ONTOLOGY REPORT - ANNOTATIONS |
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Term: | metencephalon development |
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Accession: | GO:0022037
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browse the term
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Definition: | The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure. |
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Kat2a |
lysine acetyltransferase 2A |
acts_upstream_of_or_within |
ISO |
MGI:3711317 (MGI:3709911|PMID:17325035) |
RGD |
PMID:17325035 |
MGI:3709911 |
NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
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Otx1 |
orthodenticle homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:97451 (MGI:4848254|PMID:20816794) |
RGD |
PMID:20816794 |
MGI:4848254 |
NCBI chr14:96,082,151...96,089,161
Ensembl chr14:96,082,151...96,089,086
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Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:97450 (MGI:4848254|PMID:20816794) |
RGD |
PMID:20816794 |
MGI:4848254 |
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
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Wnt1 |
Wnt family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857490 (MGI:59176|PMID:2205396) |
RGD |
PMID:2205396 |
MGI:59176 |
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
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Atf2 |
activating transcription factor 2 |
involved_in |
ISO |
MGI:3720850 (MGI:5007596|PMID:21533046) |
RGD |
PMID:21533046 |
MGI:5007596 |
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
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Agtr2 |
angiotensin II receptor, type 2 |
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IMP |
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RGD |
PMID:19682991 |
RGD:6903898 |
NCBI chr X:112,119,673...112,124,060
Ensembl chr X:112,120,228...112,124,057
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Cdk5 |
cyclin-dependent kinase 5 |
acts_upstream_of_or_within |
ISO |
MGI:1861809 (MGI:1889058|PMID:8855328) |
RGD |
PMID:8855328 |
MGI:1889058 |
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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Clp1 |
cleavage factor polyribonucleotide kinase subunit 1 |
involved_in |
ISO ISS |
(PMID:24766809), (PMID:24766810) (MGI:5568133|PMID:24766809) GO_REF:0000024 |
RGD UniProt |
PMID:24766809 PMID:24766810 |
GO_REF:0000024 MGI:5568133 |
NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421
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Dixdc1 |
DIX domain containing 1 |
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IMP |
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RGD |
PMID:19339625 |
RGD:2308917 |
NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
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Ezh2 |
enhancer of zeste 2 polycomb repressive complex 2 subunit |
acts_upstream_of_or_within |
ISO |
MGI:2661097 (MGI:4833736|PMID:20798045) |
RGD |
PMID:20798045 |
MGI:4833736 |
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
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Kif14 |
kinesin family member 14 |
involved_in |
ISO |
(MGI:5485315|PMID:23308235) |
RGD |
PMID:23308235 |
MGI:5485315 |
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
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Nav2 |
neuron navigator 2 |
involved_in |
ISO |
(MGI:5050602|PMID:21419114) |
RGD |
PMID:21419114 |
MGI:5050602 |
NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337
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Neurod2 |
neuronal differentiation 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3621523|PMID:16504944) |
UniProt RGD |
PMID:16504944 |
GO_REF:0000024 MGI:3621523 |
NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
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Ogdh |
oxoglutarate dehydrogenase |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:16901643) (MGI:3662936|PMID:16901643) |
RGD |
PMID:16901643 |
MGI:3662936 |
NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
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Cdk5 |
cyclin-dependent kinase 5 |
acts_upstream_of_or_within |
ISO |
MGI:1861809 (MGI:1340775|PMID:10407039) |
RGD |
PMID:10407039 |
MGI:1340775 |
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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Map2k1 |
mitogen activated protein kinase kinase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:99511 (MGI:5545830|PMID:24431450) |
Ensembl RGD |
PMID:24431450 |
GO_REF:0000107 MGI:5545830 |
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
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Ptpn11 |
protein tyrosine phosphatase, non-receptor type 11 |
acts_upstream_of_or_within |
ISO |
MGI:1346866|MGI:4868451 (MGI:5545830|PMID:24431450) |
RGD |
PMID:24431450 |
MGI:5545830 |
NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
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Gli1 |
GLI family zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:95728 (MGI:3624180|PMID:16571625) |
RGD |
PMID:16571625 |
MGI:3624180 |
NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
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Gli2 |
GLI family zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:2446434|MGI:3664541|MGI:95727 (MGI:3624180|PMID:16571625) |
RGD |
PMID:16571625 |
MGI:3624180 |
NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
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Nfix |
nuclear factor I X |
acts_upstream_of_or_within |
ISO |
MGI:3802571 (MGI:6459592|PMID:30503862) |
RGD |
PMID:30503862 |
MGI:6459592 |
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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Pcnt |
pericentrin |
acts_upstream_of_or_within |
ISO |
MGI:3799303 (MGI:4438783|PMID:20096683) |
RGD |
PMID:20096683 |
MGI:4438783 |
NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
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Rfx4 |
regulatory factor X4 |
acts_upstream_of_or_within |
ISO |
(MGI:2669568|PMID:12925582) |
RGD |
PMID:12925582 |
MGI:2669568 |
NCBI chr 7:18,853,065...19,015,378
Ensembl chr 7:18,853,322...19,014,967
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Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2176173|MGI:2176256 (MGI:3624180|PMID:16571625) |
Ensembl RGD |
PMID:16571625 |
GO_REF:0000107 MGI:3624180 |
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
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Trnp1 |
TMF1-regulated nuclear protein 1 |
involved_in |
ISO |
(MGI:5490679|PMID:23622239) |
RGD |
PMID:23622239 |
MGI:5490679 |
NCBI chr 5:145,706,427...145,713,279
Ensembl chr 5:145,706,094...145,713,272
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Tuba1a |
tubulin, alpha 1A |
involved_in |
ISO |
MGI:3617352 (MGI:3697948|PMID:17218254) |
RGD |
PMID:17218254 |
MGI:3697948 |
NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
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Usp9x |
ubiquitin specific peptidase 9, X-linked |
acts_upstream_of_or_within |
ISO |
MGI:5438072 (MGI:5532214|PMID:23861879) |
RGD |
PMID:23861879 |
MGI:5532214 |
NCBI chr X:9,588,825...9,726,993
Ensembl chr X:9,588,825...9,696,711
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Faim2 |
Fas apoptotic inhibitory molecule 2 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:5295128|PMID:21957071) |
UniProt Ensembl RGD |
PMID:21957071 |
GO_REF:0000024 GO_REF:0000107 MGI:5295128 |
NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
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Mdk |
midkine |
involved_in |
ISO |
(MGI:2178952|PMID:10096022) |
RGD |
PMID:10096022 |
MGI:2178952 |
NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
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Ttbk2 |
tau tubulin kinase 2 |
involved_in |
ISO |
(MGI:5700621|PMID:26323690) |
RGD |
PMID:26323690 |
MGI:5700621 |
NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
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Cend1 |
cell cycle exit and neuronal differentiation 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:4831137 (MGI:4830814|PMID:20153830) |
RGD |
PMID:20153830 PMID:21873635 |
MGI:4830814, RGD:13792537 |
NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302
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Serpine2 |
serpin family E member 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2387774 (MGI:3709698|PMID:17409116) |
Ensembl RGD |
PMID:17409116 |
GO_REF:0000107 MGI:3709698 |
NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
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Kif14 |
kinesin family member 14 |
involved_in |
ISO |
(MGI:5485315|PMID:23308235) |
RGD |
PMID:23308235 |
MGI:5485315 |
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
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Atp2b2 |
ATPase plasma membrane Ca2+ transporting 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857876 (MGI:1275896|PMID:9668038) |
RGD |
PMID:9668038 |
MGI:1275896 |
NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
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Cbln1 |
cerebellin 1 precursor |
involved_in |
ISS ISO |
GO_REF:0000024 UniProtKB:Q61625 (MGI:4839424|PMID:20537373) |
BHF-UCL RGD |
PMID:20537373 |
GO_REF:0000024 MGI:4839424 |
NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
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Grid2 |
glutamate ionotropic receptor delta type subunit 2 |
involved_in |
ISS ISO |
GO_REF:0000024 UniProtKB:Q9R171 (MGI:4839424|PMID:20537373) |
BHF-UCL RGD |
PMID:20537373 |
GO_REF:0000024 MGI:4839424 |
NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
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Kndc1 |
kinase non-catalytic C-lobe domain containing 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3769586|PMID:17984326) |
RGD |
PMID:17984326 |
MGI:3769586 |
NCBI chr 1:194,689,962...194,738,353
Ensembl chr 1:194,690,135...194,738,362
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Mtpn |
myotrophin |
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IEP |
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RGD |
PMID:8144589 |
RGD:632797 |
NCBI chr 4:64,159,273...64,186,686
Ensembl chr 4:64,157,641...64,186,724
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Nfix |
nuclear factor I X |
acts_upstream_of_or_within involved_in |
ISO |
MGI:3802571 (MGI:5436217|PMID:21800304) MGI:3802571 (MGI:5612951|PMID:23042739) |
RGD |
PMID:21800304 PMID:23042739 |
MGI:5436217 MGI:5612951 |
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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Nrxn1 |
neurexin 1 |
involved_in |
ISS ISO |
GO_REF:0000024 UniProtKB:Q61625|UniProtKB:Q9R171 (MGI:4839424|PMID:20537373) |
BHF-UCL RGD |
PMID:20537373 |
GO_REF:0000024 MGI:4839424 |
NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
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Ophn1 |
oligophrenin 1 |
involved_in |
ISO |
(PMID:27160703) |
RGD |
PMID:27160703 |
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NCBI chr X:63,599,746...63,976,678
Ensembl chr X:63,603,042...63,976,633
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Prox1 |
prospero homeobox 1 |
involved_in |
ISO |
(MGI:4849596|PMID:20808958) |
RGD |
PMID:20808958 |
MGI:4849596 |
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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Top2a |
DNA topoisomerase II alpha |
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IEP |
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RGD |
PMID:11170002 |
RGD:8693630 |
NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
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Ulk1 |
unc-51 like autophagy activating kinase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:1351063|PMID:10624947) |
RGD |
PMID:10624947 |
MGI:1351063 |
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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Wnt7a |
Wnt family member 7A |
acts_upstream_of_or_within |
ISO |
(MGI:1195230|PMID:9405095) |
RGD |
PMID:9405095 |
MGI:1195230 |
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
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Cacna1a |
calcium voltage-gated channel subunit alpha1 A |
acts_upstream_of_or_within |
ISO |
MGI:1856209|MGI:1856210 (MGI:70349|PMID:7697385) |
RGD |
PMID:7697385 |
MGI:70349 |
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
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Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5504540|PMID:23688253) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:23688253 |
GO_REF:0000024 GO_REF:0000107 MGI:5504540 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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Zfp365 |
zinc finger protein 365 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5559035|PMID:23912123) |
UniProt RGD |
PMID:23912123 |
GO_REF:0000024 MGI:5559035 |
NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238
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Crk |
CRK proto-oncogene, adaptor protein |
acts_upstream_of_or_within |
ISO |
MGI:104686 (MGI:3822695|PMID:19074029) |
RGD |
PMID:19074029 |
MGI:3822695 |
NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
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Crkl |
CRK like proto-oncogene, adaptor protein |
acts_upstream_of_or_within |
ISO |
MGI:88508 (MGI:3822695|PMID:19074029) |
RGD |
PMID:19074029 |
MGI:3822695 |
NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
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Nanos1 |
nanos C2HC-type zinc finger 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5703669|PMID:26609159) |
RGD |
PMID:26609159 |
MGI:5703669 |
NCBI chr 1:259,897,659...259,901,501
Ensembl chr 1:259,897,939...259,898,730
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Samd4b |
sterile alpha motif domain containing 4B |
acts_upstream_of_or_within |
ISO |
(MGI:5703669|PMID:26609159) |
RGD |
PMID:26609159 |
MGI:5703669 |
NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853
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Agtpbp1 |
ATP/GTP binding carboxypeptidase 1 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:1856535|MGI:1857523|MGI:2443047|MGI:6270378 (MGI:1347769|PMID:10630211), (MGI:6269036|PMID:30420556) (MGI:2159417|PMID:11884758), (MGI:3614720|PMID:16465590), (MGI:4849873|PMID:21074048) |
RGD |
PMID:10630211 PMID:11884758 PMID:16465590 PMID:21074048 PMID:30420556 |
MGI:1347769 MGI:2159417 MGI:3614720 MGI:4849873 MGI:6269036 |
NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
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Atp2b2 |
ATPase plasma membrane Ca2+ transporting 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857876 (MGI:1275896|PMID:9668038) |
RGD |
PMID:9668038 |
MGI:1275896 |
NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
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Atp7a |
ATPase copper transporting alpha |
acts_upstream_of_or_within |
ISO |
MGI:1856466 (MGI:71790|PMID:2473662) |
RGD |
PMID:2473662 |
MGI:71790 |
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
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Atxn2 |
ataxin 2 |
acts_upstream_of_or_within |
ISO |
MGI:3505741 (MGI:3510013|PMID:10973246) |
RGD |
PMID:10973246 |
MGI:3510013 |
NCBI chr12:34,754,132...34,851,175
Ensembl chr12:34,754,137...34,851,479
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Cacna1a |
calcium voltage-gated channel subunit alpha1 A |
acts_upstream_of_or_within |
ISO |
MGI:1856209|MGI:1856210 (MGI:1347769|PMID:10630211), (MGI:62667|PMID:1306163), (MGI:68980|PMID:7834360) |
RGD |
PMID:1306163 PMID:7834360 PMID:10630211 |
MGI:1347769 MGI:62667 MGI:68980 |
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
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Cend1 |
cell cycle exit and neuronal differentiation 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:4831137 (MGI:4830814|PMID:20153830) PMID:21873635 |
RGD |
PMID:20153830 PMID:21873635 |
MGI:4830814, RGD:13792537 |
NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302
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Faim2 |
Fas apoptotic inhibitory molecule 2 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:5295128|PMID:21957071) |
UniProt Ensembl RGD |
PMID:21957071 |
GO_REF:0000024 GO_REF:0000107 MGI:5295128 |
NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
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Foxp2 |
forkhead box P2 |
involved_in |
ISO |
MGI:3778383 (MGI:5306536|PMID:22133810) |
RGD |
PMID:22133810 |
MGI:5306536 |
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
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Herc1 |
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:3613033 (MGI:4461108|PMID:20041218) |
RGD |
PMID:20041218 |
MGI:4461108 |
NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
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Ldb1 |
LIM domain binding 1 |
acts_upstream_of_or_within |
ISO |
MGI:3719683 (MGI:3718715|PMID:17664423) |
RGD |
PMID:17664423 |
MGI:3718715 |
NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
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Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:107792 (MGI:3718715|PMID:17664423) |
UniProt RGD |
PMID:17664423 |
GO_REF:0000024 MGI:3718715 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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G |
Lhx5 |
LIM homeobox 5 |
acts_upstream_of_or_within |
ISO |
MGI:99783 (MGI:3718715|PMID:17664423) |
RGD |
PMID:17664423 |
MGI:3718715 |
NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
|
|
G |
Psap |
prosaposin |
acts_upstream_of_or_within |
ISO |
MGI:3521746 (MGI:3512714|PMID:15345707) |
RGD |
PMID:15345707 |
MGI:3512714 |
NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
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|
G |
Rora |
RAR-related orphan receptor A |
acts_upstream_of_or_within |
ISO |
MGI:1857035 (MGI:86446|PMID:8996814) |
RGD |
PMID:8996814 |
MGI:86446 |
NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
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|
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Skor2 |
SKI family transcriptional corepressor 2 |
acts_upstream_of_or_within |
ISO |
MGI:5300464 (MGI:5300220|PMID:21937600), (MGI:5565016|PMID:24491816) |
RGD |
PMID:21937600 PMID:24491816 |
MGI:5300220 MGI:5565016 |
NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342
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Slc25a46 |
solute carrier family 25, member 46 |
acts_upstream_of_or_within |
ISO |
MGI:6358090 (MGI:5921109|PMID:28934388) |
RGD |
PMID:28934388 |
MGI:5921109 |
NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314
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G |
Top2a |
DNA topoisomerase II alpha |
|
IEP |
|
RGD |
PMID:11170002 |
RGD:8693630 |
NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
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|
G |
Ttc21b |
tetratricopeptide repeat domain 21B |
acts_upstream_of_or_within |
ISO |
MGI:2137515|MGI:2152544|MGI:2179048|MGI:5587034 (MGI:6152587|PMID:29615573) |
RGD |
PMID:29615573 |
MGI:6152587 |
NCBI chr 3:50,861,367...50,935,782
Ensembl chr 3:50,861,367...50,935,903
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G |
Ttll1 |
TTL family tubulin polyglutamylase complex subunit L1 |
acts_upstream_of_or_within |
ISO |
MGI:1918244 (MGI:6269036|PMID:30420556) |
RGD |
PMID:30420556 |
MGI:6269036 |
NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761
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G |
Aars1 |
alanyl-tRNA synthetase 1 |
acts_upstream_of_or_within |
ISO |
MGI:3618596 (MGI:3640843|PMID:16906134) |
RGD |
PMID:16906134 |
MGI:3640843 |
NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147
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|
G |
Agtpbp1 |
ATP/GTP binding carboxypeptidase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
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G |
Atg7 |
autophagy related 7 |
acts_upstream_of_or_within |
ISO |
MGI:2386545|MGI:3587769 (MGI:3630371|PMID:16625205), (MGI:4829568|PMID:20577052) |
RGD |
PMID:16625205 PMID:20577052 |
MGI:3630371 MGI:4829568 |
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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B4galt2 |
beta-1,4-galactosyltransferase 2 |
acts_upstream_of_or_within |
ISO |
MGI:3849305 (MGI:3849110|PMID:19265195) |
RGD |
PMID:19265195 |
MGI:3849110 |
NCBI chr 5:131,412,541...131,422,573
Ensembl chr 5:131,412,541...131,421,013
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G |
Cacna1a |
calcium voltage-gated channel subunit alpha1 A |
acts_upstream_of_or_within |
ISO |
MGI:1856209|MGI:1856210 (MGI:62667|PMID:1306163) |
RGD |
PMID:1306163 |
MGI:62667 |
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
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|
G |
Faim2 |
Fas apoptotic inhibitory molecule 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5295128|PMID:21957071) |
UniProt RGD |
PMID:21957071 |
GO_REF:0000024 MGI:5295128 |
NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
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G |
Hspa5 |
heat shock protein family A (Hsp70) member 5 |
involved_in |
ISO |
(MGI:4437543|PMID:19816510) |
RGD |
PMID:19816510 |
MGI:4437543 |
NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
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G |
Klhl1 |
kelch-like family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:3664534|MGI:3664543 (MGI:3664006|PMID:17005861) |
RGD |
PMID:17005861 |
MGI:3664006 |
NCBI chr15:72,698,188...73,142,707
Ensembl chr15:72,699,094...73,142,594
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G |
Myh10 |
myosin heavy chain 10 |
acts_upstream_of_or_within |
ISO |
MGI:3664765 (MGI:3656460|PMID:16481398) |
RGD |
PMID:16481398 |
MGI:3656460 |
NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
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G |
Naglu |
N-acetyl-alpha-glucosaminidase |
acts_upstream_of_or_within |
ISO |
MGI:1934018 (MGI:3769195|PMID:17712420) |
RGD |
PMID:17712420 |
MGI:3769195 |
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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G |
Nfix |
nuclear factor I X |
acts_upstream_of_or_within |
ISO |
MGI:3802571 (MGI:5436217|PMID:21800304) |
RGD |
PMID:21800304 |
MGI:5436217 |
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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G |
Sez6 |
seizure related 6 homolog |
acts_upstream_of_or_within |
ISO |
MGI:1935121|MGI:2385295 (MGI:3654399|PMID:16814779) |
RGD |
PMID:16814779 |
MGI:3654399 |
NCBI chr10:62,818,931...62,868,686
Ensembl chr10:62,819,069...62,868,671
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G |
Sez6l |
seizure related 6 homolog like |
acts_upstream_of_or_within |
ISO |
MGI:104745|MGI:2385295 (MGI:3654399|PMID:16814779) |
RGD |
PMID:16814779 |
MGI:3654399 |
NCBI chr12:44,064,628...44,221,815
Ensembl chr12:44,064,935...44,219,663
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G |
Sez6l2 |
seizure related 6 homolog like 2 |
acts_upstream_of_or_within |
ISO |
MGI:104745|MGI:1935121 (MGI:3654399|PMID:16814779) |
RGD |
PMID:16814779 |
MGI:3654399 |
NCBI chr 1:181,557,109...181,577,456
Ensembl chr 1:181,557,109...181,577,456
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G |
Uqcrq |
ubiquinol-cytochrome c reductase, complex III subunit VII |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:16901643) (MGI:3662936|PMID:16901643) |
RGD |
PMID:16901643 |
MGI:3662936 |
NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
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G |
Gba |
glucosylceramidase beta |
acts_upstream_of_or_within |
ISO |
(MGI:3762988|PMID:17954912) |
RGD |
PMID:17954912 |
MGI:3762988 |
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
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G |
Whrn |
whirlin |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:5516521|PMID:24011083) |
Ensembl RGD |
PMID:24011083 |
GO_REF:0000107 MGI:5516521 |
NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
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G |
Arcn1 |
archain 1 |
acts_upstream_of_or_within |
ISO |
MGI:2671790 (MGI:4454933|PMID:20502676) |
RGD |
PMID:20502676 |
MGI:4454933 |
NCBI chr 8:45,057,617...45,082,224
Ensembl chr 8:45,057,619...45,082,247
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|
G |
Rere |
arginine-glutamic acid dipeptide repeats |
acts_upstream_of_or_within |
ISO |
MGI:3577419 (MGI:5582020|PMID:24466353) |
RGD |
PMID:24466353 |
MGI:5582020 |
NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
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G |
Atp2b2 |
ATPase plasma membrane Ca2+ transporting 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857876 (MGI:3709537|PMID:17409239) |
RGD |
PMID:17409239 |
MGI:3709537 |
NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
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G |
Cntnap2 |
contactin associated protein 2 |
involved_in |
ISO |
(MGI:6477849|PMID:32675284) |
RGD |
PMID:32675284 |
MGI:6477849 |
NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
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G |
Coq8b |
coenzyme Q8B |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:27499294) |
UniProt RGD |
PMID:27499294 |
GO_REF:0000024 |
NCBI chr 1:82,525,578...82,549,182
Ensembl chr 1:82,526,568...82,549,180
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G |
Sptbn2 |
spectrin, beta, non-erythrocytic 2 |
acts_upstream_of_or_within |
ISO |
MGI:4127354 (MGI:4438955|PMID:20231455) |
RGD |
PMID:20231455 |
MGI:4438955 |
NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
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G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5504540|PMID:23688253) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:23688253 |
GO_REF:0000024 GO_REF:0000107 MGI:5504540 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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G |
Kif14 |
kinesin family member 14 |
involved_in |
ISO |
(MGI:5485315|PMID:23308235) |
RGD |
PMID:23308235 |
MGI:5485315 |
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
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G |
Abat |
4-aminobutyrate aminotransferase |
|
IEP |
|
RGD |
PMID:7182074 |
RGD:10047093 |
NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
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G |
Acvr1c |
activin A receptor type 1C |
|
IEP |
|
RGD |
PMID:8940033 |
RGD:631880 |
NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
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G |
Agtpbp1 |
ATP/GTP binding carboxypeptidase 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856535 (MGI:71424|PMID:7891151) |
RGD |
PMID:7891151 |
MGI:71424 |
NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
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G |
Aif1 |
allograft inflammatory factor 1 |
|
IEP |
|
RGD |
PMID:9698327 |
RGD:704401 |
NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
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G |
Ak1 |
adenylate kinase 1 |
|
IEP |
|
RGD |
PMID:9920788 |
RGD:632499 |
NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041
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G |
Ak3 |
adenylate kinase 3 |
|
IEP |
|
RGD |
PMID:9920788 |
RGD:632499 |
NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625
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G |
Amigo2 |
adhesion molecule with Ig like domain 2 |
|
IEP |
|
RGD |
PMID:12843293 |
RGD:1299593 |
NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695
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|
G |
Arhgap32 |
Rho GTPase activating protein 32 |
|
IEP |
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454
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G |
Atic |
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase |
|
IEP |
|
RGD |
PMID:7057182 |
RGD:2301991 |
NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
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G |
Atp2b2 |
ATPase plasma membrane Ca2+ transporting 2 |
acts_upstream_of_or_within |
ISO |
MGI:3664103 (MGI:3654591|PMID:16880690) |
RGD |
PMID:16880690 |
MGI:3654591 |
NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
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G |
Atrn |
attractin |
acts_upstream_of_or_within |
ISO |
MGI:1856082 (MGI:3771742|PMID:18064672) |
RGD |
PMID:18064672 |
MGI:3771742 |
NCBI chr 3:118,110,320...118,244,326
Ensembl chr 3:118,110,229...118,244,322
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G |
Ccr1 |
C-C motif chemokine receptor 1 |
|
IEP |
|
RGD |
PMID:12541321 |
RGD:5688179 |
NCBI chr 8:123,556,286...123,561,841
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G |
Cd3e |
CD3 epsilon subunit of T-cell receptor complex |
involved_in |
ISO |
(MGI:3718938|PMID:17502348) |
RGD |
PMID:17502348 |
MGI:3718938 |
NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022
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|
G |
Cdk5 |
cyclin-dependent kinase 5 |
acts_upstream_of_or_within |
ISO |
MGI:1861809 (MGI:1931637|PMID:11226314) |
RGD |
PMID:11226314 |
MGI:1931637 |
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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G |
Cdk5r1 |
cyclin-dependent kinase 5 regulatory subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:1330828|MGI:2680652 (MGI:1931637|PMID:11226314), (MGI:2149271|PMID:11517264) |
RGD |
PMID:11226314 PMID:11517264 |
MGI:1931637 MGI:2149271 |
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
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G |
Cdk5r2 |
cyclin-dependent kinase 5 regulatory subunit 2 |
acts_upstream_of_or_within |
ISO |
MGI:101764 (MGI:2149271|PMID:11517264) |
RGD |
PMID:11517264 |
MGI:2149271 |
NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
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G |
Cdkn2a |
cyclin-dependent kinase inhibitor 2A |
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IEP |
|
RGD |
PMID:9693786 |
RGD:8552681 |
NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
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G |
Ckb |
creatine kinase B |
|
IEP |
|
RGD |
PMID:12093362 |
RGD:625711 |
NCBI chr 6:130,729,420...130,732,301
Ensembl chr 6:130,729,423...130,732,315
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G |
Ckmt1 |
creatine kinase, mitochondrial 1 |
|
IEP |
|
RGD |
PMID:12093362 |
RGD:625711 |
NCBI chr 3:108,329,859...108,335,760
Ensembl chr 3:108,330,705...108,335,758
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G |
Cntn1 |
contactin 1 |
acts_upstream_of_or_within |
ISO |
MGI:3043422 (MGI:3778100|PMID:18354028) |
RGD |
PMID:18354028 |
MGI:3778100 |
NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541
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G |
Cntnap2 |
contactin associated protein 2 |
involved_in |
ISO |
(MGI:6477849|PMID:32675284) |
RGD |
PMID:32675284 |
MGI:6477849 |
NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
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G |
Cplane1 |
ciliogenesis and planar polarity effector complex subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:5297398 (MGI:5648689|PMID:25877302) |
RGD |
PMID:25877302 |
MGI:5648689 |
NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500
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G |
Crhr2 |
corticotropin releasing hormone receptor 2 |
|
IEP |
|
RGD |
PMID:16820012 |
RGD:5131267 |
NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
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G |
Cyp11a1 |
cytochrome P450, family 11, subfamily a, polypeptide 1 |
|
IEP |
|
RGD |
PMID:16329132 |
RGD:1599699 |
NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
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G |
En1 |
engrailed homeobox 1 |
involved_in |
ISO |
UniProtKB:P04426 (MGI:82938|PMID:8848044) |
RGD |
PMID:8848044 |
MGI:82938 |
NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
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G |
Enpp1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
|
IEP |
|
RGD |
PMID:18565716 |
RGD:13204724 |
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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G |
Esr2 |
estrogen receptor 2 |
|
IEP |
|
RGD |
PMID:16542644 |
RGD:1601098 |
NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
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|
G |
Faim2 |
Fas apoptotic inhibitory molecule 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5295128|PMID:21957071) |
UniProt RGD |
PMID:21957071 |
GO_REF:0000024 MGI:5295128 |
NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
|
|
G |
Fcgr2b |
Fc gamma receptor 2B |
involved_in |
ISO |
(MGI:3718938|PMID:17502348) |
RGD |
PMID:17502348 |
MGI:3718938 |
NCBI chr13:83,191,253...83,207,776
Ensembl chr13:83,193,163...83,207,778
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|
G |
Foxc1 |
forkhead box C1 |
involved_in |
ISO |
(MGI:4359553|PMID:19668217) |
RGD |
PMID:19668217 |
MGI:4359553 |
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
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|
G |
Foxp2 |
forkhead box P2 |
acts_upstream_of_or_within |
ISO |
MGI:3584266|MGI:3723630 (MGI:3584080|PMID:15983371), (MGI:3723373|PMID:17619227) |
RGD |
PMID:15983371 PMID:17619227 |
MGI:3584080 MGI:3723373 |
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
|
|
G |
Gabrb3 |
gamma-aminobutyric acid type A receptor subunit beta 3 |
acts_upstream_of_or_within |
ISO |
(MGI:3771408|PMID:17983671) |
RGD |
PMID:17983671 |
MGI:3771408 |
NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
|
|
G |
Gart |
phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase |
|
IEP |
|
RGD |
PMID:7057182 |
RGD:2301991 |
NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
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G |
Gbx2 |
gastrulation brain homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857634 (MGI:3624192|PMID:16651541) |
RGD |
PMID:16651541 |
MGI:3624192 |
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
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G |
Gdf10 |
growth differentiation factor 10 |
|
IEP |
|
RGD |
PMID:8605043 |
RGD:631791 |
NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343
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G |
Glud1 |
glutamate dehydrogenase 1 |
|
IEP |
|
RGD |
PMID:7182074 |
RGD:10047093 |
NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957
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|
G |
Hap1 |
huntingtin-associated protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3814764|PMID:18636121) |
Ensembl RGD |
PMID:18636121 |
GO_REF:0000107 MGI:3814764 |
NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
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G |
Hnrnpd |
heterogeneous nuclear ribonucleoprotein D |
|
IEP |
|
RGD |
PMID:19115409 |
RGD:10041070 |
NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
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G |
Hnrnpk |
heterogeneous nuclear ribonucleoprotein K |
|
IEP |
|
RGD |
PMID:22102872 |
RGD:10002783 |
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
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G |
Hspa8 |
heat shock protein family A (Hsp70) member 8 |
|
IEP |
|
RGD |
PMID:9764759 |
RGD:10059383 |
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
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G |
Igf1r |
insulin-like growth factor 1 receptor |
|
IEP IMP |
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RGD |
PMID:23397157 PMID:21443795 |
RGD:10403039, RGD:12904969 |
NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
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G |
Insr |
insulin receptor |
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IEP |
|
RGD |
PMID:23397157 |
RGD:10403039 |
NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
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G |
Kcnc1 |
potassium voltage-gated channel subfamily C member 1 |
|
IEP |
|
RGD |
PMID:9526005 |
RGD:9685724 |
NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744
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G |
Ldb1 |
LIM domain binding 1 |
acts_upstream_of_or_within |
ISO |
MGI:3719683 (MGI:3718715|PMID:17664423) |
RGD |
PMID:17664423 |
MGI:3718715 |
NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
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G |
Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:107792 (MGI:3718715|PMID:17664423) |
UniProt RGD |
PMID:17664423 |
GO_REF:0000024 MGI:3718715 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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G |
Lhx5 |
LIM homeobox 5 |
acts_upstream_of_or_within |
ISO |
MGI:99783 (MGI:3718715|PMID:17664423) |
RGD |
PMID:17664423 |
MGI:3718715 |
NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
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G |
Lmx1a |
LIM homeobox transcription factor 1 alpha |
acts_upstream_of_or_within |
ISO |
MGI:1888413 (MGI:49987|PMID:1638738) |
RGD |
PMID:1638738 |
MGI:49987 |
NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
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G |
Lpar1 |
lysophosphatidic acid receptor 1 |
|
IEP |
|
RGD |
PMID:9753172 |
RGD:2317716 |
NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
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G |
Mecp2 |
methyl CpG binding protein 2 |
acts_upstream_of_or_within |
IEP ISO |
MGI:2158354 (MGI:3807442|PMID:18571096) |
RGD |
PMID:18571096 PMID:14751287 |
MGI:3807442, RGD:12743658 |
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
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G |
Mt-co1 |
mitochondrially encoded cytochrome c oxidase I |
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IEP |
|
RGD |
PMID:2465379 |
RGD:2302317 |
NCBI chr MT:5,323...6,867
Ensembl chr MT:5,323...6,867
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G |
Mt-nd4 |
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 |
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IEP |
|
RGD |
PMID:2465379 |
RGD:2302317 |
NCBI chr MT:10,160...11,537
Ensembl chr MT:10,160...11,537
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G |
Myo16 |
myosin XVI |
involved_in |
IEP |
PMID:11588169 |
HGNC-UCL |
PMID:11588169 |
RGD:633234 |
NCBI chr16:78,884,405...79,364,445
Ensembl chr16:78,884,406...79,248,388
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G |
Ncoa1 |
nuclear receptor coactivator 1 |
|
IEP |
|
RGD |
PMID:10803578 PMID:15876152 |
RGD:2293531, RGD:5688232 |
NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
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G |
Ncoa2 |
nuclear receptor coactivator 2 |
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IEP |
|
RGD |
PMID:10803578 |
RGD:2293531 |
NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451
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G |
Ncoa3 |
nuclear receptor coactivator 3 |
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IEP |
|
RGD |
PMID:10803578 |
RGD:2293531 |
NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
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G |
Ncor1 |
nuclear receptor co-repressor 1 |
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IEP |
|
RGD |
PMID:10803578 |
RGD:2293531 |
NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
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G |
Ncor2 |
nuclear receptor co-repressor 2 |
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IEP |
|
RGD |
PMID:10803578 |
RGD:2293531 |
NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
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G |
Ncstn |
nicastrin |
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IEP |
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RGD |
PMID:16298244 |
RGD:13801190 |
NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
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G |
Neurod1 |
neuronal differentiation 1 |
involved_in |
IEP ISO |
(MGI:2159022|PMID:10398678) |
RGD |
PMID:10398678 PMID:12242038 |
MGI:2159022, RGD:1625048 |
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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G |
Nfix |
nuclear factor I X |
acts_upstream_of_or_within |
ISO |
MGI:3802571 (MGI:5436217|PMID:21800304) |
RGD |
PMID:21800304 |
MGI:5436217 |
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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G |
Nr2c2 |
nuclear receptor subfamily 2, group C, member 2 |
involved_in |
ISO |
(MGI:5285161|PMID:20393820) |
RGD |
PMID:20393820 |
MGI:5285161 |
NCBI chr 4:124,610,216...124,666,813
Ensembl chr 4:124,608,960...124,661,902
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G |
Ntm |
neurotrimin |
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IEP |
|
RGD |
PMID:12373100 |
RGD:2314481 |
NCBI chr 8:27,376,582...28,366,604
Ensembl chr 8:27,377,773...28,366,595
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G |
Pak1 |
p21 (RAC1) activated kinase 1 |
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IEP |
|
RGD |
PMID:20395366 |
RGD:11533946 |
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
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G |
Pax6 |
paired box 6 |
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IEP |
|
RGD |
PMID:11688562 |
RGD:8552644 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Pdss2 |
decaprenyl diphosphate synthase subunit 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5304241|PMID:21871565) |
UniProt RGD |
PMID:21871565 |
GO_REF:0000024 MGI:5304241 |
NCBI chr20:46,709,631...46,938,704
Ensembl chr20:46,709,649...46,938,708
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G |
Pfdn1 |
prefoldin subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:3800373 (MGI:3799445|PMID:18566413) |
RGD |
PMID:18566413 |
MGI:3799445 |
NCBI chr18:28,014,145...28,067,148
Ensembl chr18:28,014,145...28,067,064
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G |
Ppargc1a |
PPARG coactivator 1 alpha |
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IEP |
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RGD |
PMID:17335037 |
RGD:10059646 |
NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
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G |
Prkg1 |
protein kinase cGMP-dependent 1 |
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IEP |
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RGD |
PMID:15763176 |
RGD:7777107 |
NCBI chr 1:228,409,883...229,638,794
Ensembl chr 1:228,408,947...229,639,080
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G |
Psen1 |
presenilin 1 |
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IEP |
|
RGD |
PMID:16298244 |
RGD:13801190 |
NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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G |
Ptbp2 |
polypyrimidine tract binding protein 2 |
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IEP |
|
RGD |
PMID:9917071 |
RGD:10045971 |
NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
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G |
Ptf1a |
pancreas associated transcription factor 1a |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3703683|PMID:15543146) (PMID:15543146) |
UniProt RGD |
PMID:15543146 |
GO_REF:0000024 MGI:3703683 |
NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
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G |
Ptn |
pleiotrophin |
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IEP |
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RGD |
PMID:8653419 |
RGD:10043831 |
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
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G |
Ptprs |
protein tyrosine phosphatase, receptor type, S |
acts_upstream_of_or_within |
ISO |
MGI:2158734 (MGI:3614607|PMID:15842738) |
RGD |
PMID:15842738 |
MGI:3614607 |
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
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G |
Rere |
arginine-glutamic acid dipeptide repeats |
acts_upstream_of_or_within |
ISO |
MGI:3577419 (MGI:5582020|PMID:24466353) |
RGD |
PMID:24466353 |
MGI:5582020 |
NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
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G |
Rpgrip1l |
Rpgrip1-like |
acts_upstream_of_or_within |
ISO |
MGI:3716208 (MGI:3716248|PMID:17558409) |
RGD |
PMID:17558409 |
MGI:3716248 |
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
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G |
Scn5a |
sodium voltage-gated channel alpha subunit 5 |
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IEP |
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RGD |
PMID:22331407 |
RGD:6484221 |
NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
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G |
Sdf4 |
stromal cell derived factor 4 |
involved_in |
IEP |
PMID:18355758 |
BHF-UCL |
PMID:18355758 |
RGD:8554427 |
NCBI chr 5:166,586,581...166,606,661
Ensembl chr 5:166,586,390...166,604,521
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G |
Sema4c |
semaphorin 4C |
involved_in |
ISO |
(MGI:4881530|PMID:21122816) |
RGD |
PMID:21122816 |
MGI:4881530 |
NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
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G |
Sstr1 |
somatostatin receptor 1 |
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IEP |
|
RGD |
PMID:9166718 |
RGD:2325007 |
NCBI chr 6:75,832,292...75,836,806
Ensembl chr 6:75,832,530...75,836,802
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G |
Sstr2 |
somatostatin receptor 2 |
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IEP |
|
RGD |
PMID:9166718 |
RGD:2325007 |
NCBI chr10:98,664,204...98,671,370
Ensembl chr10:98,664,216...98,674,351
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G |
Sstr3 |
somatostatin receptor 3 |
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IEP |
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RGD |
PMID:9166718 |
RGD:2325007 |
NCBI chr 7:110,092,563...110,109,043
Ensembl chr 7:110,092,575...110,099,769
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G |
Tp53 |
tumor protein p53 |
acts_upstream_of_or_within |
ISO |
(MGI:5511091|PMID:24013501) |
RGD |
PMID:24013501 |
MGI:5511091 |
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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G |
Ttbk2 |
tau tubulin kinase 2 |
involved_in |
ISO |
(MGI:5700621|PMID:26323690) |
RGD |
PMID:26323690 |
MGI:5700621 |
NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
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G |
Ttc21b |
tetratricopeptide repeat domain 21B |
acts_upstream_of_or_within |
ISO |
MGI:2152544|MGI:2179048|MGI:5587034 (MGI:6152587|PMID:29615573) |
RGD |
PMID:29615573 |
MGI:6152587 |
NCBI chr 3:50,861,367...50,935,782
Ensembl chr 3:50,861,367...50,935,903
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G |
Wnt1 |
Wnt family member 1 |
involved_in |
ISO |
(MGI:82938|PMID:8848044) |
RGD |
PMID:8848044 |
MGI:82938 |
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
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G |
Zbtb18 |
zinc finger and BTB domain containing 18 |
acts_upstream_of_or_within |
ISO |
MGI:3851929 (MGI:3851676|PMID:19409883) |
RGD |
PMID:19409883 |
MGI:3851676 |
NCBI chr13:89,439,633...89,447,958
Ensembl chr13:89,439,420...89,448,862
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G |
Wnt1 |
Wnt family member 1 |
involved_in |
ISO |
(MGI:1931348|PMID:2202907) |
RGD |
PMID:2202907 |
MGI:1931348 |
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
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G |
Cacna1a |
calcium voltage-gated channel subunit alpha1 A |
acts_upstream_of_or_within |
ISO |
MGI:2180190 (MGI:2179541|PMID:11344116) |
RGD |
PMID:11344116 |
MGI:2179541 |
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
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G |
Abl1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
MGI:87860 (MGI:4840122|PMID:20980600) |
RGD |
PMID:20980600 |
MGI:4840122 |
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
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G |
Abl2 |
ABL proto-oncogene 2, non-receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
MGI:87859 (MGI:4840122|PMID:20980600) |
RGD |
PMID:20980600 |
MGI:4840122 |
NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
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G |
Cbs |
cystathionine beta synthase |
acts_upstream_of_or_within |
ISO |
MGI:1857139 (MGI:3607901|PMID:16160063) |
RGD |
PMID:16160063 |
MGI:3607901 |
NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
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G |
Gas1 |
growth arrest-specific 1 |
acts_upstream_of_or_within |
ISO |
MGI:2388397 (MGI:2138056|PMID:11456442) |
RGD |
PMID:11456442 |
MGI:2138056 |
NCBI chr17:4,482,014...4,485,155
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G |
Gnpat |
glyceronephosphate O-acyltransferase |
acts_upstream_of_or_within |
ISO |
MGI:2670461 (MGI:3843561|PMID:19270340) |
RGD |
PMID:19270340 |
MGI:3843561 |
NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361
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G |
Lmx1b |
LIM homeobox transcription factor 1 beta |
acts_upstream_of_or_within |
ISO |
MGI:2158463 (MGI:3695500|PMID:17166916) |
RGD |
PMID:17166916 |
MGI:3695500 |
NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
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G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:2156191 (MGI:1891551|PMID:11029008) |
RGD |
PMID:11029008 |
MGI:1891551 |
NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
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G |
Skor2 |
SKI family transcriptional corepressor 2 |
acts_upstream_of_or_within |
ISO |
MGI:5300464 (MGI:5300220|PMID:21937600) |
RGD |
PMID:21937600 |
MGI:5300220 |
NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342
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|
G |
Xrcc1 |
X-ray repair cross complementing 1 |
involved_in |
ISO |
(MGI:5902647|PMID:28002403) |
RGD |
PMID:28002403 |
MGI:5902647 |
NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701
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|
G |
Dab1 |
DAB adaptor protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:1861918 (MGI:1098179|PMID:9338785) |
RGD |
PMID:9338785 |
MGI:1098179 |
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
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|
G |
Hspa5 |
heat shock protein family A (Hsp70) member 5 |
involved_in |
ISO |
(MGI:4437543|PMID:19816510) |
RGD |
PMID:19816510 |
MGI:4437543 |
NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
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|
|
G |
Fzd4 |
frizzled class receptor 4 |
involved_in |
ISO |
(MGI:3621833|PMID:15035989) |
RGD |
PMID:15035989 |
MGI:3621833 |
NCBI chr 1:143,280,065...143,288,799
Ensembl chr 1:143,280,065...143,285,724
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|
|
G |
Bcl2 |
BCL2, apoptosis regulator |
acts_upstream_of_or_within |
ISO |
MGI:1857134 (MGI:1891561|PMID:11027399) |
RGD |
PMID:11027399 |
MGI:1891561 |
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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G |
Scrib |
scribble planar cell polarity protein |
acts_upstream_of_or_within |
ISO |
MGI:2139764 (MGI:4439427|PMID:20215345) |
RGD |
PMID:20215345 |
MGI:4439427 |
NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
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|
G |
Sec24b |
SEC24 homolog B, COPII coat complex component |
acts_upstream_of_or_within |
ISO |
MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) |
RGD |
PMID:20215345 |
MGI:4439427 |
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
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|
G |
Slc4a7 |
solute carrier family 4 member 7 |
acts_upstream_of_or_within |
ISO |
MGI:2682641 (MGI:2680888|PMID:12808454) |
RGD |
PMID:12808454 |
MGI:2680888 |
NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
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G |
Atf2 |
activating transcription factor 2 |
involved_in |
ISO |
MGI:3720850 (MGI:5007596|PMID:21533046) |
RGD |
PMID:21533046 |
MGI:5007596 |
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
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G |
Hoxa1 |
homeobox A1 |
acts_upstream_of_or_within |
ISO |
MGI:1857504 (MGI:62658|PMID:8102800) |
RGD |
PMID:8102800 |
MGI:62658 |
NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
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G |
Hoxb1 |
homeo box B1 |
acts_upstream_of_or_within |
ISO |
MGI:1857824 (MGI:83677|PMID:8898234) |
RGD |
PMID:8898234 |
MGI:83677 |
NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836
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G |
Phox2a |
paired-like homeobox 2a |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2180328|MGI:4438118 (MGI:4849589|PMID:21068058), (MGI:86465|PMID:9115735) |
Ensembl RGD |
PMID:9115735 PMID:21068058 |
GO_REF:0000107 MGI:4849589 MGI:86465 |
NCBI chr 1:156,178,754...156,183,118
Ensembl chr 1:156,178,754...156,183,118
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Uqcrq |
ubiquinol-cytochrome c reductase, complex III subunit VII |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:16901643) (MGI:3662936|PMID:16901643) |
RGD |
PMID:16901643 |
MGI:3662936 |
NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
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Grin1 |
glutamate ionotropic receptor NMDA type subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:1928270 (MGI:65431|PMID:8313466) |
RGD |
PMID:8313466 |
MGI:65431 |
NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
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Cdk5r1 |
cyclin-dependent kinase 5 regulatory subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:1330828 (MGI:2149271|PMID:11517264) |
RGD |
PMID:11517264 |
MGI:2149271 |
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
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G |
Cdk5r2 |
cyclin-dependent kinase 5 regulatory subunit 2 |
acts_upstream_of_or_within |
ISO |
MGI:101764 (MGI:2149271|PMID:11517264) |
RGD |
PMID:11517264 |
MGI:2149271 |
NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344
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G |
Ascl1 |
achaete-scute family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857470 (MGI:3621705|PMID:12885554) |
RGD |
PMID:12885554 |
MGI:3621705 |
NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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G |
Cacna1a |
calcium voltage-gated channel subunit alpha1 A |
acts_upstream_of_or_within |
ISO |
MGI:1856210 (MGI:77774|PMID:8719615) |
RGD |
PMID:8719615 |
MGI:77774 |
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
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G |
Kcne1 |
potassium voltage-gated channel subfamily E regulatory subunit 1 |
involved_in |
ISO |
MGI:1857442 (MGI:3625254|PMID:11223304) |
RGD |
PMID:11223304 |
MGI:3625254 |
NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
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Term paths to the root
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