Fgfr4 (fibroblast growth factor receptor 4) - Rat Genome Database

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Gene: Fgfr4 (fibroblast growth factor receptor 4) Chinchilla lanigera
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Symbol: Fgfr4
Name: fibroblast growth factor receptor 4
RGD ID: 8849227
Description: ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor-activated receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adult respiratory distress syndrome (ortholog); Breast Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,370,468 - 29,383,971 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,370,480 - 29,383,531 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Fgfr4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,370,468 - 29,383,971 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,370,480 - 29,383,531 (+)NCBIChiLan1.0ChiLan1.0
FGFR4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5177,086,905 - 177,098,144 (+)EnsemblGRCh38hg38GRCh38
GRCh385177,086,915 - 177,098,144 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh375176,513,916 - 176,525,145 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365176,446,527 - 176,457,733 (+)NCBINCBI36hg18NCBI36
Build 345176,446,526 - 176,457,730NCBI
Celera5171,976,184 - 171,987,401 (-)NCBI
Cytogenetic Map5q35.2NCBI
HuRef5171,435,609 - 171,446,679 (+)NCBIHuRef
CHM1_15175,946,705 - 175,957,908 (+)NCBICHM1_1
Fgfr4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,300,631 - 55,316,572 (+)NCBIGRCm39mm39
GRCm39 Ensembl1355,300,453 - 55,316,572 (+)Ensembl
GRCm381355,152,818 - 55,168,759 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,152,640 - 55,168,759 (+)EnsemblGRCm38mm10GRCm38
MGSCv371355,254,179 - 55,270,120 (+)NCBIGRCm37mm9NCBIm37
MGSCv361355,162,497 - 55,178,362 (+)NCBImm8
Celera1356,213,486 - 56,229,296 (+)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1329.8NCBI
Fgfr4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2179,461,541 - 9,476,268 (-)NCBI
Rnor_6.0 Ensembl179,990,078 - 10,004,321 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0179,990,072 - 10,004,339 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01712,099,383 - 12,113,637 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41715,512,144 - 15,527,348 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11715,512,146 - 15,523,432 (-)NCBI
Celera179,540,006 - 9,554,750 (-)NCBICelera
Cytogenetic Map17p14NCBI
FGFR4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15179,454,995 - 179,466,114 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5179,454,995 - 179,467,605 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05172,386,443 - 172,400,271 (+)NCBIMhudiblu_PPA_v0panPan3
FGFR4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1436,243,689 - 36,254,636 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl436,244,220 - 36,252,035 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha436,209,722 - 36,220,671 (-)NCBI
ROS_Cfam_1.0436,607,886 - 36,618,835 (-)NCBI
UMICH_Zoey_3.1436,434,871 - 36,445,815 (-)NCBI
UNSW_CanFamBas_1.0436,622,022 - 36,632,969 (-)NCBI
UU_Cfam_GSD_1.0437,130,265 - 37,141,210 (-)NCBI
Fgfr4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213122,360,727 - 122,372,869 (+)NCBI
SpeTri2.0NW_0049365971,388,394 - 1,397,731 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGFR4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl280,841,536 - 80,853,796 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1280,841,536 - 80,853,791 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2282,414,997 - 82,427,239 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FGFR4
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12379,095,031 - 79,106,018 (+)NCBI
ChlSab1.1 Ensembl2379,097,429 - 79,105,456 (+)Ensembl
Vero_WHO_p1.0NW_02366607510,259,717 - 10,291,447 (+)NCBI
Fgfr4
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473312,964,893 - 12,979,198 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000022047   ⟹   ENSCLAP00000021843
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540829,370,468 - 29,383,971 (+)Ensembl
RefSeq Acc Id: XM_005376410   ⟹   XP_005376467
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540829,374,299 - 29,383,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005376412   ⟹   XP_005376469
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540829,370,480 - 29,383,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005376413   ⟹   XP_005376470
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540829,370,638 - 29,383,531 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005376414   ⟹   XP_005376471
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540829,370,480 - 29,383,531 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005376467 (Get FASTA)   NCBI Sequence Viewer  
  XP_005376469 (Get FASTA)   NCBI Sequence Viewer  
  XP_005376470 (Get FASTA)   NCBI Sequence Viewer  
  XP_005376471 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005376469   ⟸   XM_005376412
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005376471   ⟸   XM_005376414
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005376470   ⟸   XM_005376413
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005376467   ⟸   XM_005376410
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000021843   ⟸   ENSCLAT00000022047


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014961 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000021843 ENTREZGENE
Ensembl Transcript ENSCLAT00000022047 ENTREZGENE
NCBI Gene Fgfr4 ENTREZGENE