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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of neuron differentiation
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Accession:GO:0045664 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of neuron differentiation.
Synonyms:only_in_taxon: NCBITaxon:33208 ! Metazoa


show annotations for term's descendants           Sort by:
regulation of neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alk ALK receptor tyrosine kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:22,879,653...23,599,636
Ensembl chr 6:22,880,625...23,598,034 		JBrowse link
G Atn1 atrophin 1 IMP RGD PMID:12812981 RGD:1304391 NCBI chr 4:157,554,287...157,568,092
Ensembl chr 4:157,551,276...157,568,132 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:14757642) RGD PMID:14757642 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Barhl2 BarH-like homeobox 2 TAS RGD PMID:9698441 RGD:632026 NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353 		JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:21752992) RGD PMID:21752992 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Bin1 bridging integrator 1 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:10412034)		 Ensembl
Alzheimers_University_of_Toronto
RGD		 PMID:10412034 GO_REF:0000024 GO_REF:0000107 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263 		JBrowse link
G Casz1 castor zinc finger 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400 		JBrowse link
G Ccnd2 cyclin D2 IEP RGD PMID:8028782 RGD:2289187 NCBI chr 4:159,966,883...159,989,261
Ensembl chr 4:159,962,363...159,989,495 		JBrowse link
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO MGI:2653120 (PMID:16648472) RGD PMID:16648472 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3641051 (PMID:17761882), (PMID:18997113) RGD PMID:17761882 PMID:18997113 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 IMP RGD PMID:18218617 RGD:2316246 NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829 		JBrowse link
G Efna3 ephrin A3 IDA RGD PMID:10954848 RGD:634739 NCBI chr 2:174,729,192...174,738,111
Ensembl chr 2:174,729,764...174,738,736 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780|MGI:107754|MGI:1339708|MGI:2150426|MGI:98364 (PMID:15496442), (PMID:22513373) RGD PMID:15496442 PMID:22513373 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fgf20 fibroblast growth factor 20 involved_in ISO (MGI:5424107|PMID:22235191) RGD PMID:22235191 MGI:5424107 NCBI chr16:52,030,549...52,038,201
Ensembl chr16:52,010,194...52,038,204 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:104876 (PMID:10804175) RGD PMID:10804175 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO MGI:104853 (PMID:10804175) RGD PMID:10804175 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_negative_effect ISS
ISO		 GO_REF:0000024
(MGI:4821067|PMID:17681138)		 UniProt
RGD		 PMID:17681138 GO_REF:0000024 MGI:4821067 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Ltk leukocyte receptor tyrosine kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:106,734,675...106,741,552
Ensembl chr 3:106,734,676...106,743,369 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IMP RGD PMID:24388750 RGD:10047173 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (MGI:6390707|PMID:31340148) RGD PMID:31340148 MGI:6390707 NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821 		JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO MGI:2676911|MGI:3619442 (PMID:18842901) RGD PMID:18842901 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Mosmo modulator of smoothened involved_in ISO (MGI:6111022|PMID:29290584) RGD PMID:29290584 MGI:6111022 NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334 		JBrowse link
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:102780|MGI:107754|MGI:109344 (PMID:22513373) RGD PMID:22513373 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Neurog1 neurogenin 1 acts_upstream_of_or_within ISO MGI:102780|MGI:109344|MGI:1339708 (PMID:22513373) RGD PMID:22513373 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Nf1 neurofibromin 1 IMP RGD PMID:18218617 RGD:2316246 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Ngf nerve growth factor acts_upstream_of_or_within ISO (PMID:16516892) RGD PMID:16516892 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
IEA
ISS		 (MGI:3694190|PMID:10892652)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:10892652 GO_REF:0000024 GO_REF:0000107 MGI:3694190 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Nrep neuronal regeneration related protein involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:15485502 GO_REF:0000033, RGD:1540387 NCBI chr18:25,017,069...25,046,593
Ensembl chr18:25,017,083...25,046,591 		JBrowse link
G Numb NUMB, endocytic adaptor protein IMP RGD PMID:8805372 RGD:2302415 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IDA
ISO		 MGI:3521718 (PMID:15548580) RGD PMID:15548580 PMID:11880342 RGD:729590 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in ISO
IEA		 UniProtKB:O60890 (PMID:27160703)
GO_REF:0000107		 RGD
Ensembl		 PMID:27160703 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571 		JBrowse link
G S1pr5 sphingosine-1-phosphate receptor 5 IEP RGD PMID:12617946 RGD:1299278 NCBI chr 8:19,786,676...19,791,862
Ensembl chr 8:19,786,663...19,791,795 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:107754|MGI:109344|MGI:1339708|MGI:2655195|MGI:98364 (PMID:15496442), (PMID:22513373) RGD PMID:15496442 PMID:22513373 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:1888387 (PMID:10842061) RGD PMID:10842061 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 acts_upstream_of_or_within ISO (PMID:15901773) RGD PMID:15901773 NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611 		JBrowse link
G Wdr62 WD repeat domain 62 IMP RGD PMID:24388750 RGD:10047173 NCBI chr 1:85,491,531...85,530,643
Ensembl chr 1:85,491,533...85,530,637 		JBrowse link
G Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma involved_in ISS
ISO		 GO_REF:0000024
(PMID:11824616)		 UniProt
RGD		 PMID:11824616 GO_REF:0000024 NCBI chr12:20,744,500...20,772,828
Ensembl chr12:20,744,535...20,772,827 		JBrowse link
G Zfhx2 zinc finger homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:28,533,155...28,565,667
Ensembl chr15:28,533,156...28,565,128 		JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16251211 GO_REF:0000033, RGD:1625359 NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771 		JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 acts_upstream_of_or_within ISO MGI:3052661|MGI:4841554 (PMID:25654255) RGD PMID:25654255 NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO (PMID:15976303) RGD PMID:15976303 NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149672 (PMID:16038893)		 Ensembl
RGD		 PMID:16038893 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5316576|PMID:21875655)		 UniProt
RGD		 PMID:21875655 GO_REF:0000024 MGI:5316576 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327 		JBrowse link
negative regulation of dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:15522889 RGD:10045566 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3830733 (PMID:19109490) RGD PMID:19109490 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO		 GO_REF:0000107
(MGI:3836885|PMID:19122665)		 Ensembl
RGD		 PMID:19122665 GO_REF:0000107 MGI:3836885 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2679774|PMID:14557550) RGD PMID:14557550 MGI:2679774 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
negative regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in ISO
IEA		 (PMID:26147761)
(MGI:5708430|PMID:26147761)
GO_REF:0000107		 RGD
Ensembl		 PMID:26147761 GO_REF:0000107 MGI:5708430 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IDA PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IDA PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:19555672 RGD:10043320 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
negative regulation of glutamatergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within ISO MGI:2182635 (PMID:16234809) RGD PMID:16234809 NCBI chr 1:244,083,873...244,085,690
Ensembl chr 1:244,083,873...244,085,690 		JBrowse link
negative regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1932522|MGI:3044907 (PMID:16495313)		 Ensembl
RGD		 PMID:16495313 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:17117437) RGD PMID:17117437 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104876|MGI:1341800|MGI:2149672 (PMID:11023859), (PMID:11425898), (PMID:21300049)		 Ensembl
RGD		 PMID:11023859 PMID:11425898 PMID:21300049 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO MGI:104853|MGI:1341800|MGI:2149674 (PMID:11425898), (PMID:21300049) RGD PMID:11425898 PMID:21300049 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585 (PMID:25535395) RGD PMID:25535395 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
negative regulation of inner ear receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in ISO (MGI:3625195|PMID:12208538) RGD PMID:12208538 MGI:3625195 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:3625195|PMID:12208538) RGD PMID:12208538 MGI:3625195 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
negative regulation of neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO MGI:3514266 (PMID:18278038) RGD PMID:18278038 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104518 (PMID:18278038)		 Ensembl
RGD		 PMID:18278038 GO_REF:0000107 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in IDA
ISO		 (PMID:12000752) RGD PMID:12000752 PMID:17936272 RGD:2314144 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:16798874) RGD PMID:16798874 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755 		JBrowse link
G Bex1 brain expressed X-linked 1 acts_upstream_of_or_within IDA PMID:16498402 MGI PMID:16498402 RGD:8554704 NCBI chr  X:99,219,014...99,220,518
Ensembl chr  X:99,219,014...99,220,958 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (PMID:16325379) RGD PMID:16325379 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Calr calreticulin involved_in ISO (PMID:8107809) RGD PMID:8107809 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Casz1 castor zinc finger 1 acts_upstream_of_or_within ISO MGI:3052661|MGI:4841554 (PMID:25654255) RGD PMID:25654255 NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400 		JBrowse link
G Cav1 caveolin 1 IMP RGD PMID:21826216 PMID:23031836 RGD:6784523, RGD:8662269 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (PMID:15737737) RGD PMID:15737737 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4454949|PMID:20471352)		 Ensembl
RGD		 PMID:20471352 GO_REF:0000107 MGI:4454949 NCBI chr 5:83,792,282...83,961,129
Ensembl chr 5:83,792,284...83,960,782 		JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO MGI:88059 (PMID:18278038) RGD PMID:18278038 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887 		JBrowse link
G Cntn4 contactin 4 involved_in ISS
ISO		 PMID:14571131
(PMID:14571131)		 RGD PMID:14571131 PMID:14571131 RGD:8553368 NCBI chr 4:138,624,584...139,622,499
Ensembl chr 4:139,099,152...139,621,090 		JBrowse link
G Ctdsp1 CTD small phosphatase 1 acts_upstream_of_or_within ISO (PMID:17403776) RGD PMID:17403776 NCBI chr 9:75,973,694...75,979,298
Ensembl chr 9:75,973,962...75,979,297 		JBrowse link
G Ddx6 DEAD-box helicase 6 acts_upstream_of_or_within ISO (PMID:25456498) RGD PMID:25456498 NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405 		JBrowse link
G Disp3 dispatched RND transporter family member 3 involved_in ISO (PMID:25281927) RGD PMID:25281927 NCBI chr 5:158,672,015...158,720,806
Ensembl chr 5:158,672,015...158,720,806 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO
IEA		 (MGI:4821185|PMID:20624590)
GO_REF:0000107		 RGD
Ensembl		 PMID:20624590 GO_REF:0000107 MGI:4821185 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1861919 (PMID:20081190)
(MGI:3848562|PMID:19389377)		 UniProt
RGD		 PMID:19389377 PMID:20081190 GO_REF:0000024 MGI:3848562 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dmd dystrophin IMP RGD PMID:21668890 RGD:12902619 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 involved_in ISO UniProtKB:Q01705 (PMID:11564735) RGD PMID:11564735 NCBI chr12:35,849,647...35,880,835
Ensembl chr12:35,849,617...35,880,838 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5494763|PMID:23447528) RGD PMID:23447528 MGI:5494763 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E acts_upstream_of_or_within ISO (PMID:25456498) RGD PMID:25456498 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 acts_upstream_of_or_within ISO MGI:95305 (PMID:25456498) RGD PMID:25456498 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO (PMID:24997765) RGD PMID:24997765 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 IMP RGD PMID:24338128 RGD:11667958 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347476 (PMID:17922007) RGD PMID:17922007 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:1857771|MGI:1932522 (PMID:12151532), (PMID:14704420), (PMID:7605629) RGD PMID:7605629 PMID:12151532 PMID:14704420 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607 		JBrowse link
G Foxo3 forkhead box O3 IMP RGD PMID:23086522 RGD:10402193 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561 		JBrowse link
G Fuom fucose mutarotase acts_upstream_of_or_within ISO MGI:5427618 (PMID:20609214) RGD PMID:20609214 NCBI chr 1:194,888,535...194,893,046
Ensembl chr 1:194,886,709...194,893,046 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within IMP
ISO		 (PMID:15976303) RGD PMID:15976303 PMID:15988002 RGD:2316479 NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:19048639) RGD PMID:19048639 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 acts_upstream_of_or_within ISO MGI:5439169 (PMID:24062445) RGD PMID:24062445 NCBI chr13:46,598,574...46,605,421
Ensembl chr13:46,598,578...46,605,421 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:104876|MGI:2149672|MGI:97363 (PMID:10205173), (PMID:10952889), (PMID:15496443), (PMID:16038893), (PMID:18579678)		 GO_Central
RGD		 PMID:10205173 PMID:10952889 PMID:15496443 PMID:16038893 PMID:18579678 GO_REF:0000033 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:104853|MGI:1859823|MGI:1920441|MGI:2149674|MGI:97363 (PMID:10205173), (PMID:15496443), (PMID:20431123)		 UniProt
RGD		 PMID:10205173 PMID:15496443 PMID:20431123 GO_REF:0000024 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (MGI:4365702|PMID:19631204) RGD PMID:19631204 MGI:4365702 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hmg20a high mobility group 20A acts_upstream_of_or_within ISO MGI:1341190 (PMID:22570500) RGD PMID:22570500 NCBI chr 8:56,819,673...56,895,658
Ensembl chr 8:56,819,659...56,895,656 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104717|MGI:1857530|MGI:96207|MGI:97495 (PMID:18164701)		 Ensembl
RGD		 PMID:18164701 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO MGI:3579084 (PMID:15882580) RGD PMID:15882580 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470 		JBrowse link
G Il1b interleukin 1 beta IDA RGD PMID:22270046 RGD:6482669 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Irx3 iroquois homeobox 3 acts_upstream_of_or_within ISO (PMID:10830170) RGD PMID:10830170 NCBI chr19:15,211,882...15,215,317
Ensembl chr19:15,211,878...15,215,317 		JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:109156 (PMID:14766174)		 Ensembl
RGD		 PMID:14766174 GO_REF:0000107 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Isl2 ISL LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101791|MGI:3046260 (PMID:14766174)		 Ensembl
RGD		 PMID:14766174 GO_REF:0000107 NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790 		JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within
involved_in		 IMP
ISO
IEA		 MGI:2156945 (PMID:15056720)
GO_REF:0000107		 RGD
Ensembl		 PMID:15056720 PMID:18658130 GO_REF:0000107, RGD:2325684 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4420947 (PMID:15064243), (PMID:20081190)		 Ensembl
RGD		 PMID:15064243 PMID:20081190 GO_REF:0000107 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:15148302) RGD PMID:15148302 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253 		JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated acts_upstream_of_or_within ISO (PMID:25456498) RGD PMID:25456498 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852 		JBrowse link
G Mag myelin-associated glycoprotein IDA RGD PMID:19349915 RGD:9685287 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656 		JBrowse link
G Med1 mediator complex subunit 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5297786|PMID:16723356)		 UniProt
RGD		 PMID:16723356 GO_REF:0000024 MGI:5297786 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Meis1 Meis homeobox 1 acts_upstream_of_or_within ISO MGI:96174|MGI:97495 (PMID:18164701) RGD PMID:18164701 NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (PMID:16000382) RGD PMID:16000382 NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689 		JBrowse link
G Nbn nibrin IMP RGD PMID:17442057 RGD:2298997 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nepro nucleolus and neural progenitor protein acts_upstream_of_or_within ISO (PMID:19906856) RGD PMID:19906856 NCBI chr11:55,958,265...55,970,432
Ensembl chr11:55,958,267...55,970,432 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1932100 (PMID:10217145), (PMID:10830170) RGD PMID:10217145 PMID:10830170 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within IMP
ISO		 MGI:104853|MGI:104876|MGI:1932522|MGI:1933835 (PMID:10205173), (PMID:15064243), (PMID:16120638) RGD PMID:10205173 PMID:15064243 PMID:16120638 PMID:19109527 RGD:2325303 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch3 notch receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15064243)		 Ensembl
RGD		 PMID:15064243 GO_REF:0000107 NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2176560 (PMID:12527005), (PMID:14702088), (PMID:16702404), (PMID:17901127) RGD PMID:12527005 PMID:14702088 PMID:16702404 PMID:17901127 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within ISO (PMID:11566099) RGD PMID:11566099 NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95728 (PMID:16950124)		 Ensembl
RGD		 PMID:16950124 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:104717|MGI:96174 (PMID:18164701) RGD PMID:18164701 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:1100882 (PMID:17922007) RGD PMID:17922007 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO (MGI:6271441|PMID:17679093) RGD PMID:17679093 MGI:6271441 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Rap1gap Rap1 GTPase-activating protein IMP RGD PMID:20877310 RGD:9835042 NCBI chr 5:149,873,987...149,939,254
Ensembl chr 5:149,892,019...149,939,253 		JBrowse link
G Rest RE1-silencing transcription factor involved_in IMP
IBA
IEA
ISO
ISS		 GO_REF:0000033
GO_REF:0000107
(MGI:3580760|PMID:15907476), (MGI:5906102|PMID:27819263)
(PMID:18570921), (PMID:21258371)
GO_REF:0000024		 GO_Central
Ensembl
RGD
UniProt		 PMID:15907476 PMID:18570921 PMID:21258371 PMID:27819263 PMID:12657670 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:3580760 MGI:5906102, RGD:1299303 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Rhoa ras homolog family member A IMP RGD PMID:14517206 RGD:1299270 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Rtn4 reticulon 4 IDA RGD PMID:19379790 RGD:2314929 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934268|MGI:3052661 (PMID:15337776), (PMID:16236765) RGD PMID:15337776 PMID:16236765 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shoc2 SHOC2 leucine-rich repeat scaffold protein IMP RGD PMID:21732489 RGD:155804271 NCBI chr 1:252,958,939...253,048,820
Ensembl chr 1:252,959,723...253,047,337 		JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:5582170|PMID:17576749) RGD PMID:17576749 MGI:5582170 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Slc6a4 solute carrier family 6 member 4 IMP RGD PMID:18573488 RGD:4889489 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16631155) RGD PMID:16631155 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Spag9 sperm associated antigen 9 IMP RGD PMID:19959466 RGD:30296662 NCBI chr10:78,943,439...79,077,797
Ensembl chr10:78,943,479...79,077,797 		JBrowse link
G Tlx3 T-cell leukemia, homeobox 3 acts_upstream_of_or_within ISO MGI:104867 (PMID:16234809) RGD PMID:16234809 NCBI chr10:17,789,706...17,792,207
Ensembl chr10:17,790,053...17,792,207 		JBrowse link
G Tp73 tumor protein p73 IMP RGD PMID:17353261 RGD:2291838 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128 		JBrowse link
G Ttc3 tetratricopeptide repeat domain 3 involved_in ISO (PMID:17488780) RGD PMID:17488780 NCBI chr11:33,689,119...33,788,976
Ensembl chr11:33,688,952...33,788,975 		JBrowse link
G Tunar TCL1 upstream neural differentiation-associated RNA involved_in ISO (MGI:6857012|PMID:35036403) RGD PMID:35036403 MGI:6857012 NCBI chr 6:124,245,949...124,293,440 JBrowse link
G Zfp536 zinc finger protein 536 acts_upstream_of_or_within ISO (PMID:19398580) RGD PMID:19398580 NCBI chr 1:90,000,359...90,463,423
Ensembl chr 1:90,002,858...90,462,990 		JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within ISO (PMID:19515908) RGD PMID:19515908 NCBI chr 7:89,226,358...89,374,266
Ensembl chr 7:89,226,463...89,374,378 		JBrowse link
negative regulation of neuron maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B involved_in ISO (MGI:1330409|PMID:10021336) RGD PMID:10021336 MGI:1330409 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO MGI:102539|MGI:1934030|MGI:97321 (PMID:23015435) RGD PMID:23015435 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Mir133b microRNA 133b acts_upstream_of_or_within ISO (PMID:17656374) RGD PMID:17656374 NCBI chr 9:23,098,134...23,098,217
Ensembl chr 9:23,098,134...23,098,217 		JBrowse link
G Nox1 NADPH oxidase 1 IMP RGD PMID:25617620 RGD:329955357 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236 		JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO MGI:1934030|MGI:2152453|MGI:97321 (PMID:23015435) RGD PMID:23015435 NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593 		JBrowse link
negative regulation of neuron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BCL11 transcription factor A IMP RGD PMID:19616629 RGD:11100018 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
negative regulation of photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntf ciliary neurotrophic factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15207851)		 Ensembl
RGD		 PMID:15207851 GO_REF:0000107 NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877 		JBrowse link
G Dlx1 distal-less homeobox 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5316576|PMID:21875655)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21875655 GO_REF:0000024 GO_REF:0000107 MGI:5316576 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5316576|PMID:21875655)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21875655 GO_REF:0000024 GO_REF:0000107 MGI:5316576 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1933835|MGI:3052237 (PMID:16452096) RGD PMID:16452096 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO MGI:98371 (PMID:19490914) RGD PMID:19490914 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:98370 (PMID:19490914)		 UniProt
RGD		 PMID:19490914 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 acts_upstream_of_or_within ISO MGI:3052661|MGI:4841554 (PMID:25654255) RGD PMID:25654255 NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400 		JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149672 (PMID:18173746)		 Ensembl
RGD		 PMID:18173746 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5316576|PMID:21875655)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21875655 GO_REF:0000024 GO_REF:0000107 MGI:5316576 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5316576|PMID:21875655)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21875655 GO_REF:0000024 GO_REF:0000107 MGI:5316576 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:18973577) RGD PMID:18973577 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802 		JBrowse link
G Tgif2 TGFB-induced factor homeobox 2 acts_upstream_of_or_within ISO (PMID:18926818) RGD PMID:18926818 NCBI chr 3:145,333,152...145,348,599
Ensembl chr 3:145,333,418...145,348,596 		JBrowse link
positive regulation of dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1347476|MGI:2653543 (PMID:17596284)		 Ensembl
RGD		 PMID:17596284 GO_REF:0000107 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347472|MGI:2177337 (PMID:17596284) RGD PMID:17596284 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
positive regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
positive regulation of glutamatergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 IMP RGD PMID:24030726 RGD:12790968 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
positive regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:11023859), (PMID:19154718) RGD PMID:11023859 PMID:19154718 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:12417662) RGD PMID:12417662 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
positive regulation of inner ear receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3625195|PMID:12208538)
MGI:3767172 (PMID:21146598)		 RGD PMID:12208538 PMID:21146598 MGI:3625195 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
positive regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:4948425|PMID:21347250) RGD PMID:21347250 MGI:4948425 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
positive regulation of neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:18256280 RGD:2306202 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124 		JBrowse link
G Adra2b adrenoceptor alpha 2B involved_in ISO (PMID:17215105) RGD PMID:17215105 NCBI chr 3:114,585,174...114,589,220
Ensembl chr 3:114,585,169...114,589,355 		JBrowse link
G Adra2c adrenoceptor alpha 2C involved_in ISO (PMID:17215105) RGD PMID:17215105 NCBI chr14:75,470,884...75,472,846
Ensembl chr14:75,471,143...75,472,846 		JBrowse link
G App amyloid beta precursor protein involved_in ISO ComplexPortal:CPX-1134 (PMID:15190117) RGD PMID:15190117 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO
IBA
IEA
ISS		 (PMID:28453519)
GO_REF:0000033
GO_REF:0000107
(MGI:5907381|PMID:28453519)
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:28453519 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5907381 NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in IDA PMID:10648228 RGD
UniProt		 PMID:17936272 PMID:10648228 RGD:2314144, RGD:13673741 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 involved_in ISO (MGI:5009203|PMID:10648228) RGD PMID:10648228 MGI:5009203 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO (PMID:23160044) RGD PMID:23160044 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:12798291) RGD PMID:12798291 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Bend6 BEN domain containing 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23571214)		 GO_Central
RGD		 PMID:23571214 GO_REF:0000033 NCBI chr 9:36,081,033...36,135,309
Ensembl chr 9:36,081,484...36,135,228 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:9786991)		 Ensembl
RGD		 PMID:9786991 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 IMP
ISO
IEA		 (PMID:9786991)
GO_REF:0000107		 RGD
Ensembl		 PMID:9786991 PMID:19287192 GO_REF:0000107, RGD:9068400 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp6 bone morphogenetic protein 6 acts_upstream_of_or_within ISO (PMID:9786991) RGD PMID:9786991 NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (PMID:9786991) RGD PMID:9786991 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Bnip2 BCL2 interacting protein 2 acts_upstream_of_or_within ISO (PMID:19244314) RGD PMID:19244314 NCBI chr 8:70,640,436...70,661,782
Ensembl chr 8:70,640,445...70,675,590 		JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:82,348,501...82,550,506
Ensembl chr 5:82,348,930...82,493,150 		JBrowse link
G Brinp2 BMP/retinoic acid inducible neural specific 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:70,431,006...70,532,766
Ensembl chr13:70,431,010...70,531,810 		JBrowse link
G Brinp3 BMP/retinoic acid inducible neural specific 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:58,413,883...58,846,828
Ensembl chr13:58,413,883...58,846,770 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IMP RGD PMID:19559698 RGD:4889986 NCBI chr10:68,322,826...68,327,380
Ensembl chr10:68,322,829...68,327,377 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IMP RGD PMID:19559698 RGD:4889986 NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260 		JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653120 (PMID:16648472), (PMID:19244314)		 Ensembl
RGD		 PMID:16648472 PMID:19244314 GO_REF:0000107 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Cpne1 copine 1 involved_in ISO
IEA		 (PMID:23263657), (PMID:25450385)
GO_REF:0000107		 RGD
Ensembl		 PMID:23263657 PMID:25450385 GO_REF:0000107 NCBI chr 3:144,587,531...144,629,911
Ensembl chr 3:144,588,995...144,598,636 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:17425785 RGD:2306580 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168 		JBrowse link
G Cyb5d2 cytochrome b5 domain containing 2 acts_upstream_of_or_within ISO (PMID:19968755) RGD PMID:19968755 NCBI chr10:57,394,268...57,413,336
Ensembl chr10:57,396,765...57,413,715 		JBrowse link
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857750 (PMID:18848628)		 Ensembl
RGD		 PMID:18848628 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
G Dmd dystrophin involved_in ISO
IMP		 (PMID:15149856) RGD PMID:15149856 PMID:15149856 RGD:8554509 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IMP RGD PMID:15632075 RGD:1601090 NCBI chr 3:142,130,588...142,169,128
Ensembl chr 3:142,130,592...142,169,124 		JBrowse link
G Duoxa1 dual oxidase maturation factor 1 acts_upstream_of_or_within ISO (PMID:20233719) RGD PMID:20233719 NCBI chr 3:109,249,815...109,260,511
Ensembl chr 3:109,249,923...109,260,499 		JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (MGI:5294522|PMID:21350944) RGD PMID:21350944 MGI:5294522 NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911 		JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 acts_upstream_of_or_within ISO (PMID:25456498) RGD PMID:25456498 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941 		JBrowse link
G Epo erythropoietin IDA RGD PMID:12876482 RGD:2313656 NCBI chr12:19,204,258...19,207,948
Ensembl chr12:19,204,508...19,207,946 		JBrowse link
G Etv5 ETS variant transcription factor 5 IMP RGD PMID:12297104 RGD:2316288 NCBI chr11:78,608,618...78,666,221
Ensembl chr11:78,608,710...78,666,215 		JBrowse link
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO MGI:1859823 (PMID:20431123) RGD PMID:20431123 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:104876|MGI:1920441 (PMID:20431123) RGD PMID:20431123 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO
ISS		 (PMID:8622701)
GO_REF:0000024		 RGD
UniProt		 PMID:8622701 GO_REF:0000024 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347476 (PMID:17922007) RGD PMID:17922007 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:2149593 (PMID:16314515) RGD PMID:16314515 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607 		JBrowse link
G Gata2 GATA binding protein 2 IMP RGD PMID:21430145 RGD:9587810 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Gdf5 growth differentiation factor 5 IDA RGD PMID:15906156 RGD:1598708 NCBI chr 3:144,454,316...144,458,508
Ensembl chr 3:144,454,338...144,458,612 		JBrowse link
G Gdf6 growth differentiation factor 6 acts_upstream_of_or_within ISO (PMID:9786991) RGD PMID:9786991 NCBI chr 5:22,996,246...23,012,567
Ensembl chr 5:22,996,246...23,012,567 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO (PMID:9786991) RGD PMID:9786991 NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447 		JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (MGI:5299268|PMID:21943603)
MGI:5302017 (PMID:23329048)
GO_REF:0000033		 RGD
GO_Central		 PMID:21943603 PMID:23329048 GO_REF:0000033 MGI:5299268 NCBI chr 1:153,679,718...153,761,452
Ensembl chr 1:153,679,718...153,761,446 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:97490 (PMID:16950124) RGD PMID:16950124 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gprc5b G protein-coupled receptor, class C, group 5, member B involved_in ISO (MGI:5543849|PMID:24089469) RGD PMID:24089469 MGI:5543849 NCBI chr 1:173,316,904...173,340,933
Ensembl chr 1:173,316,907...173,340,932 		JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like involved_in ISO (MGI:4365702|PMID:19631204), (MGI:5285519|PMID:21259317) RGD PMID:19631204 PMID:21259317 MGI:4365702 MGI:5285519 NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152 		JBrowse link
G Hmg20b high mobility group 20 B acts_upstream_of_or_within ISO MGI:1914117 (PMID:22570500) RGD PMID:22570500 NCBI chr 7:8,368,934...8,373,650
Ensembl chr 7:8,368,990...8,373,640 		JBrowse link
G Hoxd3 homeo box D3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:96174 (PMID:18164701)		 Ensembl
RGD		 PMID:18164701 GO_REF:0000107 NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A IMP RGD PMID:23000394 RGD:7257594 NCBI chr20:3,870,765...3,873,221
Ensembl chr20:3,856,006...3,873,227 		JBrowse link
G Ifng interferon gamma IDA RGD PMID:19355840 RGD:2311496 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Il6 interleukin 6 IMP RGD PMID:7538937 RGD:2306944 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Impact impact RWD domain protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:5494763|PMID:23447528)		 UniProt
RGD		 PMID:23447528 GO_REF:0000024 MGI:5494763 NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569 		JBrowse link
G Irx3 iroquois homeobox 3 acts_upstream_of_or_within ISO (PMID:10830170) RGD PMID:10830170 NCBI chr19:15,211,882...15,215,317
Ensembl chr19:15,211,878...15,215,317 		JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18658130 RGD:2325684 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Kctd11 potassium channel tetramerization domain containing 11 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:16148242)		 GO_Central
RGD		 PMID:16148242 GO_REF:0000033 NCBI chr10:54,602,575...54,604,738
Ensembl chr10:54,599,754...54,604,760 		JBrowse link
G Kdm4a lysine demethylase 4A IMP RGD PMID:24747049 RGD:9587433 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501 		JBrowse link
G Kdm4c lysine demethylase 4C IMP RGD PMID:24747049 RGD:9587433 NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818 		JBrowse link
G Lin28a lin-28 homolog A acts_upstream_of_or_within ISO (PMID:20179095) RGD PMID:20179095 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122 		JBrowse link
G Map1b microtubule-associated protein 1B IMP RGD PMID:8450955 RGD:2304228 NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 IMP RGD PMID:17188238 RGD:2302281 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(MGI:5284763|PMID:18579729)		 UniProt
RGD		 PMID:18579729 GO_REF:0000024 MGI:5284763 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mir137 microRNA 137 involved_in ISO (PMID:23400681) RGD PMID:23400681 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985 		JBrowse link
G Mmd monocyte to macrophage differentiation-associated involved_in ISO
IEA		 (PMID:21968647)
GO_REF:0000107		 RGD
Ensembl		 PMID:21968647 GO_REF:0000107 NCBI chr10:75,073,278...75,101,528
Ensembl chr10:75,073,365...75,101,528 		JBrowse link
G Mmd2 monocyte to macrophage differentiation-associated 2 involved_in ISO (PMID:21968647) RGD PMID:21968647 NCBI chr12:11,962,733...12,009,776
Ensembl chr12:11,962,757...12,009,773 		JBrowse link
G Nap1l2 nucleosome assembly protein 1-like 2 acts_upstream_of_or_within ISO (PMID:17591696) RGD PMID:17591696 NCBI chr  X:68,174,051...68,176,449
Ensembl chr  X:68,173,987...68,176,666 		JBrowse link
G Nbl1 NBL1, DAN family BMP antagonist acts_upstream_of_or_within ISO (PMID:16325379) RGD PMID:16325379 NCBI chr 5:151,318,752...151,329,948
Ensembl chr 5:151,318,754...151,338,719 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 involved_in ISO (MGI:5297786|PMID:16723356) RGD PMID:16723356 MGI:5297786 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IDA
ISO		 (MGI:5009389|PMID:18007592) RGD PMID:18007592 PMID:10101232 MGI:5009389, RGD:727267 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3789797|PMID:18214987), (MGI:4830798|PMID:20346398), (MGI:5009203|PMID:10648228), (MGI:5009405|PMID:16730830)		 UniProt
Ensembl
RGD		 PMID:10648228 PMID:16730830 PMID:18214987 PMID:20346398 GO_REF:0000024 GO_REF:0000107 MGI:3789797 MGI:4830798 MGI:5009203 MGI:5009405 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986 		JBrowse link
G Neurog1 neurogenin 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5009203|PMID:10648228), (MGI:5009389|PMID:18007592)		 UniProt
RGD		 PMID:10648228 PMID:18007592 GO_REF:0000024 MGI:5009203 MGI:5009389 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:18579678) RGD PMID:18579678 NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154 		JBrowse link
G Neurog3 neurogenin 3 IMP RGD PMID:9238023 RGD:1642078 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262 		JBrowse link
G Ngf nerve growth factor IDA RGD PMID:18846328 RGD:2303808 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452 		JBrowse link
G Ngfr nerve growth factor receptor IDA RGD PMID:23940017 RGD:10414074 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1932100 (PMID:10217145), (PMID:10830170) RGD PMID:10217145 PMID:10830170 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO
IEA		 (PMID:15653675)
GO_REF:0000107		 RGD
Ensembl		 PMID:15653675 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:10830170) RGD PMID:10830170 NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681 		JBrowse link
G Pcp4 Purkinje cell protein 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21491429)		 UniProt
RGD		 PMID:21491429 GO_REF:0000024 NCBI chr11:35,759,711...35,861,725
Ensembl chr11:35,800,713...35,861,725 		JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:1100882 (PMID:17922007) RGD PMID:17922007 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 acts_upstream_of_or_within IDA PMID:16352598 MGI PMID:16352598 RGD:10047232 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Pten phosphatase and tensin homolog IMP RGD PMID:10662831 RGD:12801496 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Rara retinoic acid receptor, alpha IDA RGD PMID:19100254 RGD:2314252 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rbm12 RNA binding motif protein 12 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:144,609,661...144,629,911
Ensembl chr 3:144,611,623...144,629,915
Ensembl chr 3:144,611,623...144,629,915 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:6201823|PMID:21884984)		 UniProt
RGD		 PMID:21884984 GO_REF:0000024 MGI:6201823 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Rgs6 regulator of G-protein signaling 6 IDA RGD PMID:12140291 RGD:737642 NCBI chr 6:102,264,451...102,796,311
Ensembl chr 6:102,264,447...102,824,753 		JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17488780)
GO_REF:0000107		 RGD
Ensembl		 PMID:17488780 GO_REF:0000107 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Rnf112 ring finger protein 112 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21566658)		 Ensembl
RGD		 PMID:21566658 GO_REF:0000107 NCBI chr10:46,121,146...46,126,691
Ensembl chr10:46,121,148...46,126,699 		JBrowse link
G S100b S100 calcium binding protein B involved_in ISO (MGI:66943|PMID:8202493), (MGI:7434528|PMID:2592414) RGD PMID:2592414 PMID:8202493 MGI:66943 MGI:7434528 NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:2388379 (PMID:18024993) RGD PMID:18024993 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 IMP RGD PMID:15066995 RGD:13504745 NCBI chr 1:136,124,500...136,255,669
Ensembl chr 1:136,124,499...136,255,584 		JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:8124714 RGD:69996 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shoc2 SHOC2 leucine-rich repeat scaffold protein IMP RGD PMID:25514808 RGD:155804270 NCBI chr 1:252,958,939...253,048,820
Ensembl chr 1:252,959,723...253,047,337 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (MGI:6152283|PMID:27399968) RGD PMID:27399968 MGI:6152283 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192 		JBrowse link
G Socs2 suppressor of cytokine signaling 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12368809)		 Ensembl
RGD		 PMID:12368809 GO_REF:0000107 NCBI chr 7:30,006,360...30,045,161
Ensembl chr 7:30,008,578...30,043,548 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO
ISS		 (PMID:19808959)
(MGI:5285167|PMID:19808959), (MGI:5285172|PMID:19490090)
GO_REF:0000024		 RGD
UniProt		 PMID:19490090 PMID:19808959 GO_REF:0000024 MGI:5285167 MGI:5285172 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:3625176 (PMID:16651659) RGD PMID:16651659 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Spag9 sperm associated antigen 9 acts_upstream_of_or_within ISO (PMID:19244314) RGD PMID:19244314 NCBI chr10:78,943,439...79,077,797
Ensembl chr10:78,943,479...79,077,797 		JBrowse link
G Tcf12 transcription factor 12 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3789797|PMID:18214987)		 UniProt
RGD		 PMID:18214987 GO_REF:0000024 MGI:3789797 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201 		JBrowse link
G Tcf3 transcription factor 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3789797|PMID:18214987)		 UniProt
RGD		 PMID:18214987 GO_REF:0000024 MGI:3789797 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tcf4 transcription factor 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3789797|PMID:18214987)		 UniProt
RGD		 PMID:18214987 GO_REF:0000024 MGI:3789797 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 IDA RGD PMID:15901773 RGD:1598578 NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611 		JBrowse link
G Tle6 TLE family member 6, subcortical maternal complex member acts_upstream_of_or_within ISO MGI:1347464 (PMID:16314515) RGD PMID:16314515 NCBI chr 7:8,107,050...8,118,639
Ensembl chr 7:8,107,207...8,118,639 		JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (MGI:3836317|PMID:19269368) RGD PMID:19269368 MGI:3836317 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018 		JBrowse link
G Trpc5 transient receptor potential cation channel, subfamily C, member 5 IMP RGD PMID:20479868 RGD:10044014 NCBI chr  X:107,946,163...108,230,991
Ensembl chr  X:107,939,131...108,230,991 		JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 IMP RGD PMID:20479868 RGD:10044014 NCBI chr 8:5,759,387...5,864,000
Ensembl chr 8:5,758,935...5,828,092 		JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) RGD PMID:23821644 NCBI chr  X:116,335,308...116,353,332
Ensembl chr  X:116,335,308...116,353,236 		JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 involved_in ISO (MGI:3715084|PMID:17400546) RGD PMID:17400546 MGI:3715084 NCBI chr14:85,683,670...85,825,068
Ensembl chr14:85,684,414...85,818,524 		JBrowse link
G Vwc2l von Willebrand factor C domain containing 2 like acts_upstream_of_or_within ISO (PMID:19852960) RGD PMID:19852960 NCBI chr 9:72,252,793...72,448,543
Ensembl chr 9:72,253,387...72,444,839 		JBrowse link
G Zc4h2 zinc finger C4H2-type containing involved_in ISO
IBA		 (PMID:26056227)
GO_REF:0000033		 RGD
GO_Central		 PMID:26056227 GO_REF:0000033 NCBI chr  X:60,525,706...60,546,519
Ensembl chr  X:60,525,712...60,546,488 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4830798|PMID:20346398)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20346398 GO_REF:0000024 GO_REF:0000107 MGI:4830798 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
positive regulation of neuron maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 IEP RGD PMID:9920788 RGD:632499 NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2156165 (PMID:9547242)		 Ensembl
RGD		 PMID:9547242 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in IMP PMID:20083202 UniProt PMID:20083202 RGD:4107359 NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268 		JBrowse link
G Map3k13 mitogen-activated protein kinase kinase kinase 13 involved_in ISO (MGI:5810221|PMID:27511108) RGD PMID:27511108 MGI:5810221 NCBI chr11:79,094,087...79,235,181
Ensembl chr11:79,097,247...79,235,181 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:24118019 RGD:10041036 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Ngf nerve growth factor acts_upstream_of_or_within ISO MGI:102539|MGI:1861437|MGI:1934030 (PMID:23015435) RGD PMID:23015435 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452 		JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IMP RGD PMID:23543485 RGD:7800725 NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109 		JBrowse link
G Ret ret proto-oncogene IMP RGD PMID:18501516 RGD:2324932 NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176 		JBrowse link
positive regulation of photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crx cone-rod homeobox IEP RGD PMID:16799048 RGD:1600973 NCBI chr 1:76,539,812...76,553,694
Ensembl chr 1:76,540,141...76,545,818 		JBrowse link
G Shh sonic hedgehog signaling molecule IDA RGD PMID:9236238 RGD:2306313 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
regulation of dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ferd3l Fer3-like bHLH transcription factor acts_upstream_of_or_within ISO MGI:4460989 (PMID:20460368) RGD PMID:20460368 NCBI chr 6:50,645,379...50,646,268
Ensembl chr 6:50,645,379...50,646,268 		JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 involved_in ISO (MGI:5466648|PMID:23109420) RGD PMID:23109420 MGI:5466648 NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901 		JBrowse link
regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:4818492 (PMID:22991444) RGD PMID:22991444 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:104853|MGI:104876 (PMID:21300049) RGD PMID:21300049 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:104654 (PMID:19154718) RGD PMID:19154718 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Mycl MYCL proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:97357 (PMID:23022312) RGD PMID:23022312 NCBI chr 5:135,274,713...135,281,584
Ensembl chr 5:135,274,748...135,281,582 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:96799 (PMID:23022312)		 Ensembl
RGD		 PMID:23022312 GO_REF:0000107 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585 (PMID:25535395) RGD PMID:25535395 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrp1 epithelial splicing regulatory protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5915403|PMID:29107558)		 UniProt
RGD		 PMID:29107558 GO_REF:0000024 MGI:5915403 NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062 		JBrowse link
regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P97299 (MGI:5448935|PMID:22290867)		 Ensembl
RGD		 PMID:22290867 GO_REF:0000107 MGI:5448935 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO UniProtKB:Q8C4U3 (MGI:5448935|PMID:22290867) RGD PMID:22290867 MGI:5448935 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
regulation of neuron maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:21168496) RGD PMID:21168496 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Mir132 microRNA 132 acts_upstream_of_or_within ISO MGI:2676888 (PMID:21059906) RGD PMID:21059906 NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796 		JBrowse link
G Mir212 microRNA 212 acts_upstream_of_or_within ISO MGI:2676817 (PMID:21059906) RGD PMID:21059906 NCBI chr10:60,023,403...60,023,513
Ensembl chr10:60,023,403...60,023,513 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2180784 (PMID:23258346) RGD PMID:23258346 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within ISO MGI:97845 (PMID:23258346) RGD PMID:23258346 NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260 		JBrowse link
regulation of timing of neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104877|MGI:2149672 (PMID:11500373), (PMID:8543157)		 Ensembl
RGD		 PMID:8543157 PMID:11500373 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (PMID:11500373) RGD PMID:11500373 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (PMID:15385616) RGD PMID:15385616 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) RGD PMID:18215621 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852 		JBrowse link
regulation of timing of subpallium neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:9876181) RGD PMID:9876181 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19694
    developmental process 6963
      regulation of developmental process 2755
        regulation of cell differentiation 1775
          regulation of neuron differentiation 244
            negative regulation of neuron differentiation + 90
            positive regulation of neuron differentiation + 119
            regulation of amacrine cell differentiation + 8
            regulation of cerebellar neuron development + 0
            regulation of dopaminergic neuron differentiation + 11
            regulation of forebrain neuron differentiation + 6
            regulation of glutamatergic neuron differentiation + 2
            regulation of mechanoreceptor differentiation + 12
            regulation of neuron maturation + 19
            regulation of photoreceptor cell differentiation + 9
            regulation of spinal cord association neuron differentiation + 0
            regulation of stomach neuroendocrine cell differentiation + 1
            regulation of timing of neuron differentiation + 5
Path 2
Term Annotations click to browse term
  biological_process 19694
    developmental process 6963
      anatomical structure development 6486
        multicellular organism development 5239
          system development 4526
            nervous system development 2801
              neurogenesis 2065
                generation of neurons 1780
                  neuron differentiation 1698
                    regulation of neuron differentiation 244
                      negative regulation of neuron differentiation + 90
                      positive regulation of neuron differentiation + 119
                      regulation of amacrine cell differentiation + 8
                      regulation of cerebellar neuron development + 0
                      regulation of dopaminergic neuron differentiation + 11
                      regulation of forebrain neuron differentiation + 6
                      regulation of glutamatergic neuron differentiation + 2
                      regulation of mechanoreceptor differentiation + 12
                      regulation of neuron maturation + 19
                      regulation of photoreceptor cell differentiation + 9
                      regulation of spinal cord association neuron differentiation + 0
                      regulation of stomach neuroendocrine cell differentiation + 1
                      regulation of timing of neuron differentiation + 5
paths to the root