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ONTOLOGY REPORT - ANNOTATIONS


Term:cell migration in hindbrain
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Accession:GO:0021535 term browser browse the term
Definition:The orderly movement of a cell that will reside in the hindbrain.


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cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within ISO UniProtKB:Q02576 (MGI:3723363|PMID:17573818) RGD PMID:17573818 MGI:3723363 NCBI chr 2:204,427,577...204,432,946
Ensembl chr 2:204,427,608...204,432,946
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3512302 (MGI:84546|PMID:8955272)
Ensembl
RGD
PMID:8955272 GO_REF:0000107 MGI:84546 NCBI chr15:88,618,255...88,622,712
Ensembl chr15:88,620,470...88,622,413
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:43,129,413...43,140,442
Ensembl chr 9:43,129,415...43,139,870
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within ISO MGI:3793763|MGI:3793765 (MGI:3793563|PMID:18327254) RGD PMID:18327254 MGI:3793563 NCBI chr13:113,373,569...113,570,774
Ensembl chr13:113,373,578...113,571,648
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:112,677,932...112,789,615
Ensembl chr 3:112,684,152...112,789,289
JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor like GTPase 13B involved_in ISO (MGI:5528615|PMID:23817546) RGD PMID:23817546 MGI:5528615 NCBI chr 7:1,122,567...1,188,209
Ensembl chr 7:1,122,567...1,188,209
JBrowse link
G Flna filamin A IMP RGD PMID:22076441 RGD:11564351 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2156945|MGI:2684610 (MGI:4946895|PMID:21185282)
Ensembl
RGD
PMID:21185282 GO_REF:0000107 MGI:4946895 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1298218 (MGI:2686791|PMID:14715945)
Ensembl
RGD
PMID:14715945 GO_REF:0000107 MGI:2686791 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:96770 (MGI:2686791|PMID:14715945) RGD PMID:14715945 MGI:2686791 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:4418265 (MGI:4849589|PMID:21068058) RGD PMID:21068058 MGI:4849589 NCBI chr14:42,711,169...42,718,707
Ensembl chr14:42,714,315...42,717,010
JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6368077|PMID:2438288)
Ensembl
RGD
PMID:2438288 GO_REF:0000107 MGI:6368077 NCBI chr10:56,205,622...56,211,879
Ensembl chr10:56,205,625...56,211,891
JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4831137 (MGI:4830814|PMID:20153830)
RGD PMID:20153830, PMID:21873635 MGI:4830814, RGD:13792537 NCBI chr 1:214,407,072...214,410,069
Ensembl chr 1:214,408,100...214,408,549
Ensembl chr 1:214,408,100...214,408,549
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:1351063|PMID:10624947) RGD PMID:10624947 MGI:1351063 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3621696|PMID:12123610) RGD PMID:12089526 PMID:12123610 MGI:2181860 MGI:3621696 NCBI chr 4:107,880,611...109,042,724
Ensembl chr 4:107,881,826...108,008,484
JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:58,199,992...58,255,149
Ensembl chr 8:58,202,821...58,253,688
JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:1337096|MGI:1861918 (MGI:1098179|PMID:9338785), (MGI:5545793|PMID:24210661) RGD PMID:9338785 PMID:24210661 MGI:1098179 MGI:5545793 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 acts_upstream_of_or_within ISO MGI:4838182 (MGI:5312167|PMID:22357600) RGD PMID:22357600 MGI:5312167 NCBI chr 7:118,157,093...118,396,733
Ensembl chr 7:118,156,946...118,396,728
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (MGI:5582020|PMID:24466353) RGD PMID:24466353 MGI:5582020 NCBI chr 5:167,330,966...167,664,506
Ensembl chr 5:167,331,035...167,664,505
JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO MGI:108554 (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:104,326,719...104,336,098
Ensembl chr 8:104,326,719...104,335,729
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr10:85,301,797...85,337,971
Ensembl chr10:85,301,875...85,330,397
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    locomotion 1945
      cell motility 1755
        cell migration 1573
          cell migration in hindbrain 21
            deep nuclear neuron cell migration + 0
            hindbrain radial glia guided cell migration + 15
            hindbrain tangential cell migration + 3
            inward migration of deep nuclear neurons 0
            motor neuron precursor migration involved in dorsal motor nucleus of vagus nerve formation 0
            outward migration of deep nuclear neurons 0
            rhombomere cell migration 0
Path 2
Term Annotations click to browse term
  biological_process 19612
    developmental process 6792
      anatomical structure development 6265
        multicellular organism development 5747
          system development 5290
            nervous system development 2718
              central nervous system development 1266
                brain development 972
                  hindbrain development 218
                    cell migration in hindbrain 21
                      deep nuclear neuron cell migration + 0
                      hindbrain radial glia guided cell migration + 15
                      hindbrain tangential cell migration + 3
                      inward migration of deep nuclear neurons 0
                      motor neuron precursor migration involved in dorsal motor nucleus of vagus nerve formation 0
                      outward migration of deep nuclear neurons 0
                      rhombomere cell migration 0
paths to the root