Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Hmg20b (high mobility group 20 B) Rattus norvegicus
Analyze
Symbol: Hmg20b
Name: high mobility group 20 B
Description: Predicted to have protein heterodimerization activity. Predicted to be involved in negative regulation of protein sumoylation; positive regulation of neuron differentiation; and skeletal muscle cell differentiation. Predicted to localize to the nuclear body. Orthologous to human HMG20B (high mobility group 20B); INTERACTS WITH bisphenol A; cadmium dichloride; pregnenolone 16alpha-carbonitrile.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362825; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Orthologs:
Homo sapiens (human) : HMG20B (high mobility group 20B)  HGNC  Alliance
Mus musculus (house mouse) : Hmg20b (high mobility group 20B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hmg20b (high mobility group 20B)
Pan paniscus (bonobo/pygmy chimpanzee) : HMG20B (high mobility group 20B)
Canis lupus familiaris (dog) : HMG20B (high mobility group 20B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hmg20b (high mobility group 20B)
Sus scrofa (pig) : HMG20B (high mobility group 20B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0711,238,594 - 11,243,312 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl711,238,630 - 11,243,310 (+)Ensembl
Rnor_5.0711,405,476 - 11,410,192 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.479,853,290 - 9,857,970 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.179,837,939 - 9,857,556 (+)NCBI
Celera76,558,025 - 6,562,701 (+)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hmg20b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309235
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.