Pick1 (protein interacting with PRKCA 1)

Gene: Pick1 (protein interacting with PRKCA 1) Chinchilla lanigera

Analyze

Symbol:

Pick1

Name:

protein interacting with PRKCA 1

RGD ID:

9001641

Description:

ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cellular response to decreased oxygen levels (ortholog); cellular response to glucose starvation (ortholog); dendritic spine maintenance (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); amphetamine abuse (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	24,383,130 - 24,399,196 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	24,383,130 - 24,399,092 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenylosuccinase lyase deficiency (ISO)

amphetamine abuse (ISO)

Emery-Dreifuss muscular dystrophy (ISO)

genetic disease (ISO)

myoclonic dystonia 26 (ISO)

neurodegeneration with brain iron accumulation 2A (ISO)

substance-induced psychosis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to decreased oxygen levels (ISO)

cellular response to glucose starvation (ISO)

dendritic spine maintenance (ISO)

dendritic spine organization (ISO)

glial cell development (ISO)

long-term synaptic depression (ISO)

monoamine transport (ISO)

negative regulation of Arp2/3 complex-mediated actin nucleation (ISO)

negative regulation of gene expression (ISO)

positive regulation of receptor internalization (ISO)

protein kinase C-activating G protein-coupled receptor signaling pathway (ISO)

protein targeting (ISO)

receptor clustering (ISO)

regulation of insulin secretion (ISO)

regulation of kainate selective glutamate receptor activity (ISO)

regulation of postsynaptic neurotransmitter receptor internalization (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

dendrite (ISO)

dendritic spine (ISO)

glutamatergic synapse (ISO)

Golgi apparatus (ISO)

mitochondrion (ISO)

neuron projection (ISO)

perinuclear region of cytoplasm (ISO)

plasma membrane (ISO)

postsynaptic density (ISO)

postsynaptic early endosome (ISO)

postsynaptic endocytic zone (ISO)

postsynaptic specialization (ISO)

presynaptic membrane (ISO)

protein-containing complex (ISO)

synapse (ISO)

synaptic vesicle (ISO)

Molecular Function

actin filament binding (ISO)

Arp2/3 complex binding (ISO)

cytoskeletal protein binding (ISO)

G protein-coupled glutamate receptor binding (ISO)

G protein-coupled receptor binding (ISO)

identical protein binding (ISO)

ionotropic glutamate receptor binding (ISO)

membrane curvature sensor activity (ISO)

protein binding (ISO)

protein domain specific binding (ISO)

protein kinase C binding (ISO)

signaling receptor binding (ISO)

SNAP receptor activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

protein kinase C (PKC) signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Pick1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	24,383,130 - 24,399,196 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	24,383,130 - 24,399,092 (+)	NCBI	ChiLan1.0	ChiLan1.0

PICK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	38,057,255 - 38,075,701 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	38,056,311 - 38,075,701 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	38,453,262 - 38,471,708 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	36,783,208 - 36,801,654 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	36,777,902 - 36,796,207	NCBI
Celera	22	22,255,002 - 22,273,457 (+)	NCBI		Celera
Cytogenetic Map	22	q13.1	NCBI
HuRef	22	21,417,897 - 21,436,386 (+)	NCBI		HuRef
CHM1_1	22	38,411,992 - 38,430,442 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	38,518,878 - 38,537,327 (+)	NCBI		T2T-CHM13v2.0

Pick1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	79,113,373 - 79,133,666 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	79,113,373 - 79,133,684 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	79,229,140 - 79,249,466 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	79,229,173 - 79,249,484 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	79,059,604 - 79,079,896 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	79,057,068 - 79,076,715 (+)	NCBI		MGSCv36	mm8
Celera	15	81,348,804 - 81,369,231 (+)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	37.7	NCBI

Pick1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	112,676,890 - 112,697,275 (+)	NCBI		GRCr8
mRatBN7.2	7	110,796,623 - 110,816,850 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	110,797,117 - 110,816,848 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	112,545,653 - 112,564,970 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	114,769,189 - 114,788,506 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	114,738,549 - 114,757,866 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	120,465,472 - 120,484,824 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	120,465,130 - 120,484,840 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	120,459,118 - 120,478,470 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	117,213,299 - 117,232,651 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	117,247,528 - 117,266,879 (+)	NCBI
Celera	7	107,131,151 - 107,150,407 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

POLR2F
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	47,812,190 - 47,900,125 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	50,500,550 - 50,602,004 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	18,868,872 - 18,988,918 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	36,796,053 - 36,814,464 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	36,796,015 - 36,814,469 (+)	Ensembl	panpan1.1		panPan2

PICK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	26,595,301 - 26,614,170 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	26,595,768 - 26,613,756 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	26,550,611 - 26,569,400 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	27,387,103 - 27,406,123 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	27,387,124 - 27,406,155 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	27,107,123 - 27,126,143 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	27,418,687 - 27,437,706 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	27,595,780 - 27,614,797 (-)	NCBI		UU_Cfam_GSD_1.0

Pick1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	10,087,798 - 10,105,588 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	3,097,629 - 3,116,526 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	3,098,196 - 3,115,921 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PICK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	9,808,451 - 9,825,539 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	9,808,444 - 9,829,677 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	7,208,317 - 7,225,652 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PICK1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	20,758,199 - 20,778,210 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	20,759,960 - 20,779,514 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	104,992,571 - 105,011,487 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pick1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	9,880,670 - 9,895,230 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	9,880,773 - 9,895,270 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005379238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005379240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01014363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01014364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01135012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000022564 ⟹ ENSCLAP00000022359

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955413	24,383,130 - 24,399,196 (+)	Ensembl

RefSeq Acc Id:

XM_005379238 ⟹ XP_005379295

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955413	24,383,130 - 24,399,092 (+)	NCBI

Sequence:

show sequence

ACCGCCAGGTGGAAACGGCAGGTGGGTTCAGGTGCCAGCCTGGCCCGGGCCCGGCTCTGGGACT
GAGTCTTCCGGTCAGTGACACCGGCAGCTCCCAAGGGCCTGGAGACCCGTTGGCCAGGCTTTGG
CATCTGAGCTCATCGCCCTGGCCTGGAGTTCTCCTCCCCTGTACCTAGTAAGGATCACCTACCC
ACCTCCGCCACTCCGAGACTCCCCCTCCGCGAGTCCAGGGGAGAGGAGGAGCGACCTGCTGGGC
AGTTCCCCATTCCCCCACCGAGCTGGGCAGTTAGCCAGCCCACCCCAACTCTCGGAACCATGTT
TGCAGACTTGGACTATGACATCGAGGAGGATAAACTTGGGATCCCCACTGTGCCTGGGAAGGTG
ACCCTGCAGAAGGATGCTCAGAACCTGATCGGCATCAGCATTGGAGGGGGGGCCCAGTACTGTC
CTTGCCTCTATATTGTCCAGGTGTTCGACAACACTCCTGCTGCCTTGGATGGCACTGTGGCCGC
TGGTGACGAGATCACCGGTGTCAATGGCAAGTCAATCAAAGGGAAGACTAAGGTGGAGGTGGCG
AAGATGATTCAGGAGGTGAAGGGGGAGGTGACCATCCACTACAACAAGCTTCAGGCGGACCCCA
AGCAGGGCATGTCCCTCGACATTGTGTTGAAGAAGGTCAAGCACCGGCTGGTGGAGAACATGAG
CTCGGGCACGGCTGACGCCCTGGGCCTGAGCCGGGCTATCCTGTGCAATGATGGGCTGGTGAAG
AGGCTGGAGGAGCTGGAGCGAACAGCCGAGCTGTACAAAGGGATGACAGAACACACCAAGAACC
TCCTCCGGGCCTTTTATGAACTGTCACAGACCCACCGGGCCTTTGGGGACGTGTTCTCTGTGAT
TGGGGTGCGGGAGCCCCAGCCGGCGGCGAGTGAGGCCTTTGTGAAGTTTGCTGATGCGCACCGC
AGCATTGAGAAGTTTGGCATCCGGCTGCTGAAAACCATCAAGCCAATGCTGACAGACCTGAACA
CGTACCTCAACAAAGCCATCCCCGACACGCGGCTCACCATCAAGAAGTACCTGGACGTGAAGTT
CGAGTACCTGTCCTACTGCCTGAAGGTGAAGGAGATGGATGACGAGGAGTACAGCTGCATTGCC
CTGGGCGAGCCGCTGTACCGCGTGAGCACCGGCAACTACGAGTACCGCCTGATCCTGCGCTGCC
GCCAGGAGGCGCGCGCGCGCTTCTCGCAGATGCGCAAGGACGTGCTGGAGAAGATGGAGCTGCT
GGACCAGAAGCACGTCCAGGACATCGTGTTCCAGCTGCAGCGCTTCGTGTCCACCATGTCCAAG
TACTACAACGACTGCTACGCGGTGCTGCGCGACGCCGATGTGTTCCCCATCGAGGTGGACCTGG
CCCACACCACACTGGCCTACGGCCCCAGCCAGGGCGAGTTCACCGACGGGGAGGAGGAGGAGGA
GGACCCGGCAGCCAAAGAACCTGCCCGAGACCCGCGCGGGGCCGCCGGGCCCCTGGACAAGGGT
GGAAGCTGGTGTGACTCCTGAGCGCCCCGCCCCCAGGCCAGATCTGGGGGGTCGGGCTCAGAAA
GGCCTGCGGGCCTCCCGCTCCTCCGTCCTGCACACGGCGGGCCTGGGCTCCTGCTGGACAGCAC
CACCCCTTTCCTTCCGCCTCCCCAGCCCAGGGAGAGCGTGGCCTCCGGACCCGTCTAGAGGGAG
AGGCAGGAAGAAAGACAGCTGAAGGGGCAGAAGTCCAGGGCCGGCCCTGCGGGCGCCTCTGTGC
GCCCCTCGCCTGCCCGGGCAAGGGCCAGGTGGATGCGAGGTGGAGGCCTGCATCTCACACTGCG
CGGCGGCCCCACGCACCTCGGCAGCCTTTATTTATTTTGTTCCCTCAGCTCTGCCACTTCTGGA
GAAGGGCTGGGCTCAGGGCCTGTACTGAATAAACAAACCCAGGCGAGCCGCCGGACTCCA

hide sequence

RefSeq Acc Id:

XM_005379240 ⟹ XP_005379297

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955413	24,383,130 - 24,399,092 (+)	NCBI

Sequence:

show sequence

ACCGCCAGGTGGAAACGGCAGGTGGGTTCAGGTGCCAGCCTGGCCCGGGCCCGGCTCTGGGACT
GAGTCTTCCGGTCAGTGACACCGGCAGCTCCCAAGGGCCTGGAGACCCGTTGGCCAGGCTTTGG
CATCTGAGCTCATCGCCCTGGCCTGGAGTTCTCCTCCCCTGTACCTATTCCCCATTCCCCCACC
GAGCTGGGCAGTTAGCCAGCCCACCCCAACTCTCGGAACCATGTTTGCAGACTTGGACTATGAC
ATCGAGGAGGATAAACTTGGGATCCCCACTGTGCCTGGGAAGGTGACCCTGCAGAAGGATGCTC
AGAACCTGATCGGCATCAGCATTGGAGGGGGGGCCCAGTACTGTCCTTGCCTCTATATTGTCCA
GGTGTTCGACAACACTCCTGCTGCCTTGGATGGCACTGTGGCCGCTGGTGACGAGATCACCGGT
GTCAATGGCAAGTCAATCAAAGGGAAGACTAAGGTGGAGGTGGCGAAGATGATTCAGGAGGTGA
AGGGGGAGGTGACCATCCACTACAACAAGCTTCAGGCGGACCCCAAGCAGGGCATGTCCCTCGA
CATTGTGTTGAAGAAGGTCAAGCACCGGCTGGTGGAGAACATGAGCTCGGGCACGGCTGACGCC
CTGGGCCTGAGCCGGGCTATCCTGTGCAATGATGGGCTGGTGAAGAGGCTGGAGGAGCTGGAGC
GAACAGCCGAGCTGTACAAAGGGATGACAGAACACACCAAGAACCTCCTCCGGGCCTTTTATGA
ACTGTCACAGACCCACCGGGCCTTTGGGGACGTGTTCTCTGTGATTGGGGTGCGGGAGCCCCAG
CCGGCGGCGAGTGAGGCCTTTGTGAAGTTTGCTGATGCGCACCGCAGCATTGAGAAGTTTGGCA
TCCGGCTGCTGAAAACCATCAAGCCAATGCTGACAGACCTGAACACGTACCTCAACAAAGCCAT
CCCCGACACGCGGCTCACCATCAAGAAGTACCTGGACGTGAAGTTCGAGTACCTGTCCTACTGC
CTGAAGGTGAAGGAGATGGATGACGAGGAGTACAGCTGCATTGCCCTGGGCGAGCCGCTGTACC
GCGTGAGCACCGGCAACTACGAGTACCGCCTGATCCTGCGCTGCCGCCAGGAGGCGCGCGCGCG
CTTCTCGCAGATGCGCAAGGACGTGCTGGAGAAGATGGAGCTGCTGGACCAGAAGCACGTCCAG
GACATCGTGTTCCAGCTGCAGCGCTTCGTGTCCACCATGTCCAAGTACTACAACGACTGCTACG
CGGTGCTGCGCGACGCCGATGTGTTCCCCATCGAGGTGGACCTGGCCCACACCACACTGGCCTA
CGGCCCCAGCCAGGGCGAGTTCACCGACGGGGAGGAGGAGGAGGAGGACCCGGCAGCCAAAGAA
CCTGCCCGAGACCCGCGCGGGGCCGCCGGGCCCCTGGACAAGGGTGGAAGCTGGTGTGACTCCT
GAGCGCCCCGCCCCCAGGCCAGATCTGGGGGGTCGGGCTCAGAAAGGCCTGCGGGCCTCCCGCT
CCTCCGTCCTGCACACGGCGGGCCTGGGCTCCTGCTGGACAGCACCACCCCTTTCCTTCCGCCT
CCCCAGCCCAGGGAGAGCGTGGCCTCCGGACCCGTCTAGAGGGAGAGGCAGGAAGAAAGACAGC
TGAAGGGGCAGAAGTCCAGGGCCGGCCCTGCGGGCGCCTCTGTGCGCCCCTCGCCTGCCCGGGC
AAGGGCCAGGTGGATGCGAGGTGGAGGCCTGCATCTCACACTGCGCGGCGGCCCCACGCACCTC
GGCAGCCTTTATTTATTTTGTTCCCTCAGCTCTGCCACTTCTGGAGAAGGGCTGGGCTCAGGGC
CTGTACTGAATAAACAAACCCAGGCGAGCCGCCGGACTCCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005379295	(Get FASTA)	NCBI Sequence Viewer
	XP_005379297	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000022359
	ENSCLAP00000022359.1

RefSeq Acc Id:

XP_005379297 ⟸ XM_005379240

- UniProtKB:

A0A8C2VY43 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTV
AAGDEITGVNGKSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVEN
MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFS
VIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDV
KFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKME
LLDQKHVQDIVFQLQRFVSTMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGPSQGEFTDGEEE
EEDPAAKEPARDPRGAAGPLDKGGSWCDS

hide sequence

RefSeq Acc Id:

XP_005379295 ⟸ XM_005379238

- UniProtKB:

A0A8C2VY43 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTV
AAGDEITGVNGKSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVEN
MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFS
VIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDV
KFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKME
LLDQKHVQDIVFQLQRFVSTMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGPSQGEFTDGEEE
EEDPAAKEPARDPRGAAGPLDKGGSWCDS

hide sequence

RefSeq Acc Id:

ENSCLAP00000022359 ⟸ ENSCLAT00000022564

Protein Domains

AH PDZ

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000015336	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000022564	ENTREZGENE
	ENSCLAT00000022564.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1270.60	UniProtKB/TrEMBL
	2.30.42.10	UniProtKB/TrEMBL
InterPro	AH/BAR_dom_sf	UniProtKB/TrEMBL
	AH_dom	UniProtKB/TrEMBL
	Arfaptin_fam	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	PICK1_BAR	UniProtKB/TrEMBL
NCBI Gene	Pick1	ENTREZGENE
PANTHER	PRKCA-BINDING PROTEIN	UniProtKB/TrEMBL
	PTHR12141	UniProtKB/TrEMBL
Pfam	Arfaptin	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
PROSITE	PDZ	UniProtKB/TrEMBL
	PS50870	UniProtKB/TrEMBL
SMART	Arfaptin	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
Superfamily-SCOP	SSF103657	UniProtKB/TrEMBL
	SSF50156	UniProtKB/TrEMBL
UniProt	A0A8C2VY43	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations