Gene: Trpc6 (transient receptor potential cation channel, subfamily C, member 6) Rattus norvegicus
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Symbol: Trpc6
Name: transient receptor potential cation channel, subfamily C, member 6
Description: ENCODES a protein that exhibits actin binding; actinin binding; ATPase binding; INVOLVED IN aging; cellular response to hydrogen peroxide; cellular response to hypoxia; PARTICIPATES IN endothelin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria; Diabetic Nephropathies; focal segmental glomerulosclerosis; FOUND IN plasma membrane; cytoplasm (ortholog); membrane (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol; 6-propyl-2-thiouracil
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: short transient receptor potential channel 6; transient receptor protein 6; Trrp6
Orthologs:
Homo sapiens (human) : TRPC6 (transient receptor potential cation channel subfamily C member 6)  HGNC  Alliance
Mus musculus (house mouse) : Trpc6 (transient receptor potential cation channel, subfamily C, member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trpc6 (transient receptor potential cation channel subfamily C member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : TRPC6 (transient receptor potential cation channel subfamily C member 6)
Canis lupus familiaris (dog) : TRPC6 (transient receptor potential cation channel subfamily C member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trpc6 (transient receptor potential cation channel subfamily C member 6)
Sus scrofa (pig) : TRPC6 (transient receptor potential cation channel subfamily C member 6)
more info ...
Allele / Splice: Trpc6em3Mcwi   Trpc6em4Mcwi   Trpc6em1Mcwi  
Genetic Models: SS-Trpc6em1Mcwi SS-Trpc6em4Mcwi SS-Trpc6em3Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.086,811,543 - 6,917,534 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.086,799,564 - 6,904,623 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.485,472,515 - 5,577,537 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.185,472,514 - 5,577,536 (+)NCBI
Celera87,300,179 - 7,404,007 (+)NCBICelera
Cytogenetic Map8q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

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Genomics

Comparative Map Data
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QTLs in Region (Rnor_6.0)
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miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
  
More on Trpc6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619788
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE



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