Adam10 (ADAM metallopeptidase domain 10) - Rat Genome Database

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Gene: Adam10 (ADAM metallopeptidase domain 10) Chinchilla lanigera
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Symbol: Adam10
Name: ADAM metallopeptidase domain 10
RGD ID: 8827330
Description: ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metalloendopeptidase activity involved in amyloid precursor protein catabolic process (ortholog); INVOLVED IN adherens junction organization (ortholog); amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 18 (ortholog); Bloom syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: disintegrin and metalloproteinase domain-containing protein 10
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545015,853,366 - 15,928,200 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545015,853,372 - 15,927,966 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Adam10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545015,853,366 - 15,928,200 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545015,853,372 - 15,927,966 (+)NCBIChiLan1.0ChiLan1.0
ADAM10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1558,588,809 - 58,749,791 (-)EnsemblGRCh38hg38GRCh38
GRCh381558,588,809 - 58,749,707 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371558,881,008 - 59,041,906 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361556,675,802 - 56,829,469 (-)NCBINCBI36hg18NCBI36
Build 341556,676,368 - 56,829,469NCBI
Celera1535,776,749 - 35,930,110 (-)NCBI
Cytogenetic Map15q21.3NCBI
HuRef1535,711,409 - 35,864,717 (-)NCBIHuRef
CHM1_11559,006,506 - 59,160,121 (-)NCBICHM1_1
Adam10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39970,586,133 - 70,687,511 (+)NCBIGRCm39mm39
GRCm39 Ensembl970,586,279 - 70,687,511 (+)Ensembl
GRCm38970,678,944 - 70,780,229 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl970,678,997 - 70,780,229 (+)EnsemblGRCm38mm10GRCm38
MGSCv37970,526,808 - 70,628,036 (+)NCBIGRCm37mm9NCBIm37
MGSCv36970,478,343 - 70,577,515 (+)NCBImm8
Celera967,896,038 - 67,997,081 (+)NCBICelera
Cytogenetic Map9DNCBI
cM Map939.53NCBI
Adam10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2871,346,008 - 71,477,889 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl871,345,837 - 71,477,889 (+)Ensembl
Rnor_6.0877,107,355 - 77,237,483 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl877,107,536 - 77,237,483 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0875,842,118 - 75,974,564 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4875,200,657 - 75,289,572 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1875,307,687 - 75,310,191 (+)NCBI
Celera870,259,195 - 70,383,316 (-)NCBICelera
Cytogenetic Map8q24NCBI
ADAM10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11555,873,796 - 56,027,188 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1555,873,606 - 56,027,188 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01537,562,930 - 37,717,175 (-)NCBIMhudiblu_PPA_v0panPan3
ADAM10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13023,605,724 - 23,732,038 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3023,606,517 - 23,731,823 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3023,577,513 - 23,704,721 (-)NCBI
ROS_Cfam_1.03023,770,904 - 23,899,036 (-)NCBI
UMICH_Zoey_3.13023,696,156 - 23,822,891 (-)NCBI
UNSW_CanFamBas_1.03023,781,555 - 23,908,752 (-)NCBI
UU_Cfam_GSD_1.03023,923,628 - 24,051,939 (-)NCBI
Adam10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640101,911,860 - 102,063,696 (-)NCBI
SpeTri2.0NW_00493647119,760,709 - 19,911,759 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADAM10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1113,289,197 - 113,413,569 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11113,289,480 - 113,407,940 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21125,476,146 - 125,527,319 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADAM10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12624,768,827 - 24,921,169 (+)NCBI
ChlSab1.1 Ensembl2624,768,915 - 24,919,009 (+)Ensembl
Vero_WHO_p1.0NW_023666048116,399,555 - 116,551,303 (-)NCBI
Adam10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478113,195,390 - 13,321,823 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000012109   ⟹   ENSCLAP00000011968
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545015,853,366 - 15,928,200 (+)Ensembl
RefSeq Acc Id: XM_013518929   ⟹   XP_013374383
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545015,853,372 - 15,927,966 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013374383 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013374383   ⟸   XM_013518929
- Sequence:
RefSeq Acc Id: ENSCLAP00000011968   ⟸   ENSCLAT00000012109


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008259 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000011968 ENTREZGENE
Ensembl Transcript ENSCLAT00000012109 ENTREZGENE
NCBI Gene Adam10 ENTREZGENE