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Gene: Vsig4 (V-set and immunoglobulin domain containing 4) Chinchilla lanigera

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Symbol:

Vsig4

Name:

V-set and immunoglobulin domain containing 4

RGD ID:

8847161

Description:

ENCODES a protein that exhibits complement component C3b binding (ortholog); INVOLVED IN negative regulation of complement activation, alternative pathway (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of T cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal hemophilia A (ortholog); FOUND IN protein-containing complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

V-set and immunoglobulin domain-containing protein 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955475	5,461,064 - 5,481,564 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955475	5,461,512 - 5,481,552 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

autistic disorder (ISO)

autosomal hemophilia A (ISO)

COVID-19 (ISO)

factor VIII deficiency (ISO)

hepatocellular carcinoma (ISO)

IgA glomerulonephritis (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of complement activation, alternative pathway (ISO)

negative regulation of interleukin-2 production (ISO)

negative regulation of T cell proliferation (ISO)

positive regulation of gene expression (ISO)

Cellular Component

protein-containing complex (ISO)

Molecular Function

complement component C3b binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Vsig4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955475	5,461,064 - 5,481,564 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955475	5,461,512 - 5,481,552 (-)	NCBI	ChiLan1.0	ChiLan1.0

VSIG4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	66,021,738 - 66,040,080 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	66,021,738 - 66,040,125 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	65,241,580 - 65,259,922 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	65,158,305 - 65,176,692 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	65,024,600 - 65,042,906	NCBI
Celera	X	65,588,725 - 65,607,111 (-)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI
HuRef	X	59,068,686 - 59,087,663 (-)	NCBI		HuRef
CHM1_1	X	65,134,610 - 65,152,555 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	64,448,234 - 64,467,291 (-)	NCBI		T2T-CHM13v2.0

Vsig4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	95,290,807 - 95,337,044 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	95,290,809 - 95,337,044 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	96,247,201 - 96,293,438 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	96,247,203 - 96,293,438 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	93,442,542 - 93,488,777 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	92,449,922 - 92,496,157 (-)	NCBI		MGSCv36	mm8
Celera	X	83,251,817 - 83,298,808 (-)	NCBI		Celera
Cytogenetic Map	X	C3	NCBI
cM Map	X	42.69	NCBI

Vsig4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	65,154,422 - 65,179,708 (-)	NCBI		GRCr8
mRatBN7.2	X	61,144,926 - 61,170,212 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	61,144,928 - 61,170,212 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	62,618,577 - 62,643,869 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	66,119,103 - 66,144,391 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	63,676,350 - 63,701,634 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	65,370,851 - 65,400,298 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	65,370,851 - 65,400,298 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	66,208,997 - 66,234,590 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	83,872,092 - 83,898,242 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	61,557,850 - 61,582,973 (-)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

VSIG4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	65,546,150 - 65,563,779 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	65,549,755 - 65,567,384 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	55,137,938 - 55,155,569 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	65,211,313 - 65,228,888 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	65,211,313 - 65,229,332 (-)	Ensembl	panpan1.1		panPan2

VSIG4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	50,839,979 - 50,881,684 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	50,803,330 - 50,881,618 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	41,659,551 - 41,719,546 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	51,785,928 - 51,845,934 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	51,806,749 - 51,845,903 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	49,750,420 - 49,810,399 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	51,098,349 - 51,158,343 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	51,013,686 - 51,073,693 (-)	NCBI		UU_Cfam_GSD_1.0

Vsig4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	51,402,029 - 51,426,149 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936635	2,167,617 - 2,191,740 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936635	2,167,633 - 2,191,725 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

VSIG4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	52,175,607 - 52,198,566 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	52,175,601 - 52,198,635 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	58,745,331 - 58,775,852 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

VSIG4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	55,963,007 - 55,982,929 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	55,962,866 - 55,981,287 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666083	3,291,053 - 3,309,343 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Vsig4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624898	1,268,886 - 1,289,180 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624898	1,268,998 - 1,288,756 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013502886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013502887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013502888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01054919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01030376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000004737 ⟹ ENSCLAP00000004651

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955475	5,461,064 - 5,481,564 (-)	Ensembl

RefSeq Acc Id:

XM_013502886 ⟹ XP_013358340

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955475	5,461,512 - 5,481,552 (-)	NCBI

Sequence:

show sequence

TAGGAGTTCCAGTGAGAGACTTAGGGAAGGAAGAGAAGTGAGCAGACACAAACACTGACAGCCA
CTAGGAGTTAAAATCTCCTAGGCAGCAGTAAGCTGGAAGAAAGGACAGAAGTGCCTCTGGCCAT
AATGGGGATTTTACTGGACCTGCTGCTTCTGAGCCACCTAGCAGTGATCACCTGTGGCCACCCC
ATCCTGGAAGCACCAGAGAACATAACAGGACCCTGGAAAGGGGATGTGAATATTCCTTGTACCT
ATGGTCCCCTAAAAGGTTATACCCAAGTCATGGTGAGGTGGTTGGTACAACGTGATTCAGAACC
AGTCACCATCTTCCAACGTGACTCCTCTGGAGACCATATCCAGCAAGCGAAATACCGAGGTCGC
CTGCATCTGAGCCAGAATATTCCAGGGGTTGTATCTCTCCAACTGAATACCTTGGAGATGGATG
ACAGAAGCCACTACACCTGTGAAGTCACCTGGCAGACCCCTGATAGCAAACAAGTGATGAGAGA
CAAGATCATTGAGCTCCGTGTCCAGAAACTCCCTGTCTCAAAGCCCACAGTGACCACTGGCAGT
GGTTATGGTTTCACTGTGCCCCAGGGAATGAGAATTAGCCTTCAATGCCAGGCTTGGGGTTCTC
CCCCCATCAGTTATGCCTGGTACAAGGAACAAACTAATGACCAGGAACCCATTAAAGTAGCAGC
CTTGAGTACTTTACTCTTCAAGCCTGCAGTGGTGGCCAACTCAGGCTCCTATTTTTGTACTGCC
AAGGGCCGTGTTGGCGCTGAACAACGGAGCAACGCTGTAAAGTTTGTAGTCAAAGAGCCGCTTG
ACATGAAGAATGAAGCACCTACAATCACAAAATCCCCATTGGAAGCAACATCTACAGTAAACCA
ATCCTGGGACCAAACTTCTAAAGCGGATGTCTACTTTGGGGAAACCATCAGTGAGCCAGGAAAA
GCAAGGGGCTTGCCTATGTTTGCCATCATCCTCATCACCTCCTTGTGCTGTATAGTTGTCCTCA
CCATGGCTTATGTCATGCTCTGCCGGAAGACAACTCAACAGGAACATGTCTATGAAGTCAACAG
CATAGATGCCAGAGAGGCCAGCAACTCTGGAGAAACCATGATGGTAGCCATCTCCCCATTTGGC
TGGGCCAACAGCAAGCAAGCTTCCCCGACGGTGGGCAACGACTAGTGTGATGAACTCTTCCTGG
GCCAGAAGTACCAGATCATCACCCAGATCAACAGTGACTATGCCTGCCTGCTGCAAACAGTACC
CTTGGATAATGAGCTTCTGGCCACTGAGAGCAAGAGTGTTATTAAAATGTTCCACTGGGTCAAG
TTCTGTTAAAATAATTATCTATTCAGTTCCTGTCTTTTGCATGACCTCCTTCCTTGCTAATTCT
CTTCCTGAATAGCCCAAAGTGTCTGCCCTGCCAATGTTCGGCACGCTAGGAGTGAATTTCCCCT
GAAGCAAGCCAGCGGCTGGGTTTTGTCCTTGGTCTTTCTGGTGTCTCCACCTGAGCCTTCCACT
GTTCTTTCTCCAACTCCAGAGAAGTGTTCACAGCACTAAGGTTTGTTCATCAGACCTCTAGGTA
CTGCCAGAAGATCAGAGGGGGCTAAACTCCGCCAGCTCAAGAAACCAACTATGTGCGGGATCAC
TTCTCTTTCTCTAGGGCCAGACTACTTTTATCTGAGACTGTTATGTTACAAGTCAGGGTTTTGT
TCTGCCCTGGACTATGAATCTAGTGCTCTGGTATTCTTTCAGTGCTCAATAAATAGCTCATCAT
GATAGCAA

hide sequence

RefSeq Acc Id:

XM_013502887 ⟹ XP_013358341

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955475	5,461,512 - 5,481,552 (-)	NCBI

Sequence:

show sequence

TAGGAGTTCCAGTGAGAGACTTAGGGAAGGAAGAGAAGTGAGCAGACACAAACACTGACAGCCA
CTAGGAGTTAAAATCTCCTAGGCAGCAGTAAGCTGGAAGAAAGGACAGAAGTGCCTCTGGCCAT
AATGGGGATTTTACTGGACCTGCTGCTTCTGAGCCACCTAGCAGTGATCACCTGTGGCCACCCC
ATCCTGGAAGCACCAGAGAACATAACAGGACCCTGGAAAGGGGATGTGAATATTCCTTGTACCT
ATGGTCCCCTAAAAGGTTATACCCAAGTCATGGTGAGGTGGTTGGTACAACGTGATTCAGAACC
AGTCACCATCTTCCAACGTGACTCCTCTGGAGACCATATCCAGCAAGCGAAATACCGAGGTCGC
CTGCATCTGAGCCAGAATATTCCAGGGGTTGTATCTCTCCAACTGAATACCTTGGAGATGGATG
ACAGAAGCCACTACACCTGTGAAGTCACCTGGCAGACCCCTGATAGCAAACAAGTGATGAGAGA
CAAGATCATTGAGCTCCGTGTCCAGAAACTCCCTGTCTCAAAGCCCACAGTGACCACTGGCAGT
GGTTATGGTTTCACTGTGCCCCAGGGAATGAGAATTAGCCTTCAATGCCAGGCTTGGGGTTCTC
CCCCCATCAGTTATGCCTGGTACAAGGAACAAACTAATGACCAGGAACCCATTAAAGTAGCAGC
CTTGAGTACTTTACTCTTCAAGCCTGCAGTGGTGGCCAACTCAGGCTCCTATTTTTGTACTGCC
AAGGGCCGTGTTGGCGCTGAACAACGGAGCAACGCTGTAAAGTTTGTAGTCAAAGAGCCGCTTG
ACATGAAGAATGAAGCACCTACAATCACAAAATCCCCATTGGAAGCAACATCTACAGTAAACCA
ATCCTGGGACCAAACTTCTAAAGCGGATGTCTACTTTGGGGAAACCATCAGTGAGCCAGGAAAA
GCAAGGGGCTTGCCTATGTTTGCCATCATCCTCATCACCTCCTTGTGCTGTATAGTTGTCCTCA
CCATGGCTTATGTCATGCTCTGCCGGAAGACAACTCAACAGGAACATGTCTATGAAGTCAACAG
CCCAAAGTGTCTGCCCTGCCAATGTTCGGCACGCTAGGAGTGAATTTCCCCTGAAGCAAGCCAG
CGGCTGGGTTTTGTCCTTGGTCTTTCTGGTGTCTCCACCTGAGCCTTCCACTGTTCTTTCTCCA
ACTCCAGAGAAGTGTTCACAGCACTAAGGTTTGTTCATCAGACCTCTAGGTACTGCCAGAAGAT
CAGAGGGGGCTAAACTCCGCCAGCTCAAGAAACCAACTATGTGCGGGATCACTTCTCTTTCTCT
AGGGCCAGACTACTTTTATCTGAGACTGTTATGTTACAAGTCAGGGTTTTGTTCTGCCCTGGAC
TATGAATCTAGTGCTCTGGTATTCTTTCAGTGCTCAATAAATAGCTCATCATGATAGCAA

hide sequence

RefSeq Acc Id:

XM_013502888 ⟹ XP_013358342

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955475	5,462,209 - 5,481,552 (-)	NCBI

Sequence:

show sequence

TAGGAGTTCCAGTGAGAGACTTAGGGAAGGAAGAGAAGTGAGCAGACACAAACACTGACAGCCA
CTAGGAGTTAAAATCTCCTAGGCAGCAGTAAGCTGGAAGAAAGGACAGAAGTGCCTCTGGCCAT
AATGGGGATTTTACTGGACCTGCTGCTTCTGAGCCACCTAGCAGTGATCACCTGTGGCCACCCC
ATCCTGGAAGCACCAGAGAACATAACAGGACCCTGGAAAGGGGATGTGAATATTCCTTGTACCT
ATGGTCCCCTAAAAGGTTATACCCAAGTCATGGTGAGGTGGTTGGTACAACGTGATTCAGAACC
AGTCACCATCTTCCAACGTGACTCCTCTGGAGACCATATCCAGCAAGCGAAATACCGAGGTCGC
CTGCATCTGAGCCAGAATATTCCAGGGGTTGTATCTCTCCAACTGAATACCTTGGAGATGGATG
ACAGAAGCCACTACACCTGTGAAGTCACCTGGCAGACCCCTGATAGCAAACAAGTGATGAGAGA
CAAGATCATTGAGCTCCGTGTCCAGAAACTCCCTGTCTCAAAGCCCACAGTGACCACTGGCAGT
GGTTATGGTTTCACTGTGCCCCAGGGAATGAGAATTAGCCTTCAATGCCAGGCTTGGGGTTCTC
CCCCCATCAGTTATGCCTGGTACAAGGAACAAACTAATGACCAGGAACCCATTAAAGTAGCAGC
CTTGAGTACTTTACTCTTCAAGCCTGCAGTGGTGGCCAACTCAGGCTCCTATTTTTGTACTGCC
AAGGGCCGTGTTGGCGCTGAACAACGGAGCAACGCTGTAAAGTTTGTAGTCAAAGAGCCGCTTG
ACATGAAGAATGAAGCACCTACAATCACAAAATCCCCATTGGAAGCAACATCTACAGTAAACCA
ATCCTGGGACCAAACTTCTAAAGCGGATGTCTACTTTGGGGAAACCATCAGTGAGCCAGGAAAA
GCAAGGGGCTTGCCTATGTTTGCCATCATCCTCATCACCTCCTTGTGCTGTATAGTTGTCCTCA
CCATGGCTTATGTCATGCTCTGCCGGAAGACAACTCAACAGGAACATGTCTATGAAGTCAACAG
AATGTGGCCTCTTGGGCAATAGCATAGATGCCAGAGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013358340	(Get FASTA)	NCBI Sequence Viewer
	XP_013358341	(Get FASTA)	NCBI Sequence Viewer
	XP_013358342	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000004651
	ENSCLAP00000004651.1

RefSeq Acc Id:

XP_013358341 ⟸ XM_013502887

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGILLDLLLLSHLAVITCGHPILEAPENITGPWKGDVNIPCTYGPLKGYTQVMVRWLVQRDSEP
VTIFQRDSSGDHIQQAKYRGRLHLSQNIPGVVSLQLNTLEMDDRSHYTCEVTWQTPDSKQVMRD
KIIELRVQKLPVSKPTVTTGSGYGFTVPQGMRISLQCQAWGSPPISYAWYKEQTNDQEPIKVAA
LSTLLFKPAVVANSGSYFCTAKGRVGAEQRSNAVKFVVKEPLDMKNEAPTITKSPLEATSTVNQ
SWDQTSKADVYFGETISEPGKARGLPMFAIILITSLCCIVVLTMAYVMLCRKTTQQEHVYEVNS
PKCLPCQCSAR

hide sequence

RefSeq Acc Id:	XP_013358340 ⟸ XM_013502886
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UR78 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGILLDLLLLSHLAVITCGHPILEAPENITGPWKGDVNIPCTYGPLKGYTQVMVRWLVQRDSEP VTIFQRDSSGDHIQQAKYRGRLHLSQNIPGVVSLQLNTLEMDDRSHYTCEVTWQTPDSKQVMRD KIIELRVQKLPVSKPTVTTGSGYGFTVPQGMRISLQCQAWGSPPISYAWYKEQTNDQEPIKVAA LSTLLFKPAVVANSGSYFCTAKGRVGAEQRSNAVKFVVKEPLDMKNEAPTITKSPLEATSTVNQ SWDQTSKADVYFGETISEPGKARGLPMFAIILITSLCCIVVLTMAYVMLCRKTTQQEHVYEVNS IDAREASNSGETMMVAISPFGWANSKQASPTVGND hide sequence

RefSeq Acc Id:

XP_013358342 ⟸ XM_013502888

- Peptide Label:

isoform X3

- Sequence:

show sequence

MGILLDLLLLSHLAVITCGHPILEAPENITGPWKGDVNIPCTYGPLKGYTQVMVRWLVQRDSEP
VTIFQRDSSGDHIQQAKYRGRLHLSQNIPGVVSLQLNTLEMDDRSHYTCEVTWQTPDSKQVMRD
KIIELRVQKLPVSKPTVTTGSGYGFTVPQGMRISLQCQAWGSPPISYAWYKEQTNDQEPIKVAA
LSTLLFKPAVVANSGSYFCTAKGRVGAEQRSNAVKFVVKEPLDMKNEAPTITKSPLEATSTVNQ
SWDQTSKADVYFGETISEPGKARGLPMFAIILITSLCCIVVLTMAYVMLCRKTTQQEHVYEVNR
MWPLGQ

hide sequence

Ensembl Acc Id:

ENSCLAP00000004651 ⟸ ENSCLAT00000004737

Protein Domains

Ig-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003308	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004737	ENTREZGENE
	ENSCLAT00000004737.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_sub2	UniProtKB/TrEMBL
	Ig_V-set	UniProtKB/TrEMBL
	VSIG4	UniProtKB/TrEMBL
	VSIG4_IgV	UniProtKB/TrEMBL
NCBI Gene	Vsig4	ENTREZGENE
PANTHER	PTHR15466	UniProtKB/TrEMBL
	V-SET AND IMMUNOGLOBULIN DOMAIN-CONTAINING PROTEIN 4	UniProtKB/TrEMBL
Pfam	Ig_2	UniProtKB/TrEMBL
	V-set	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
SMART	IGc2	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A8C2UR78	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD