTCCGCCGCCA
GCGTGGACTGCCACGGGCTGGGCCTCCGAGCCGTTCCCCGGGGCATCCCCCGCAACGCCGAGCG
CCTTGACCTGGACAGAAATAACATCACCAGGATCACCAAGATGGACTTTGCTGGGCTCAAGAAC
CTCCGAGTCTTGCATCTGGAAGACAATCAGGTCAGCATCATTGAGAGAGGCGCCTTCCAGGATC
TGAAGCAGCTGGAGCGTTTGCGTCTGAACAAAAATAAGCTCCAGGTCCTTCCAGAAATGCTTTT
CCAGAGCACACCGAAGCTTACCAGACTAGATCTGAGTGAGAACCAGATCCAGGGGATCCCGAGG
AAGGCATTCCGTGGCATCGCTGACGTGAAGAACCTGCAACTGGACAACAACCACATCAGCTGCA
TTGAAGATGGAGCCTTCCGAGCGCTGCGCGATCTGGAGATCCTCACACTCAACAACAACAACAT
TAGCCGCATCCTGGTCACCAGCTTCAACCACATGCCGAAGATCCGGACTCTGCGCCTCCACTCC
AATCACCTGTACTGTGACTGCCACCTGGCCTGGCTCTCAGACTGGCTGCGACAGAGAAGGACAA
TCGGCCAGTTCACACTCTGCATGGCTCCTGTGCACCTAAGGGGCTTCAATGTGGCGGACGTGCA
GAAGAAAGAGTATGTGTGTCCAGGTCCCCATTCAGAGGCTCCATCCTGCAACGCCAACTCGCTC
TCATGCCCCTCCACCTGCACTTGCAGTAATAATATCGTGGACTGTCGAGGAAAAGGCTTGACCG
AAATCCCTGCCAACTTGCCAGAGAGCATCATTGAAATACGCCTAGAACAGAACTCCATCAAATC
CATCCCCGCGGGAGCCTTCACCCCGTACAAGAAACTGAAGCGAATAGACATCAGCAAGAATCAG
ATATCGGACATAGCTCCAGATGCCTTCCAGGGCCTGAAGTCTCTCACATCGCTAGTTCTCTATG
GGAACAAGATCACCGAGATTGCCAAGGGACTGTTTGATGGGCTGGTGTCCCTGCAGCTGCTCCT
CCTCAATGCCAACAAGATCAACTGCTTGCGGGTGAACACCTTCCAGGACCTACAGAACCTCAAC
TTGCTCTCCCTGTACGACAACAAGCTGCAGACCATCAGCAAGGGGCTCTTTGCCCCTCTGCAGT
CCATCCAGACGCTCCACTTAGCCCAAAACCCGTTTGTGTGCGATTGCCACTTGAAGTGGCTGGC
TGACTACCTCCAGGACAACCCCATCGAGACAAGCGGGGCCCGCTGCAGCAGCCCACGCAGGCTT
GCCAACAAGCGCATCAGCCAGATCAAGAGCAAGAAGTTCCGCTGCTCAGGCTCCGAGGACTACC
GCAGCAGGTTCAGCAGTGAGTGCTTCATGGACCTCGTGTGCCCCGAGAAGTGCCGCTGTGAGGG
CACCATTGTGGATTGCTCTAACCAGAAGCTGGCCCGCATCCCGAGCCATCTTCCAGAATATGTC
ACCGATCTGCGACTGAATGACAATGACATATCTGTCCTGGAGGCCACCAGCATCTTCAAGAAGT
TGCCCAACCTGCGGAAAATAAACCTGAGCAACAATAAGATCAAGGAGGTGCGAGAGGGAGCCTT
TGATGGAGCAGCCGGCGTGCAGGAGCTGATGCTGACAGGGAACCAGCTGGAGACTGTGCATGGG
CGCACGTTCCGCGGACTCAGTGGCCTTAAGACCCTGATGCTGAGGAGCAACGAGATCAGCTGTG
TGAACAACGACACCTTCGCTGGCCTGAGCTCTGTGAGGCTACTTTCCCTCTACGACAATCGGAT
CACCACCATCACCCCTGGAGCCTTCACCACGCTGGTCTCCCTGTCCACCATCAACCTACTGTCC
AACCCCTTCAACTGCAACTGCCACCTGGCCTGGCTGGGCAAGTGGCTGCGGAAGAGGCGCATCG
TCAGCGGGAACCCCCGGTGCCAGAAGCCCTTCTTCCTGAAGGAGATCCCCATCCAGGACGTGGC
CAGCCAGGACTTCACCTGCGACGGCAACGACGAGAGCAGCTGCCAGCTGAGCCCGCGCTGTCCA
GAGCAGTGCACCTGCGTGGACACAGTGGTGCGGTGCAGCAACAAGGGCCTCCGCGCCCTCCCGA
AGGGCATGCCCAAGGACGTGACTGAGCTGTACCTGGAAGGAAATCACTTAACAGCTGTACCCAG
AGAGCTGTCTGCGCTCCGACACCTGACACTTATTGACCTGAGCAACAACAGCATCGGCGTCCTG
ACCAATTACACCTTCAGCAACATGTCTCACCTCTCGACTCTGATCCTGAGCTACAACCGGCTGA
GATGCATCCCTATCCATGCCTTCAACGGGCTGCGGTCTCTCCGTGTGCTAACTCTTCATGGCAA
TGACATTTCCAGCGTTCCTGAAGGCTCCTTCAATGATCTGACATCTCTTTCCCACCTGGCACTG
GGAACCAACCCGCTCCACTGTGACTGCAGTCTGCGTTGGTTGTCGGAGTGGGTGAAGGCAGGGT
ACAAGGAGCCTGGCATTGCCCGCTGCAGTAGCCCTGAGTCCATGGCCGACAGACTGCTGCTCAC
CACTCCCACCCACAGGTTCCAGTGCAAAGGTCCTGTGGACATCAACATTGCGGCCAAGTGCAAT
GCTTGCCTCTCGAGTCCGTGCAAGAACAATGGGACGTGCACTGCAGACCCCGTGGAGCAGTACC
GCTGCGCCTGCCCCTACAGCTACAAGGGCAAGGACTGCACTGTGCCCATCAACACCTGCATCCA
GAACCCCTGTCAGCACGGAGGCACCTGCCACCTGAGTGAGAGCCACAAGGATGGGTTCAGCTGC
TCCTGCCCCCTGGGCTTTGAGGGGCAGCGGTGTGAAATCAACCCAGATGACTGCGAGGACAATG
ACTGTGAAAACAATGCTACTTGTGTGGATGGGATCAACAACTACGTGTGTGTGTGCCCACCTAA
CTACACAGGTGAGCTGTGTGATGAGGTGATTGACCACTGCGTGCCTGAGGTGAACCTCTGTCAA
CATGAGGCCAAGTGCATCTCCCTGGACAAAGGATTCAGGTGTGACTGTGTCCCTGGCTACAGCG
GGAAGCTCTGCGAGACAGACAAGGATGACTGCGTGACTCACAAGTGCCGCCATGGGGCCCAGTG
TGTGGACGCGGTCAATGGCTACACGTGCATCTGCCCCCAGGGCTTCAGTGGGGTCTTCTGCGAG
CACCCCCCACCCATGGTCCTGCTGCAGACCAGCCCTTGTGACCAGTACGAGTGCCAGAACGGGG
CACAGTGCATCGTGGTGCAGCAGGAACCCACCTGCCGCTGCCCCCCGGGCTTCGCCGGCCCCAG
GTGCGAGAAGCTCATCACGGTCAACTTCGTGGGCAAAGACTCCTACGTGGAACTGGCCTCTGCC
AAGGTCCGGCCCCAGGCCAACATCTCCCTGCAGGTGGCCACTGACAAGGACAATGGCATCCTTC
TGTACAAGGGAGACAACGACCCCCTGGCACTGGAGCTGTACCAGGGCCATGTAAGGCTCGTCTA
CGACAGCTTGAGCTCCCCTCCAACCACAGTGTACAGTGTGGAGACAGTAAATGATGGACAATTC
CACAGTGTGGAGCTGGTGATGCTAAACCAGACCTTGAACCTGGTAGTGGATAAAGGAGCACCAA
AGAGCCTTGGGAAGCTCCAGAAGCAGCCAGCAGTCGGCATCAACAGCCCCCTCTACCTTGGAGG
TATTCCCACCTCCACGGGCCTCTCTGCATTGCGCCAGGGCACCGACCGGCCACTGGGTGGATTC
CACGGCTGCATCCATGAAGTGCGCATTAACAATGAGCTACAGGACTTCAAGGCCCTCCCGCCAC
AGTCCCTGGGGGTCTCTCCGGGCTGCAAGTCCTGCACTGTGTGCAAGCATGGCCTGTGCCGCTC
AGTTGAGAAAGACAGTGTGGTATGTGAGTGCCACCCGGGCTGGACTGGCCCGCTGTGTGACCAG
GAAGCCCGGGACCCCTGCTTCAGCCACAGCTGCAACCACGGAAAGTGTGTGGCAACCGGGAGCT
CGTATGTGTGCAAATGTGCTGAGGGCTACGGAGGAGCTTTGTGTGACCACAAGAATGATTCTGC
CCACGCGTGCTCAGCCTTCAAGTGCCACCATGGACAGTGCCACATCTCAGATCGAGGGGCGCCC
TCCTGCCTGTGCCAGCCTGGCTTTAGTGGGGAGCACTGTGAACAAGAAAATTGAAGAGGATGGA
ACACACCCAAGTCATTCTACAACACCAGCACTTCCCTGAGACTGACAGAGAAGCAACAAAAAAA
GAGAAAGAGAAAGGCCAGTATCCCCAATAAACATAGATGCAAAACCCTCAACAAAATAAAAGCA
ACCCAAATTCAGTAGGACATGGAAAAGGTCAAAAATACAATCAAGTAGGATTCATCCCAGATAT
ACAAGGATGGTCAAGGCAAATCAATAAATGTGATCCATCACATTAACAAAAGGACAAAACTGTA
CCATCATTTCAATAGATGCAGAAAACCTGTCTGATAAAATTCAACATCACTTCATTATAAAAAC
TCTCAGAAATGTAGTTATGGAAAACAGGTACTCTGACACAGTAGAAGCATTGTATGACAAACCC
ACAGCTAACACCATACAGAAAGGAGAAATGTTGAGAACTTTTCCTCTAAGATCTGGAGGATGCC
CACTTTCATTGCTGCTGTTTGACGTAGTACAAAAAATCACAGCTAGAGCAATCAGGCAAGAGAA
AGAAAACACATACAAAT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005376361	(Get FASTA)	NCBI Sequence Viewer
	XP_013364599	(Get FASTA)	NCBI Sequence Viewer
	XP_013364607	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000022598
	ENSCLAP00000022598.1

RefSeq Acc Id:	XP_005376361 ⟸ XM_005376304
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2W3L5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAPGRTGAGAAVRSRLALALTLASVLSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAE RLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPEML FQSTPKLTRLDLSENQIQGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNN ISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFNVADV QKKEYVCPGPHSEAPSCNANSLSCPSTCTCSNNIVDCRGKGLTEIPANLPESIIEIRLEQNSIK SIPAGAFTPYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLL LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWL ADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCE GTIVDCSNQKLARIPSHLPEYVTDLRLNDNDISVLEATSIFKKLPNLRKINLSNNKIKEVREGA FDGAAGVQELMLTGNQLETVHGRTFRGLSGLKTLMLRSNEISCVNNDTFAGLSSVRLLSLYDNR ITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDV ASQDFTCDGNDESSCQLSPRCPEQCTCVDTVVRCSNKGLRALPKGMPKDVTELYLEGNHLTAVP RELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFNGLRSLRVLTLHG NDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPESMADRLLL TTPTHRFQCKGPVDINIAAKCNACLSSPCKNNGTCTADPVEQYRCACPYSYKGKDCTVPINTCI QNPCQHGGTCHLSESHKDGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGINNYVCVCPP NYTGELCDEVIDHCVPEVNLCQHEAKCISLDKGFRCDCVPGYSGKLCETDKDDCVTHKCRHGAQ CVDAVNGYTCICPQGFSGVFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFAGP RCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGDNDPLALELYQGHVRLV YDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVGINSPLYLG GIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCR SVEKDSVVCECHPGWTGPLCDQEARDPCFSHSCNHGKCVATGSSYVCKCAEGYGGALCDHKNDS AHACSAFKCHHGQCHISDRGAPSCLCQPGFSGEHCEQENPCLGEVVREAIHRQKGYTSCATASK VPMMECRGGCGPQCCQPIRSKRRKYVFQCTDGSSFVEEVERHLECGCRPCS hide sequence

RefSeq Acc Id:

XP_013364607 ⟸ XM_013509153

- Peptide Label:

isoform X3

- Sequence:

show sequence

MAPGRTGAGAAVRSRLALALTLASVLSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAE
RLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPEML
FQSTPKLTRLDLSENQIQGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNN
ISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFNVADV
QKKEYVCPGPHSEAPSCNANSLSCPSTCTCSNNIVDCRGKGLTEIPANLPESIIEIRLEQNSIK
SIPAGAFTPYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLL
LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWL
ADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCE
GTIVDCSNQKLARIPSHLPEYVTDLRLNDNDISVLEATSIFKKLPNLRKINLSNNKIKEVREGA
FDGAAGVQELMLTGNQLETVHGRTFRGLSGLKTLMLRSNEISCVNNDTFAGLSSVRLLSLYDNR
ITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDV
ASQDFTCDGNDESSCQLSPRCPEQCTCVDTVVRCSNKGLRALPKGMPKDVTELYLEGNHLTAVP
RELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFNGLRSLRVLTLHG
NDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPESMADRLLL
TTPTHRFQCKGPVDINIAAKCNACLSSPCKNNGTCTADPVEQYRCACPYSYKGKDCTVPINTCI
QNPCQHGGTCHLSESHKDGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGINNYVCVCPP
NYTGELCDEVIDHCVPEVNLCQHEAKCISLDKGFRCDCVPGYSGKLCETDKDDCVTHKCRHGAQ
CVDAVNGYTCICPQGFSGVFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFAGP
RCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGDNDPLALELYQGHVRLV
YDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVGINSPLYLG
GIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCR
SVEKDSVVCECHPGWTGPLCDQEARDPCFSHSCNHGKCVATGSSYVCKCAEGYGGALCDHKNDS
AHACSAFKCHHGQCHISDRGAPSCLCQPGFSGEHCEQEN

hide sequence

RefSeq Acc Id:

XP_013364599 ⟸ XM_013509145

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAPGRTGAGAAVRSRLALALTLASVLSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAE
RLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPEML
FQSTPKLTRLDLSENQIQGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNN
ISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFNVADV
QKKEYVCPGPHSEAPSCNANSLSCPSTCTCSNNIVDCRGKGLTEIPANLPESIIEIRLEQNSIK
SIPAGAFTPYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLL
LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWL
ADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCE
GTIVDCSNQKLARIPSHLPEYVTDLRLNDNDISVLEATSIFKKLPNLRKINLSNNKIKEVREGA
FDGAAGVQELMLTGNQLETVHGRTFRGLSGLKTLMLRSNEISCVNNDTFAGLSSVRLLSLYDNR
ITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDV
ASQDFTCDGNDESSCQLSPRCPEQCTCVDTVVRCSNKGLRALPKGMPKDVTELYLEGNHLTAVP
RELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFNGLRSLRVLTLHG
NDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPESMADRLLL
TTPTHRFQCKGPVDINIAAKCNACLSSPCKNNGTCTADPVEQYRCACPYSYKGKDCTVPINTCI
QNPCQHGGTCHLSESHKDGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGINNYVCVCPP
NYTGELCDEVIDHCVPEVNLCQHEAKCISLDKGFRCDCVPGYSGKLCETDKDDCVTHKCRHGAQ
CVDAVNGYTCICPQGFSGVFCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFAGP
RCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGDNDPLALELYQGHVRLV
YDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVGINSPLYLG
GIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCR
SVEKDSVVCECHPGWTGPLCDQEARDPCFSHSCNHGKCVATGSSYVCKCAEGYGGALCDHKNDS
AHACSAFKCHHGQCHISDRGAPSCLCQPGFSGEHCEQGYLAVLMTEKPASYRVNNSREQGGSHK
ISCNLTMGITCIVAPTSHCLRESVTFTEEGTTEGTWPPGGGGHWEPLYSLTPCCLIGLLGGVHE
I

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Ensembl Acc Id:

ENSCLAP00000022598 ⟸ ENSCLAT00000022806

Protein Domains

CTCK EGF-like Laminin G

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000015496	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000022806	ENTREZGENE
	ENSCLAT00000022806.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.200	UniProtKB/TrEMBL
	3.80.10.10	UniProtKB/TrEMBL
	Laminin	UniProtKB/TrEMBL
InterPro	ConA-like_dom_sf	UniProtKB/TrEMBL
	Cys-rich_flank_reg_C	UniProtKB/TrEMBL
	Cys_knot_C	UniProtKB/TrEMBL
	EGF-like_Ca-bd_dom	UniProtKB/TrEMBL
	EGF-like_CS	UniProtKB/TrEMBL
	EGF-like_dom	UniProtKB/TrEMBL
	EGF-type_Asp/Asn_hydroxyl_site	UniProtKB/TrEMBL
	EGF_Ca-bd_CS	UniProtKB/TrEMBL
	Growth_fac_rcpt_cys_sf	UniProtKB/TrEMBL
	Laminin_G	UniProtKB/TrEMBL
	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
	Notch/Slit_guidance	UniProtKB/TrEMBL
NCBI Gene	Slit3	ENTREZGENE
PANTHER	SLIT HOMOLOG	UniProtKB/TrEMBL
	SLIT HOMOLOG 3 PROTEIN	UniProtKB/TrEMBL
Pfam	EGF	UniProtKB/TrEMBL
	hEGF	UniProtKB/TrEMBL
	Laminin_G_2	UniProtKB/TrEMBL
	LRR_8	UniProtKB/TrEMBL
	LRRCT	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
PROSITE	ASX_HYDROXYL	UniProtKB/TrEMBL
	CTCK_1	UniProtKB/TrEMBL
	CTCK_2	UniProtKB/TrEMBL
	EGF_1	UniProtKB/TrEMBL
	EGF_2	UniProtKB/TrEMBL
	EGF_3	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
	LAM_G_DOMAIN	UniProtKB/TrEMBL
	LRR	UniProtKB/TrEMBL
SMART	EGF	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
	LamG	UniProtKB/TrEMBL
	LRR_BAC	UniProtKB/TrEMBL
	LRR_RI	UniProtKB/TrEMBL
	LRR_SD22	UniProtKB/TrEMBL
	LRR_TYP	UniProtKB/TrEMBL
	LRRCT	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
	SM00041	UniProtKB/TrEMBL
Superfamily-SCOP	EGF/Laminin	UniProtKB/TrEMBL
	L domain-like	UniProtKB/TrEMBL
	SSF49899	UniProtKB/TrEMBL
	SSF57184	UniProtKB/TrEMBL
UniProt	A0A8C2W3L5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-25	Slit3	slit guidance ligand 3		slit homolog 3 (Drosophila)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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