Symbol:
HMG20B
Name:
high mobility group 20B
RGD ID:
13959429
Description:
ENCODES a protein that exhibits DNA binding (inferred); INVOLVED IN negative regulation of protein sumoylation (inferred); positive regulation of neuron differentiation (inferred); protein sumoylation (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); RASopathy (ortholog); FOUND IN nuclear body (inferred); nucleoplasm (inferred); nucleus (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
HMG20B (Sus scrofa - pig)
HMG20B (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 19 3,572,944 - 3,579,083 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 19 3,572,777 - 3,579,088 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 19 3,572,942 - 3,579,081 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 19 3,523,943 - 3,530,081 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 19 3,525,521 - 3,530,079 NCBI Celera 19 3,509,760 - 3,515,897 (+) NCBI Celera Cytogenetic Map 19 p13.3 NCBI HuRef 19 3,338,210 - 3,344,475 (+) NCBI HuRef CHM1_1 19 3,572,606 - 3,578,717 (+) NCBI CHM1_1 T2T-CHM13v2.0 19 3,551,100 - 3,557,239 (+) NCBI T2T-CHM13v2.0
Hmg20b (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 10 81,181,880 - 81,186,777 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 10 81,181,882 - 81,186,314 (-) Ensembl GRCm39 Ensembl GRCm38 10 81,346,046 - 81,350,943 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 10 81,346,048 - 81,350,480 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 10 80,808,791 - 80,813,202 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 10 80,749,181 - 80,753,539 (-) NCBI MGSCv36 mm8 Celera 10 82,366,836 - 82,371,247 (-) NCBI Celera Cytogenetic Map 10 C1 NCBI cM Map 10 39.72 NCBI
Hmg20b (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 9,019,670 - 9,024,382 (+) NCBI GRCr8 mRatBN7.2 7 8,368,934 - 8,373,650 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 8,368,990 - 8,373,640 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 7 11,254,569 - 11,259,228 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 7 13,130,054 - 13,134,714 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 7 10,997,679 - 11,002,358 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 7 11,238,594 - 11,243,312 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 11,238,630 - 11,243,310 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 11,405,476 - 11,410,192 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 9,853,290 - 9,857,970 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 7 9,837,939 - 9,857,556 (+) NCBI Celera 7 6,558,025 - 6,562,701 (+) NCBI Celera Cytogenetic Map 7 q11 NCBI
Hmg20b (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955495 5,524,874 - 5,529,926 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955495 5,515,996 - 5,530,424 (+) NCBI ChiLan1.0 ChiLan1.0
HMG20B (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 20 7,970,098 - 7,976,304 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 19 7,202,040 - 7,208,250 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 19 2,598,588 - 2,604,799 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 19 3,548,451 - 3,554,725 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 19 3,548,451 - 3,554,725 (+) Ensembl panpan1.1 panPan2
HMG20B (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 20 55,840,192 - 55,844,949 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 20 55,841,959 - 55,844,862 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 20 55,565,327 - 55,570,345 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 20 56,500,142 - 56,505,157 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 20 56,500,137 - 56,505,529 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 20 55,555,796 - 55,560,811 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 20 56,039,212 - 56,044,218 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 20 56,237,958 - 56,242,974 (-) NCBI UU_Cfam_GSD_1.0
Hmg20b (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405118 215,802,182 - 215,807,432 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936588 2,027,317 - 2,032,834 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936588 2,027,360 - 2,032,601 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
HMG20B (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 6 3,333,731 - 3,340,033 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 6 3,333,885 - 3,340,138 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666081 5,148,505 - 5,155,151 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Hmg20b (Heterocephalus glaber - naked mole-rat)
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
10
4
23
3
2
5
14
12
23
3
6
3
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSSSCT00000045156 ⟹ ENSSSCP00000045693
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 2 75,093,075 - 75,098,536 (-) Ensembl
Ensembl Acc Id:
ENSSSCT00000057853 ⟹ ENSSSCP00000031815
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 2 75,093,075 - 75,098,525 (-) Ensembl
RefSeq Acc Id:
XM_021084116 ⟹ XP_020939775
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 75,093,071 - 75,098,566 (-) NCBI
Sequence:
TTTATTAGCATGCCGGGGGCGGGGTGGGGCGGAGCAGGCGGCAGGGGCGGGCTTGGAGCGGTTGGTTGGAGCGTCGCAGCAGCCGAGAGGTCCGGGAAAGTTTCTTTCGAGGTGAAAACAGCCGCAGA AGTCGGGGCCCTGCGAGAGAGCGGGGGGCGTGGGGGTCCCAGGATCAGGGCGGGGCCCCTCCCGAGCCGGGGGTTGCGGACCTGGGTCTCCTGGGGGGCGATCGTCCAACAAAGGATCCCTGGGGCGC CCGCCCTCGAGGGCCTCCCTGTCCCCGGATCCTGCCCCCCCCGGCATTCCGGGGCTCCACAGCCAGACCCCGCCGTCAGCTGCTCGAGAGACCCTCACTCGGCCACGATTGTGCTTTCCAGGTCGGCG AGCGGTAAGACTCCAGGACAGCACGGGGGATTCGTGGTTGCTGTCAAGCAAGAGCGCATCGAGGGCCCGCGGGCAGGAGAGAAGGGGTCCCACGAGGAGGAGCCGGTGAAGAAGCGCGGCTGGCCCAA GGGCAAGAAGCGGAAGAAGATCCTACCCAATGGGCCTAAGGCACCGGTCACCGGCTACGTGCGCTTCCTGAACGAGCGGCGTGAGCAGATTCGTACTCGCCACCCAGACCTGCCTTTTCCCGAGATTA CCAAGATGCTGGGCGCGGAGTGGAGCAAGCTGCAGCCAGCGGAGAAGCAGCGGTACCTGGATGAGGCCGAACGGGAGAAGCAGCAGTACATGAAGGAGCTGAGAGCGTACCAGCAGTCCGAAGCCTAC AAGATGTGCACGGAGAAGATACAGGAAAAGAAGATCAAGAAAGAAGACTCCGGCTCCGGGCTCATGAATACCCTTTTGAATGGACACAAGGGTGGGGACTGTGACGGCTTTTCCACCTTCGACGTCCC CATCTTCACTGAAGAATTCTTGGACCAAAACAAAGCTCGGGAGGCGGAGCTGCGGCGCCTGCGGAAGATGAACGTGGCCTTCGAGGAGCAGAATGCGGTGCTACAGAGGCACACACAGAGCATGAGCA GCGCGCGCGAGCGCCTGGAGCAGGAGCTGGCCTTGGAGGAGCGGCGGACGCTGGCACTACAGCAGCAGCTCCAGGCGGTGCGCCAGGCGCTCACCGCCAGCTTCGCGTCGTTGCCGGTGCCCGGCACA GGCGAGACGCCCACGCTCAGCACCCTGGACTTCTACATGGCCCGGCTGCACGGCGCCATCGAGCGCGACCCCGCCCAGCACGAGAAGCTTATCGTCCGCATCAAGGAGATCCTGGCCCAGGTCGCCAG TGAGCATCTATGAGGGTGTTGGCAGCCCCATGGATCCAGAGAAGACCAAGCTCCAGTCCCGACCCCTCCCCCACCCCGTGGAAGAAGGGGTAGGGGTCCCTTGTTTGGGGCCAGGCCCAATCCTGCAC CTTGGGGGCTCCAGCCCCCCTCGAATTAAATTTCTACAGCATCCCTCTAGCTTTCCATCTCCCCAGCACCCCAACTGAGAAAAGTCACCCACCATGCTCTGCACACACACACACAACCCCAGGGCTTC GGAGGGCAGGTCACAACACGTGGATGTGGGAACACTGTGCATGGGCAGCATAACCCAGGACAGGAGGAGAACCCACAGCAGCTCACACCCACTGTGGGGAGTCACCCTACAGCGGCTCTCCAGGACCA GCCCCCAAACAACAAGGCAGAGAAAACCCACAGCCGACACACTGGGACTCCTGGCAGGTGTAACCATAAGTGCCCACACAGGCTGGCACCCTGCAGGGACACACCCATACTCTGGCAGGGGGCCCTCT GCCTGTCGCCTTCACATTCCTCCACTCCCACACTCATTCAGCTGAGGGGCCCTCCTGGAGGCAGCCCTTTGACCACCACTCAATCTGGACTTTTTAAATTAAAAAAGTGGAATTTGAATTTCAA
hide sequence
RefSeq Acc Id:
XM_021084117 ⟹ XP_020939776
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 75,093,071 - 75,098,566 (-) NCBI
Sequence:
TTTATTAGCATGCCGGGGGCGGGGTGGGGCGGAGCAGGCGGCAGGGGCGGGCTTGGAGCGGTTGGTTGGAGCGTCGCAGCAGCCGAGAGGTCCGGGAAAGTTTCTTTCGAGGTGCGGCCGGGAGCGGC CATGTCCCACGGCCCCAAGCAGCCCGGCGCGGCTGCCGCGTCGGCGAGCGGTAAGACTCCAGGACAGCACGGGGGATTCGTGGTTGCTGTCAAGCAAGAGCGCATCGAGGGCCCGCGGGCAGGAGAGA AGGGGTCCCACGAGGAGGAGCCGGTGAAGAAGCGCGGCTGGCCCAAGGGCAAGAAGCGGAAGAAGATCCTACCCAATGGGCCTAAGGCACCGGTCACCGGCTACGTGCGCTTCCTGAACGAGCGGCGT GAGCAGATTCGTACTCGCCACCCAGACCTGCCTTTTCCCGAGATTACCAAGATGCTGGGCGCGGAGTGGAGCAAGCTGCAGCCAGCGGAGAAGCAGCGGTACCTGGATGAGGCCGAACGGGAGAAGCA GCAGTACATGAAGGAGCTGAGAGCGTACCAGCAGTCCGAAGCCTACAAGATGTGCACGGAGAAGATACAGGAAAAGAAGATCAAGAAAGAAGACTCCGGCTCCGGGCTCATGAATACCCTTTTGAATG GACACAAGGGTGGGGACTGTGACGGCTTTTCCACCTTCGACGTCCCCATCTTCACTGAAGAATTCTTGGACCAAAACAAAGCTCGGGAGGCGGAGCTGCGGCGCCTGCGGAAGATGAACGTGGCCTTC GAGGAGCAGAATGCGGTGCTACAGAGGCACACACAGAGCATGAGCAGCGCGCGCGAGCGCCTGGAGCAGGAGCTGGCCTTGGAGGAGCGGCGGACGCTGGCACTACAGCAGCAGCTCCAGGCGGTGCG CCAGGCGCTCACCGCCAGCTTCGCGTCGTTGCCGGTGCCCGGCACAGGCGAGACGCCCACGCTCAGCACCCTGGACTTCTACATGGCCCGGCTGCACGGCGCCATCGAGCGCGACCCCGCCCAGCACG AGAAGCTTATCGTCCGCATCAAGGAGATCCTGGCCCAGGTCGCCAGGTGTGTTCCCTGTGAGCATCTATGAGGGTGTTGGCAGCCCCATGGATCCAGAGAAGACCAAGCTCCAGTCCCGACCCCTCCC CCACCCCGTGGAAGAAGGGGTAGGGGTCCCTTGTTTGGGGCCAGGCCCAATCCTGCACCTTGGGGGCTCCAGCCCCCCTCGAATTAAATTTCTACAGCATCCCTCTAGCTTTCCATCTCCCCAGCACC CCAACTGAGAAAAGTCACCCACCATGCTCTGCACACACACACACAACCCCAGGGCTTCGGAGGGCAGGTCACAACACGTGGATGTGGGAACACTGTGCATGGGCAGCATAACCCAGGACAGGAGGAGA ACCCACAGCAGCTCACACCCACTGTGGGGAGTCACCCTACAGCGGCTCTCCAGGACCAGCCCCCAAACAACAAGGCAGAGAAAACCCACAGCCGACACACTGGGACTCCTGGCAGGTGTAACCATAAG TGCCCACACAGGCTGGCACCCTGCAGGGACACACCCATACTCTGGCAGGGGGCCCTCTGCCTGTCGCCTTCACATTCCTCCACTCCCACACTCATTCAGCTGAGGGGCCCTCCTGGAGGCAGCCCTTT GACCACCACTCAATCTGGACTTTTTAAATTAAAAAAGTGGAATTTGAATTTCAA
hide sequence
RefSeq Acc Id:
XM_021084118 ⟹ XP_020939777
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 75,093,071 - 75,098,566 (-) NCBI
Sequence:
TTTATTAGCATGCCGGGGGCGGGGTGGGGCGGAGCAGGCGGCAGGGGCGGGCTTGGAGCGGTTG GTTGGAGCGTCGCAGCAGCCGAGAGGTCCGGGAAAGTTTCTTTCGAGGTGCGGCCGGGAGCGGCCATGTCCCACGGCCCCAAGCAGCCCGGCGCGGCTGCCGCGTCGGCGAGCGGTAAGACTCCAGGA CAGCACGGGGGATTCGTGGTTGCTGTCAAGCAAGAGCGCATCGAGGGCCCGCGGGCAGGAGAGAAGGGGTCCCACGAGGAGGAGCCGGTGAAGAAGCGCGGCTGGCCCAAGGGCAAGAAGCGGAAGAA GATCCTACCCAATGGGCCTAAGGCACCGGTCACCGGCTACGTGCGCTTCCTGAACGAGCGGCGTGAGCAGATTCGTACTCGCCACCCAGACCTGCCTTTTCCCGAGATTACCAAGATGCTGGGCGCGG AGTGGAGCAAGCTGCAGCCAGCGGAGAAGCAGCGGTACCTGGATGAGGCCGAACGGGAGAAGCAGCAGTACATGAAGGAGCTGAGAGCGTACCAGCAGTCCGAAGCCTACAAGATGTGCACGGAGAAG ATACAGGAAAAGAAGATCAAGAAAGACTCCGGCTCCGGGCTCATGAATACCCTTTTGAATGGACACAAGGGTGGGGACTGTGACGGCTTTTCCACCTTCGACGTCCCCATCTTCACTGAAGAATTCTT GGACCAAAACAAAGCTCGGGAGGCGGAGCTGCGGCGCCTGCGGAAGATGAACGTGGCCTTCGAGGAGCAGAATGCGGTGCTACAGAGGCACACACAGAGCATGAGCAGCGCGCGCGAGCGCCTGGAGC AGGAGCTGGCCTTGGAGGAGCGGCGGACGCTGGCACTACAGCAGCAGCTCCAGGCGGTGCGCCAGGCGCTCACCGCCAGCTTCGCGTCGTTGCCGGTGCCCGGCACAGGCGAGACGCCCACGCTCAGC ACCCTGGACTTCTACATGGCCCGGCTGCACGGCGCCATCGAGCGCGACCCCGCCCAGCACGAGAAGCTTATCGTCCGCATCAAGGAGATCCTGGCCCAGGTCGCCAGGTGTGTTCCCTGTGAGCATCT ATGAGGGTGTTGGCAGCCCCATGGATCCAGAGAAGACCAAGCTCCAGTCCCGACCCCTCCCCCACCCCGTGGAAGAAGGGGTAGGGGTCCCTTGTTTGGGGCCAGGCCCAATCCTGCACCTTGGGGGC TCCAGCCCCCCTCGAATTAAATTTCTACAGCATCCCTCTAGCTTTCCATCTCCCCAGCACCCCAACTGAGAAAAGTCACCCACCATGCTCTGCACACACACACACAACCCCAGGGCTTCGGAGGGCAG GTCACAACACGTGGATGTGGGAACACTGTGCATGGGCAGCATAACCCAGGACAGGAGGAGAACCCACAGCAGCTCACACCCACTGTGGGGAGTCACCCTACAGCGGCTCTCCAGGACCAGCCCCCAAA CAACAAGGCAGAGAAAACCCACAGCCGACACACTGGGACTCCTGGCAGGTGTAACCATAAGTGCCCACACAGGCTGGCACCCTGCAGGGACACACCCATACTCTGGCAGGGGGCCCTCTGCCTGTCGC CTTCACATTCCTCCACTCCCACACTCATTCAGCTGAGGGGCCCTCCTGGAGGCAGCCCTTTGACCACCACTCAATCTGGACTTTTTAAATTAAAAAAGTGGAATTTGAATTTCAA
hide sequence
RefSeq Acc Id:
XM_021084119 ⟹ XP_020939778
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 75,093,071 - 75,098,566 (-) NCBI
Sequence:
TTTATTAGCATGCCGGGGGCGGGGTGGGGCGGAGCAGGCGGCAGGGGCGGGCTTGGAGCGGTTGGTTGGAGCGTCGCAGCAGCCGAGAGGTCCGGGAAAGTTTCTTTCGAGGTGCGGCCGGGAGCGGC CATGTCCCACGGCCCCAAGCAGCCCGGCGCGGCTGCCGCGTCGGCGAGCGGTAAGACTCCAGGACAGCACGGGGGATTCGTGGTTGCTGTCAAGCAAGAGCGCATCGAGGGCCCGCGGGCAGGAGAGA AGGGGTCCCACGAGGAGGAGCCGGTGAAGAAGCGCGGCTGGCCCAAGGGCAAGAAGCGGAAGAAGATCCTACCCAATGGGCCTAAGGCACCGGTCACCGGCTACGTGCGCTTCCTGAACGAGCGGCGT GAGCAGATTCGTACTCGCCACCCAGACCTGCCTTTTCCCGAGATTACCAAGATGCTGGGCGCGGAGTGGAGCAAGCTGCAGCCAGCGGAGAAGCAGCGGTACCTGGATGAGGCCGAACGGGAGAAGCA GCAGTACATGAAGGAGCTGAGAGCGTACCAGCAGTCCGAAGCCTACAAGATGTGCACGGAGAAGATACAGGAAAAGAAGATCAAGAAAGAAGACTCCGGCTCCGGGCTCATGAATACCCTTTTGAATG GACACAAGGGTGGGGACTGTGACGGCTTTTCCACCTTCGACGTCCCCATCTTCACTGAAGAATTCTTGGACCAAAACAAAGCTCGGGAGGCGGAGCTGCGGCGCCTGCGGAAGATGAACGTGGCCTTC GAGGAGCAGAATGCGGTGCTACAGAGGCACACACAGAGCATGAGCAGCGCGCGCGAGCGCCTGGAGCAGGAGCTGGCCTTGGAGGAGCGGCGGACGCTGGCACTACAGCAGCAGCTCCAGGCGGTGCG CCAGGCGCTCACCGCCAGCTTCGCGTCGTTGCCGGTGCCCGGCACAGGCGAGACGCCCACGCTCAGCACCCTGGACTTCTACATGGCCCGGCTGCACGGCGCCATCGAGCGCGACCCCGCCCAGCACG AGAAGCTTATCGTCCGCATCAAGGAGATCCTGGCCCAGGTCGCCAGTGAGCATCTATGAGGGTGTTGGCAGCCCCATGGATCCAGAGAAGACCAAGCTCCAGTCCCGACCCCTCCCCCACCCCGTGGA AGAAGGGGTAGGGGTCCCTTGTTTGGGGCCAGGCCCAATCCTGCACCTTGGGGGCTCCAGCCCCCCTCGAATTAAATTTCTACAGCATCCCTCTAGCTTTCCATCTCCCCAGCACCCCAACTGAGAAA AGTCACCCACCATGCTCTGCACACACACACACAACCCCAGGGCTTCGGAGGGCAGGTCACAACACGTGGATGTGGGAACACTGTGCATGGGCAGCATAACCCAGGACAGGAGGAGAACCCACAGCAGC TCACACCCACTGTGGGGAGTCACCCTACAGCGGCTCTCCAGGACCAGCCCCCAAACAACAAGGCAGAGAAAACCCACAGCCGACACACTGGGACTCCTGGCAGGTGTAACCATAAGTGCCCACACAGG CTGGCACCCTGCAGGGACACACCCATACTCTGGCAGGGGGCCCTCTGCCTGTCGCCTTCACATTCCTCCACTCCCACACTCATTCAGCTGAGGGGCCCTCCTGGAGGCAGCCCTTTGACCACCACTCA ATCTGGACTTTTTAAATTAAAAAAGTGGAATTTGAATTTCAA
hide sequence
RefSeq Acc Id:
XM_021084120 ⟹ XP_020939779
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 75,093,071 - 75,098,566 (-) NCBI
Sequence:
TTTATTAGCATGCCGGGGGCGGGGTGGGGCGGAGCAGGCGGCAGGGGCGGGCTTGGAGCGGTTG GTTGGAGCGTCGCAGCAGCCGAGAGGTCCGGGAAAGTTTCTTTCGAGGTGCGGCCGGGAGCGGCCATGTCCCACGGCCCCAAGCAGCCCGGCGCGGCTGCCGCGTCGGCGAGCGGTAAGACTCCAGGA CAGCACGGGGGATTCGTGGTTGCTGTCAAGCAAGAGCGCATCGAGGGCCCGCGGGCAGGAGAGAAGGGGTCCCACGAGGAGGAGCCGGTGAAGAAGCGCGGCTGGCCCAAGGGCAAGAAGCGGAAGAA GATCCTACCCAATGGGCCTAAGGCACCGGTCACCGGCTACGTGCGCTTCCTGAACGAGCGGCGTGAGCAGATTCGTACTCGCCACCCAGACCTGCCTTTTCCCGAGATTACCAAGATGCTGGGCGCGG AGTGGAGCAAGCTGCAGCCAGCGGAGAAGCAGCGGTACCTGGATGAGGCCGAACGGGAGAAGCAGCAGTACATGAAGGAGCTGAGAGCGTACCAGCAGTCCGAAGCCTACAAGATGTGCACGGAGAAG ATACAGGAAAAGAAGATCAAGAAAGACTCCGGCTCCGGGCTCATGAATACCCTTTTGAATGGACACAAGGGTGGGGACTGTGACGGCTTTTCCACCTTCGACGTCCCCATCTTCACTGAAGAATTCTT GGACCAAAACAAAGCTCGGGAGGCGGAGCTGCGGCGCCTGCGGAAGATGAACGTGGCCTTCGAGGAGCAGAATGCGGTGCTACAGAGGCACACACAGAGCATGAGCAGCGCGCGCGAGCGCCTGGAGC AGGAGCTGGCCTTGGAGGAGCGGCGGACGCTGGCACTACAGCAGCAGCTCCAGGCGGTGCGCCAGGCGCTCACCGCCAGCTTCGCGTCGTTGCCGGTGCCCGGCACAGGCGAGACGCCCACGCTCAGC ACCCTGGACTTCTACATGGCCCGGCTGCACGGCGCCATCGAGCGCGACCCCGCCCAGCACGAGAAGCTTATCGTCCGCATCAAGGAGATCCTGGCCCAGGTCGCCAGTGAGCATCTATGAGGGTGTTG GCAGCCCCATGGATCCAGAGAAGACCAAGCTCCAGTCCCGACCCCTCCCCCACCCCGTGGAAGAAGGGGTAGGGGTCCCTTGTTTGGGGCCAGGCCCAATCCTGCACCTTGGGGGCTCCAGCCCCCCT CGAATTAAATTTCTACAGCATCCCTCTAGCTTTCCATCTCCCCAGCACCCCAACTGAGAAAAGTCACCCACCATGCTCTGCACACACACACACAACCCCAGGGCTTCGGAGGGCAGGTCACAACACGT GGATGTGGGAACACTGTGCATGGGCAGCATAACCCAGGACAGGAGGAGAACCCACAGCAGCTCACACCCACTGTGGGGAGTCACCCTACAGCGGCTCTCCAGGACCAGCCCCCAAACAACAAGGCAGA GAAAACCCACAGCCGACACACTGGGACTCCTGGCAGGTGTAACCATAAGTGCCCACACAGGCTGGCACCCTGCAGGGACACACCCATACTCTGGCAGGGGGCCCTCTGCCTGTCGCCTTCACATTCCT CCACTCCCACACTCATTCAGCTGAGGGGCCCTCCTGGAGGCAGCCCTTTGACCACCACTCAATCTGGACTTTTTAAATTAAAAAAGTGGAATTTGAATTTCAA
hide sequence
RefSeq Acc Id:
XP_020939779 ⟸ XM_021084120
- Peptide Label:
isoform X5
- UniProtKB:
A0A8D0N273 (UniProtKB/TrEMBL)
- Sequence:
MPGAGWGGAGGRGGLGAVGWSVAAAERSGKVSFEVRPGAAMSHGPKQPGAAAASASGKTPGQHGGFVVAVKQERIEGPRAGEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQI RTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKDSGSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQN AVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLSTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL
hide sequence
RefSeq Acc Id:
XP_020939777 ⟸ XM_021084118
- Peptide Label:
isoform X3
- UniProtKB:
A0A8D0N273 (UniProtKB/TrEMBL)
- Sequence:
MPGAGWGGAGGRGGLGAVGWSVAAAERSGKVSFEVRPGAAMSHGPKQPGAAAASASGKTPGQHGGFVVAVKQERIEGPRAGEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQI RTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKDSGSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQN AVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLSTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVARCVPCEHL
hide sequence
RefSeq Acc Id:
XP_020939778 ⟸ XM_021084119
- Peptide Label:
isoform X4
- UniProtKB:
A0A4X1VUF0 (UniProtKB/TrEMBL), A0A8D0N273 (UniProtKB/TrEMBL)
- Sequence:
MPGAGWGGAGGRGGLGAVGWSVAAAERSGKVSFEVRPGAAMSHGPKQPGAAAASASGKTPGQHGGFVVAVKQERIEGPRAGEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQI RTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSGSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQ NAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLSTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL
hide sequence
RefSeq Acc Id:
XP_020939776 ⟸ XM_021084117
- Peptide Label:
isoform X2
- UniProtKB:
A0A8D0N273 (UniProtKB/TrEMBL)
- Sequence:
MPGAGWGGAGGRGGLGAVGWSVAAAERSGKVSFEVRPGAAMSHGPKQPGAAAASASGKTPGQHGGFVVAVKQERIEGPRAGEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQI RTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSGSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQ NAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLSTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVARCVPCEHL
hide sequence
RefSeq Acc Id:
XP_020939775 ⟸ XM_021084116
- Peptide Label:
isoform X1
- Sequence:
MPGAGWGGAGGRGGLGAVGWSVAAAERSGKVSFEVKTAAEVGALRESGGRGGPRIRAGPLPSRGLRTWVSWGAIVQQRIPGAPALEGLPVPGSCPPRHSGAPQPDPAVSCSRDPHSATIVLSRSASGK TPGQHGGFVVAVKQERIEGPRAGEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEREKQQYMKELRAYQQSEAYKMC TEKIQEKKIKKEDSGSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTASFASLPVPGTGET PTLSTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL
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Ensembl Acc Id:
ENSSSCP00000045693 ⟸ ENSSSCT00000045156
Ensembl Acc Id:
ENSSSCP00000031815 ⟸ ENSSSCT00000057853