Il1rl1 (interleukin 1 receptor like 1) - Rat Genome Database

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Gene: Il1rl1 (interleukin 1 receptor like 1) Chinchilla lanigera
Analyze
Symbol: Il1rl1
Name: interleukin 1 receptor like 1
RGD ID: 8920577
Description: ENCODES a protein that exhibits interleukin-33 binding (ortholog); interleukin-33 receptor activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to peptide (ortholog); inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); external side of plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin 1 receptor-like 1; interleukin-1 receptor-like 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554707,779,828 - 7,849,157 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Il1rl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554707,779,828 - 7,849,157 (+)NCBIChiLan1.0ChiLan1.0
IL1RL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382102,311,563 - 102,352,356 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2102,311,502 - 102,352,037 (+)EnsemblGRCh38hg38GRCh38
GRCh372102,928,023 - 102,968,497 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362102,294,394 - 102,334,929 (+)NCBINCBI36Build 36hg18NCBI36
Build 342102,412,234 - 102,419,698NCBI
Celera297,129,200 - 97,169,642 (+)NCBICelera
Cytogenetic Map2q12.1NCBI
HuRef296,692,020 - 96,732,452 (+)NCBIHuRef
CHM1_12102,932,225 - 102,972,834 (+)NCBICHM1_1
T2T-CHM13v2.02102,769,811 - 102,810,635 (+)NCBIT2T-CHM13v2.0
Il1rl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39140,444,105 - 40,504,575 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl140,468,730 - 40,504,575 (+)EnsemblGRCm39 Ensembl
GRCm38140,404,864 - 40,465,418 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl140,429,570 - 40,465,415 (+)EnsemblGRCm38mm10GRCm38
MGSCv37140,496,494 - 40,522,260 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36140,384,308 - 40,409,958 (+)NCBIMGSCv36mm8
Celera140,251,783 - 40,277,425 (+)NCBICelera
Cytogenetic Map1BNCBI
cM Map119.19NCBI
Il1rl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8950,157,326 - 50,222,888 (+)NCBIGRCr8
mRatBN7.2942,661,694 - 42,727,266 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl942,697,192 - 42,727,256 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx951,179,169 - 51,227,104 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0956,301,859 - 56,349,792 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0954,577,363 - 54,625,421 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0947,133,483 - 47,184,316 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl947,134,034 - 47,182,170 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0946,818,236 - 46,866,589 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4939,577,879 - 39,624,781 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1939,610,600 - 39,618,735 (+)NCBI
Celera940,421,404 - 40,468,339 (+)NCBICelera
RH 3.4 Map9420.09RGD
Cytogenetic Map9q22NCBI
IL1RL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21225,353,603 - 25,368,702 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A25,356,789 - 25,371,496 (-)NCBINHGRI_mPanPan1
IL1RL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11040,658,191 - 40,732,097 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1040,659,041 - 40,677,357 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1040,584,086 - 40,603,254 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01041,524,636 - 41,543,860 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1041,481,796 - 41,559,352 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11041,239,090 - 41,258,271 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01041,520,373 - 41,539,587 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01041,712,710 - 41,731,892 (-)NCBIUU_Cfam_GSD_1.0
Il1rl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629290,097,610 - 90,128,649 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367131,021,044 - 1,035,039 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367131,020,969 - 1,035,012 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL1RL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl351,846,792 - 51,951,383 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1351,868,549 - 51,902,454 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2354,483,076 - 54,567,410 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL1RL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1145,966,551 - 6,020,391 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl146,005,061 - 6,020,265 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041173,687,571 - 173,703,287 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il1rl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247496,795,748 - 6,873,701 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247496,795,822 - 6,873,068 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005400767   ⟹   XP_005400824
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,817,793 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005400768   ⟹   XP_005400825
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,832,109 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522847   ⟹   XP_013378301
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,779,828 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522848   ⟹   XP_013378302
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,779,828 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522849   ⟹   XP_013378303
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,788,166 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522850   ⟹   XP_013378304
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,788,020 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522851   ⟹   XP_013378305
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,813,871 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522852   ⟹   XP_013378306
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,788,504 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522853   ⟹   XP_013378307
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,783,886 - 7,849,157 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013522854   ⟹   XP_013378308
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554707,779,832 - 7,839,311 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_005400824   ⟸   XM_005400767
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005400825   ⟸   XM_005400768
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013378302   ⟸   XM_013522848
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013378301   ⟸   XM_013522847
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013378308   ⟸   XM_013522854
- Peptide Label: isoform X2
- UniProtKB: A0A8C2YKN8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013378307   ⟸   XM_013522853
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013378304   ⟸   XM_013522850
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013378303   ⟸   XM_013522849
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013378306   ⟸   XM_013522852
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013378305   ⟸   XM_013522851
- Peptide Label: isoform X1
- Sequence:
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000004065 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000005835 ENTREZGENE
  ENSCLAT00000005835.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  IL-1_rcpt_fam UniProtKB/TrEMBL
  IL-1_rcpt_I/II-typ UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
NCBI Gene Il1rl1 ENTREZGENE
PANTHER INTERLEUKIN-1 RECEPTOR-LIKE 1 UniProtKB/TrEMBL
  PTHR11890 UniProtKB/TrEMBL
Pfam Ig_3 UniProtKB/TrEMBL
  PF00047 UniProtKB/TrEMBL
PRINTS INTRLKN1R12F UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A8C2YKN8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Il1rl1  interleukin 1 receptor like 1    interleukin 1 receptor-like 1  Symbol and/or name change 5135510 APPROVED