Nmnat2 (nicotinamide nucleotide adenylyltransferase 2) - Rat Genome Database

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Gene: Nmnat2 (nicotinamide nucleotide adenylyltransferase 2) Chinchilla lanigera
Analyze
Symbol: Nmnat2
Name: nicotinamide nucleotide adenylyltransferase 2
RGD ID: 8946683
Description: ENCODES a protein that exhibits nicotinate-nucleotide adenylyltransferase activity (ortholog); protein ADP-ribosyltransferase-substrate adaptor activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); NAD biosynthetic process (ortholog); negative regulation of cytoplasmic translation (ortholog); PARTICIPATES IN de novo nicotinamide adenine dinucleotide biosynthetic pathway; niacin metabolic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH 1q24 Deletion Syndrome (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); late endosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540622,076,343 - 22,227,200 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540622,077,247 - 22,274,668 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Nmnat2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540622,076,343 - 22,227,200 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540622,077,247 - 22,274,668 (-)NCBIChiLan1.0ChiLan1.0
NMNAT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381183,248,237 - 183,418,380 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1183,248,237 - 183,418,380 (-)EnsemblGRCh38hg38GRCh38
GRCh371183,217,372 - 183,387,515 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361181,484,002 - 181,654,360 (-)NCBINCBI36Build 36hg18NCBI36
Build 341179,949,035 - 180,005,666NCBI
Celera1156,328,478 - 156,498,831 (-)NCBICelera
Cytogenetic Map1q25.3NCBI
HuRef1154,453,206 - 154,623,670 (-)NCBIHuRef
CHM1_11184,640,483 - 184,810,661 (-)NCBICHM1_1
T2T-CHM13v2.01182,607,574 - 182,777,689 (-)NCBIT2T-CHM13v2.0
Nmnat2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391152,830,532 - 152,995,012 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1152,830,744 - 152,995,007 (+)EnsemblGRCm39 Ensembl
GRCm381152,954,781 - 153,119,266 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1152,954,993 - 153,119,261 (+)EnsemblGRCm38mm10GRCm38
MGSCv371154,802,231 - 154,966,391 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361154,717,319 - 154,881,479 (+)NCBIMGSCv36mm8
Celera1155,375,719 - 155,540,588 (+)NCBICelera
Cytogenetic Map1G3NCBI
cM Map165.15NCBI
Nmnat2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81367,655,794 - 67,831,609 (+)NCBIGRCr8
mRatBN7.21365,105,950 - 65,277,350 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1365,105,950 - 65,278,484 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1367,707,031 - 67,881,048 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01368,994,601 - 69,169,031 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01366,245,587 - 66,420,355 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01370,379,346 - 70,559,311 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1370,379,346 - 70,559,458 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01375,346,746 - 75,525,374 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41367,969,507 - 68,142,926 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11368,067,854 - 68,144,266 (+)NCBI
Celera1365,010,279 - 65,182,390 (+)NCBICelera
Cytogenetic Map13q21NCBI
NMNAT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2166,299,343 - 66,481,720 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1165,982,821 - 66,162,542 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01158,768,949 - 158,948,711 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11162,927,610 - 163,105,750 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1162,929,609 - 163,105,524 (-)Ensemblpanpan1.1panPan2
NMNAT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1716,626,213 - 16,819,681 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl716,631,116 - 16,805,457 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha716,210,918 - 16,405,676 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0716,356,899 - 16,552,072 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl716,359,939 - 16,551,872 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1716,265,302 - 16,460,952 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0716,374,579 - 16,569,799 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0716,505,552 - 16,700,669 (-)NCBIUU_Cfam_GSD_1.0
Nmnat2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934488,596,542 - 88,739,041 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364816,443,240 - 6,582,026 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364816,443,286 - 6,585,784 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NMNAT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9124,498,109 - 124,696,194 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19124,495,464 - 124,697,911 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29136,809,812 - 136,959,638 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NMNAT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12545,954,934 - 46,130,106 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2545,954,862 - 46,125,378 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605547,172,546 - 47,347,868 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nmnat2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462481410,293,074 - 10,466,691 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462481410,288,746 - 10,470,476 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000018332   ⟹   ENSCLAP00000018153
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540622,076,343 - 22,227,200 (-)Ensembl
RefSeq Acc Id: XM_005375030   ⟹   XP_005375087
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540622,077,247 - 22,272,090 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005375031   ⟹   XP_005375088
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540622,077,247 - 22,272,376 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005375032   ⟹   XP_005375089
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540622,077,247 - 22,272,102 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005375033   ⟹   XP_005375090
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540622,077,247 - 22,272,427 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005375034   ⟹   XP_005375091
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540622,077,247 - 22,274,668 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005375035   ⟹   XP_005375092
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540622,077,247 - 22,273,156 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013521523   ⟹   XP_013376977
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540622,077,247 - 22,272,090 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_005375091   ⟸   XM_005375034
- UniProtKB: A0A8C2VSE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005375092   ⟸   XM_005375035
- UniProtKB: A0A8C2VSE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005375090   ⟸   XM_005375033
- UniProtKB: A0A8C2VSE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005375088   ⟸   XM_005375031
- UniProtKB: A0A8C2VSE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005375089   ⟸   XM_005375032
- UniProtKB: A0A8C2VSE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005375087   ⟸   XM_005375030
- UniProtKB: A0A8C2VSE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013376977   ⟸   XM_013521523
- UniProtKB: A0A8C2VSE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000018153   ⟸   ENSCLAT00000018332
Protein Domains
Cytidyltransferase-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000012452 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000018332 ENTREZGENE
  ENSCLAT00000018332.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.620 UniProtKB/TrEMBL
InterPro Cyt_trans-like UniProtKB/TrEMBL
  NMNAT_euk UniProtKB/TrEMBL
  Rossmann-like_a/b/a_fold UniProtKB/TrEMBL
NCBI Gene Nmnat2 ENTREZGENE
PANTHER NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE UniProtKB/TrEMBL
  NICOTINAMIDE/NICOTINIC ACID MONONUCLEOTIDE ADENYLYLTRANSFERASE 2 UniProtKB/TrEMBL
Pfam CTP_transf_like UniProtKB/TrEMBL
Superfamily-SCOP Nucleotidylyl transferase UniProtKB/TrEMBL
UniProt A0A8C2VSE1 ENTREZGENE, UniProtKB/TrEMBL