Aurka (aurora kinase A) - Rat Genome Database

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Gene: Aurka (aurora kinase A) Chinchilla lanigera
Analyze
Symbol: Aurka
Name: aurora kinase A
RGD ID: 8726211
Description: ENCODES a protein that exhibits histone H3S10 kinase activity (ortholog); molecular function activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); apoptotic process (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Neoplasms (ortholog); Chromosomal Instability (ortholog); FOUND IN axon hillock (ortholog); basolateral plasma membrane (ortholog); centrosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554452,831,157 - 2,853,357 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554452,831,073 - 2,853,151 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Aurka
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554452,831,157 - 2,853,357 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554452,831,073 - 2,853,151 (+)NCBIChiLan1.0ChiLan1.0
AURKA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382056,369,390 - 56,392,215 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2056,369,389 - 56,392,337 (-)EnsemblGRCh38hg38GRCh38
GRCh372054,944,446 - 54,967,271 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362054,377,852 - 54,400,758 (-)NCBINCBI36Build 36hg18NCBI36
Celera2051,683,792 - 51,707,784 (-)NCBICelera
Cytogenetic Map20q13.2NCBI
HuRef2051,729,262 - 51,752,229 (-)NCBIHuRef
CHM1_12054,845,539 - 54,868,444 (-)NCBICHM1_1
T2T-CHM13v2.02058,146,836 - 58,169,709 (-)NCBIT2T-CHM13v2.0
Aurka
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392172,198,116 - 172,212,825 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2172,198,110 - 172,212,455 (-)EnsemblGRCm39 Ensembl
GRCm382172,356,190 - 172,370,886 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2172,356,190 - 172,370,535 (-)EnsemblGRCm38mm10GRCm38
MGSCv372172,181,696 - 172,196,006 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362172,047,401 - 172,061,711 (-)NCBIMGSCv36mm8
Celera2178,315,373 - 178,329,688 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map294.84NCBI
Aurka
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83181,546,742 - 181,562,890 (-)NCBIGRCr8
mRatBN7.23161,128,309 - 161,144,524 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3161,128,313 - 161,144,390 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3164,937,768 - 164,951,932 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03173,436,787 - 173,450,951 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03171,178,603 - 171,192,767 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03170,364,177 - 170,380,278 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3170,364,181 - 170,378,210 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03176,437,310 - 176,456,036 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43163,270,479 - 163,284,506 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13163,177,671 - 163,190,537 (-)NCBI
Celera3160,328,562 - 160,342,589 (-)NCBICelera
Cytogenetic Map3q42NCBI
AURKA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22162,116,577 - 62,139,405 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12062,109,695 - 62,132,523 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02052,707,757 - 52,730,579 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12053,994,880 - 54,017,381 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2053,994,881 - 54,017,339 (-)Ensemblpanpan1.1panPan2
AURKA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12441,585,483 - 41,604,875 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2441,585,518 - 41,604,791 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2440,833,209 - 40,852,906 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02442,296,241 - 42,316,154 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2442,296,229 - 42,315,779 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12441,536,239 - 41,555,929 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02441,675,064 - 41,694,968 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02442,333,178 - 42,352,923 (-)NCBIUU_Cfam_GSD_1.0
Aurka
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640183,775,540 - 183,790,540 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936875295,238 - 310,457 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AURKA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11756,954,838 - 56,972,435 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21764,066,378 - 64,083,673 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AURKA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.127,730,060 - 7,753,167 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl27,734,128 - 7,752,395 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605055,804,778 - 55,827,848 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aurka
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624790147,149 - 161,344 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624790143,818 - 162,065 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000013916   ⟹   ENSCLAP00000013761
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554452,831,157 - 2,853,357 (+)Ensembl
RefSeq Acc Id: XM_005392275   ⟹   XP_005392332
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554452,831,073 - 2,853,151 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013518333   ⟹   XP_013373787
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554452,831,124 - 2,853,151 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005392332 (Get FASTA)   NCBI Sequence Viewer  
  XP_013373787 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000013761
  ENSCLAP00000013761.1
RefSeq Acc Id: XP_005392332   ⟸   XM_005392275
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VIE4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013373787   ⟸   XM_013518333
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSCLAP00000013761   ⟸   ENSCLAT00000013916
Protein Domains
Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000009511 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000013916 ENTREZGENE
  ENSCLAT00000013916.1 UniProtKB/TrEMBL
Gene3D-CATH Phosphorylase Kinase, domain 1 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Aur UniProtKB/TrEMBL
  AURKA UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene Aurka ENTREZGENE
PANTHER PTHR24350 UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A8C2VIE4 ENTREZGENE, UniProtKB/TrEMBL