Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:hindbrain development
go back to main search page
Accession:GO:0030902 term browser browse the term
Definition:The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium).
Synonyms:exact_synonym: rhombencephalon development



show annotations for term's descendants           Sort by:
 
hindbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:F8W3V6 (MGI:5306539|PMID:21959375)
UniProt
RGD
PMID:21959375 GO_REF:0000024 MGI:5306539 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:2180721 (MGI:3578600|PMID:15872003) RGD PMID:15872003 MGI:3578600 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:1931800|PMID:11262227)
Ensembl
RGD
PMID:11262227 GO_REF:0000107 MGI:1931800 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:95390 (MGI:3525936|PMID:15607945) RGD PMID:15607945 MGI:3525936 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G En2 engrailed homeobox 2 acts_upstream_of_or_within ISO MGI:95389 (MGI:3525936|PMID:15607945) RGD PMID:15607945 MGI:3525936 NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3578572|PMID:15829521), (MGI:3624192|PMID:16651541) RGD PMID:15829521 PMID:16651541 MGI:3578572 MGI:3624192 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857164|MGI:1857509|MGI:98297 (MGI:3512837|PMID:15496441), (MGI:77851|PMID:8575294) RGD PMID:8575294 PMID:15496441 MGI:3512837 MGI:77851 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO MGI:2176174|MGI:2670936 (MGI:3578600|PMID:15872003) RGD PMID:15872003 MGI:3578600 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:3056069 (MGI:3055618|PMID:15367676) RGD PMID:15367676 MGI:3055618 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
JBrowse link
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:2148229 (MGI:3613103|PMID:16368089) RGD PMID:16368089 MGI:3613103 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Neurog3 neurogenin 3 IEP RGD PMID:9130143 RGD:633362 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262
JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within ISO MGI:3530139 (MGI:3528545|PMID:15632069) RGD PMID:15632069 MGI:3528545 NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Pax6 paired box 6 IDA
IMP
RGD PMID:11880342 PMID:20082710 RGD:729590, RGD:8552345 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISS
ISO
GO_REF:0000024
(MGI:1859633|PMID:11318877)
HGNC
RGD
PMID:11318877 GO_REF:0000024 MGI:1859633 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:9749725 RGD:9831452 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1934268|MGI:2387802|MGI:95728 (MGI:3051930|PMID:15183722), (MGI:3512837|PMID:15496441)
UniProt
RGD
PMID:15183722 PMID:15496441 GO_REF:0000024 MGI:3051930 MGI:3512837 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smad1 SMAD family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2157982 (MGI:3581106|PMID:15899870)
Ensembl
RGD
PMID:15899870 GO_REF:0000107 MGI:3581106 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
JBrowse link
G Smad9 SMAD family member 9 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3581766 (MGI:3581106|PMID:15899870)
GO_REF:0000107
RGD
Ensembl
PMID:15899870 GO_REF:0000107 MGI:3581106 NCBI chr 2:138,956,326...139,006,315
Ensembl chr 2:138,986,471...139,006,307
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2176173|MGI:3605892 (MGI:3611670|PMID:16330018) RGD PMID:16330018 MGI:3611670 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO MGI:2179766 (MGI:3619285|PMID:16540585) RGD PMID:16540585 MGI:3619285 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEP RGD PMID:11231055 RGD:2302116 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISO (MGI:4834980|PMID:20614471) RGD PMID:20614471 MGI:4834980 NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO MGI:3720850 (MGI:5007596|PMID:21533046) RGD PMID:21533046 MGI:5007596 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347476|MGI:2176222|MGI:2177337 (MGI:3767119|PMID:17922007) RGD PMID:17922007 MGI:3767119 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:1857743 (MGI:1339230|PMID:10357893) RGD PMID:10357893 MGI:1339230 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Nog noggin involved_in ISO
IEA
(PMID:8582276)
GO_REF:0000107
RGD
Ensembl
PMID:8582276 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:1926861 (MGI:3767119|PMID:17922007) RGD PMID:17922007 MGI:3767119 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within ISO UniProtKB:Q02576 (MGI:3723363|PMID:17573818) RGD PMID:17573818 MGI:3723363 NCBI chr 2:189,444,287...189,449,625
Ensembl chr 2:189,442,711...189,449,625
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3512302 (MGI:84546|PMID:8955272)
Ensembl
RGD
PMID:8955272 GO_REF:0000107 MGI:84546 NCBI chr15:81,255,566...81,260,057
Ensembl chr15:81,257,781...81,259,728
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1889152|PMID:10970885) RGD PMID:10970885 MGI:1889152 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 IMP RGD PMID:18635264 RGD:5129699 NCBI chr 1:76,948,622...76,959,826 JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:19682991 RGD:6903898 NCBI chr  X:112,119,673...112,124,060
Ensembl chr  X:112,120,228...112,124,057
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:1889058|PMID:8855328) RGD PMID:8855328 MGI:1889058 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO
ISS
(PMID:24766809), (PMID:24766810)
(MGI:5568133|PMID:24766809)
GO_REF:0000024
RGD
UniProt
PMID:24766809 PMID:24766810 GO_REF:0000024 MGI:5568133 NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421
JBrowse link
G Dixdc1 DIX domain containing 1 IMP RGD PMID:19339625 RGD:2308917 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:2661097 (MGI:4833736|PMID:20798045) RGD PMID:20798045 MGI:4833736 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
G Nav2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) RGD PMID:21419114 MGI:5050602 NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3621523|PMID:16504944)
UniProt
RGD
PMID:16504944 GO_REF:0000024 MGI:3621523 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Ogdh oxoglutarate dehydrogenase acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:1340775|PMID:10407039) RGD PMID:10407039 MGI:1340775 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99511 (MGI:5545830|PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 MGI:5545830 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within ISO MGI:1346866|MGI:4868451 (MGI:5545830|PMID:24431450) RGD PMID:24431450 MGI:5545830 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (MGI:3624180|PMID:16571625) RGD PMID:16571625 MGI:3624180 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:2446434|MGI:3664541|MGI:95727 (MGI:3624180|PMID:16571625) RGD PMID:16571625 MGI:3624180 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (MGI:4438783|PMID:20096683) RGD PMID:20096683 MGI:4438783 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
JBrowse link
G Rfx4 regulatory factor X4 acts_upstream_of_or_within ISO (MGI:2669568|PMID:12925582) RGD PMID:12925582 MGI:2669568 NCBI chr 7:18,853,065...19,015,378
Ensembl chr 7:18,853,322...19,014,967
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176173|MGI:2176256 (MGI:3624180|PMID:16571625)
Ensembl
RGD
PMID:16571625 GO_REF:0000107 MGI:3624180 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Trnp1 TMF1-regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) RGD PMID:23622239 MGI:5490679 NCBI chr 5:145,706,427...145,713,279
Ensembl chr 5:145,706,094...145,713,272
JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (MGI:5532214|PMID:23861879) RGD PMID:23861879 MGI:5532214 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5295128|PMID:21957071)
UniProt
Ensembl
RGD
PMID:21957071 GO_REF:0000024 GO_REF:0000107 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) RGD PMID:10096022 MGI:2178952 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4831137 (MGI:4830814|PMID:20153830)
RGD PMID:20153830 PMID:21873635 MGI:4830814, RGD:13792537 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387774 (MGI:3709698|PMID:17409116)
Ensembl
RGD
PMID:17409116 GO_REF:0000107 MGI:3709698 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61625 (MGI:4839424|PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q9R171 (MGI:4839424|PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (MGI:3769586|PMID:17984326) RGD PMID:17984326 MGI:3769586 NCBI chr 1:194,689,962...194,738,353
Ensembl chr 1:194,690,135...194,738,362
JBrowse link
G Mtpn myotrophin IEP RGD PMID:8144589 RGD:632797 NCBI chr 4:64,159,273...64,186,686
Ensembl chr 4:64,157,641...64,186,724
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (MGI:5436217|PMID:21800304) RGD PMID:21800304 MGI:5436217 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61625|UniProtKB:Q9R171 (MGI:4839424|PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) RGD PMID:27160703 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:1351063|PMID:10624947) RGD PMID:10624947 MGI:1351063 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (MGI:1195230|PMID:9405095) RGD PMID:9405095 MGI:1195230 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5689090|PMID:22095825)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22095825 GO_REF:0000024 GO_REF:0000107 MGI:5689090 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3624192|PMID:16651541) RGD PMID:16651541 MGI:3624192 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Psmg1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO MGI:4820730 (MGI:4819897|PMID:20498273) RGD PMID:20498273 MGI:4819897 NCBI chr11:35,276,080...35,285,591
Ensembl chr11:35,276,011...35,285,622
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (MGI:5582020|PMID:24466353) RGD PMID:24466353 MGI:5582020 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO UniProtKB:Q62226 (MGI:2683830|PMID:14687547) RGD PMID:14687547 MGI:2683830 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA
GO_REF:0000024
UniProtKB:P51448 (MGI:2683830|PMID:14687547), (MGI:5689090|PMID:22095825)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14687547 PMID:22095825 GO_REF:0000024 GO_REF:0000107 MGI:2683830 MGI:5689090 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Zfp423 zinc finger protein 423 acts_upstream_of_or_within ISO (MGI:5805574|PMID:27727273) RGD PMID:27727273 MGI:5805574 NCBI chr19:19,111,538...19,407,371
Ensembl chr19:19,110,238...19,407,373
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within ISO MGI:3793763|MGI:3793765 (MGI:3793563|PMID:18327254) RGD PMID:18327254 MGI:3793563 NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (MGI:70349|PMID:7697385) RGD PMID:7697385 MGI:70349 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5504540|PMID:23688253)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23688253 GO_REF:0000024 GO_REF:0000107 MGI:5504540 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp365 zinc finger protein 365 involved_in ISS
ISO
GO_REF:0000024
(MGI:5559035|PMID:23912123)
UniProt
RGD
PMID:23912123 GO_REF:0000024 MGI:5559035 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (MGI:5703669|PMID:26609159) RGD PMID:26609159 MGI:5703669 NCBI chr 1:259,897,659...259,901,501
Ensembl chr 1:259,897,939...259,898,730
JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (MGI:5703669|PMID:26609159) RGD PMID:26609159 MGI:5703669 NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856466 (MGI:71790|PMID:2473662) RGD PMID:2473662 MGI:71790 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO MGI:3505741 (MGI:3510013|PMID:10973246) RGD PMID:10973246 MGI:3510013 NCBI chr12:34,754,132...34,851,175
Ensembl chr12:34,754,137...34,851,479
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (MGI:1347769|PMID:10630211), (MGI:62667|PMID:1306163), (MGI:68980|PMID:7834360) RGD PMID:1306163 PMID:7834360 PMID:10630211 MGI:1347769 MGI:62667 MGI:68980 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4831137 (MGI:4830814|PMID:20153830)
RGD PMID:20153830 PMID:21873635 MGI:4830814, RGD:13792537 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5295128|PMID:21957071)
UniProt
Ensembl
RGD
PMID:21957071 GO_REF:0000024 GO_REF:0000107 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO MGI:3778383 (MGI:5306536|PMID:22133810) RGD PMID:22133810 MGI:5306536 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (MGI:4461108|PMID:20041218) RGD PMID:20041218 MGI:4461108 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:107792 (MGI:3718715|PMID:17664423)
UniProt
RGD
PMID:17664423 GO_REF:0000024 MGI:3718715 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:3521746 (MGI:3512714|PMID:15345707) RGD PMID:15345707 MGI:3512714 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Rora RAR-related orphan receptor A acts_upstream_of_or_within ISO MGI:1857035 (MGI:86446|PMID:8996814) RGD PMID:8996814 MGI:86446 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (MGI:5300220|PMID:21937600), (MGI:5565016|PMID:24491816) RGD PMID:21937600 PMID:24491816 MGI:5300220 MGI:5565016 NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6358090 (MGI:5921109|PMID:28934388) RGD PMID:28934388 MGI:5921109 NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314
JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2137515|MGI:2152544|MGI:2179048|MGI:5587034 (MGI:6152587|PMID:29615573) RGD PMID:29615573 MGI:6152587 NCBI chr 3:50,861,367...50,935,782
Ensembl chr 3:50,861,367...50,935,903
JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO MGI:1918244 (MGI:6269036|PMID:30420556) RGD PMID:30420556 MGI:6269036 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761
JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within ISO MGI:3618596 (MGI:3640843|PMID:16906134) RGD PMID:16906134 MGI:3640843 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (MGI:3630371|PMID:16625205), (MGI:4829568|PMID:20577052) RGD PMID:16625205 PMID:20577052 MGI:3630371 MGI:4829568 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO MGI:3849305 (MGI:3849110|PMID:19265195) RGD PMID:19265195 MGI:3849110 NCBI chr 5:131,412,541...131,422,573
Ensembl chr 5:131,412,541...131,421,013
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (MGI:62667|PMID:1306163) RGD PMID:1306163 MGI:62667 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295128|PMID:21957071)
UniProt
RGD
PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4437543|PMID:19816510) RGD PMID:19816510 MGI:4437543 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Klhl1 kelch-like family member 1 acts_upstream_of_or_within ISO MGI:3664534|MGI:3664543 (MGI:3664006|PMID:17005861) RGD PMID:17005861 MGI:3664006 NCBI chr15:72,698,188...73,142,707
Ensembl chr15:72,699,094...73,142,594
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:3664765 (MGI:3656460|PMID:16481398) RGD PMID:16481398 MGI:3656460 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:3769195|PMID:17712420) RGD PMID:17712420 MGI:3769195 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (MGI:5436217|PMID:21800304) RGD PMID:21800304 MGI:5436217 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Sez6 seizure related 6 homolog acts_upstream_of_or_within ISO MGI:1935121|MGI:2385295 (MGI:3654399|PMID:16814779) RGD PMID:16814779 MGI:3654399 NCBI chr10:62,818,931...62,868,686
Ensembl chr10:62,819,069...62,868,671
JBrowse link
G Sez6l seizure related 6 homolog like acts_upstream_of_or_within ISO MGI:104745|MGI:2385295 (MGI:3654399|PMID:16814779) RGD PMID:16814779 MGI:3654399 NCBI chr12:44,064,628...44,221,815
Ensembl chr12:44,064,935...44,219,663
JBrowse link
G Sez6l2 seizure related 6 homolog like 2 acts_upstream_of_or_within ISO MGI:104745|MGI:1935121 (MGI:3654399|PMID:16814779) RGD PMID:16814779 MGI:3654399 NCBI chr 1:181,557,109...181,577,456
Ensembl chr 1:181,557,109...181,577,456
JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta acts_upstream_of_or_within ISO (MGI:3762988|PMID:17954912) RGD PMID:17954912 MGI:3762988 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Whrn whirlin involved_in IEA
ISO
GO_REF:0000107
(MGI:5516521|PMID:24011083)
Ensembl
RGD
PMID:24011083 GO_REF:0000107 MGI:5516521 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 acts_upstream_of_or_within ISO MGI:2671790 (MGI:4454933|PMID:20502676) RGD PMID:20502676 MGI:4454933 NCBI chr 8:45,057,617...45,082,224
Ensembl chr 8:45,057,619...45,082,247
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (MGI:5582020|PMID:24466353) RGD PMID:24466353 MGI:5582020 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:3709537|PMID:17409239) RGD PMID:17409239 MGI:3709537 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:6477849|PMID:32675284) RGD PMID:32675284 MGI:6477849 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Coq8b coenzyme Q8B involved_in ISS
ISO
GO_REF:0000024
(PMID:27499294)
UniProt
RGD
PMID:27499294 GO_REF:0000024 NCBI chr 1:82,525,578...82,549,182
Ensembl chr 1:82,526,568...82,549,180
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 acts_upstream_of_or_within ISO MGI:4127354 (MGI:4438955|PMID:20231455) RGD PMID:20231455 MGI:4438955 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5504540|PMID:23688253)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23688253 GO_REF:0000024 GO_REF:0000107 MGI:5504540 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:107792 (MGI:3718715|PMID:17664423)
UniProt
RGD
PMID:17664423 GO_REF:0000024 MGI:3718715 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IEP RGD PMID:7182074 RGD:10047093 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
JBrowse link
G Aif1 allograft inflammatory factor 1 IEP RGD PMID:9698327 RGD:704401 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Ak1 adenylate kinase 1 IEP RGD PMID:9920788 RGD:632499 NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041
JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:9920788 RGD:632499 NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 IEP RGD PMID:12843293 RGD:1299593 NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEP RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:3664103 (MGI:3654591|PMID:16880690) RGD PMID:16880690 MGI:3654591 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Atrn attractin acts_upstream_of_or_within ISO MGI:1856082 (MGI:3771742|PMID:18064672) RGD PMID:18064672 MGI:3771742 NCBI chr 3:118,110,320...118,244,326
Ensembl chr 3:118,110,229...118,244,322
JBrowse link
G Ccr1 C-C motif chemokine receptor 1 IEP RGD PMID:12541321 RGD:5688179 NCBI chr 8:123,556,286...123,561,841 JBrowse link
G Cd3e CD3e molecule involved_in ISO (MGI:3718938|PMID:17502348) RGD PMID:17502348 MGI:3718938 NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:1931637|PMID:11226314) RGD PMID:11226314 MGI:1931637 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828|MGI:2680652 (MGI:1931637|PMID:11226314), (MGI:2149271|PMID:11517264) RGD PMID:11226314 PMID:11517264 MGI:1931637 MGI:2149271 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A IEP RGD PMID:9693786 RGD:8552681 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Ckb creatine kinase B IEP RGD PMID:12093362 RGD:625711 NCBI chr 6:130,729,420...130,732,301
Ensembl chr 6:130,729,423...130,732,315
JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1 IEP RGD PMID:12093362 RGD:625711 NCBI chr 3:108,329,859...108,335,760
Ensembl chr 3:108,330,705...108,335,758
JBrowse link
G Cntn1 contactin 1 acts_upstream_of_or_within ISO MGI:3043422 (MGI:3778100|PMID:18354028) RGD PMID:18354028 MGI:3778100 NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:6477849|PMID:32675284) RGD PMID:32675284 MGI:6477849 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO MGI:5297398 (MGI:5648689|PMID:25877302) RGD PMID:25877302 MGI:5648689 NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IEP RGD PMID:16820012 RGD:5131267 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:16329132 RGD:1599699 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G En1 engrailed homeobox 1 involved_in ISO UniProtKB:P04426 (MGI:82938|PMID:8848044) RGD PMID:8848044 MGI:82938 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:16542644 RGD:1601098 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295128|PMID:21957071)
UniProt
RGD
PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
JBrowse link
G Fcgr2b Fc gamma receptor IIb involved_in ISO (MGI:3718938|PMID:17502348) RGD PMID:17502348 MGI:3718938 NCBI chr13:83,191,253...83,207,776
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (MGI:4359553|PMID:19668217) RGD PMID:19668217 MGI:4359553 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:3584266|MGI:3723630 (MGI:3584080|PMID:15983371), (MGI:3723373|PMID:17619227) RGD PMID:15983371 PMID:17619227 MGI:3584080 MGI:3723373 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (MGI:3771408|PMID:17983671) RGD PMID:17983671 MGI:3771408 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEP RGD PMID:7057182 RGD:2301991 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3624192|PMID:16651541) RGD PMID:16651541 MGI:3624192 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Gdf10 growth differentiation factor 10 IEP RGD PMID:8605043 RGD:631791 NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343
JBrowse link
G Glud1 glutamate dehydrogenase 1 IEP RGD PMID:7182074 RGD:10047093 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957
JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3814764|PMID:18636121)
Ensembl
RGD
PMID:18636121 GO_REF:0000107 MGI:3814764 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP RGD PMID:19115409 RGD:10041070 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9764759 RGD:10059383 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP
IMP
RGD PMID:23397157 PMID:21443795 RGD:10403039, RGD:12904969 NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Insr insulin receptor IEP RGD PMID:23397157 RGD:10403039 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:9526005 RGD:9685724 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:107792 (MGI:3718715|PMID:17664423)
UniProt
RGD
PMID:17664423 GO_REF:0000024 MGI:3718715 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (MGI:49987|PMID:1638738) RGD PMID:1638738 MGI:49987 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:9753172 RGD:2317716 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IEP
ISO
MGI:2158354 (MGI:3807442|PMID:18571096) RGD PMID:18571096 PMID:14751287 MGI:3807442, RGD:12743658 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mt-co1 mitochondrially encoded cytochrome c oxidase I IEP RGD PMID:2465379 RGD:2302317 NCBI chr MT:5,323...6,867
Ensembl chr MT:5,323...6,867
JBrowse link
G Mt-nd4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 IEP RGD PMID:2465379 RGD:2302317 NCBI chr MT:10,160...11,537
Ensembl chr MT:10,160...11,537
JBrowse link
G Myo16 myosin XVI involved_in IEP PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr16:78,884,405...79,364,445
Ensembl chr16:78,884,406...79,248,388
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:10803578 PMID:15876152 RGD:2293531, RGD:5688232 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IEP RGD PMID:10803578 RGD:2293531 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IEP RGD PMID:10803578 RGD:2293531 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Ncstn nicastrin IEP RGD PMID:16298244 RGD:13801190 NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IEP
ISO
(MGI:2159022|PMID:10398678) RGD PMID:10398678 PMID:12242038 MGI:2159022, RGD:1625048 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (MGI:5436217|PMID:21800304) RGD PMID:21800304 MGI:5436217 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 involved_in ISO (MGI:5285161|PMID:20393820) RGD PMID:20393820 MGI:5285161 NCBI chr 4:124,610,216...124,666,813
Ensembl chr 4:124,608,960...124,661,902
JBrowse link
G Ntm neurotrimin IEP RGD PMID:12373100 RGD:2314481 NCBI chr 8:27,376,582...28,366,604
Ensembl chr 8:27,377,773...28,366,595
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 IEP RGD PMID:20395366 RGD:11533946 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Pax6 paired box 6 IEP RGD PMID:11688562 RGD:8552644 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pdss2 decaprenyl diphosphate synthase subunit 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5304241|PMID:21871565)
UniProt
RGD
PMID:21871565 GO_REF:0000024 MGI:5304241 NCBI chr20:46,709,631...46,938,704
Ensembl chr20:46,709,649...46,938,708
JBrowse link
G Pfdn1 prefoldin subunit 1 acts_upstream_of_or_within ISO MGI:3800373 (MGI:3799445|PMID:18566413) RGD PMID:18566413 MGI:3799445 NCBI chr18:28,014,145...28,067,148
Ensembl chr18:28,014,145...28,067,064
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17335037 RGD:10059646 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IEP RGD PMID:15763176 RGD:7777107 NCBI chr 1:228,409,883...229,638,794
Ensembl chr 1:228,408,947...229,639,080
JBrowse link
G Psen1 presenilin 1 IEP RGD PMID:16298244 RGD:13801190 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 IEP RGD PMID:9917071 RGD:10045971 NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISS
ISO
GO_REF:0000024
(MGI:3703683|PMID:15543146)
(PMID:15543146)
UniProt
RGD
PMID:15543146 GO_REF:0000024 MGI:3703683 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:8653419 RGD:10043831 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S acts_upstream_of_or_within ISO MGI:2158734 (MGI:3614607|PMID:15842738) RGD PMID:15842738 MGI:3614607 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (MGI:5582020|PMID:24466353) RGD PMID:24466353 MGI:5582020 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:3716248|PMID:17558409) RGD PMID:17558409 MGI:3716248 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 IEP RGD PMID:22331407 RGD:6484221 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in IEP PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 5:166,586,581...166,606,661
Ensembl chr 5:166,586,390...166,604,521
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
JBrowse link
G Sstr1 somatostatin receptor 1 IEP RGD PMID:9166718 RGD:2325007 NCBI chr 6:75,832,292...75,836,806
Ensembl chr 6:75,832,530...75,836,802
JBrowse link
G Sstr2 somatostatin receptor 2 IEP RGD PMID:9166718 RGD:2325007 NCBI chr10:98,664,204...98,671,370
Ensembl chr10:98,664,216...98,674,351
JBrowse link
G Sstr3 somatostatin receptor 3 IEP RGD PMID:9166718 RGD:2325007 NCBI chr 7:110,092,563...110,109,043
Ensembl chr 7:110,092,575...110,099,769
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:5511091|PMID:24013501) RGD PMID:24013501 MGI:5511091 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544|MGI:2179048|MGI:5587034 (MGI:6152587|PMID:29615573) RGD PMID:29615573 MGI:6152587 NCBI chr 3:50,861,367...50,935,782
Ensembl chr 3:50,861,367...50,935,903
JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:82938|PMID:8848044) RGD PMID:8848044 MGI:82938 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (MGI:3851676|PMID:19409883) RGD PMID:19409883 MGI:3851676 NCBI chr13:89,439,633...89,447,958
Ensembl chr13:89,439,420...89,448,862
JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in ISO (MGI:1931348|PMID:2202907) RGD PMID:2202907 MGI:1931348 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:2180190 (MGI:2179541|PMID:11344116) RGD PMID:11344116 MGI:2179541 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (MGI:4840122|PMID:20980600) RGD PMID:20980600 MGI:4840122 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (MGI:4840122|PMID:20980600) RGD PMID:20980600 MGI:4840122 NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
JBrowse link
G Cbs cystathionine beta synthase acts_upstream_of_or_within ISO MGI:1857139 (MGI:3607901|PMID:16160063) RGD PMID:16160063 MGI:3607901 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (MGI:2138056|PMID:11456442) RGD PMID:11456442 MGI:2138056 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (MGI:3843561|PMID:19270340) RGD PMID:19270340 MGI:3843561 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (MGI:3695500|PMID:17166916) RGD PMID:17166916 MGI:3695500 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:1891551|PMID:11029008) RGD PMID:11029008 MGI:1891551 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (MGI:5300220|PMID:21937600) RGD PMID:21937600 MGI:5300220 NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (MGI:5902647|PMID:28002403) RGD PMID:28002403 MGI:5902647 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701
JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:1861918 (MGI:1098179|PMID:9338785) RGD PMID:9338785 MGI:1098179 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4437543|PMID:19816510) RGD PMID:19816510 MGI:4437543 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 involved_in ISO (MGI:3621833|PMID:15035989) RGD PMID:15035989 MGI:3621833 NCBI chr 1:143,280,065...143,288,799
Ensembl chr 1:143,280,065...143,285,724
JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857134 (MGI:1891561|PMID:11027399) RGD PMID:11027399 MGI:1891561 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO MGI:2682641 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO MGI:3720850 (MGI:5007596|PMID:21533046) RGD PMID:21533046 MGI:5007596 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504 (MGI:62658|PMID:8102800) RGD PMID:8102800 MGI:62658 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:1857824 (MGI:83677|PMID:8898234) RGD PMID:8898234 MGI:83677 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836
JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor like GTPase 13B involved_in ISO (MGI:5528615|PMID:23817546) RGD PMID:23817546 MGI:5528615 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
JBrowse link
G Flna filamin A IMP RGD PMID:22076441 RGD:11564351 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2156945|MGI:2684610 (MGI:4946895|PMID:21185282)
Ensembl
RGD
PMID:21185282 GO_REF:0000107 MGI:4946895 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1298218 (MGI:2686791|PMID:14715945) RGD PMID:14715945 MGI:2686791 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:96770 (MGI:2686791|PMID:14715945) RGD PMID:14715945 MGI:2686791 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
fourth ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445|MGI:3664764 (MGI:1933038|PMID:11283949), (MGI:3656460|PMID:16481398) RGD PMID:11283949 PMID:16481398 MGI:1933038 MGI:3656460 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
hindbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO MGI:3529997 (MGI:3529660|PMID:15710412) RGD PMID:15710412 MGI:3529660 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (MGI:1099899|PMID:9398437) RGD PMID:9398437 MGI:1099899 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104877 (MGI:2149154|PMID:11500373)
Ensembl
RGD
PMID:11500373 GO_REF:0000107 MGI:2149154 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (MGI:2149154|PMID:11500373) RGD PMID:11500373 MGI:2149154 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb1 Eph receptor B1 IMP RGD PMID:28276447 RGD:127285619 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Ephb2 Eph receptor B2 IMP RGD PMID:28276447 RGD:127285619 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:4418265 (MGI:4849589|PMID:21068058) RGD PMID:21068058 MGI:4849589 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
hypoglossal nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO MGI:3720850 (MGI:5007596|PMID:21533046) RGD PMID:21533046 MGI:5007596 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2a paired-like homeobox 2a involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180328|MGI:4438118 (MGI:4849589|PMID:21068058), (MGI:86465|PMID:9115735)
Ensembl
RGD
PMID:9115735 PMID:21068058 GO_REF:0000107 MGI:4849589 MGI:86465 NCBI chr 1:156,178,754...156,183,118
Ensembl chr 1:156,178,754...156,183,118
JBrowse link
medullary reticular formation development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO (PMID:9374403) RGD PMID:9374403 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
metencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:3711317 (MGI:3709911|PMID:17325035) RGD PMID:17325035 MGI:3709911 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within ISO MGI:97451 (MGI:4848254|PMID:20816794) RGD PMID:20816794 MGI:4848254 NCBI chr14:96,082,151...96,089,161
Ensembl chr14:96,082,151...96,089,086
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:97450 (MGI:4848254|PMID:20816794) RGD PMID:20816794 MGI:4848254 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1857490 (MGI:59176|PMID:2205396) RGD PMID:2205396 MGI:59176 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
negative regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:4831137 (MGI:4830814|PMID:20153830) RGD PMID:20153830 MGI:4830814 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302
JBrowse link
G Slc6a4 solute carrier family 6 member 4 IMP RGD PMID:18573488 RGD:4889489 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384
JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6368077|PMID:2438288)
Ensembl
RGD
PMID:2438288 GO_REF:0000107 MGI:6368077 NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933
JBrowse link
pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928270 (MGI:65431|PMID:8313466) RGD PMID:8313466 MGI:65431 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
positive regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor acts_upstream_of_or_within ISO (MGI:1329746|PMID:10027293) RGD PMID:10027293 MGI:1329746 NCBI chr 2:218,219,408...218,302,370
Ensembl chr 2:218,219,415...218,302,064
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (MGI:1329746|PMID:10027293) RGD PMID:10027293 MGI:1329746 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5439169 (MGI:5512663|PMID:24062445)
Ensembl
RGD
PMID:24062445 GO_REF:0000107 MGI:5512663 NCBI chr13:46,598,574...46,605,421
Ensembl chr13:46,598,578...46,605,421
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO (MGI:1329746|PMID:10027293) RGD PMID:10027293 MGI:1329746 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1329746|PMID:10027293) RGD PMID:10027293 MGI:1329746 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4831137 (MGI:4830814|PMID:20153830)
RGD PMID:20153830 PMID:21873635 MGI:4830814, RGD:13792537 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:1351063|PMID:10624947) RGD PMID:10624947 MGI:1351063 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3621696|PMID:12123610) RGD PMID:12089526 PMID:12123610 MGI:2181860 MGI:3621696 NCBI chr 4:109,293,978...110,443,413
Ensembl chr 4:109,293,978...110,443,522
JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:54,012,963...54,066,751
Ensembl chr 8:54,016,006...54,066,666
JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:1337096|MGI:1861918 (MGI:1098179|PMID:9338785), (MGI:5545793|PMID:24210661) RGD PMID:9338785 PMID:24210661 MGI:1098179 MGI:5545793 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 acts_upstream_of_or_within ISO MGI:4838182 (MGI:5312167|PMID:22357600) RGD PMID:22357600 MGI:5312167 NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (MGI:5582020|PMID:24466353) RGD PMID:24466353 MGI:5582020 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO MGI:108554 (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:97,038,845...97,048,080
Ensembl chr 8:97,038,840...97,047,824
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830
JBrowse link
regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (MGI:5300220|PMID:21937600) RGD PMID:21937600 MGI:5300220 NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342
JBrowse link
retrotrapezoid nucleus neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b involved_in ISO (MGI:4418003|PMID:19940179) RGD PMID:19940179 MGI:4418003 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
rhombomere 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3624192|PMID:16651541) RGD PMID:16651541 MGI:3624192 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857626 (MGI:1341029|PMID:7508007)
GO_REF:0000107
RGD
Ensembl
PMID:7508007 GO_REF:0000107 MGI:1341029 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
rhombomere 3 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:96170 (MGI:1306866|PMID:9806922) RGD PMID:9806922 MGI:1306866 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504|MGI:95296 (MGI:1306866|PMID:9806922) RGD PMID:9806922 MGI:1306866 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO MGI:96183 (MGI:1341029|PMID:7508007) RGD PMID:7508007 MGI:1341029 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96174 (MGI:1335668|PMID:10230789) RGD PMID:10230789 MGI:1335668 NCBI chr10:81,317,927...81,320,223
Ensembl chr10:81,318,026...81,320,192
JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (MGI:64171|PMID:7903221) RGD PMID:7903221 MGI:64171 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857626 (MGI:1335668|PMID:10230789)
GO_REF:0000107
RGD
Ensembl
PMID:10230789 GO_REF:0000107 MGI:1335668 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:52248|PMID:8093858)
UniProt
RGD
PMID:8093858 GO_REF:0000024 MGI:52248 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
rhombomere 4 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504|MGI:96182 (MGI:1306866|PMID:9806922), (MGI:1346308|PMID:10529420), (MGI:62658|PMID:8102800) RGD PMID:8102800 PMID:9806922 PMID:10529420 MGI:1306866 MGI:1346308 MGI:62658 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96170 (MGI:1346308|PMID:10529420) RGD PMID:10529420 MGI:1346308 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836
JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96174 (MGI:1335668|PMID:10230789) RGD PMID:10230789 MGI:1335668 NCBI chr10:81,317,927...81,320,223
Ensembl chr10:81,318,026...81,320,192
JBrowse link
rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504|MGI:96182 (MGI:1306866|PMID:9806922), (MGI:1346308|PMID:10529420), (MGI:62658|PMID:8102800) RGD PMID:8102800 PMID:9806922 PMID:10529420 MGI:1306866 MGI:1346308 MGI:62658 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96170 (MGI:1346308|PMID:10529420) RGD PMID:10529420 MGI:1346308 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836
JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (MGI:67780|PMID:7925021) RGD PMID:7925021 MGI:67780 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (MGI:64171|PMID:7903221) RGD PMID:7903221 MGI:64171 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:52248|PMID:8093858), (MGI:6393337|PMID:11823429)
UniProt
RGD
PMID:8093858 PMID:11823429 GO_REF:0000024 MGI:52248 MGI:6393337 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
rhombomere 6 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (MGI:67780|PMID:7925021) RGD PMID:7925021 MGI:67780 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
JBrowse link
rhombomere development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO (MGI:4949985|PMID:21320481) RGD PMID:21320481 MGI:4949985 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836
JBrowse link
G Hoxb3 homeo box B3 acts_upstream_of_or_within ISO (MGI:4949985|PMID:21320481) RGD PMID:21320481 MGI:4949985 NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107
JBrowse link
rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 IMP RGD PMID:21501682 RGD:8552349 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (MGI:3624180|PMID:16571625) RGD PMID:16571625 MGI:3624180 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:2446434|MGI:3664541|MGI:95727 (MGI:3624180|PMID:16571625) RGD PMID:16571625 MGI:3624180 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:1338342|PMID:10375501)
Ensembl
RGD
PMID:10375501 GO_REF:0000107 MGI:1338342 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176173|MGI:2176256 (MGI:3624180|PMID:16571625)
Ensembl
RGD
PMID:16571625 GO_REF:0000107 MGI:3624180 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Zfp423 zinc finger protein 423 acts_upstream_of_or_within ISO (MGI:5805574|PMID:27727273) RGD PMID:27727273 MGI:5805574 NCBI chr19:19,111,538...19,407,371
Ensembl chr19:19,110,238...19,407,373
JBrowse link
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3621705|PMID:12885554) RGD PMID:12885554 MGI:3621705 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856210 (MGI:77774|PMID:8719615) RGD PMID:8719615 MGI:77774 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO MGI:1857442 (MGI:3625254|PMID:11223304) RGD PMID:11223304 MGI:3625254 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        hindbrain development 222
          cell differentiation in hindbrain + 33
          cell migration in hindbrain + 23
          cell proliferation in hindbrain + 20
          fourth ventricle development 2
          hindbrain maturation + 7
          hindbrain morphogenesis + 63
          medulla oblongata development + 5
          metencephalon development + 168
          rhombomere development + 9
Path 2
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        multicellular organism development 5773
          system development 5413
            nervous system development 2747
              central nervous system development 1281
                brain development 983
                  hindbrain development 222
                    cell differentiation in hindbrain + 33
                    cell migration in hindbrain + 23
                    cell proliferation in hindbrain + 20
                    fourth ventricle development 2
                    hindbrain maturation + 7
                    hindbrain morphogenesis + 63
                    medulla oblongata development + 5
                    metencephalon development + 168
                    rhombomere development + 9
paths to the root