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ONTOLOGY REPORT - ANNOTATIONS

Term:metencephalon development
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Accession:GO:0022037 term browser browse the term
Definition:The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure.

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metencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:3711317 (MGI:3709911|PMID:17325035) RGD PMID:17325035 MGI:3709911 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537 		JBrowse link
G Otx1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97451 (MGI:4848254|PMID:20816794)		 Ensembl
RGD		 PMID:20816794 GO_REF:0000107 MGI:4848254 NCBI chr14:106,861,556...106,864,933
Ensembl chr14:106,861,676...106,864,892 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:97450 (MGI:4848254|PMID:20816794) RGD PMID:20816794 MGI:4848254 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
Ensembl chr15:25,502,019...25,505,691 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1857490 (MGI:59176|PMID:2205396) RGD PMID:2205396 MGI:59176 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046 		JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:19682991 RGD:6903898 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:1889058|PMID:8855328) RGD PMID:8855328 MGI:1889058 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383 		JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO
ISS		 (PMID:24766809), (PMID:24766810)
(MGI:5568133|PMID:24766809)
GO_REF:0000024		 RGD
UniProt		 PMID:24766809 PMID:24766810 GO_REF:0000024 MGI:5568133 NCBI chr 3:72,125,269...72,137,122
Ensembl chr 3:72,125,273...72,128,973 		JBrowse link
G Dixdc1 DIX domain containing 1 IMP RGD PMID:19339625 RGD:2308917 NCBI chr 8:55,091,232...55,164,636
Ensembl chr 8:55,091,235...55,162,421 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:2661097 (MGI:4833736|PMID:20798045) RGD PMID:20798045 MGI:4833736 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:53,350,073...53,421,992
Ensembl chr13:53,351,717...53,420,111 		JBrowse link
G Nav2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) RGD PMID:21419114 MGI:5050602 NCBI chr 1:104,575,765...104,941,554
Ensembl chr 1:104,576,589...104,941,552 		JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3621523|PMID:16504944)		 UniProt
RGD		 PMID:16504944 GO_REF:0000024 MGI:3621523 NCBI chr10:86,280,865...86,282,681
Ensembl chr10:86,280,892...86,282,693 		JBrowse link
G Ogdh oxoglutarate dehydrogenase acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr14:86,414,924...86,481,903
Ensembl chr14:86,414,949...86,613,327 		JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:1340775|PMID:10407039) RGD PMID:10407039 MGI:1340775 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99511 (MGI:5545830|PMID:24431450)		 Ensembl
RGD		 PMID:24431450 GO_REF:0000107 MGI:5545830 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within ISO MGI:1346866|MGI:4868451 (MGI:5545830|PMID:24431450) RGD PMID:24431450 MGI:5545830 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999 		JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (MGI:3624180|PMID:16571625) RGD PMID:16571625 MGI:3624180 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:2446434|MGI:3664541|MGI:95727 (MGI:3624180|PMID:16571625) RGD PMID:16571625 MGI:3624180 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (MGI:4438783|PMID:20096683) RGD PMID:20096683 MGI:4438783 NCBI chr20:12,943,523...13,038,615
Ensembl chr20:12,944,786...13,038,431 		JBrowse link
G Rfx4 regulatory factor X4 acts_upstream_of_or_within ISO (MGI:2669568|PMID:12925582) RGD PMID:12925582 MGI:2669568 NCBI chr 7:25,831,358...25,909,976
Ensembl chr 7:25,808,419...25,907,849 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176173|MGI:2176256 (MGI:3624180|PMID:16571625)		 Ensembl
RGD		 PMID:16571625 GO_REF:0000107 MGI:3624180 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770 		JBrowse link
G Trnp1 TMF1-regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) RGD PMID:23622239 MGI:5490679 NCBI chr 5:151,703,139...151,709,988
Ensembl chr 5:151,709,200...151,709,877 		JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (MGI:5532214|PMID:23861879) RGD PMID:23861879 MGI:5532214 NCBI chr  X:10,510,033...10,660,555
Ensembl chr  X:10,510,033...10,630,297 		JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295128|PMID:21957071)		 UniProt
RGD		 PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:141,158,769...141,185,781
Ensembl chr 7:141,157,963...141,185,710 		JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) RGD PMID:10096022 MGI:2178952 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916 		JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:112,677,932...112,789,615
Ensembl chr 3:112,684,152...112,789,289 		JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:4831137 (MGI:4830814|PMID:20153830)		 RGD PMID:20153830, PMID:21873635 MGI:4830814, RGD:13792537 NCBI chr 1:214,407,072...214,410,069
Ensembl chr 1:214,408,100...214,408,549
Ensembl chr 1:214,408,100...214,408,549 		JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2387774 (MGI:3709698|PMID:17409116)		 Ensembl
RGD		 PMID:17409116 GO_REF:0000107 MGI:3709698 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094 		JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:53,350,073...53,421,992
Ensembl chr13:53,351,717...53,420,111 		JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325 		JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q61625 (MGI:4839424|PMID:20537373)		 BHF-UCL
RGD		 PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
UniProtKB:Q9R171 (MGI:4839424|PMID:20537373)
GO_REF:0000107		 BHF-UCL
RGD
Ensembl		 PMID:20537373 GO_REF:0000024 GO_REF:0000107 MGI:4839424 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778 		JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (MGI:3769586|PMID:17984326) RGD PMID:17984326 MGI:3769586 NCBI chr 1:212,229,751...212,279,254
Ensembl chr 1:212,230,259...212,277,694 		JBrowse link
G Mtpn myotrophin IEP RGD PMID:8144589 RGD:632797 NCBI chr 4:63,012,009...63,039,422
Ensembl chr 4:63,012,011...63,039,422 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (MGI:5436217|PMID:21800304) RGD PMID:21800304 MGI:5436217 NCBI chr19:25,818,640...25,914,777
Ensembl chr19:25,821,780...25,914,696 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q61625|UniProtKB:Q9R171 (MGI:4839424|PMID:20537373)		 BHF-UCL
RGD		 PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) RGD PMID:27160703 NCBI chr  X:68,185,865...68,579,518
Ensembl chr  X:68,189,161...68,563,137 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:1351063|PMID:10624947) RGD PMID:10624947 MGI:1351063 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (MGI:1195230|PMID:9405095) RGD PMID:9405095 MGI:1195230 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609 		JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (MGI:70349|PMID:7697385) RGD PMID:7697385 MGI:70349 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550 		JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5504540|PMID:23688253)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23688253 GO_REF:0000024 GO_REF:0000107 MGI:5504540 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379 		JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp365 zinc finger protein 365 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5559035|PMID:23912123)		 UniProt
RGD		 PMID:23912123 GO_REF:0000024 MGI:5559035 NCBI chr20:22,060,160...22,083,766
Ensembl chr20:22,060,224...22,086,108 		JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043 		JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (MGI:5703669|PMID:26609159) RGD PMID:26609159 MGI:5703669 NCBI chr 1:282,134,676...282,140,370
Ensembl chr 1:282,134,981...282,135,772 		JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (MGI:5703669|PMID:26609159) RGD PMID:26609159 MGI:5703669 NCBI chr 1:85,324,017...85,362,266
Ensembl chr 1:85,324,043...85,362,241 		JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:5,510,009...5,614,416
Ensembl chr17:5,511,385...5,614,435 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856466 (MGI:71790|PMID:2473662) RGD PMID:2473662 MGI:71790 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644 		JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO MGI:3505741 (MGI:3510013|PMID:10973246) RGD PMID:10973246 MGI:3510013 NCBI chr12:40,264,601...40,335,637
Ensembl chr12:40,266,662...40,332,612 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (MGI:1347769|PMID:10630211), (MGI:62667|PMID:1306163), (MGI:68980|PMID:7834360) RGD PMID:1306163 PMID:7834360 PMID:10630211 MGI:1347769 MGI:62667 MGI:68980 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550 		JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:4831137 (MGI:4830814|PMID:20153830)		 RGD PMID:20153830, PMID:21873635 MGI:4830814, RGD:13792537 NCBI chr 1:214,407,072...214,410,069
Ensembl chr 1:214,408,100...214,408,549
Ensembl chr 1:214,408,100...214,408,549 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295128|PMID:21957071)		 UniProt
RGD		 PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:141,158,769...141,185,781
Ensembl chr 7:141,157,963...141,185,710 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (MGI:4461108|PMID:20041218) RGD PMID:20041218 MGI:4461108 NCBI chr 8:72,029,550...72,198,363
Ensembl chr 8:72,029,489...72,198,358 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr 1:265,772,729...265,798,442
Ensembl chr 1:265,785,409...265,798,167 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:107792 (MGI:3718715|PMID:17664423)		 UniProt
RGD		 PMID:17664423 GO_REF:0000024 MGI:3718715 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr12:41,663,000...41,671,437
Ensembl chr12:41,663,000...41,671,437 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:3521746 (MGI:3512714|PMID:15345707) RGD PMID:15345707 MGI:3512714 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875 		JBrowse link
G Rora RAR-related orphan receptor A acts_upstream_of_or_within ISO MGI:1857035 (MGI:86446|PMID:8996814) RGD PMID:8996814 MGI:86446 NCBI chr 8:75,515,886...75,616,477
Ensembl chr 8:75,516,904...75,607,212 		JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (MGI:5300220|PMID:21937600), (MGI:5565016|PMID:24491816) RGD PMID:21937600 PMID:24491816 MGI:5300220 MGI:5565016 NCBI chr18:73,145,596...73,199,395
Ensembl chr18:73,157,973...73,193,377 		JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6358090 (MGI:5921109|PMID:28934388) RGD PMID:28934388 MGI:5921109 NCBI chr18:24,369,104...24,397,412
Ensembl chr18:24,369,125...24,397,551 		JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2137515|MGI:2152544|MGI:2179048|MGI:5587034 (MGI:6152587|PMID:29615573) RGD PMID:29615573 MGI:6152587 NCBI chr 3:52,286,794...52,361,060
Ensembl chr 3:52,286,794...52,361,060 		JBrowse link
G Ttll1 tubulin tyrosine ligase like 1 acts_upstream_of_or_within ISO MGI:1918244 (MGI:6269036|PMID:30420556) RGD PMID:30420556 MGI:6269036 NCBI chr 7:124,338,396...124,367,719
Ensembl chr 7:124,338,395...124,367,630 		JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within ISO MGI:3618596 (MGI:3640843|PMID:16906134) RGD PMID:16906134 MGI:3640843 NCBI chr19:43,193,264...43,215,281
Ensembl chr19:43,193,257...43,215,281 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (MGI:3630371|PMID:16625205), (MGI:4829568|PMID:20577052) RGD PMID:16625205 PMID:20577052 MGI:3630371 MGI:4829568 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124 		JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO MGI:3849305 (MGI:3849110|PMID:19265195) RGD PMID:19265195 MGI:3849110 NCBI chr 5:136,707,510...136,717,345
Ensembl chr 5:136,707,510...136,715,981 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (MGI:62667|PMID:1306163) RGD PMID:1306163 MGI:62667 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295128|PMID:21957071)		 UniProt
RGD		 PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:141,158,769...141,185,781
Ensembl chr 7:141,157,963...141,185,710 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4437543|PMID:19816510) RGD PMID:19816510 MGI:4437543 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762 		JBrowse link
G Klhl1 kelch-like family member 1 acts_upstream_of_or_within ISO MGI:3664534|MGI:3664543 (MGI:3664006|PMID:17005861) RGD PMID:17005861 MGI:3664006 NCBI chr15:80,270,846...80,714,176
Ensembl chr15:80,271,731...80,713,153 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:3664765 (MGI:3656460|PMID:16481398) RGD PMID:16481398 MGI:3656460 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:3769195|PMID:17712420) RGD PMID:17712420 MGI:3769195 NCBI chr10:88,979,363...88,986,879
Ensembl chr10:88,979,383...88,986,867 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (MGI:5436217|PMID:21800304) RGD PMID:21800304 MGI:5436217 NCBI chr19:25,818,640...25,914,777
Ensembl chr19:25,821,780...25,914,696 		JBrowse link
G Sez6 seizure related 6 homolog acts_upstream_of_or_within ISO MGI:1935121|MGI:2385295 (MGI:3654399|PMID:16814779) RGD PMID:16814779 MGI:3654399 NCBI chr10:64,865,802...64,915,461
Ensembl chr10:64,865,805...64,915,148 		JBrowse link
G Sez6l seizure related 6 homolog like acts_upstream_of_or_within ISO MGI:104745|MGI:2385295 (MGI:3654399|PMID:16814779) RGD PMID:16814779 MGI:3654399 NCBI chr12:50,090,345...50,243,020
Ensembl chr12:50,090,464...50,241,995 		JBrowse link
G Sez6l2 seizure related 6 homolog like 2 acts_upstream_of_or_within ISO MGI:104745|MGI:1935121 (MGI:3654399|PMID:16814779) RGD PMID:16814779 MGI:3654399 NCBI chr 1:198,383,201...198,403,544
Ensembl chr 1:198,383,201...198,403,544 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:38,779,132...38,782,489
Ensembl chr10:38,779,132...38,782,419 		JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta acts_upstream_of_or_within ISO (MGI:3762988|PMID:17954912) RGD PMID:17954912 MGI:3762988 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601 		JBrowse link
G Whrn whirlin involved_in IEA
ISO		 GO_REF:0000107
(MGI:5516521|PMID:24011083)		 Ensembl
RGD		 PMID:24011083 GO_REF:0000107 MGI:5516521 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206 		JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 acts_upstream_of_or_within ISO MGI:2671790 (MGI:4454933|PMID:20502676) RGD PMID:20502676 MGI:4454933 NCBI chr 8:49,051,257...49,075,861
Ensembl chr 8:49,051,246...49,075,892 		JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (MGI:5582020|PMID:24466353) RGD PMID:24466353 MGI:5582020 NCBI chr 5:167,330,966...167,664,506
Ensembl chr 5:167,331,035...167,664,505 		JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:3709537|PMID:17409239) RGD PMID:17409239 MGI:3709537 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325 		JBrowse link
G Coq8b coenzyme Q8B involved_in ISS
ISO		 GO_REF:0000024
(PMID:27499294)		 UniProt
RGD		 PMID:27499294 GO_REF:0000024 NCBI chr 1:84,043,487...84,067,066
Ensembl chr 1:84,044,551...84,067,066 		JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4127354 (MGI:4438955|PMID:20231455)		 Ensembl
RGD		 PMID:20231455 GO_REF:0000107 MGI:4438955 NCBI chr 1:219,964,429...220,006,811
Ensembl chr 1:219,964,429...220,005,068 		JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5504540|PMID:23688253)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23688253 GO_REF:0000024 GO_REF:0000107 MGI:5504540 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:53,350,073...53,421,992
Ensembl chr13:53,351,717...53,420,111 		JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IEP RGD PMID:7182074 RGD:10047093 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499 		JBrowse link
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:44,272,859...44,342,501
Ensembl chr 3:44,270,653...44,342,355 		JBrowse link
G Aif1 allograft inflammatory factor 1 IEP RGD PMID:9698327 RGD:704401 NCBI chr20:5,161,350...5,167,176
Ensembl chr20:5,161,333...5,166,448 		JBrowse link
G Ak1 adenylate kinase 1 IEP RGD PMID:9920788 RGD:632499 NCBI chr 3:11,652,143...11,659,135 JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:9920788 RGD:632499 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693 		JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 IEP RGD PMID:12843293 RGD:1299593 NCBI chr 7:138,704,124...138,707,221
Ensembl chr 7:138,704,126...138,707,221 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEP RGD PMID:7057182 RGD:2301991 NCBI chr 9:78,862,013...78,882,061
Ensembl chr 9:78,862,013...78,882,060 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:3664103 (MGI:3654591|PMID:16880690) RGD PMID:16880690 MGI:3654591 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325 		JBrowse link
G Atrn attractin acts_upstream_of_or_within ISO MGI:1856082 (MGI:3771742|PMID:18064672) RGD PMID:18064672 MGI:3771742 NCBI chr 3:123,434,409...123,567,922
Ensembl chr 3:123,434,409...123,567,918 		JBrowse link
G Ccr1 C-C motif chemokine receptor 1 IEP RGD PMID:12541321 RGD:5688179 NCBI chr 8:132,996,646...133,002,201
Ensembl chr 8:132,996,649...133,002,201 		JBrowse link
G Cd3e CD3e molecule involved_in ISO (MGI:3718938|PMID:17502348) RGD PMID:17502348 MGI:3718938 NCBI chr 8:49,297,604...49,309,370
Ensembl chr 8:49,297,608...49,308,806 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:1931637|PMID:11226314) RGD PMID:11226314 MGI:1931637 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383 		JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828|MGI:2680652 (MGI:1931637|PMID:11226314), (MGI:2149271|PMID:11517264) RGD PMID:11226314 PMID:11517264 MGI:1931637 MGI:2149271 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255 		JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:82,120,059...82,121,527
Ensembl chr 9:82,120,059...82,121,527 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A IEP RGD PMID:9693786 RGD:8552681 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175 		JBrowse link
G Ckb creatine kinase B IEP RGD PMID:12093362 RGD:625711 NCBI chr 6:136,142,956...136,145,838
Ensembl chr 6:136,142,956...136,145,837 		JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1 IEP RGD PMID:12093362 RGD:625711 NCBI chr 3:113,318,559...113,324,459
Ensembl chr 3:113,318,563...113,324,461 		JBrowse link
G Cntn1 contactin 1 acts_upstream_of_or_within ISO MGI:3043422 (MGI:3778100|PMID:18354028) RGD PMID:18354028 MGI:3778100 NCBI chr 7:133,290,606...133,588,314
Ensembl chr 7:133,400,485...133,586,677 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector 1 acts_upstream_of_or_within ISO MGI:5297398 (MGI:5648689|PMID:25877302) RGD PMID:25877302 MGI:5648689 NCBI chr 2:57,274,175...57,350,003
NCBI chr 2:57,444,373...57,472,465
Ensembl chr 2:57,276,919...57,348,481 		JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IEP RGD PMID:16820012 RGD:5131267 NCBI chr 4:85,286,371...85,329,374
Ensembl chr 4:85,286,372...85,329,362 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:16329132 RGD:1599699 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893 		JBrowse link
G En1 engrailed homeobox 1 involved_in ISO UniProtKB:P04426 (MGI:82938|PMID:8848044) RGD PMID:8848044 MGI:82938 NCBI chr13:36,532,758...36,537,888
Ensembl chr13:36,532,758...36,537,093 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371 		JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:16542644 RGD:1601098 NCBI chr 6:99,163,953...99,214,711
Ensembl chr 6:99,164,357...99,214,251 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295128|PMID:21957071)		 UniProt
RGD		 PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:141,158,769...141,185,781
Ensembl chr 7:141,157,963...141,185,710 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO (MGI:3718938|PMID:17502348) RGD PMID:17502348 MGI:3718938 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (MGI:4359553|PMID:19668217) RGD PMID:19668217 MGI:4359553 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:3584266|MGI:3723630 (MGI:3584080|PMID:15983371), (MGI:3723373|PMID:17619227) RGD PMID:15983371 PMID:17619227 MGI:3584080 MGI:3723373 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (MGI:3771408|PMID:17983671) RGD PMID:17983671 MGI:3771408 NCBI chr 1:113,034,251...113,265,364
Ensembl chr 1:112,976,770...113,265,364 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEP RGD PMID:7057182 RGD:2301991 NCBI chr11:31,780,477...31,805,728
Ensembl chr11:31,780,487...31,805,728 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3624192|PMID:16651541) RGD PMID:16651541 MGI:3624192 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817 		JBrowse link
G Gdf10 growth differentiation factor 10 IEP RGD PMID:8605043 RGD:631791 NCBI chr16:10,250,508...10,262,383
Ensembl chr16:10,250,404...10,263,150 		JBrowse link
G Glud1 glutamate dehydrogenase 1 IEP RGD PMID:7182074 RGD:10047093 NCBI chr16:10,661,486...10,695,557
Ensembl chr16:10,662,021...10,695,557 		JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3814764|PMID:18636121)		 Ensembl
RGD		 PMID:18636121 GO_REF:0000107 MGI:3814764 NCBI chr10:88,257,975...88,266,210
Ensembl chr10:88,257,976...88,266,210 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP RGD PMID:19115409 RGD:10041070 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9764759 RGD:10059383 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP
IMP		 RGD PMID:23397157, PMID:21443795 RGD:10403039, RGD:12904969 NCBI chr 1:128,924,921...129,213,816
Ensembl chr 1:128,924,966...129,206,516 		JBrowse link
G Insr insulin receptor IEP RGD PMID:23397157 RGD:10403039 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414 		JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:9526005 RGD:9685724 NCBI chr 1:102,414,352...102,456,718
Ensembl chr 1:102,414,625...102,456,411 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr 1:265,772,729...265,798,442
Ensembl chr 1:265,785,409...265,798,167 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:107792 (MGI:3718715|PMID:17664423)		 UniProt
RGD		 PMID:17664423 GO_REF:0000024 MGI:3718715 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (MGI:3718715|PMID:17664423) RGD PMID:17664423 MGI:3718715 NCBI chr12:41,663,000...41,671,437
Ensembl chr12:41,663,000...41,671,437 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (MGI:49987|PMID:1638738) RGD PMID:1638738 MGI:49987 NCBI chr13:85,916,753...86,061,534
Ensembl chr13:85,918,252...86,061,176 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:9753172 RGD:2317716 NCBI chr 5:75,557,038...75,678,067
Ensembl chr 5:75,557,042...75,676,584 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within
involved_in		 IEP
ISO
IEA		 MGI:2158354 (MGI:3807442|PMID:18571096)
GO_REF:0000107		 RGD
Ensembl		 PMID:18571096, PMID:14751287 GO_REF:0000107 MGI:3807442, RGD:12743658 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233 		JBrowse link
G Mt-co1 mitochondrially encoded cytochrome c oxidase I IEP RGD PMID:2465379 RGD:2302317 NCBI chr MT:5,323...6,867
Ensembl chr MT:5,323...6,867 		JBrowse link
G Mt-nd4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 IEP RGD PMID:2465379 RGD:2302317 NCBI chr MT:10,160...11,537
Ensembl chr MT:10,160...11,537 		JBrowse link
G Myo16 myosin XVI involved_in IEP PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr16:84,575,149...85,177,834
Ensembl chr16:84,575,150...84,939,323 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:10803578, PMID:15876152 RGD:2293531, RGD:5688232 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IEP RGD PMID:10803578 RGD:2293531 NCBI chr 5:5,466,544...5,696,540
Ensembl chr 5:5,616,483...5,694,598 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IEP RGD PMID:10803578 RGD:2293531 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890 		JBrowse link
G Ncstn nicastrin IEP RGD PMID:16298244 RGD:13801190 NCBI chr13:90,451,046...90,467,256
Ensembl chr13:90,451,044...90,467,256 		JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IEP
ISO		 (MGI:2159022|PMID:10398678) RGD PMID:10398678, PMID:12242038 MGI:2159022, RGD:1625048 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (MGI:5436217|PMID:21800304) RGD PMID:21800304 MGI:5436217 NCBI chr19:25,818,640...25,914,777
Ensembl chr19:25,821,780...25,914,696 		JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 involved_in ISO (MGI:5285161|PMID:20393820) RGD PMID:20393820 MGI:5285161 NCBI chr 4:124,005,287...124,030,349
Ensembl chr 4:124,005,280...124,030,349 		JBrowse link
G Ntm neurotrimin IEP RGD PMID:12373100 RGD:2314481 NCBI chr 8:30,039,332...31,041,755
Ensembl chr 8:30,039,408...30,222,036 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 IEP RGD PMID:20395366 RGD:11533946 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355 		JBrowse link
G Pax6 paired box 6 IEP RGD PMID:11688562 RGD:8552644 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Pdss2 decaprenyl diphosphate synthase subunit 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5304241|PMID:21871565)		 UniProt
RGD		 PMID:21871565 GO_REF:0000024 MGI:5304241 NCBI chr20:47,966,513...48,192,747
Ensembl chr20:47,966,583...48,192,743 		JBrowse link
G Pfdn1 prefoldin subunit 1 acts_upstream_of_or_within ISO MGI:3800373 (MGI:3799445|PMID:18566413) RGD PMID:18566413 MGI:3799445 NCBI chr18:29,233,987...29,290,447
Ensembl chr18:29,233,987...29,290,447 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17335037 RGD:10059646 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IEP RGD PMID:15763176 RGD:7777107 NCBI chr 1:248,982,039...250,300,952 JBrowse link
G Psen1 presenilin 1 IEP RGD PMID:16298244 RGD:13801190 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798 		JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 IEP RGD PMID:9917071 RGD:10045971 NCBI chr 2:223,261,444...223,323,075
Ensembl chr 2:223,262,852...223,322,585 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISS
ISO		 GO_REF:0000024
(MGI:3703683|PMID:15543146)
(PMID:15543146)		 UniProt
RGD		 PMID:15543146 GO_REF:0000024 MGI:3703683 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:8653419 RGD:10043831 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158734 (MGI:3614607|PMID:15842738)		 Ensembl
RGD		 PMID:15842738 GO_REF:0000107 MGI:3614607 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939 		JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (MGI:5582020|PMID:24466353) RGD PMID:24466353 MGI:5582020 NCBI chr 5:167,330,966...167,664,506
Ensembl chr 5:167,331,035...167,664,505 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:3716248|PMID:17558409) RGD PMID:17558409 MGI:3716248 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 IEP RGD PMID:22331407 RGD:6484221 NCBI chr 8:128,169,191...128,266,681
Ensembl chr 8:128,169,191...128,266,639 		JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in IEP PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 5:173,425,922...173,444,478
Ensembl chr 5:173,425,907...173,444,620 		JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:43,129,413...43,140,442
Ensembl chr 9:43,129,415...43,139,870 		JBrowse link
G Sstr1 somatostatin receptor 1 IEP RGD PMID:9166718 RGD:2325007 NCBI chr 6:79,252,914...79,258,611
Ensembl chr 6:79,254,339...79,258,611 		JBrowse link
G Sstr2 somatostatin receptor 2 IEP RGD PMID:9166718 RGD:2325007 NCBI chr10:102,136,283...102,143,449
Ensembl chr10:102,136,283...102,143,434 		JBrowse link
G Sstr3 somatostatin receptor 3 IEP RGD PMID:9166718 RGD:2325007 NCBI chr 7:119,760,881...119,768,082
Ensembl chr 7:119,760,888...119,768,082 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:5511091|PMID:24013501) RGD PMID:24013501 MGI:5511091 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449 		JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:112,677,932...112,789,615
Ensembl chr 3:112,684,152...112,789,289 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544|MGI:2179048|MGI:5587034 (MGI:6152587|PMID:29615573) RGD PMID:29615573 MGI:6152587 NCBI chr 3:52,286,794...52,361,060
Ensembl chr 3:52,286,794...52,361,060 		JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:82938|PMID:8848044) RGD PMID:8848044 MGI:82938 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (MGI:3851676|PMID:19409883) RGD PMID:19409883 MGI:3851676 NCBI chr13:95,582,234...95,593,316
Ensembl chr13:95,589,668...95,591,236 		JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in ISO (MGI:1931348|PMID:2202907) RGD PMID:2202907 MGI:1931348 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046 		JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:2180190 (MGI:2179541|PMID:11344116) RGD PMID:11344116 MGI:2179541 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550 		JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (MGI:4840122|PMID:20980600) RGD PMID:20980600 MGI:4840122 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
Ensembl chr 3:10,041,826...10,144,388 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (MGI:4840122|PMID:20980600) RGD PMID:20980600 MGI:4840122 NCBI chr13:74,154,533...74,333,244
Ensembl chr13:74,154,835...74,333,244 		JBrowse link
G Cbs cystathionine beta synthase acts_upstream_of_or_within ISO MGI:1857139 (MGI:3607901|PMID:16160063) RGD PMID:16160063 MGI:3607901 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (MGI:2138056|PMID:11456442) RGD PMID:11456442 MGI:2138056 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (MGI:3843561|PMID:19270340) RGD PMID:19270340 MGI:3843561 NCBI chr19:57,614,813...57,640,524
Ensembl chr19:57,614,628...57,640,726 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (MGI:3695500|PMID:17166916) RGD PMID:17166916 MGI:3695500 NCBI chr 3:12,608,748...12,686,937
Ensembl chr 3:12,609,574...12,686,869 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2156191 (MGI:1891551|PMID:11029008)		 RGD PMID:11029008, PMID:21873635 MGI:1891551, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (MGI:5300220|PMID:21937600) RGD PMID:21937600 MGI:5300220 NCBI chr18:73,145,596...73,199,395
Ensembl chr18:73,157,973...73,193,377 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (MGI:5902647|PMID:28002403) RGD PMID:28002403 MGI:5902647 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678 		JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:1861918 (MGI:1098179|PMID:9338785) RGD PMID:9338785 MGI:1098179 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4437543|PMID:19816510) RGD PMID:19816510 MGI:4437543 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762 		JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 involved_in ISO (MGI:3621833|PMID:15035989) RGD PMID:15035989 MGI:3621833 NCBI chr 1:153,589,471...153,598,376
Ensembl chr 1:153,589,471...153,598,375 		JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857134 (MGI:1891561|PMID:11027399)		 Ensembl
RGD		 PMID:11027399 GO_REF:0000107 MGI:1891561 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO MGI:2682641 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916 		JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504 (MGI:62658|PMID:8102800) RGD PMID:8102800 MGI:62658 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066 		JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:1857824 (MGI:83677|PMID:8898234) RGD PMID:8898234 MGI:83677 NCBI chr10:84,214,358...84,215,812
Ensembl chr10:84,214,358...84,215,687 		JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2a paired-like homeobox 2a involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180328|MGI:4438118 (MGI:4849589|PMID:21068058), (MGI:86465|PMID:9115735)		 Ensembl
RGD		 PMID:9115735 PMID:21068058 GO_REF:0000107 MGI:4849589 MGI:86465 NCBI chr 1:166,893,734...166,898,252
Ensembl chr 1:166,893,734...166,898,252 		JBrowse link
pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:38,779,132...38,782,489
Ensembl chr10:38,779,132...38,782,419 		JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928270 (MGI:65431|PMID:8313466) RGD PMID:8313466 MGI:65431 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663 		JBrowse link
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255 		JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:82,120,059...82,121,527
Ensembl chr 9:82,120,059...82,121,527 		JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3621705|PMID:12885554) RGD PMID:12885554 MGI:3621705 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856210 (MGI:77774|PMID:8719615) RGD PMID:8719615 MGI:77774 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550 		JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO MGI:1857442 (MGI:3625254|PMID:11223304) RGD PMID:11223304 MGI:3625254 NCBI chr11:32,498,260...32,511,202
Ensembl chr11:32,498,261...32,508,420 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    developmental process 6792
      anatomical structure development 6265
        metencephalon development 166
          cerebellum development + 153
          pons development + 14
Path 2
Term Annotations click to browse term
  biological_process 19612
    developmental process 6792
      anatomical structure development 6265
        multicellular organism development 5747
          system development 5290
            nervous system development 2718
              central nervous system development 1266
                brain development 972
                  hindbrain development 218
                    metencephalon development 166
                      cerebellum development + 153
                      pons development + 14
paths to the root