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ONTOLOGY REPORT - ANNOTATIONS

Term:lymphocyte activation
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Accession:GO:0046649 term browser browse the term
Definition:A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor.

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lymphocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase acts_upstream_of ISO (PMID:11452127) MGI PMID:11452127 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12818158) MGI PMID:12818158 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (PMID:15843560) MGI PMID:15843560 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Lax1 lymphocyte transmembrane adaptor 1 acts_upstream_of_or_within ISO (PMID:15843560) MGI PMID:15843560 NCBI chrNW_004955406:39,656,549...39,667,448
Ensembl chrNW_004955406:39,656,128...39,670,244 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of ISO (PMID:11452127) MGI PMID:11452127 NCBI chrNW_004955470:2,065,468...2,167,909
Ensembl chrNW_004955470:2,065,411...2,167,909 		JBrowse link
G Slc39a6 solute carrier family 39 member 6 involved_in ISO (PMID:30552163) UniProt PMID:30552163 NCBI chrNW_004955402:22,670,598...22,698,455
Ensembl chrNW_004955402:22,670,437...22,698,591 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase acts_upstream_of ISO (PMID:11452127) MGI PMID:11452127 NCBI chrNW_004955416:8,361,722...8,377,629
Ensembl chrNW_004955416:8,359,207...8,377,692 		JBrowse link
activated CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf18 TNF superfamily member 18 NOT|involved_in ISO (MGI:5551556|PMID:24107315) UniProt PMID:24107315 MGI:5551556 NCBI chrNW_004955406:13,391,162...13,402,479 JBrowse link
activated T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Cadm1 cell adhesion molecule 1 NOT|involved_in ISO (PMID:15811952) UniProt PMID:15811952 NCBI chrNW_004955412:16,673,401...17,005,082
Ensembl chrNW_004955412:16,669,099...17,005,014 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule NOT|involved_in ISO (PMID:15811952) HGNC-UCL PMID:15811952 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262 		JBrowse link
G Ephb6 EPH receptor B6 acts_upstream_of_or_within ISO (PMID:15599401) MGI PMID:15599401 NCBI chrNW_004955494:812,482...820,679
Ensembl chrNW_004955494:812,855...820,475 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:1516132) MGI PMID:1516132 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial acts_upstream_of ISO (PMID:18971390) MGI PMID:18971390 NCBI chrNW_004955431:17,291,890...17,363,611
Ensembl chrNW_004955431:17,291,270...17,363,714 		JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO (PMID:1830926)
(PMID:10485657), (PMID:7584142)		 MGI PMID:1830926 PMID:7584142 PMID:10485657 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of ISO (PMID:7584142) MGI PMID:7584142 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:10485657), (PMID:9841920) MGI PMID:9841920 PMID:10485657 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Itgad integrin subunit alpha D acts_upstream_of_or_within ISO (PMID:15210787) MGI PMID:15210787 NCBI chrNW_004955493:8,233,098...8,260,613 JBrowse link
G Itgal integrin subunit alpha L acts_upstream_of_or_within ISO (PMID:15210787) MGI PMID:15210787 NCBI chrNW_004955493:7,397,813...7,435,420
Ensembl chrNW_004955493:7,397,991...7,439,070 		JBrowse link
G Itgam integrin subunit alpha M acts_upstream_of_or_within ISO (PMID:15210787) MGI PMID:15210787 NCBI chrNW_004955493:8,116,886...8,160,806
Ensembl chrNW_004955493:8,116,834...8,260,759 		JBrowse link
G Itgax integrin subunit alpha X NOT|acts_upstream_of_or_within ISO (PMID:15210787) MGI PMID:15210787 NCBI chrNW_004955493:8,196,593...8,220,296 JBrowse link
G Itgb2 integrin subunit beta 2 acts_upstream_of_or_within ISO (PMID:15210787) MGI PMID:15210787 NCBI chrNW_004955407:41,779,849...41,805,637
Ensembl chrNW_004955407:41,777,777...41,800,201 		JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:15814699) MGI PMID:15814699 NCBI chrNW_004955430:10,587,539...10,683,887
Ensembl chrNW_004955430:10,587,539...10,683,887 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO (PMID:10072077), (PMID:10485657) MGI PMID:10072077 PMID:10485657 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO (PMID:9841920)
(PMID:10072077), (PMID:10485657)		 MGI PMID:9841920 PMID:10072077 PMID:10485657 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Ins insulin involved_in ISO (PMID:10604997) UniProt PMID:10604997 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419 		JBrowse link
alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955406:18,435,984...18,527,967
Ensembl chrNW_004955406:18,437,672...18,527,698 		JBrowse link
G Ada adenosine deaminase acts_upstream_of ISO (PMID:11067867), (PMID:12163459), (PMID:16670300)
(PMID:11067867), (PMID:16670300)		 MGI PMID:11067867 PMID:12163459 PMID:16670300 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Anxa1 annexin A1 involved_in ISO (MGI:4943619|PMID:20139728) BHF-UCL PMID:20139728 MGI:4943619 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:12717433) MGI PMID:12717433 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15855276) MGI PMID:15855276 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Prr7 proline rich 7, synaptic involved_in ISO (PMID:27657535) MGI PMID:27657535 NCBI chrNW_004955408:29,685,254...29,695,113
Ensembl chrNW_004955408:29,692,004...29,695,113 		JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
G Rpl22 ribosomal protein L22 acts_upstream_of_or_within ISO (PMID:17555992) MGI PMID:17555992 NCBI chrNW_004955486:6,302,092...6,310,789
Ensembl chrNW_004955486:6,302,092...6,310,789 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO (PMID:10981962) MGI PMID:10981962 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of ISO (PMID:9275205)
(PMID:7630421)
(PMID:9208839)		 MGI PMID:7630421 PMID:9208839 PMID:9275205 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A involved_in ISO (MGI:5640904|PMID:25398325) CACAO PMID:25398325 MGI:5640904 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of ISO (PMID:23487419) MGI PMID:23487419 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:16945588) MGI PMID:16945588 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of ISO (PMID:7751624) MGI PMID:7751624 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
B cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bank1 B cell scaffold protein with ankyrin repeats 1 involved_in ISO (PMID:11782428) UniProt PMID:11782428 NCBI chrNW_004955496:6,267,618...6,511,195
Ensembl chrNW_004955496:6,267,551...6,470,948 		JBrowse link
G Cd22 CD22 molecule involved_in ISO (PMID:26017478) ARUK-UCL PMID:26017478 NCBI chrNW_004955468:4,609,601...4,622,601
Ensembl chrNW_004955468:4,612,044...4,625,882 		JBrowse link
G Cd40 CD40 molecule acts_upstream_of_or_within ISO (PMID:14594818), (PMID:16546095) RGD
MGI		 PMID:14594818 PMID:16546095 PMID:27692815 RGD:14398462 NCBI chrNW_004955445:11,191,817...11,202,156
Ensembl chrNW_004955445:11,190,603...11,202,093 		JBrowse link
G Cd79a CD79a molecule involved_in ISO (MGI:3686551|PMID:16860757) UniProt PMID:16860757 MGI:3686551 NCBI chrNW_004955555:961,522...965,605
Ensembl chrNW_004955555:961,522...965,605 		JBrowse link
G Cd86 CD86 molecule involved_in
acts_upstream_of_or_within		 ISO (MGI:5461234|PMID:23241883)
(PMID:19734906)		 UniProt
MGI		 PMID:19734906 PMID:23241883 MGI:5461234 NCBI chrNW_004955427:21,375,820...21,436,767
Ensembl chrNW_004955427:21,375,794...21,435,874 		JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit acts_upstream_of_or_within ISO (PMID:15963492) MGI PMID:15963492 NCBI chrNW_004955528:825,314...840,994
Ensembl chrNW_004955528:825,308...841,270 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit acts_upstream_of_or_within ISO (PMID:15963492), (PMID:16253349) MGI PMID:15963492 PMID:16253349 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15963492), (PMID:16253349) MGI PMID:15963492 PMID:16253349 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526 		JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (PMID:24803541) ARUK-UCL PMID:24803541 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445 		JBrowse link
G Fcrl1 Fc receptor like 1 involved_in ISO (PMID:15479727) UniProt PMID:15479727 NCBI chrNW_004955468:9,641,739...9,660,743
Ensembl chrNW_004955468:9,645,106...9,660,644 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:8566034) MGI PMID:8566034 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Lat2 linker for activation of T cells family member 2 involved_in ISO (PMID:12514734) HGNC-UCL PMID:12514734 NCBI chrNW_004955456:13,674,190...13,688,611 JBrowse link
G Lax1 lymphocyte transmembrane adaptor 1 involved_in ISO (PMID:12359715) HGNC-UCL PMID:12359715 NCBI chrNW_004955406:39,656,549...39,667,448
Ensembl chrNW_004955406:39,656,128...39,670,244 		JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:14576442) MGI PMID:14576442 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
G Ms4a1 membrane spanning 4-domains A1 involved_in ISO (PMID:3925015) UniProt PMID:3925015 NCBI chrNW_004955511:5,252,934...5,263,961
Ensembl chrNW_004955511:5,258,341...5,267,113 		JBrowse link
G Pfdn1 prefoldin subunit 1 acts_upstream_of_or_within ISO (PMID:18566413) MGI PMID:18566413 NCBI chrNW_004955418:351,078...414,292 JBrowse link
G Phb1 prohibitin 1 involved_in ISO (MGI:5461234|PMID:23241883) UniProt PMID:23241883 MGI:5461234 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124 		JBrowse link
G Phb2 prohibitin 2 involved_in ISO (MGI:5461234|PMID:23241883) UniProt PMID:23241883 MGI:5461234 NCBI chrNW_004955413:4,557,969...4,563,697
Ensembl chrNW_004955413:4,558,259...4,563,582 		JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta acts_upstream_of_or_within ISO (PMID:12235209) MGI PMID:12235209 NCBI chrNW_004955486:3,813,923...3,837,563
Ensembl chrNW_004955486:3,813,923...3,838,119 		JBrowse link
G Prkcb protein kinase C beta involved_in ISO (MGI:3626015|PMID:12118249) UniProt PMID:12118249 MGI:3626015 NCBI chrNW_004955493:2,395,494...2,710,522
Ensembl chrNW_004955493:2,395,109...2,710,934 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:27776107), (PMID:29155103) UniProt PMID:27776107 PMID:29155103 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Tbc1d10c TBC1 domain family member 10C acts_upstream_of ISO (PMID:23109291) MGI PMID:23109291 NCBI chrNW_004955422:18,069,686...18,075,795
Ensembl chrNW_004955422:18,069,686...18,075,794 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of ISO (PMID:12855817) MGI PMID:12855817 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513 		JBrowse link
G Txlna taxilin alpha acts_upstream_of_or_within ISO (PMID:9798653) MGI PMID:9798653 NCBI chrNW_004955452:10,548,858...10,565,996
Ensembl chrNW_004955452:10,548,860...10,568,273 		JBrowse link
B cell activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifnb1 interferon beta 1 involved_in ISO (PMID:12932356) UniProt PMID:12932356 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase acts_upstream_of_or_within ISO (PMID:7680896) MGI PMID:7680896 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:20543113) MGI PMID:20543113 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
B cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd320 CD320 molecule involved_in ISO (PMID:10727470) UniProt PMID:10727470 NCBI chrNW_004955563:1,084,523...1,089,395
Ensembl chrNW_004955563:1,084,474...1,093,111 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of_or_within ISO (PMID:15240667) MGI PMID:15240667 NCBI chrNW_004955413:27,341,977...27,344,009 JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO (PMID:15240667) MGI PMID:15240667 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (MGI:3828349|PMID:17371977) BHF-UCL PMID:17371977 MGI:3828349 NCBI chrNW_004955487:5,180,241...5,218,298
Ensembl chrNW_004955487:5,180,252...5,218,216 		JBrowse link
G Adgrg3 adhesion G protein-coupled receptor G3 involved_in ISO (MGI:5645196|PMID:24113187) UniProt PMID:24113187 MGI:5645196 NCBI chrNW_004955433:15,290,538...15,317,020
Ensembl chrNW_004955433:15,290,394...15,319,361 		JBrowse link
G Aqp8 aquaporin 8 involved_in ISO (MGI:5907956|PMID:27256569) UniProt PMID:27256569 MGI:5907956 NCBI chrNW_004955493:3,550,697...3,558,875
Ensembl chrNW_004955493:3,550,120...3,559,206 		JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:12717432) MGI PMID:12717432 NCBI chrNW_004955424:23,233,523...23,330,679
Ensembl chrNW_004955424:23,233,523...23,330,679 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8170972), (PMID:9028316) MGI PMID:8170972 PMID:9028316 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:14647274) MGI PMID:14647274 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12818158) MGI PMID:12818158 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cd40lg CD40 ligand acts_upstream_of_or_within ISO (PMID:14647274) MGI PMID:14647274 NCBI chrNW_004955489:8,465,571...8,477,714
Ensembl chrNW_004955489:8,465,164...8,477,746 		JBrowse link
G Cd79a CD79a molecule involved_in ISO (MGI:2149180|PMID:11514602), (MGI:2687348|PMID:12097390) UniProt PMID:11514602 PMID:12097390 MGI:2149180 MGI:2687348 NCBI chrNW_004955555:961,522...965,605
Ensembl chrNW_004955555:961,522...965,605 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (MGI:3531365|PMID:15688343) UniProt PMID:15688343 MGI:3531365 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128 		JBrowse link
G Cebpg CCAAT enhancer binding protein gamma involved_in ISO (MGI:3687437|PMID:1431100) UniProt PMID:1431100 MGI:3687437 NCBI chrNW_004955468:3,137,106...3,141,733
Ensembl chrNW_004955468:3,137,106...3,141,733 		JBrowse link
G Clcf1 cardiotrophin like cytokine factor 1 acts_upstream_of_or_within ISO (PMID:10500198) MGI PMID:10500198 NCBI chrNW_004955422:18,097,779...18,108,628
Ensembl chrNW_004955422:18,097,779...18,108,628 		JBrowse link
G Cr2 complement C3d receptor 2 involved_in ISO (PMID:2995485) UniProt PMID:2995485 NCBI chrNW_004955406:42,877,041...42,910,970
Ensembl chrNW_004955406:42,876,966...42,911,564 		JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in ISO (MGI:5314150|PMID:22157821) UniProt PMID:22157821 MGI:5314150 NCBI chrNW_004955532:3,085,386...3,153,952
Ensembl chrNW_004955532:3,085,386...3,154,671 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO (PMID:12504013) MGI PMID:12504013 NCBI chrNW_004955429:19,461,446...19,501,908
Ensembl chrNW_004955429:19,461,528...19,505,321 		JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in ISO (MGI:5644772|PMID:25222125) UniProt PMID:25222125 MGI:5644772 NCBI chrNW_004955410:12,814,993...12,820,852
Ensembl chrNW_004955410:12,814,479...12,822,777 		JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO (PMID:18684867) MGI PMID:18684867 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:23531880) MGI PMID:23531880 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 involved_in ISO (MGI:4946600|PMID:21228325) UniProt PMID:21228325 MGI:4946600 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Fnip1 folliculin interacting protein 1 involved_in ISO (PMID:32905580) UniProt PMID:32905580 NCBI chrNW_004955408:3,117,258...3,238,223
Ensembl chrNW_004955408:3,117,277...3,238,223 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:28566276) MGI PMID:28566276 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180 		JBrowse link
G Fzd9 frizzled class receptor 9 acts_upstream_of_or_within ISO (PMID:15572594) MGI PMID:15572594 NCBI chrNW_004955456:14,245,994...14,247,551
Ensembl chrNW_004955456:14,246,324...14,247,550 		JBrowse link
G Gon4l gon-4 like acts_upstream_of_or_within ISO (PMID:20530203) MGI PMID:20530203 NCBI chrNW_004955545:1,990,202...2,054,614 JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (MGI:5896692|PMID:28039360) UniProt PMID:28039360 MGI:5896692 NCBI chrNW_004955467:9,600,829...9,604,148
Ensembl chrNW_004955467:9,600,829...9,603,606 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:12522149) MGI PMID:12522149 NCBI chrNW_004955425:737,506...742,775
Ensembl chrNW_004955425:735,378...742,775 		JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:32341372) MGI PMID:32341372 NCBI chrNW_004955437:2,478,414...2,486,809
Ensembl chrNW_004955437:2,478,414...2,486,809 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:18523151) MGI PMID:18523151 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:23071339)
(PMID:7923373)		 MGI PMID:7923373 PMID:23071339 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (MGI:6740265|PMID:34155405) UniProt PMID:34155405 MGI:6740265 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:9252128) MGI PMID:9252128 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Il9 interleukin 9 acts_upstream_of_or_within ISO (PMID:30082831) MGI PMID:30082831 NCBI chrNW_004955408:30,950,816...30,953,571
Ensembl chrNW_004955408:30,950,816...30,953,571 		JBrowse link
G Il9r interleukin 9 receptor acts_upstream_of_or_within ISO (PMID:30082831) MGI PMID:30082831 NCBI chrNW_004955442:17,115,207...17,128,899
Ensembl chrNW_004955442:17,117,429...17,127,451 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (MGI:3655405|PMID:9498750) BHF-UCL PMID:9498750 MGI:3655405 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Lyl1 LYL1 basic helix-loop-helix family member involved_in ISO (MGI:3693935|PMID:16514064) UniProt PMID:16514064 MGI:3693935 NCBI chrNW_004955415:32,121,808...32,124,730
Ensembl chrNW_004955415:32,121,808...32,124,730 		JBrowse link
G Ms4a1 membrane spanning 4-domains A1 involved_in ISO (PMID:3925015) UniProt PMID:3925015 NCBI chrNW_004955511:5,252,934...5,263,961
Ensembl chrNW_004955511:5,258,341...5,267,113 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO (PMID:9697843) MGI PMID:9697843 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698 		JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:17927961) MGI PMID:17927961 NCBI chrNW_004955439:1,523,516...1,560,185
Ensembl chrNW_004955439:1,521,292...1,560,220 		JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 involved_in ISO (MGI:3044463|PMID:15143214) HGNC-UCL PMID:15143214 MGI:3044463 NCBI chrNW_004955413:27,865,672...27,893,793
Ensembl chrNW_004955413:27,866,271...27,893,844 		JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in ISO (PMID:16439204) UniProt PMID:16439204 NCBI chrNW_004955453:14,278,773...14,362,167
Ensembl chrNW_004955453:14,281,069...14,363,876 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO (PMID:12682228) MGI PMID:12682228 NCBI chrNW_004955507:5,454,871...5,457,247
Ensembl chrNW_004955507:5,455,087...5,457,660 		JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:15459109) MGI PMID:15459109 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579 		JBrowse link
G Onecut1 one cut homeobox 1 acts_upstream_of_or_within ISO (PMID:12874218) MGI PMID:12874218 NCBI chrNW_004955409:2,181,364...2,214,636
Ensembl chrNW_004955409:2,181,346...2,207,888 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within ISO (PMID:9988280) MGI PMID:9988280 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (MGI:1861532|PMID:10925250) UniProt PMID:10925250 MGI:1861532 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986 		JBrowse link
G Polm DNA polymerase mu acts_upstream_of_or_within ISO (PMID:15789338) MGI PMID:15789338 NCBI chrNW_004955456:7,886,182...7,893,800
Ensembl chrNW_004955456:7,886,291...7,895,085 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:9300691) MGI PMID:9300691 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (MGI:1096020|PMID:9271584) UniProt PMID:9271584 MGI:1096020 NCBI chrNW_004955402:771,410...846,671 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within		 ISO (MGI:3521537|PMID:15557316), (MGI:3774343|PMID:18249142)
(PMID:12902479), (PMID:8666928)
(PMID:9254656)		 ARUK-UCL
MGI		 PMID:8666928 PMID:9254656 PMID:12902479 PMID:15557316 PMID:18249142 MGI:3521537 MGI:3774343 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J involved_in ISO (MGI:3774343|PMID:18249142) ARUK-UCL PMID:18249142 MGI:3774343 NCBI chrNW_004955422:396,266...438,792
Ensembl chrNW_004955422:399,357...443,054 		JBrowse link
G Rabl3 RAB, member of RAS oncogene family like 3 involved_in ISO (MGI:6405642|PMID:32220963) UniProt PMID:32220963 MGI:6405642 NCBI chrNW_004955427:20,204,901...20,242,242
Ensembl chrNW_004955427:20,204,901...20,242,242 		JBrowse link
G Rag1 recombination activating 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:50458|PMID:1547488)
(PMID:11976687)		 UniProt
MGI		 PMID:1547488 PMID:11976687 MGI:50458 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rag2 recombination activating 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:50458|PMID:1547488), (MGI:50459|PMID:1547487)
(PMID:11980719), (PMID:14595002)		 UniProt
MGI		 PMID:1547487 PMID:1547488 PMID:11980719 PMID:14595002 MGI:50458 MGI:50459 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (PMID:11967543) MGI PMID:11967543 NCBI chrNW_004955443:18,783,061...19,029,441
Ensembl chrNW_004955443:18,783,061...18,910,228 		JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISO (MGI:5790407|PMID:25613378) UniProt PMID:25613378 MGI:5790407 NCBI chrNW_004955534:497,518...500,309
Ensembl chrNW_004955534:496,933...510,934 		JBrowse link
G Slc39a7 solute carrier family 39 member 7 involved_in ISO (PMID:30718914)
(MGI:6380779|PMID:30718914)		 UniProt PMID:30718914 MGI:6380779 NCBI chrNW_004955437:1,774,301...1,778,092
Ensembl chrNW_004955437:1,774,301...1,778,092 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chrNW_004955449:1,347,781...1,404,368 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO (PMID:10979977) MGI PMID:10979977 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO (PMID:10979977) MGI PMID:10979977 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of ISO (PMID:7477353)
(PMID:7477352)		 MGI PMID:7477352 PMID:7477353 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:15284856), (PMID:16797412)
(PMID:15294947)		 MGI PMID:15284856 PMID:15294947 PMID:16797412 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
G Tnfsf13b TNF superfamily member 13b involved_in
acts_upstream_of_or_within		 ISO (PMID:18624351)
(PMID:17581616)		 MGI PMID:17581616 PMID:18624351 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:31409799), (PMID:32128574)
(MGI:6362312|PMID:31409799)		 UniProt PMID:31409799 PMID:32128574 MGI:6362312 NCBI chrNW_004955430:17,457,603...17,523,115
Ensembl chrNW_004955430:17,457,603...17,507,012 		JBrowse link
G Tpd52 tumor protein D52 involved_in ISO (PMID:15576473) UniProt PMID:15576473 NCBI chrNW_004955444:1,230,730...1,261,839
Ensembl chrNW_004955444:1,230,730...1,264,526 		JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO (PMID:9300691) MGI PMID:9300691 NCBI chrNW_004955438:4,601,765...4,758,922
Ensembl chrNW_004955438:4,614,584...4,761,582 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23531880) MGI PMID:23531880 NCBI chrNW_004955438:21,341,374...21,377,674 JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within ISO (PMID:22201126) MGI PMID:22201126 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A involved_in ISO (MGI:3710692|PMID:17495164) UniProt PMID:17495164 MGI:3710692 NCBI chrNW_004955495:4,747,905...4,754,066
Ensembl chrNW_004955495:4,740,901...4,753,992 		JBrowse link
B cell homeostatic proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:7569956) MGI PMID:7569956 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:9052834) MGI PMID:9052834 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Tcf3 transcription factor 3 involved_in ISO (PMID:15030778) UniProt PMID:15030778 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
B cell negative selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (PMID:16055554) MGI PMID:16055554 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:16055554) MGI PMID:16055554 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
B cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:19228876) MGI PMID:19228876 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Ada adenosine deaminase acts_upstream_of ISO (PMID:14607964) MGI PMID:14607964 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:1373874) MGI PMID:1373874 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of ISO (PMID:9171827) MGI PMID:9171827 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:12867038)
(PMID:12818158)		 MGI PMID:12818158 PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of ISO (PMID:8920854) MGI PMID:8920854 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cd38 CD38 molecule acts_upstream_of ISO (PMID:8666928) MGI PMID:8666928 NCBI chrNW_004955480:8,177,178...8,218,483
Ensembl chrNW_004955480:8,178,473...8,217,643 		JBrowse link
G Cd40 CD40 molecule acts_upstream_of ISO (PMID:10979977), (PMID:11894097), (PMID:14607964), (PMID:8666928), (PMID:8920854)
(PMID:15963492)		 MGI PMID:8666928 PMID:8920854 PMID:10979977 PMID:11894097 PMID:14607964 More... NCBI chrNW_004955445:11,191,817...11,202,156
Ensembl chrNW_004955445:11,190,603...11,202,093 		JBrowse link
G Cd40lg CD40 ligand involved_in ISO (PMID:8605945) UniProt PMID:8605945 NCBI chrNW_004955489:8,465,571...8,477,714
Ensembl chrNW_004955489:8,465,164...8,477,746 		JBrowse link
G Cd79a CD79a molecule involved_in ISO (MGI:3686551|PMID:16860757) UniProt PMID:16860757 MGI:3686551 NCBI chrNW_004955555:961,522...965,605
Ensembl chrNW_004955555:961,522...965,605 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of ISO (PMID:15963492) MGI PMID:15963492 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526 		JBrowse link
G Cr2 complement C3d receptor 2 involved_in ISO (PMID:2995485) UniProt PMID:2995485 NCBI chrNW_004955406:42,877,041...42,910,970
Ensembl chrNW_004955406:42,876,966...42,911,564 		JBrowse link
G Ctps1 CTP synthase 1 involved_in ISO (PMID:24870241) UniProt PMID:24870241 NCBI chrNW_004955537:773,664...811,084
Ensembl chrNW_004955537:774,002...813,254 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of ISO (PMID:12385742) MGI PMID:12385742 NCBI chrNW_004955462:14,639,396...14,653,801 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:28566276) MGI PMID:28566276 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (MGI:2680725|PMID:14597717) UniProt PMID:14597717 MGI:2680725 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:10979977), (PMID:14607964) MGI PMID:10979977 PMID:14607964 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il7 interleukin 7 acts_upstream_of ISO (PMID:7671324) MGI PMID:7671324 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO (PMID:15909309) MGI PMID:15909309 NCBI chrNW_004955426:20,785,896...20,818,512
Ensembl chrNW_004955426:20,787,471...20,818,577 		JBrowse link
G Il9 interleukin 9 acts_upstream_of_or_within ISO (PMID:30082831) MGI PMID:30082831 NCBI chrNW_004955408:30,950,816...30,953,571
Ensembl chrNW_004955408:30,950,816...30,953,571 		JBrowse link
G Il9r interleukin 9 receptor acts_upstream_of_or_within ISO (PMID:30082831) MGI PMID:30082831 NCBI chrNW_004955442:17,115,207...17,128,899
Ensembl chrNW_004955442:17,117,429...17,127,451 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (PMID:10933391) MGI PMID:10933391 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3795835|PMID:18438409) UniProt PMID:18438409 MGI:3795835 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chrNW_004955505:729...64,653 JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:25124037)
(PMID:23728777)		 MGI PMID:23728777 PMID:25124037 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Prkcd protein kinase C delta acts_upstream_of_or_within ISO (PMID:11976687) MGI PMID:11976687 NCBI chrNW_004955430:3,125,066...3,151,857
Ensembl chrNW_004955430:3,124,738...3,153,274 		JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of ISO (PMID:16027169) MGI PMID:16027169 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of		 ISO (MGI:61371|PMID:8334701)
(PMID:8566034), (PMID:9254656)
(PMID:8666928)		 UniProt
MGI		 PMID:8334701 PMID:8566034 PMID:8666928 PMID:9254656 MGI:61371 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:27776107) UniProt PMID:27776107 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
G Shb SH2 domain containing adaptor protein B acts_upstream_of_or_within ISO (PMID:11786382) MGI PMID:11786382 NCBI chrNW_004955419:28,423,354...28,555,948
Ensembl chrNW_004955419:28,421,354...28,558,823 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of ISO (PMID:12855817) MGI PMID:12855817 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of ISO (PMID:10549626) MGI PMID:10549626 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of ISO (PMID:15240667) MGI PMID:15240667 NCBI chrNW_004955413:27,341,977...27,344,009 JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of ISO (PMID:15240667) MGI PMID:15240667 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of ISO (PMID:16027169) MGI PMID:16027169 NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of ISO (PMID:10933391) MGI PMID:10933391 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541 		JBrowse link
B cell proliferation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:11120811)
(PMID:7671324)
(PMID:8806812)		 MGI PMID:7671324 PMID:8806812 PMID:11120811 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Cd180 CD180 molecule acts_upstream_of_or_within ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004955446:1,940,498...1,959,804
Ensembl chrNW_004955446:1,940,496...1,961,287 		JBrowse link
G Cd19 CD19 molecule involved_in ISO (PMID:16672701)
(PMID:1373518)		 UniProt PMID:1373518 PMID:16672701 NCBI chrNW_004955493:6,540,160...6,544,077 JBrowse link
G Gapt GRB2 binding adaptor protein, transmembrane acts_upstream_of_or_within ISO (PMID:18559951) MGI PMID:18559951 NCBI chrNW_004955446:9,631,970...9,639,215 JBrowse link
G Plcl2 phospholipase C like 2 acts_upstream_of_or_within ISO (PMID:14517301) MGI PMID:14517301 NCBI chrNW_004955430:9,157,074...9,347,366
Ensembl chrNW_004955430:9,157,074...9,348,563 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
B-1 B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd19 CD19 molecule involved_in ISO (MGI:74944|PMID:7543183) UniProt PMID:7543183 MGI:74944 NCBI chrNW_004955493:6,540,160...6,544,077 JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:14614861) MGI PMID:14614861 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slamf8 SLAM family member 8 involved_in ISO (MGI:6215454|PMID:11313408) UniProt PMID:11313408 MGI:6215454 NCBI chrNW_004955468:11,623,092...11,632,566
Ensembl chrNW_004955468:11,623,197...11,632,573 		JBrowse link
B-1a B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtm7 CKLF like MARVEL transmembrane domain containing 7 acts_upstream_of_or_within ISO (PMID:24080084) MGI PMID:24080084 NCBI chrNW_004955430:23,752,910...23,803,754
Ensembl chrNW_004955430:23,752,919...23,807,141 		JBrowse link
G Dpp4 dipeptidyl peptidase 4 ISO RGD PMID:19327106 RGD:41408336 NCBI chrNW_004955449:11,795,994...11,873,408
Ensembl chrNW_004955449:11,795,536...11,875,412 		JBrowse link
G Nfatc1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (PMID:14595020) MGI PMID:14595020 NCBI chrNW_004955402:62,558,392...62,674,347
Ensembl chrNW_004955402:62,558,286...62,674,457 		JBrowse link
G Plcl2 phospholipase C like 2 acts_upstream_of_or_within ISO (PMID:14517301) MGI PMID:14517301 NCBI chrNW_004955430:9,157,074...9,347,366
Ensembl chrNW_004955430:9,157,074...9,348,563 		JBrowse link
beta selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A involved_in ISO (MGI:5640904|PMID:25398325) CACAO PMID:25398325 MGI:5640904 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:9275205) MGI PMID:9275205 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:9275205) MGI PMID:9275205 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
CD4-positive or CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18228248) MGI PMID:18228248 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (PMID:16501569) MGI PMID:16501569 NCBI chrNW_004955433:8,788,867...8,845,925
Ensembl chrNW_004955433:8,788,655...8,845,925 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:17227833)
(MGI:3834308|PMID:17227833)		 BHF-UCL PMID:17227833 MGI:3834308 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
CD4-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkg7 natural killer cell granule protein 7 involved_in ISO (MGI:6506882|PMID:32839608) UniProt PMID:32839608 MGI:6506882 NCBI chrNW_004955558:1,027,682...1,029,338
Ensembl chrNW_004955558:1,028,425...1,029,161 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in ISO (MGI:3844206|PMID:19047684) UniProt PMID:19047684 MGI:3844206 NCBI chrNW_004955487:1,988,226...2,001,731
Ensembl chrNW_004955487:1,987,405...2,001,731 		JBrowse link
G Stoml2 stomatin like 2 involved_in ISO (MGI:5438519|PMID:23028053) UniProt PMID:23028053 MGI:5438519 NCBI chrNW_004955472:1,079,261...1,082,632
Ensembl chrNW_004955472:1,079,578...1,082,486 		JBrowse link
CD4-positive, alpha-beta T cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule involved_in ISO (PMID:22307619) UniProt PMID:22307619 NCBI chrNW_004955422:14,155,682...14,175,181
Ensembl chrNW_004955422:14,155,682...14,175,181 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4819294|PMID:20639485) BHF-UCL PMID:20639485 MGI:4819294 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO (PMID:28169274) MGI PMID:28169274 NCBI chrNW_004955493:8,295,868...8,302,638
Ensembl chrNW_004955493:8,295,868...8,304,520 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Cd83 CD83 molecule acts_upstream_of ISO (PMID:15322158) MGI PMID:15322158 NCBI chrNW_004955465:676,006...692,770
Ensembl chrNW_004955465:674,168...693,353 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:17028180) MGI PMID:17028180 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO (PMID:10926756) MGI PMID:10926756 NCBI chrNW_004955507:5,454,871...5,457,247
Ensembl chrNW_004955507:5,455,087...5,457,660 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO (PMID:16093716) MGI PMID:16093716 NCBI chrNW_004955415:29,413,253...29,420,682
Ensembl chrNW_004955415:29,413,253...29,420,682 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in ISO (MGI:3844206|PMID:19047684) UniProt PMID:19047684 MGI:3844206 NCBI chrNW_004955487:1,988,226...2,001,731
Ensembl chrNW_004955487:1,987,405...2,001,731 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941) MGI PMID:10716941 NCBI chrNW_004955430:10,587,539...10,683,887
Ensembl chrNW_004955430:10,587,539...10,683,887 		JBrowse link
CD4-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:3773459|PMID:18195075) UniProt PMID:18195075 MGI:3773459 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card11 caspase recruitment domain family member 11 acts_upstream_of ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cblb Cbl proto-oncogene B acts_upstream_of ISO (PMID:14973438) MGI PMID:14973438 NCBI chrNW_004955427:6,601,651...6,812,896
Ensembl chrNW_004955427:6,604,820...6,812,882 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of ISO (PMID:15314074)
(PMID:8125140)		 MGI PMID:8125140 PMID:15314074 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cd28 CD28 molecule acts_upstream_of ISO (PMID:14973438), (PMID:8125140), (PMID:9368605)
(PMID:9368605)		 MGI PMID:8125140 PMID:9368605 PMID:14973438 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of ISO (PMID:11894097), (PMID:14973438), (PMID:8125140) MGI PMID:8125140 PMID:11894097 PMID:14973438 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:17028180) MGI PMID:17028180 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Itch itchy E3 ubiquitin protein ligase acts_upstream_of ISO (PMID:14973438) MGI PMID:14973438 NCBI chrNW_004955422:26,810,829...26,918,517
Ensembl chrNW_004955422:26,809,972...26,887,123 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
G Prkcq protein kinase C theta acts_upstream_of ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of ISO (PMID:11894098)
(PMID:11894097)		 MGI PMID:11894097 PMID:11894098 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 acts_upstream_of ISO (PMID:15568026) MGI PMID:15568026 NCBI chrNW_004955486:8,670,182...8,684,677 JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in
acts_upstream_of		 ISO (PMID:22079196)
(PMID:16275384)
(PMID:16301745), (PMID:18573908)		 CACAO
MGI		 PMID:16275384 PMID:16301745 PMID:18573908 PMID:22079196 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Fut7 fucosyltransferase 7 acts_upstream_of_or_within ISO (PMID:18573908) MGI PMID:18573908 NCBI chrNW_004955513:5,056,718...5,061,974 JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842 		JBrowse link
G Pla2g2d phospholipase A2 group IID acts_upstream_of_or_within ISO (PMID:19564598) MGI PMID:19564598 NCBI chrNW_004955452:738,133...743,718
Ensembl chrNW_004955452:736,600...743,806 		JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:3773459|PMID:18195075) UniProt PMID:18195075 MGI:3773459 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
CD8-positive, alpha-beta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO (PMID:25348153) MGI PMID:25348153 NCBI chrNW_004955404:11,293,897...11,321,072
Ensembl chrNW_004955404:11,293,897...11,321,072 		JBrowse link
CD8-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdfy4 WDFY family member 4 acts_upstream_of_or_within_positive_effect ISO (PMID:30409884) MGI PMID:30409884 NCBI chrNW_004955556:1,178,970...1,421,139
Ensembl chrNW_004955556:1,177,117...1,421,228 		JBrowse link
CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf1 interferon regulatory factor 1 acts_upstream_of_or_within ISO (PMID:11359801) MGI PMID:11359801 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004955543:452,172...484,564
Ensembl chrNW_004955543:452,121...484,560 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO (PMID:16093716) MGI PMID:16093716 NCBI chrNW_004955415:29,413,253...29,420,682
Ensembl chrNW_004955415:29,413,253...29,420,682 		JBrowse link
G Psmb11 proteasome subunit beta 11 acts_upstream_of_or_within ISO (PMID:17540904)
(PMID:31915251)		 MGI PMID:17540904 PMID:31915251 NCBI chrNW_004955409:37,260,080...37,260,866 JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941), (PMID:15814699) MGI PMID:10716941 PMID:15814699 NCBI chrNW_004955430:10,587,539...10,683,887
Ensembl chrNW_004955430:10,587,539...10,683,887 		JBrowse link
G Tnfsf8 TNF superfamily member 8 acts_upstream_of_or_within ISO (PMID:16177108) MGI PMID:16177108 NCBI chrNW_004955419:12,763,343...12,790,044
Ensembl chrNW_004955419:12,762,748...12,788,117 		JBrowse link
CD8-positive, alpha-beta T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in ISO (PMID:17566017)
(MGI:4399030|PMID:14605368)		 UniProt PMID:14605368 PMID:17566017 MGI:4399030 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:17277142) MGI PMID:17277142 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8170972) MGI PMID:8170972 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:2159528|PMID:11850626), (MGI:3045816|PMID:15078895) UniProt PMID:11850626 PMID:15078895 MGI:2159528 MGI:3045816 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 C-C motif chemokine receptor 9 acts_upstream_of_or_within ISO (PMID:25348153) MGI PMID:25348153 NCBI chrNW_004955420:26,083,445...26,093,740
Ensembl chrNW_004955420:26,083,040...26,093,775 		JBrowse link
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO (PMID:25348153) MGI PMID:25348153 NCBI chrNW_004955404:11,293,897...11,321,072
Ensembl chrNW_004955404:11,293,897...11,321,072 		JBrowse link
cytotoxic T cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:11266473) MGI PMID:11266473 NCBI chrNW_004955409:588,725...621,874
Ensembl chrNW_004955409:588,254...621,874 		JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:23042080), (PMID:23190531) MGI PMID:23042080 PMID:23190531 NCBI chrNW_004955436:16,303,169...16,327,854
Ensembl chrNW_004955436:16,303,189...16,327,854 		JBrowse link
cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd8a CD8 subunit alpha acts_upstream_of_or_within ISO (PMID:1673361) MGI PMID:1673361 NCBI chrNW_004955424:952,595...979,159
Ensembl chrNW_004955424:952,502...978,636 		JBrowse link
DN2 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO (MGI:5784970|PMID:24638065) UniProt PMID:24638065 MGI:5784970 NCBI chrNW_004955439:14,921,524...14,949,493
Ensembl chrNW_004955439:14,920,601...14,924,191 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (PMID:10911993), (PMID:9823897) MGI PMID:9823897 PMID:10911993 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264 		JBrowse link
DN3 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO (MGI:5784970|PMID:24638065) UniProt PMID:24638065 MGI:5784970 NCBI chrNW_004955439:14,921,524...14,949,493
Ensembl chrNW_004955439:14,920,601...14,924,191 		JBrowse link
DN4 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955406:18,435,984...18,527,967
Ensembl chrNW_004955406:18,437,672...18,527,698 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 involved_in ISO (MGI:3820023|PMID:17579027) UniProt PMID:17579027 MGI:3820023 NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680 		JBrowse link
establishment of T cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:12729902) BHF-UCL PMID:12729902 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490 		JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:12729902) BHF-UCL PMID:12729902 NCBI chrNW_004955472:1,427,660...1,428,771
Ensembl chrNW_004955472:1,427,710...1,429,102 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (MGI:3834299|PMID:18329370) UniProt PMID:18329370 MGI:3834299 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G LOC102023166 cytochrome P450 26B1 acts_upstream_of_or_within ISO (PMID:23991089) MGI PMID:23991089 NCBI chrNW_004955424:13,336,189...13,355,368
Ensembl chrNW_004955424:13,336,189...13,355,423 		JBrowse link
G Myh9 myosin heavy chain 9 acts_upstream_of_or_within ISO (PMID:15064761) MGI PMID:15064761 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:3834299|PMID:18329370) UniProt PMID:18329370 MGI:3834299 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:21856933) MGI PMID:21856933 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
extrathymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:10704459) MGI PMID:10704459 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf8 interferon regulatory factor 8 involved_in ISO (MGI:6303891|PMID:31000603) ARUK-UCL PMID:31000603 MGI:6303891 NCBI chrNW_004955541:973,004...988,493
Ensembl chrNW_004955541:973,022...990,106 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chrNW_004955505:729...64,653 JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (PMID:12928432) MGI PMID:12928432 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6303891|PMID:31000603) ARUK-UCL PMID:31000603 MGI:6303891 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
gamma-delta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxadr CXADR Ig-like cell adhesion molecule involved_in ISO (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chrNW_004955407:18,894,853...18,927,129
Ensembl chrNW_004955407:18,867,797...18,907,331 		JBrowse link
G Itk IL2 inducible T cell kinase involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chrNW_004955408:11,387,595...11,447,896
Ensembl chrNW_004955408:11,387,589...11,448,199 		JBrowse link
G Jaml junction adhesion molecule like involved_in ISO (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chrNW_004955412:19,363,501...19,402,213 JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (MGI:1342169|PMID:10383933) UniProt PMID:10383933 MGI:1342169 NCBI chrNW_004955538:3,421,685...3,433,829
Ensembl chrNW_004955538:3,421,685...3,433,842 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of ISO (PMID:7807014) MGI PMID:7807014 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of ISO (PMID:7807014) MGI PMID:7807014 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Sox13 SRY-box transcription factor 13 involved_in ISO (MGI:3695974|PMID:17218525), (MGI:6276541|PMID:30413363) UniProt PMID:17218525 PMID:30413363 MGI:3695974 MGI:6276541 NCBI chrNW_004955406:39,959,458...39,994,214
Ensembl chrNW_004955406:39,966,055...39,994,214 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of ISO (PMID:7477352)
(PMID:8790395)		 MGI PMID:7477352 PMID:8790395 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Tcf7 transcription factor 7 involved_in ISO (MGI:6276541|PMID:30413363) UniProt PMID:30413363 MGI:6276541 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527 		JBrowse link
gamma-delta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase acts_upstream_of ISO (MGI:7437433|PMID:35939687) UniProt PMID:35939687 MGI:7437433 NCBI chrNW_004955478:11,104,445...11,128,980
Ensembl chrNW_004955478:11,105,920...11,128,222 		JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:14607964) MGI PMID:14607964 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (MGI:3531365|PMID:15688343) UniProt PMID:15688343 MGI:3531365 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128 		JBrowse link
G Il21 interleukin 21 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Il6 interleukin 6 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO (MGI:6303891|PMID:31000603) ARUK-UCL PMID:31000603 MGI:6303891 NCBI chrNW_004955541:973,004...988,493
Ensembl chrNW_004955541:973,022...990,106 		JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 acts_upstream_of_or_within ISO (PMID:23997217) MGI PMID:23997217 NCBI chrNW_004955429:18,356,642...18,372,928
Ensembl chrNW_004955429:18,356,642...18,372,928 		JBrowse link
G Phf14 PHD finger protein 14 involved_in ISO (MGI:6514486|PMID:33035772) UniProt PMID:33035772 MGI:6514486 NCBI chrNW_004955432:17,535,222...17,807,106
Ensembl chrNW_004955432:17,535,224...17,697,936 		JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955412:13,131,229...13,167,150
Ensembl chrNW_004955412:13,131,168...13,156,128 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6303891|PMID:31000603) ARUK-UCL PMID:31000603 MGI:6303891 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
immature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fnip1 folliculin interacting protein 1 acts_upstream_of_or_within ISO (PMID:22608497) MGI PMID:22608497 NCBI chrNW_004955408:3,117,258...3,238,223
Ensembl chrNW_004955408:3,117,277...3,238,223 		JBrowse link
G Irf2bp2 interferon regulatory factor 2 binding protein 2 involved_in ISO (PMID:27016798) UniProt PMID:27016798 NCBI chrNW_004955492:4,889,878...4,895,508
Ensembl chrNW_004955492:4,889,878...4,894,325 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase involved_in ISO (MGI:3040777|PMID:15067126) UniProt PMID:15067126 MGI:3040777 NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:5926569|PMID:28062693) ARUK-UCL PMID:28062693 MGI:5926569 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
G Spib Spi-B transcription factor involved_in ISO (MGI:5926569|PMID:28062693) ARUK-UCL PMID:28062693 MGI:5926569 NCBI chrNW_004955559:705,809...711,407
Ensembl chrNW_004955559:705,809...711,407 		JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (MGI:6220623|PMID:29907570) UniProt PMID:29907570 MGI:6220623 NCBI chrNW_004955422:20,067,933...20,074,947
Ensembl chrNW_004955422:20,068,848...20,073,850 		JBrowse link
immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of ISO (PMID:23487419) MGI PMID:23487419 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of ISO (PMID:16230479) MGI PMID:16230479 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:16230479) MGI PMID:16230479 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Ifnar2 interferon alpha and beta receptor subunit 2 acts_upstream_of_or_within ISO (PMID:11154225) MGI PMID:11154225 NCBI chrNW_004955407:32,601,862...32,637,852
Ensembl chrNW_004955407:32,601,826...32,638,564 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO (PMID:18617424) MGI PMID:18617424 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989 		JBrowse link
immunological synapse formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490 		JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955472:1,427,660...1,428,771
Ensembl chrNW_004955472:1,427,710...1,429,102 		JBrowse link
G Cd2ap CD2 associated protein acts_upstream_of_or_within ISO (PMID:14512504) MGI PMID:14512504 NCBI chrNW_004955437:12,005,399...12,087,014
Ensembl chrNW_004955437:11,983,311...12,091,100 		JBrowse link
G Cd6 CD6 molecule involved_in ISO (PMID:15294938) UniProt PMID:15294938 NCBI chrNW_004955511:5,592,176...5,617,421 JBrowse link
G Cd81 CD81 molecule involved_in ISO (PMID:23858057) UniProt PMID:23858057 NCBI chrNW_004955422:14,155,682...14,175,181
Ensembl chrNW_004955422:14,155,682...14,175,181 		JBrowse link
G Coro1a coronin 1A NOT|involved_in ISO (PMID:24760828) UniProt PMID:24760828 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO (PMID:15699074) MGI PMID:15699074 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Dock8 dedicator of cytokinesis 8 acts_upstream_of_or_within ISO (PMID:22006977) MGI PMID:22006977 NCBI chrNW_004955434:4,849,147...5,050,545
Ensembl chrNW_004955434:4,867,016...5,049,118 		JBrowse link
G Ephb1 EPH receptor B1 acts_upstream_of_or_within ISO PMID:17310244 MGI PMID:17310244 RGD:10047256 NCBI chrNW_004955501:3,424,112...3,821,727
Ensembl chrNW_004955501:3,423,977...3,821,890 		JBrowse link
G Git1 GIT ArfGAP 1 acts_upstream_of_or_within ISO PMID:17310244 MGI PMID:17310244 RGD:10047256 NCBI chrNW_004955481:3,671,728...3,681,279
Ensembl chrNW_004955481:3,670,111...3,685,051 		JBrowse link
G Msn moesin involved_in ISO (PMID:27405666) UniProt PMID:27405666 NCBI chrNW_004955475:5,301,856...5,370,378
Ensembl chrNW_004955475:5,301,910...5,370,691 		JBrowse link
G Nck2 NCK adaptor protein 2 acts_upstream_of_or_within ISO PMID:17310244 MGI PMID:17310244 RGD:10047256 NCBI chrNW_004955470:10,487,962...10,593,046
Ensembl chrNW_004955470:10,487,481...10,593,046 		JBrowse link
G Prf1 perforin 1 involved_in ISO (PMID:21438968) UniProt PMID:21438968 NCBI chrNW_004955437:20,700,912...20,705,076
Ensembl chrNW_004955437:20,700,718...20,706,929 		JBrowse link
isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 acts_upstream_of ISO (PMID:25404367) MGI PMID:25404367 NCBI chrNW_004955481:6,986,128...7,031,113
Ensembl chrNW_004955481:6,986,502...7,030,742 		JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in ISO (MGI:4456325|PMID:20421391), (MGI:5004732|PMID:21572431) UniProt PMID:20421391 PMID:21572431 MGI:4456325 MGI:5004732 NCBI chrNW_004955523:42,365...66,103
Ensembl chrNW_004955523:42,218...66,103 		JBrowse link
G Cd40lg CD40 ligand involved_in ISO (MGI:3687427|PMID:7529792) UniProt PMID:7529792 MGI:3687427 NCBI chrNW_004955489:8,465,571...8,477,714
Ensembl chrNW_004955489:8,465,164...8,477,746 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:15280420) MGI PMID:15280420 NCBI chrNW_004955555:2,393,510...2,430,180
Ensembl chrNW_004955555:2,393,278...2,406,582 		JBrowse link
G Exo1 exonuclease 1 acts_upstream_of_or_within ISO (PMID:14716311) MGI PMID:14716311 NCBI chrNW_004955406:10,248,981...10,276,207
Ensembl chrNW_004955406:10,245,886...10,275,522 		JBrowse link
G Exosc3 exosome component 3 involved_in ISO (MGI:5009766|PMID:21255825) UniProt PMID:21255825 MGI:5009766 NCBI chrNW_004955419:28,683,896...28,692,006
Ensembl chrNW_004955419:28,683,896...28,693,395 		JBrowse link
G Exosc6 exosome component 6 involved_in ISO (MGI:5009766|PMID:21255825) UniProt PMID:21255825 MGI:5009766 NCBI chrNW_004955484:3,088,133...3,089,551
Ensembl chrNW_004955484:3,088,624...3,089,472 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (PMID:17713479) MGI PMID:17713479 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO (PMID:12743174) MGI PMID:12743174 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO (PMID:10430621)
(PMID:12743174)		 MGI PMID:10430621 PMID:12743174 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within ISO (PMID:17015724)
(PMID:16618598)		 MGI PMID:16618598 PMID:17015724 NCBI chrNW_004955441:14,451,207...14,471,316
Ensembl chrNW_004955441:14,451,307...14,471,227 		JBrowse link
G Nbn nibrin involved_in ISO (MGI:3529405|PMID:15668383) UniProt PMID:15668383 MGI:3529405 NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:25124037)
(PMID:31182790)		 MGI PMID:25124037 PMID:31182790 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (MGI:4420833|PMID:20080757) UniProt PMID:20080757 MGI:4420833 NCBI chrNW_004955420:12,656,815...12,676,836
Ensembl chrNW_004955420:12,657,272...12,676,426 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (MGI:4420833|PMID:20080757) UniProt PMID:20080757 MGI:4420833 NCBI chrNW_004955437:5,807,592...5,832,213
Ensembl chrNW_004955437:5,809,082...5,832,057 		JBrowse link
G Sanbr SANT and BTB domain regulator of CSR involved_in ISO (MGI:6707280|PMID:33831416) UniProt PMID:33831416 MGI:6707280 NCBI chrNW_004955424:22,728,802...22,785,374
Ensembl chrNW_004955424:22,728,802...22,785,374 		JBrowse link
G Swap70 switching B cell complex subunit SWAP70 acts_upstream_of_or_within ISO (PMID:9642267) MGI PMID:9642267 NCBI chrNW_004955414:25,385,648...25,444,743
Ensembl chrNW_004955414:25,385,007...25,444,913 		JBrowse link
G Ung uracil DNA glycosylase acts_upstream_of_or_within ISO (PMID:17015724) MGI PMID:17015724 NCBI chrNW_004955455:10,266,989...10,282,196
Ensembl chrNW_004955455:10,266,989...10,282,196 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:17713479) MGI PMID:17713479 NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264 		JBrowse link
isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO (MGI:5787846|PMID:27174992) UniProt PMID:27174992 MGI:5787846 NCBI chrNW_004955439:14,921,524...14,949,493
Ensembl chrNW_004955439:14,920,601...14,924,191 		JBrowse link
isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of ISO (PMID:10490661) MGI PMID:10490661 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:16275384) MGI PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of ISO (PMID:10490661) MGI PMID:10490661 NCBI chrNW_004955458:4,833,417...4,847,956
Ensembl chrNW_004955458:4,833,515...4,843,273 		JBrowse link
isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:14988498) MGI PMID:14988498 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
lymphocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:23453632) MGI PMID:23453632 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
lymphocyte costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 ISO RGD PMID:22417871 RGD:11252086 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta acts_upstream_of_or_within ISO (PMID:12434155) MGI PMID:12434155 NCBI chrNW_004955484:9,503,286...9,557,066
Ensembl chrNW_004955484:9,503,227...9,557,066 		JBrowse link
G Fbxo7 F-box protein 7 acts_upstream_of ISO (PMID:21652635) MGI PMID:21652635 NCBI chrNW_004955405:41,429,421...41,449,670
Ensembl chrNW_004955405:41,433,082...41,453,909 		JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:12387740) MGI PMID:12387740 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:12387740) MGI PMID:12387740 NCBI chrNW_004955559:1,364,056...1,371,245
Ensembl chrNW_004955559:1,365,938...1,370,002 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 involved_in ISO (PMID:17934067) UniProt PMID:17934067 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:23918385) MGI PMID:23918385 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Ly6d lymphocyte antigen 6 family member D involved_in ISO (MGI:4410397|PMID:19833765) UniProt PMID:19833765 MGI:4410397 NCBI chrNW_004955454:1,473,405...1,474,950
Ensembl chrNW_004955454:1,473,191...1,475,038 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8133891) MGI PMID:8133891 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO (PMID:26385063) UniProt PMID:26385063 NCBI chrNW_004955555:2,060,533...2,086,229
Ensembl chrNW_004955555:2,060,533...2,086,229 		JBrowse link
G Spi1 Spi-1 proto-oncogene acts_upstream_of_or_within ISO (PMID:11980719) MGI PMID:11980719 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) MGI PMID:18958875 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tox thymocyte selection associated high mobility group box acts_upstream_of_or_within ISO (PMID:20818394) MGI PMID:20818394 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
lymphocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 fms related receptor tyrosine kinase 3 involved_in ISO (MGI:3795633|PMID:18469816) UniProt PMID:18469816 MGI:3795633 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:16227984)
(PMID:16275384)		 MGI PMID:16227984 PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Hells helicase, lymphoid specific involved_in ISO (MGI:1855809|PMID:10781083) UniProt PMID:10781083 MGI:1855809 NCBI chrNW_004955507:995,389...1,034,852
Ensembl chrNW_004955507:990,429...1,034,852 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:12944494) MGI PMID:12944494 NCBI chrNW_004955473:462,940...510,006 JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 acts_upstream_of_or_within ISO (PMID:12944494) MGI PMID:12944494 NCBI chrNW_004955479:9,388,241...9,406,717
Ensembl chrNW_004955479:9,388,108...9,406,764 		JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 acts_upstream_of_or_within ISO (PMID:12944494) MGI PMID:12944494 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978 		JBrowse link
G Pura purine rich element binding protein A acts_upstream_of_or_within ISO (PMID:12972605) MGI PMID:12972605 NCBI chrNW_004955418:538,883...548,605 JBrowse link
G Rassf5 Ras association domain family member 5 acts_upstream_of ISO (PMID:21194982) MGI PMID:21194982 NCBI chrNW_004955406:42,086,081...42,159,204
Ensembl chrNW_004955406:42,086,081...42,159,204 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of ISO (PMID:10607756) MGI PMID:10607756 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:9009202) MGI PMID:9009202 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (MGI:3531365|PMID:15688343) UniProt PMID:15688343 MGI:3531365 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:3044313|PMID:15146182), (MGI:3838059|PMID:19217325) UniProt PMID:15146182 PMID:19217325 MGI:3044313 MGI:3838059 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604 		JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (MGI:5818419|PMID:25729399) UniProt PMID:25729399 MGI:5818419 NCBI chrNW_004955453:9,229,535...9,424,570
Ensembl chrNW_004955453:9,264,666...9,424,570 		JBrowse link
G Dock11 dedicator of cytokinesis 11 involved_in ISO (MGI:5818419|PMID:25729399) UniProt PMID:25729399 MGI:5818419 NCBI chrNW_004955534:1,239,241...1,431,714
Ensembl chrNW_004955534:1,239,247...1,431,714 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (MGI:3838059|PMID:19217325) UniProt PMID:19217325 MGI:3838059 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512 		JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (MGI:3838059|PMID:19217325) UniProt PMID:19217325 MGI:3838059 NCBI chrNW_004955413:23,901,987...23,917,720
Ensembl chrNW_004955413:23,902,707...23,917,542 		JBrowse link
G Notch2 notch receptor 2 involved_in ISO (MGI:3838059|PMID:19217325) UniProt PMID:19217325 MGI:3838059 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (MGI:1860716|PMID:10881171) UniProt PMID:10881171 MGI:1860716 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225 		JBrowse link
mature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:23918385) MGI PMID:23918385 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Pou2f2 POU class 2 homeobox 2 acts_upstream_of_or_within ISO (PMID:8096198) MGI PMID:8096198 NCBI chrNW_004955555:759,308...793,500
Ensembl chrNW_004955555:759,308...793,485 		JBrowse link
mature B cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH17orf99 chromosome unknown C17orf99 homolog involved_in ISO (MGI:6103709|PMID:28978694) UniProt PMID:28978694 MGI:6103709 NCBI chrNW_004955506:4,397,221...4,408,645 JBrowse link
G Gpr183 G protein-coupled receptor 183 involved_in ISO (MGI:4352759|PMID:19597478) UniProt PMID:19597478 MGI:4352759 NCBI chrNW_004955404:11,264,954...11,277,531
Ensembl chrNW_004955404:11,264,954...11,277,531 		JBrowse link
G Rag2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
memory B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (MGI:2387354|PMID:10755614) UniProt PMID:10755614 MGI:2387354 NCBI chrNW_004955461:7,960,901...8,036,221
Ensembl chrNW_004955461:7,960,690...7,976,183 		JBrowse link
memory T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:16542376) MGI PMID:16542376 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO (PMID:25271321) MGI PMID:25271321 NCBI chrNW_004955513:2,197,037...2,244,992
Ensembl chrNW_004955513:2,197,037...2,244,992 		JBrowse link
memory T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dock8 dedicator of cytokinesis 8 acts_upstream_of_or_within ISO (PMID:22006977) MGI PMID:22006977 NCBI chrNW_004955434:4,849,147...5,050,545
Ensembl chrNW_004955434:4,867,016...5,049,118 		JBrowse link
natural killer cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:18852879) UniProt PMID:18852879 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003 		JBrowse link
G Cd2 CD2 molecule involved_in ISO (PMID:23006327) UniProt PMID:23006327 NCBI chrNW_004955435:19,861,658...19,876,383
Ensembl chrNW_004955435:19,861,527...19,873,581 		JBrowse link
G Ifne interferon epsilon involved_in ISO (PMID:23964570) CACAO PMID:23964570 NCBI chrNW_004955472:12,795,352...12,801,035 JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:1673147) UniProt PMID:1673147 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il18 interleukin 18 acts_upstream_of_or_within ISO (PMID:10227969) MGI PMID:10227969 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634 		JBrowse link
G Il18r1 interleukin 18 receptor 1 acts_upstream_of_or_within ISO (PMID:10227969) MGI PMID:10227969 NCBI chrNW_004955470:7,854,995...7,887,810
Ensembl chrNW_004955470:7,854,988...7,887,883 		JBrowse link
G Ncr3 natural cytotoxicity triggering receptor 3 involved_in ISO (PMID:18852879) UniProt PMID:18852879 NCBI chrNW_004955437:130,360...134,751 JBrowse link
G Prdx1 peroxiredoxin 1 involved_in ISO (PMID:8462106) UniProt PMID:8462106 NCBI chrNW_004955464:12,761,390...12,773,413
Ensembl chrNW_004955464:12,761,401...12,773,146 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:27776107) UniProt PMID:27776107 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
natural killer cell activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd244 CD244 molecule involved_in ISO (PMID:11714776)
(MGI:3773416|PMID:15905190)		 UniProt PMID:11714776 PMID:15905190 MGI:3773416 NCBI chrNW_004955468:12,532,937...12,559,859
Ensembl chrNW_004955468:12,534,064...12,559,434 		JBrowse link
G Il12b interleukin 12B ISO RGD PMID:14960310 RGD:1600048 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
natural killer cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coro1a coronin 1A involved_in ISO (PMID:24760828) UniProt PMID:24760828 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Nkg7 natural killer cell granule protein 7 involved_in ISO (MGI:6506882|PMID:32839608), (MGI:6810811|PMID:33911019) UniProt PMID:32839608 PMID:33911019 MGI:6506882 MGI:6810811 NCBI chrNW_004955558:1,027,682...1,029,338
Ensembl chrNW_004955558:1,028,425...1,029,161 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:11266473) MGI PMID:11266473 NCBI chrNW_004955409:588,725...621,874
Ensembl chrNW_004955409:588,254...621,874 		JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:23042080), (PMID:23190531) MGI PMID:23042080 PMID:23190531 NCBI chrNW_004955436:16,303,169...16,327,854
Ensembl chrNW_004955436:16,303,189...16,327,854 		JBrowse link
G Unc13d unc-13 homolog D acts_upstream_of_or_within ISO (PMID:17420270) MGI PMID:17420270 NCBI chrNW_004955506:6,407,073...6,423,406
Ensembl chrNW_004955506:6,407,723...6,423,406 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 NOT|involved_in ISO (PMID:18042464) UniProt PMID:18042464 NCBI chrNW_004955467:8,793,296...8,796,771
Ensembl chrNW_004955467:8,793,296...8,796,771 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 involved_in ISO (PMID:18042464) UniProt PMID:18042464 NCBI chrNW_004955594:20,496...72,648
Ensembl chrNW_004955594:18,727...72,654 		JBrowse link
natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:16751775) MGI PMID:16751775 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955559:1,364,056...1,371,245
Ensembl chrNW_004955559:1,365,938...1,370,002 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:24855001) MGI PMID:24855001 NCBI chrNW_004955409:29,373,572...29,470,623
Ensembl chrNW_004955409:29,373,572...29,470,623 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791 		JBrowse link
G Il11ra interleukin 11 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:15499555) MGI PMID:15499555 NCBI chrNW_004955472:1,474,802...1,485,352
Ensembl chrNW_004955472:1,475,178...1,482,206 		JBrowse link
G Il15 interleukin 15 acts_upstream_of ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Il15ra interleukin 15 receptor subunit alpha acts_upstream_of ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955421:22,590,168...22,612,835
Ensembl chrNW_004955421:22,586,012...22,620,788 		JBrowse link
G Il21 interleukin 21 acts_upstream_of ISO (PMID:14764669) MGI PMID:14764669 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (MGI:6393224|PMID:27733580) UniProt PMID:27733580 MGI:6393224 NCBI chrNW_004955451:11,770,201...11,802,992
Ensembl chrNW_004955451:11,770,201...11,802,992 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within ISO (PMID:16751775) MGI PMID:16751775 NCBI chrNW_004955470:2,065,468...2,167,909
Ensembl chrNW_004955470:2,065,411...2,167,909 		JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in ISO (MGI:6460593|PMID:32190943) UniProt PMID:32190943 MGI:6460593 NCBI chrNW_004955515:908,313...910,159
Ensembl chrNW_004955515:908,477...909,868 		JBrowse link
G Pbx1 PBX homeobox 1 involved_in ISO (MGI:6460593|PMID:32190943) UniProt PMID:32190943 MGI:6460593 NCBI chrNW_004955462:11,777,168...12,083,068
Ensembl chrNW_004955462:11,812,649...12,082,316 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in ISO (MGI:3521537|PMID:15557316) ARUK-UCL PMID:15557316 MGI:3521537 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Rabl3 RAB, member of RAS oncogene family like 3 involved_in ISO (MGI:6405642|PMID:32220963) UniProt PMID:32220963 MGI:6405642 NCBI chrNW_004955427:20,204,901...20,242,242
Ensembl chrNW_004955427:20,204,901...20,242,242 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (MGI:3763993|PMID:18031695) UniProt PMID:18031695 MGI:3763993 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (MGI:3763993|PMID:18031695) UniProt PMID:18031695 MGI:3763993 NCBI chrNW_004955468:12,233,629...12,264,502 JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chrNW_004955449:1,347,781...1,404,368 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:9841920)
(PMID:10072077)		 MGI PMID:9841920 PMID:10072077 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:9841920)
(PMID:10072077)		 MGI PMID:9841920 PMID:10072077 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (PMID:21126536) UniProt PMID:21126536 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO (PMID:17318811) MGI PMID:17318811 NCBI chrNW_004955532:2,128,430...2,131,235
Ensembl chrNW_004955532:2,128,430...2,131,235 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within ISO (PMID:16751775) MGI PMID:16751775 NCBI chrNW_004955416:8,361,722...8,377,629
Ensembl chrNW_004955416:8,359,207...8,377,692 		JBrowse link
G Znf683 zinc finger protein 683 acts_upstream_of_or_within ISO (PMID:22885984) MGI PMID:22885984 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
natural killer cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf4 E74 like ETS transcription factor 4 involved_in ISO (MGI:2388503|PMID:12387738) UniProt PMID:12387738 MGI:2388503 NCBI chrNW_004955473:4,934,770...4,986,283
Ensembl chrNW_004955473:4,942,385...4,986,433 		JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISO (MGI:5908305|PMID:28295343) UniProt PMID:28295343 MGI:5908305 NCBI chrNW_004955442:7,826,967...7,862,035
Ensembl chrNW_004955442:7,826,738...7,860,028 		JBrowse link
G Il15 interleukin 15 acts_upstream_of ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (MGI:3763993|PMID:18031695) UniProt PMID:18031695 MGI:3763993 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (MGI:3763993|PMID:18031695) UniProt PMID:18031695 MGI:3763993 NCBI chrNW_004955468:12,233,629...12,264,502 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO (PMID:9841920) MGI PMID:9841920 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
negative regulation of activated T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (MGI:5908339|PMID:19360123) UniProt PMID:19360123 MGI:5908339 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972 		JBrowse link
G Btn1a1 butyrophilin subfamily 1 member A1 involved_in ISO (MGI:4453380|PMID:20208008) UniProt PMID:20208008 MGI:4453380 NCBI chrNW_004955483:392,749...409,947 JBrowse link
G Casp3 caspase 3 acts_upstream_of_or_within ISO (PMID:12970760) MGI PMID:12970760 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Cd274 CD274 molecule involved_in ISO (PMID:12538684)
(PMID:17489864)		 UniProt
AgBase		 PMID:12538684 PMID:17489864 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (MGI:3834299|PMID:18329370) UniProt PMID:18329370 MGI:3834299 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (PMID:18077788) MGI PMID:18077788 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870) ARUK-UCL PMID:18619870 MGI:3803048 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Lrrc32 leucine rich repeat containing 32 acts_upstream_of_or_within ISO (PMID:18628982) MGI PMID:18628982 NCBI chrNW_004955414:15,296,704...15,309,088
Ensembl chrNW_004955414:15,296,563...15,309,088 		JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in ISO (PMID:12538684) UniProt PMID:12538684 NCBI chrNW_004955434:9,540,047...9,559,335 JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha involved_in ISO (PMID:17911601) UniProt PMID:17911601 NCBI chrNW_004955478:4,241,283...4,262,119
Ensembl chrNW_004955478:4,241,283...4,263,087 		JBrowse link
G Prnp prion protein (Kanno blood group) involved_in ISO (MGI:4943618|PMID:20145049) BHF-UCL PMID:20145049 MGI:4943618 NCBI chrNW_004955415:15,442,313...15,454,644
Ensembl chrNW_004955415:15,442,313...15,454,644 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5284769|PMID:18172933) BHF-UCL PMID:18172933 MGI:5284769 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:3834299|PMID:18329370) UniProt PMID:18329370 MGI:3834299 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098 		JBrowse link
negative regulation of alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor acts_upstream_of_or_within ISO (PMID:10069416) MGI PMID:10069416 NCBI chrNW_004955455:7,886,720...7,906,214
Ensembl chrNW_004955455:7,895,974...7,906,505 		JBrowse link
negative regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 involved_in ISO (MGI:4355451|PMID:19667090) BHF-UCL PMID:19667090 MGI:4355451 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:3836494|PMID:19109233) BHF-UCL PMID:19109233 MGI:3836494 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10981962) MGI PMID:10981962 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
negative regulation of alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btla B and T lymphocyte associated acts_upstream_of_or_within ISO (PMID:15568026) MGI PMID:15568026 NCBI chrNW_004955427:12,804,467...12,837,178
Ensembl chrNW_004955427:12,802,581...12,837,031 		JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of_or_within ISO (PMID:23487419) MGI PMID:23487419 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16945588) MGI PMID:16945588 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
negative regulation of B cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bank1 B cell scaffold protein with ankyrin repeats 1 acts_upstream_of_or_within ISO (PMID:16546095) MGI PMID:16546095 NCBI chrNW_004955496:6,267,618...6,511,195
Ensembl chrNW_004955496:6,267,551...6,470,948 		JBrowse link
G Btk Bruton tyrosine kinase ISO RGD PMID:25545336 RGD:151665128 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:6610701) MGI PMID:6610701 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (MGI:3589323|PMID:16002694) BHF-UCL PMID:16002694 MGI:3589323 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within ISO (PMID:10704460) MGI PMID:10704460 NCBI chrNW_004955453:2,938,659...3,037,211
Ensembl chrNW_004955453:2,938,659...3,037,211 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:4460047|PMID:20519653) ARUK-UCL PMID:20519653 MGI:4460047 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
G Samsn1 SAM domain, SH3 domain and nuclear localization signals 1 involved_in ISO (MGI:4437539|PMID:19923443) UniProt PMID:19923443 MGI:4437539 NCBI chrNW_004955407:16,329,838...16,377,763
Ensembl chrNW_004955407:16,329,288...16,378,062 		JBrowse link
G Tbc1d10c TBC1 domain family member 10C acts_upstream_of_or_within ISO (PMID:23109291) MGI PMID:23109291 NCBI chrNW_004955422:18,069,686...18,075,795
Ensembl chrNW_004955422:18,069,686...18,075,794 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (MGI:4946158|PMID:21088135) BHF-UCL PMID:21088135 MGI:4946158 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
negative regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:16618805) MGI PMID:16618805 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Hmgb3 high mobility group box 3 acts_upstream_of_or_within ISO (PMID:12714519) MGI PMID:12714519 NCBI chrNW_004955498:6,633,540...6,640,393
Ensembl chrNW_004955498:6,633,336...6,640,459 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:18523151) MGI PMID:18523151 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in ISO (PMID:18941195)
(MGI:3814493|PMID:18941195)		 UniProt PMID:18941195 MGI:3814493 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514 		JBrowse link
negative regulation of B cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:17875758) UniProt PMID:17875758 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545 		JBrowse link
G Btk Bruton tyrosine kinase acts_upstream_of_or_within ISO (PMID:7680896) MGI PMID:7680896 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120 		JBrowse link
G Btla B and T lymphocyte associated acts_upstream_of_or_within ISO (PMID:12796776) MGI PMID:12796776 NCBI chrNW_004955427:12,804,467...12,837,178
Ensembl chrNW_004955427:12,802,581...12,837,031 		JBrowse link
G Casp3 caspase 3 acts_upstream_of_or_within ISO (PMID:12970760) MGI PMID:12970760 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:8920854) MGI PMID:8920854 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cd300a CD300a molecule involved_in ISO (PMID:21482706) UniProt PMID:21482706 NCBI chrNW_004955553:1,335,854...1,356,001
Ensembl chrNW_004955553:1,336,227...1,460,376 		JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 involved_in ISO (PMID:17875758) UniProt PMID:17875758 NCBI chrNW_004955457:11,028,707...11,034,898
Ensembl chrNW_004955457:11,028,698...11,073,460 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:12385742), (PMID:8552190) MGI PMID:8552190 PMID:12385742 NCBI chrNW_004955462:14,639,396...14,653,801 JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within ISO (PMID:9184696) MGI PMID:9184696 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within ISO (PMID:10704460) MGI PMID:10704460 NCBI chrNW_004955453:2,938,659...3,037,211
Ensembl chrNW_004955453:2,938,659...3,037,211 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:894972|PMID:9252121) UniProt PMID:9252121 MGI:894972 NCBI chrNW_004955454:15,025,967...15,111,142
Ensembl chrNW_004955454:15,035,979...15,111,142 		JBrowse link
G Pawr pro-apoptotic WT1 regulator acts_upstream_of_or_within ISO (PMID:12970181) MGI PMID:12970181 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710 		JBrowse link
G Pkn1 protein kinase N1 acts_upstream_of_or_within ISO (PMID:23223530) MGI PMID:23223530 NCBI chrNW_004955415:33,040,868...33,062,753
Ensembl chrNW_004955415:33,043,918...33,063,567 		JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:16027169) MGI PMID:16027169 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5284769|PMID:18172933) BHF-UCL PMID:18172933 MGI:5284769 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Tnfrsf13b TNF receptor superfamily member 13B acts_upstream_of_or_within ISO (PMID:15240667) MGI PMID:15240667 NCBI chrNW_004955577:930,612...971,698 JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 involved_in ISO (MGI:3628730|PMID:12515813) UniProt PMID:12515813 MGI:3628730 NCBI chrNW_004955437:11,877,051...11,915,220
Ensembl chrNW_004955437:11,876,895...11,915,460 		JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO (PMID:16027169) MGI PMID:16027169 NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:21727189)
(MGI:5295549|PMID:21727189)		 UniProt PMID:21727189 MGI:5295549 NCBI chrNW_004955468:2,673,657...2,677,633
Ensembl chrNW_004955468:2,673,980...2,677,321 		JBrowse link
negative regulation of CD4-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Twsg1 twisted gastrulation BMP signaling modulator 1 involved_in ISO (PMID:17164348) BHF-UCL PMID:17164348 NCBI chrNW_004955402:2,652,020...2,685,350
Ensembl chrNW_004955402:2,652,020...2,686,117 		JBrowse link
negative regulation of CD4-positive, alpha-beta T cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd160 CD160 molecule involved_in ISO (PMID:18193050) UniProt PMID:18193050 NCBI chrNW_004955568:365,700...372,149 JBrowse link
negative regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta involved_in ISO (MGI:3772948|PMID:18258917) UniProt PMID:18258917 MGI:3772948 NCBI chrNW_004955484:9,503,286...9,557,066
Ensembl chrNW_004955484:9,503,227...9,557,066 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:22473704) UniProt PMID:22473704 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in ISO (MGI:3772948|PMID:18258917) UniProt PMID:18258917 MGI:3772948 NCBI chrNW_004955452:4,580,444...4,606,820
Ensembl chrNW_004955452:4,579,331...4,636,884 		JBrowse link
negative regulation of CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO (MGI:5908533|PMID:25009204) UniProt PMID:25009204 MGI:5908533 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G Cblb Cbl proto-oncogene B acts_upstream_of_or_within ISO (PMID:14973438) MGI PMID:14973438 NCBI chrNW_004955427:6,601,651...6,812,896
Ensembl chrNW_004955427:6,604,820...6,812,882 		JBrowse link
G Cd274 CD274 molecule involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:17028180) MGI PMID:17028180 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Itch itchy E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:14973438) MGI PMID:14973438 NCBI chrNW_004955422:26,810,829...26,918,517
Ensembl chrNW_004955422:26,809,972...26,887,123 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:20209097)
(MGI:5688819|PMID:25065622)		 UniProt PMID:20209097 PMID:25065622 MGI:5688819 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 acts_upstream_of_or_within ISO (PMID:15568026) MGI PMID:15568026 NCBI chrNW_004955486:8,670,182...8,684,677 JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 involved_in ISO (PMID:17164348) BHF-UCL PMID:17164348 NCBI chrNW_004955402:2,652,020...2,685,350
Ensembl chrNW_004955402:2,652,020...2,686,117 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in
acts_upstream_of_or_within		 ISO (PMID:24691993)
(PMID:21383057)		 UniProt
MGI		 PMID:21383057 PMID:24691993 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
negative regulation of CD8-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 molecule involved_in ISO (PMID:28813410), (PMID:28813417) UniProt PMID:28813410 PMID:28813417 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Dapl1 death associated protein like 1 involved_in ISO (MGI:7414447|PMID:35773432) UniProt PMID:35773432 MGI:7414447 NCBI chrNW_004955449:14,696,413...14,716,520
Ensembl chrNW_004955449:14,696,348...14,717,031 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143 		JBrowse link
negative regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:6840447|PMID:24515893) UniProt PMID:24515893 MGI:6840447 NCBI chrNW_004955491:5,498,472...5,513,389
Ensembl chrNW_004955491:5,499,033...5,517,319 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (MGI:6140589|PMID:24880459) UniProt PMID:24880459 MGI:6140589 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5446998|PMID:22730529), (MGI:6140589|PMID:24880459) UniProt PMID:22730529 PMID:24880459 MGI:5446998 MGI:6140589 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
negative regulation of CD8-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:6840447|PMID:24515893) UniProt PMID:24515893 MGI:6840447 NCBI chrNW_004955491:5,498,472...5,513,389
Ensembl chrNW_004955491:5,499,033...5,517,319 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
negative regulation of cytotoxic T cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISO (PMID:18424730) UniProt PMID:18424730 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:32647003) UniProt PMID:32647003 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
negative regulation of establishment of T cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (PMID:23241886) UniProt PMID:23241886 NCBI chrNW_004955483:2,048,236...2,257,078
Ensembl chrNW_004955483:2,048,324...2,256,589 		JBrowse link
negative regulation of immature T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:11092955 RGD:9685051 NCBI chrNW_004955403:48,341,731...48,346,595
Ensembl chrNW_004955403:48,343,597...48,346,595 		JBrowse link
negative regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:12421925) BHF-UCL PMID:12421925 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of_or_within ISO (PMID:23487419) MGI PMID:23487419 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:16230479) MGI PMID:16230479 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:3836494|PMID:19109233) BHF-UCL PMID:19109233 MGI:3836494 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Tmem131l transmembrane 131 like involved_in ISO (PMID:23690469) UniProt PMID:23690469 NCBI chrNW_004955471:7,797,687...7,952,265
Ensembl chrNW_004955471:7,797,780...7,952,131 		JBrowse link
negative regulation of immunological synapse formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5705214|PMID:24337741) UniProt PMID:24337741 MGI:5705214 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Lgals3 galectin 3 involved_in ISO (MGI:4355752|PMID:19706535) BHF-UCL PMID:19706535 MGI:4355752 NCBI chrNW_004955409:8,448,120...8,452,437
Ensembl chrNW_004955409:8,447,774...8,452,438 		JBrowse link
negative regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly(ADP-ribose) polymerase family member 3 involved_in ISO (MGI:6214451|PMID:26000965) UniProt PMID:26000965 MGI:6214451 NCBI chrNW_004955532:3,591,484...3,597,549
Ensembl chrNW_004955532:3,591,499...3,597,549 		JBrowse link
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:10490661) MGI PMID:10490661 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384) MGI PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
negative regulation of lymphocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:11452127) MGI PMID:11452127 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within ISO (PMID:11452127) MGI PMID:11452127 NCBI chrNW_004955470:2,065,468...2,167,909
Ensembl chrNW_004955470:2,065,411...2,167,909 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within ISO (PMID:11452127) MGI PMID:11452127 NCBI chrNW_004955416:8,361,722...8,377,629
Ensembl chrNW_004955416:8,359,207...8,377,692 		JBrowse link
negative regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo7 F-box protein 7 acts_upstream_of_or_within ISO (PMID:21652635) MGI PMID:21652635 NCBI chrNW_004955405:41,429,421...41,449,670
Ensembl chrNW_004955405:41,433,082...41,453,909 		JBrowse link
negative regulation of lymphocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384)
(PMID:16227984)		 MGI PMID:16227984 PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Gal galanin and GMAP prepropeptide ISO RGD PMID:12119556 RGD:728693 NCBI chrNW_004955422:17,202,770...17,207,948
Ensembl chrNW_004955422:17,202,946...17,207,948 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Lst1 leukocyte specific transcript 1 involved_in ISO (PMID:10706707) UniProt PMID:10706707 NCBI chrNW_004955437:127,430...129,835 JBrowse link
G Rassf5 Ras association domain family member 5 acts_upstream_of_or_within ISO (PMID:21194982) MGI PMID:21194982 NCBI chrNW_004955406:42,086,081...42,159,204
Ensembl chrNW_004955406:42,086,081...42,159,204 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (PMID:20624318) UniProt PMID:20624318 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521 		JBrowse link
negative regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen like 2 acts_upstream_of_or_within ISO (PMID:29341118) MGI PMID:29341118 NCBI chrNW_004955410:7,899,263...7,903,499
Ensembl chrNW_004955410:7,899,309...7,902,722 		JBrowse link
negative regulation of natural killer cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clnk cytokine dependent hematopoietic cell linker involved_in ISO (MGI:3047506|PMID:15199160), (MGI:3774350|PMID:16439675) UniProt PMID:15199160 PMID:16439675 MGI:3047506 MGI:3774350 NCBI chrNW_004955549:2,166,891...2,375,902 JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:3774350|PMID:16439675) UniProt PMID:16439675 MGI:3774350 NCBI chrNW_004955452:6,840,274...6,863,460
Ensembl chrNW_004955452:6,841,802...6,863,542 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5705210|PMID:25337993) UniProt PMID:25337993 MGI:5705210 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (MGI:5491117|PMID:23408620) UniProt PMID:23408620 MGI:5491117 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Pibf1 progesterone immunomodulatory binding factor 1 involved_in ISO (PMID:12516630) UniProt PMID:12516630 NCBI chrNW_004955404:33,713,903...33,897,622
Ensembl chrNW_004955404:33,714,193...33,897,622 		JBrowse link
G Rhbdd3 rhomboid domain containing 3 acts_upstream_of_or_within ISO (PMID:23610400) MGI PMID:23610400 NCBI chrNW_004955455:3,564,867...3,570,910
Ensembl chrNW_004955455:3,564,867...3,570,798 		JBrowse link
negative regulation of natural killer cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals9 galectin 9 involved_in ISO (MGI:5491117|PMID:23408620) UniProt PMID:23408620 MGI:5491117 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
negative regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pglyrp1 peptidoglycan recognition protein 1 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955495:7,785,398...7,792,158
Ensembl chrNW_004955495:7,785,193...7,796,210 		JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955592:100,022...111,609
Ensembl chrNW_004955592:100,088...111,610 		JBrowse link
negative regulation of NK T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300a molecule involved_in ISO (PMID:10540326) UniProt PMID:10540326 NCBI chrNW_004955553:1,335,854...1,356,001
Ensembl chrNW_004955553:1,336,227...1,460,376 		JBrowse link
negative regulation of NK T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5449456|PMID:23105140) UniProt PMID:23105140 MGI:5449456 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
negative regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:15240705) MGI PMID:15240705 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
negative regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (MGI:5320871|PMID:22080863) UniProt PMID:22080863 MGI:5320871 NCBI chrNW_004955402:771,410...846,671 JBrowse link
negative regulation of pre-B cell receptor expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:5444793|PMID:22949502) ARUK-UCL PMID:22949502 MGI:5444793 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
negative regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (IN blood group) involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 involved_in ISO (PMID:18641304) BHF-UCL PMID:18641304 NCBI chrNW_004955457:11,028,707...11,034,898
Ensembl chrNW_004955457:11,028,698...11,073,460 		JBrowse link
G Hspb1 heat shock protein family B (small) member 1 ISO RGD PMID:30287503 RGD:38549580 NCBI chrNW_004955844:8,094...9,565
Ensembl chrNW_004955844:7,790...10,004 		JBrowse link
G Irf1 interferon regulatory factor 1 involved_in ISO (MGI:3803082|PMID:18641303) UniProt PMID:18641303 MGI:3803082 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973 		JBrowse link
G Lag3 lymphocyte activating 3 involved_in ISO (MGI:3510279|PMID:15485628) UniProt PMID:15485628 MGI:3510279 NCBI chrNW_004955413:4,379,529...4,385,456
Ensembl chrNW_004955413:4,378,972...4,385,909 		JBrowse link
G Mdk midkine involved_in ISO (PMID:22323540) UniProt PMID:22323540 NCBI chrNW_004955422:1,655,351...1,657,026
Ensembl chrNW_004955422:1,655,358...1,657,044 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3806904|PMID:18713990) BHF-UCL PMID:18713990 MGI:3806904 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
negative regulation of T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dusp22 dual specificity phosphatase 22 acts_upstream_of_or_within ISO (PMID:24714587) MGI PMID:24714587 NCBI chrNW_004955465:12,551,063...12,597,386
Ensembl chrNW_004955465:12,551,063...12,592,572 		JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in ISO (PMID:12447358) UniProt PMID:12447358 NCBI chrNW_004955451:17,064,739...17,069,964 JBrowse link
G Fgl1 fibrinogen like 1 involved_in ISO (MGI:6273588|PMID:30580966) UniProt PMID:30580966 MGI:6273588 NCBI chrNW_004955552:1,784,046...1,813,935
Ensembl chrNW_004955552:1,783,412...1,813,935 		JBrowse link
G Gpnmb glycoprotein nmb involved_in ISO (PMID:19350579) ParkinsonsUK-UCL PMID:19350579 NCBI chrNW_004955410:25,554,279...25,583,368
Ensembl chrNW_004955410:25,553,973...25,582,500 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:18997793) MGI PMID:18997793 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:28891065) UniProt PMID:28891065 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034 		JBrowse link
G Ildr2 immunoglobulin like domain containing receptor 2 involved_in ISO (PMID:29431694)
(MGI:6121682|PMID:29431694)		 UniProt PMID:29431694 MGI:6121682 NCBI chrNW_004955462:9,953,393...10,016,339
Ensembl chrNW_004955462:9,953,452...10,012,518 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (MGI:3655405|PMID:9498750) BHF-UCL PMID:9498750 MGI:3655405 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Lag3 lymphocyte activating 3 involved_in
acts_upstream_of_or_within		 ISO (MGI:2385414|PMID:12209638), (MGI:6273588|PMID:30580966)
(PMID:12421911)		 UniProt
MGI		 PMID:12209638 PMID:12421911 PMID:30580966 MGI:2385414 MGI:6273588 NCBI chrNW_004955413:4,379,529...4,385,456
Ensembl chrNW_004955413:4,378,972...4,385,909 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870) ARUK-UCL PMID:18619870 MGI:3803048 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
G Lax1 lymphocyte transmembrane adaptor 1 involved_in ISO (PMID:12359715) HGNC-UCL PMID:12359715 NCBI chrNW_004955406:39,656,549...39,667,448
Ensembl chrNW_004955406:39,656,128...39,670,244 		JBrowse link
G Pag1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 involved_in ISO (MGI:3687921|PMID:12612075) HGNC-UCL PMID:12612075 MGI:3687921 NCBI chrNW_004955444:487,028...636,440
Ensembl chrNW_004955444:608,711...629,146 		JBrowse link
G Pdcd1 programmed cell death 1 involved_in ISO (PMID:21276005), (PMID:38377992) UniProt PMID:21276005 PMID:38377992 NCBI chrNW_004955542:49,290...57,747
Ensembl chrNW_004955542:49,259...58,823 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:21874024) MGI PMID:21874024 NCBI chrNW_004955424:20,212,077...20,263,761
Ensembl chrNW_004955424:20,211,600...20,263,761 		JBrowse link
G Pla2g2d phospholipase A2 group IID acts_upstream_of_or_within ISO (PMID:19564598) MGI PMID:19564598 NCBI chrNW_004955452:738,133...743,718
Ensembl chrNW_004955452:736,600...743,806 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:18299186)
(MGI:4946183|PMID:21044313)		 BHF-UCL PMID:18299186 PMID:21044313 MGI:4946183 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Socs6 suppressor of cytokine signaling 6 acts_upstream_of_or_within ISO (PMID:20007709) MGI PMID:20007709 NCBI chrNW_004955402:53,847,859...53,876,245
Ensembl chrNW_004955402:53,852,510...53,876,245 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:9645617) MGI PMID:9645617 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:12646629) MGI PMID:12646629 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Tigit T cell immunoreceptor with Ig and ITIM domains involved_in
acts_upstream_of_or_within		 ISO (PMID:19011627)
(PMID:21199897)		 MGI PMID:19011627 PMID:21199897 NCBI chrNW_004955427:14,358,326...14,381,074
Ensembl chrNW_004955427:14,360,272...14,382,524 		JBrowse link
G Tnfaip8l2 TNF alpha induced protein 8 like 2 acts_upstream_of_or_within ISO (PMID:21963221) MGI PMID:21963221 NCBI chrNW_004955588:514,567...517,314
Ensembl chrNW_004955588:514,567...517,314 		JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in ISO (PMID:38377992) UniProt PMID:38377992 NCBI chrNW_004955411:22,548,139...22,577,287
Ensembl chrNW_004955411:22,548,219...22,580,903 		JBrowse link
G Vtcn1 V-set domain containing T cell activation inhibitor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:16606666)
(PMID:15585831)		 UniProt
MGI		 PMID:15585831 PMID:16606666 NCBI chrNW_004955435:20,250,236...20,332,329
Ensembl chrNW_004955435:20,256,954...20,332,330 		JBrowse link
negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:26492563) UniProt PMID:26492563 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Lgals3 galectin 3 involved_in ISO (MGI:4355752|PMID:19706535) BHF-UCL PMID:19706535 MGI:4355752 NCBI chrNW_004955409:8,448,120...8,452,437
Ensembl chrNW_004955409:8,447,774...8,452,438 		JBrowse link
negative regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (PMID:7679955) MGI PMID:7679955 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:12794108) MGI PMID:12794108 NCBI chrNW_004955482:9,416,456...9,447,265
Ensembl chrNW_004955482:9,417,116...9,446,239 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO (PMID:16290204) MGI PMID:16290204 NCBI chrNW_004955415:31,880,801...31,884,453
Ensembl chrNW_004955415:31,880,588...31,884,778 		JBrowse link
negative regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:12421925) BHF-UCL PMID:12421925 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (MGI:3713603|PMID:16339515) BHF-UCL PMID:16339515 MGI:3713603 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:3836494|PMID:19109233) BHF-UCL PMID:19109233 MGI:3836494 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Nfkbid NFKB inhibitor delta acts_upstream_of_or_within ISO (PMID:11931770) MGI PMID:11931770 NCBI chrNW_004955468:2,680,934...2,688,797
Ensembl chrNW_004955468:2,680,806...2,689,155 		JBrowse link
G Rag2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10981962) MGI PMID:10981962 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Zc3h8 zinc finger CCCH-type containing 8 involved_in ISO (PMID:12153508) UniProt PMID:12153508 NCBI chrNW_004955470:1,888,903...1,913,077
Ensembl chrNW_004955470:1,888,871...1,916,581 		JBrowse link
negative regulation of T cell homeostatic proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:16769998) MGI PMID:16769998 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
negative regulation of T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:16709924) UniProt PMID:16709924 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972 		JBrowse link
G Btla B and T lymphocyte associated acts_upstream_of_or_within ISO (PMID:12796776) MGI PMID:12796776 NCBI chrNW_004955427:12,804,467...12,837,178
Ensembl chrNW_004955427:12,802,581...12,837,031 		JBrowse link
G Cd274 CD274 molecule acts_upstream_of_or_within ISO (PMID:17016562) MGI PMID:17016562 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Cd276 CD276 molecule acts_upstream_of_or_within ISO (PMID:12925852) MGI PMID:12925852 NCBI chrNW_004955450:3,884,437...3,896,416 JBrowse link
G Cd37 CD37 molecule acts_upstream_of_or_within ISO (PMID:20709950) MGI PMID:20709950 NCBI chrNW_004955559:1,465,937...1,471,249
Ensembl chrNW_004955559:1,465,937...1,471,249 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:17081782) MGI PMID:17081782 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Cebpb CCAAT enhancer binding protein beta involved_in ISO (MGI:3773092|PMID:16585579) UniProt PMID:16585579 MGI:3773092 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of_or_within ISO (PMID:19632227) MGI PMID:19632227 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979 		JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 ISO RGD PMID:15849541 RGD:2302005 NCBI chrNW_004955457:11,028,707...11,034,898
Ensembl chrNW_004955457:11,028,698...11,073,460 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO (PMID:17724087) MGI PMID:17724087 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (PMID:28169360) UniProt PMID:28169360 NCBI chrNW_004955437:14,510,488...14,628,768
Ensembl chrNW_004955437:14,510,488...14,628,768 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (MGI:3043440|PMID:14963332) BHF-UCL PMID:14963332 MGI:3043440 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:21458306), (PMID:23169781)
(PMID:16203996)
(PMID:16769892)
(PMID:15466453)		 UniProt
MGI		 PMID:15466453 PMID:16203996 PMID:16769892 PMID:21458306 PMID:23169781 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Glmn glomulin, FKBP associated protein involved_in ISO (PMID:12604780) UniProt PMID:12604780 NCBI chrNW_004955423:2,195,428...2,233,389
Ensembl chrNW_004955423:2,195,423...2,232,706 		JBrowse link
G Gpnmb glycoprotein nmb involved_in ISO (PMID:19350579) ParkinsonsUK-UCL PMID:19350579 NCBI chrNW_004955410:25,554,279...25,583,368
Ensembl chrNW_004955410:25,553,973...25,582,500 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:2679123|PMID:14556006) UniProt PMID:14556006 MGI:2679123 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (PMID:18077788) MGI PMID:18077788 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829 		JBrowse link
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of_or_within ISO (PMID:19124723) MGI PMID:19124723 NCBI chrNW_004955501:1,826,687...1,863,261 JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:12702495) MGI PMID:12702495 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132) UniProt PMID:17356132 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034 		JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 acts_upstream_of_or_within ISO (PMID:11313860) MGI PMID:11313860 NCBI chrNW_004955460:9,340,728...9,672,478
Ensembl chrNW_004955460:9,340,681...9,672,134 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 acts_upstream_of_or_within ISO (PMID:15670816) MGI PMID:15670816 NCBI chrNW_004955449:13,834,561...13,875,864
Ensembl chrNW_004955449:13,835,811...13,859,699 		JBrowse link
G Pawr pro-apoptotic WT1 regulator acts_upstream_of_or_within ISO (PMID:12970181) MGI PMID:12970181 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710 		JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 acts_upstream_of_or_within ISO (PMID:11224527), (PMID:17016562) MGI PMID:11224527 PMID:17016562 NCBI chrNW_004955434:9,540,047...9,559,335 JBrowse link
G Pde5a phosphodiesterase 5A acts_upstream_of_or_within ISO (PMID:17101732) MGI PMID:17101732 NCBI chrNW_004955428:20,785,497...20,904,717
Ensembl chrNW_004955428:20,785,423...20,904,717 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:21874024) MGI PMID:21874024 NCBI chrNW_004955424:20,212,077...20,263,761
Ensembl chrNW_004955424:20,211,600...20,263,761 		JBrowse link
G Pla2g2d phospholipase A2 group IID acts_upstream_of_or_within ISO (PMID:19564598) MGI PMID:19564598 NCBI chrNW_004955452:738,133...743,718
Ensembl chrNW_004955452:736,600...743,806 		JBrowse link
G Pla2g2f phospholipase A2 group IIF acts_upstream_of_or_within ISO (PMID:16931517) MGI PMID:16931517 NCBI chrNW_004955452:755,738...765,304
Ensembl chrNW_004955452:755,478...763,571 		JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:16027169) MGI PMID:16027169 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of_or_within ISO (PMID:9064344) MGI PMID:9064344 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (PMID:27556504) UniProt PMID:27556504 NCBI chrNW_004955483:2,048,236...2,257,078
Ensembl chrNW_004955483:2,048,324...2,256,589 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (PMID:15356574) MGI PMID:15356574 NCBI chrNW_004955599:688,414...690,644 JBrowse link
G Sdc4 syndecan 4 involved_in ISO (PMID:19350579) ParkinsonsUK-UCL PMID:19350579 NCBI chrNW_004955445:11,990,916...12,009,178
Ensembl chrNW_004955445:11,990,792...12,011,553 		JBrowse link
G Sftpd surfactant protein D ISO RGD PMID:9794387 RGD:4144057 NCBI chrNW_004955510:213,468...226,096
Ensembl chrNW_004955510:213,438...225,896 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10981962) MGI PMID:10981962 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Spn sialophorin involved_in
acts_upstream_of_or_within		 ISO (MGI:3847636|PMID:17638845)
(PMID:15117976), (PMID:7566153), (PMID:9645617)		 UniProt
MGI		 PMID:7566153 PMID:9645617 PMID:15117976 PMID:17638845 MGI:3847636 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:17481928) MGI PMID:17481928 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 involved_in ISO (MGI:2137821|PMID:11485735) UniProt PMID:11485735 MGI:2137821 NCBI chrNW_004955437:11,877,051...11,915,220
Ensembl chrNW_004955437:11,876,895...11,915,460 		JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO (PMID:16027169) MGI PMID:16027169 NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362 		JBrowse link
G Tspan32 tetraspanin 32 acts_upstream_of_or_within ISO (PMID:20709950) MGI PMID:20709950 NCBI chrNW_004955422:14,101,833...14,121,784
Ensembl chrNW_004955422:14,101,833...14,116,101 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 acts_upstream_of_or_within ISO (PMID:17016562) MGI PMID:17016562 NCBI chrNW_004955475:5,461,512...5,481,552
Ensembl chrNW_004955475:5,461,064...5,481,564 		JBrowse link
G Vtcn1 V-set domain containing T cell activation inhibitor 1 involved_in ISO (PMID:16606666) UniProt PMID:16606666 NCBI chrNW_004955435:20,250,236...20,332,329
Ensembl chrNW_004955435:20,256,954...20,332,330 		JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D acts_upstream_of_or_within ISO (PMID:24415781) MGI PMID:24415781 NCBI chrNW_004955439:11,761,099...11,787,508
Ensembl chrNW_004955439:11,768,812...11,785,230 		JBrowse link
negative regulation of T-helper 1 cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
negative regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (MGI:5565031|PMID:24463518) UniProt PMID:24463518 MGI:5565031 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955493:5,546,340...5,580,745
Ensembl chrNW_004955493:5,545,944...5,582,422 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (MGI:3719947|PMID:16020505) BHF-UCL PMID:16020505 MGI:3719947 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4942267|PMID:9670042) BHF-UCL PMID:9670042 MGI:4942267 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
negative regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (MGI:5565031|PMID:24463518) UniProt PMID:24463518 MGI:5565031 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:23169781) UniProt PMID:23169781 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il2 interleukin 2 involved_in ISO (MGI:5634593|PMID:25642768) BHF-UCL PMID:25642768 MGI:5634593 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:18792410) MGI PMID:18792410 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:6142401|PMID:25282160) UniProt PMID:25282160 MGI:6142401 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in ISO (MGI:6142401|PMID:25282160) UniProt PMID:25282160 MGI:6142401 NCBI chrNW_004955419:5,054,288...5,103,926
Ensembl chrNW_004955419:5,054,289...5,103,926 		JBrowse link
G Smad7 SMAD family member 7 involved_in ISO (MGI:5634593|PMID:25642768) BHF-UCL PMID:25642768 MGI:5634593 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (MGI:4868293|PMID:21151104) UniProt PMID:21151104 MGI:4868293 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (PMID:23034280) MGI PMID:23034280 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (MGI:6142401|PMID:25282160) UniProt PMID:25282160 MGI:6142401 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
negative regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Loxl3 lysyl oxidase like 3 involved_in ISO (MGI:5825383|PMID:28065600)
(PMID:28065600)		 UniProt PMID:28065600 MGI:5825383 NCBI chrNW_004955424:11,236,415...11,255,801
Ensembl chrNW_004955424:11,236,836...11,259,570 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (MGI:4868293|PMID:21151104) UniProt PMID:21151104 MGI:4868293 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
G Tnfsf18 TNF superfamily member 18 involved_in ISO (MGI:5551556|PMID:24107315) UniProt PMID:24107315 MGI:5551556 NCBI chrNW_004955406:13,391,162...13,402,479 JBrowse link
negative regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in ISO (PMID:17008549) UniProt PMID:17008549 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (MGI:5565031|PMID:24463518) UniProt PMID:24463518 MGI:5565031 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:12594267) MGI PMID:12594267 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (MGI:3687909|PMID:12242343) UniProt PMID:12242343 MGI:3687909 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389 		JBrowse link
negative regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within ISO (PMID:15917799) MGI PMID:15917799 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
negative T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Themis thymocyte selection associated involved_in ISO (MGI:4352756|PMID:19597499), (MGI:4352757|PMID:19597498) UniProt PMID:19597498 PMID:19597499 MGI:4352756 MGI:4352757 NCBI chrNW_004955436:8,743,835...8,909,040 JBrowse link
negative thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aire autoimmune regulator acts_upstream_of_or_within ISO (PMID:23382543) MGI PMID:23382543 NCBI chrNW_004955407:41,157,503...41,165,032
Ensembl chrNW_004955407:41,157,484...41,165,014 		JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO (PMID:23382543) MGI PMID:23382543 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827 		JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (MGI:3847607|PMID:17785582) BHF-UCL PMID:17785582 MGI:3847607 NCBI chrNW_004955451:15,086,119...15,101,862
Ensembl chrNW_004955451:15,086,119...15,095,561 		JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (PMID:7630421) MGI PMID:7630421 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (PMID:7679955) MGI PMID:7679955 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in ISO (MGI:4355451|PMID:19667090) BHF-UCL PMID:19667090 MGI:4355451 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Mink1 misshapen like kinase 1 acts_upstream_of_or_within ISO (PMID:15608642) MGI PMID:15608642 NCBI chrNW_004955467:10,256,722...10,312,011
Ensembl chrNW_004955467:10,256,434...10,313,834 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:8666928) MGI PMID:8666928 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3834308|PMID:17227833) BHF-UCL PMID:17227833 MGI:3834308 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:7630421) MGI PMID:7630421 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
NK T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4f C-type lectin domain family 4 member F acts_upstream_of_or_within ISO (PMID:23762286) MGI PMID:23762286 NCBI chrNW_004955424:14,365,348...14,379,664
Ensembl chrNW_004955424:14,367,192...14,381,350 		JBrowse link
NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO (PMID:16223777) MGI PMID:16223777 NCBI chrNW_004955449:332,563...411,218
Ensembl chrNW_004955449:338,193...411,218 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:19620306) MGI PMID:19620306 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180 		JBrowse link
G Itk IL2 inducible T cell kinase acts_upstream_of_or_within ISO (PMID:18292523) MGI PMID:18292523 NCBI chrNW_004955408:11,387,595...11,447,896
Ensembl chrNW_004955408:11,387,589...11,448,199 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
G Stk17a serine/threonine kinase 17a involved_in ISO (PMID:26423156) MGI PMID:26423156 NCBI chrNW_004955460:288,335...307,033
Ensembl chrNW_004955460:288,843...307,386 		JBrowse link
G Txk TXK tyrosine kinase acts_upstream_of_or_within ISO (PMID:18292523) MGI PMID:18292523 NCBI chrNW_004955443:474,099...556,697
Ensembl chrNW_004955443:474,099...556,697 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5449456|PMID:23105140) UniProt PMID:23105140 MGI:5449456 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
G Znf683 zinc finger protein 683 acts_upstream_of_or_within ISO (PMID:22885984) MGI PMID:22885984 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
NK T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:3773459|PMID:18195075) UniProt PMID:18195075 MGI:3773459 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
NK T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf4 E74 like ETS transcription factor 4 involved_in ISO (MGI:2388503|PMID:12387738) UniProt PMID:12387738 MGI:2388503 NCBI chrNW_004955473:4,934,770...4,986,283
Ensembl chrNW_004955473:4,942,385...4,986,433 		JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:10704459) MGI PMID:10704459 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19423665) MGI PMID:19423665 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982 		JBrowse link
plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of ISO (PMID:15240705) MGI PMID:15240705 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29259245) MGI PMID:29259245 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359 		JBrowse link
G Itm2a integral membrane protein 2A acts_upstream_of_or_within ISO (PMID:24831988) MGI PMID:24831988 NCBI chrNW_004955557:2,235,223...2,243,911
Ensembl chrNW_004955557:2,235,223...2,243,927 		JBrowse link
G Lgals1 galectin 1 acts_upstream_of_or_within ISO (PMID:21753146) MGI PMID:21753146 NCBI chrNW_004955413:24,072,086...24,075,452
Ensembl chrNW_004955413:24,072,086...24,075,452 		JBrowse link
G Lgals8 galectin 8 acts_upstream_of_or_within ISO (PMID:21753146) MGI PMID:21753146 NCBI chrNW_004955492:3,673,233...3,693,777
Ensembl chrNW_004955492:3,673,233...3,693,776 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:25124037) MGI PMID:25124037 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO (PMID:10926756) MGI PMID:10926756 NCBI chrNW_004955507:5,454,871...5,457,247
Ensembl chrNW_004955507:5,455,087...5,457,660 		JBrowse link
positive regulation of activated T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in ISO (PMID:15944249) UniProt PMID:15944249 NCBI chrNW_004955437:645,482...648,607
Ensembl chrNW_004955437:645,897...648,479 		JBrowse link
G Cd24 CD24 molecule involved_in ISO (PMID:11272271) UniProt PMID:11272271 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cd86 CD86 molecule ISO RGD PMID:9237108 RGD:632472 NCBI chrNW_004955427:21,375,820...21,436,767
Ensembl chrNW_004955427:21,375,794...21,435,874 		JBrowse link
G Epo erythropoietin ISO RGD PMID:21649646 RGD:10401062 NCBI chrNW_004955573:203,875...206,078
Ensembl chrNW_004955573:203,441...206,355 		JBrowse link
G Fadd Fas associated via death domain involved_in ISO (MGI:5291865|PMID:21876153) UniProt PMID:21876153 MGI:5291865 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial acts_upstream_of_or_within ISO (PMID:18971390) MGI PMID:18971390 NCBI chrNW_004955431:17,291,890...17,363,611
Ensembl chrNW_004955431:17,291,270...17,363,714 		JBrowse link
G Hhla2 HHLA2 member of B7 family involved_in ISO (PMID:23784006) UniProt PMID:23784006 NCBI chrNW_004955427:8,944,387...9,007,648
Ensembl chrNW_004955427:8,926,229...9,009,156 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15944249) UniProt PMID:15944249 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:15694994) BHF-UCL PMID:15694994 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152 		JBrowse link
G Igf2 insulin like growth factor 2 involved_in ISO (PMID:15694994) BHF-UCL PMID:15694994 NCBI chrNW_004955422:13,880,525...13,907,963
Ensembl chrNW_004955422:13,880,471...13,888,566 		JBrowse link
G Igfbp2 insulin like growth factor binding protein 2 involved_in ISO (PMID:15694994) BHF-UCL PMID:15694994 NCBI chrNW_004955453:16,556,873...16,584,737
Ensembl chrNW_004955453:16,557,194...16,584,634 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:11114383), (PMID:1674604) UniProt PMID:1674604 PMID:11114383 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:11114383) BHF-UCL PMID:11114383 NCBI chrNW_004955524:3,276,932...3,299,617 JBrowse link
G Il18 interleukin 18 involved_in ISO (PMID:8766574) UniProt PMID:8766574 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:10072077), (PMID:1830926)
(PMID:10485657), (PMID:7584142)
(PMID:1830926)		 MGI PMID:1830926 PMID:7584142 PMID:10072077 PMID:10485657 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:11114383) BHF-UCL PMID:11114383 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:7584142) MGI PMID:7584142 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:10485657), (PMID:9841920) MGI PMID:9841920 PMID:10485657 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Jak3 Janus kinase 3 ISO RGD PMID:11781254 RGD:1600262 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISO (MGI:2150686|PMID:8627154) UniProt PMID:8627154 MGI:2150686 NCBI chrNW_004955496:6,934,542...7,059,745
Ensembl chrNW_004955496:6,908,224...7,059,816 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:18045535) CAFA PMID:18045535 NCBI chrNW_004955414:16,436,899...16,442,325
Ensembl chrNW_004955414:16,436,899...16,443,073 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (MGI:5700493|PMID:9126961) UniProt PMID:9126961 MGI:5700493 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:10072077), (PMID:10485657) MGI PMID:10072077 PMID:10485657 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:10072077), (PMID:10485657)
(PMID:9841920)		 MGI PMID:9841920 PMID:10072077 PMID:10485657 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Tmigd2 transmembrane and immunoglobulin domain containing 2 involved_in ISO (PMID:23784006) UniProt PMID:23784006 NCBI chrNW_004955495:4,561,251...4,578,432
Ensembl chrNW_004955495:4,572,442...4,581,628 		JBrowse link
G Tnfsf4 TNF superfamily member 4 ISO RGD PMID:9790919 RGD:634509 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Tnfsf9 TNF superfamily member 9 ISO RGD PMID:19187795 RGD:2317344 NCBI chrNW_004955495:3,101,965...3,107,552 JBrowse link
positive regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:11067867), (PMID:16670300)
(PMID:11067867), (PMID:12163459), (PMID:16670300)		 MGI PMID:11067867 PMID:12163459 PMID:16670300 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in ISO (MGI:3695957|PMID:15855276) BHF-UCL PMID:15855276 MGI:3695957 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:3836494|PMID:19109233) BHF-UCL PMID:19109233 MGI:3836494 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (PMID:15064401) MGI PMID:15064401 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180 		JBrowse link
G Nkap NFKB activating protein involved_in ISO (PMID:19409814) UniProt PMID:19409814 NCBI chrNW_004955534:106,122...119,508
Ensembl chrNW_004955534:106,122...119,344 		JBrowse link
G Pnp purine nucleoside phosphorylase acts_upstream_of_or_within ISO (PMID:16964310) MGI PMID:16964310 NCBI chrNW_004955550:1,290,816...1,299,553
Ensembl chrNW_004955550:1,290,244...1,298,068 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (MGI:5640904|PMID:25398325) CACAO PMID:25398325 MGI:5640904 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3029054|PMID:14764698) BHF-UCL PMID:14764698 MGI:3029054 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:9275205) MGI PMID:9275205 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:7630421)
(PMID:9208839)
(PMID:9275205)		 MGI PMID:7630421 PMID:9208839 PMID:9275205 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
positive regulation of alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISO (MGI:3699670|PMID:14662900) BHF-UCL PMID:14662900 MGI:3699670 NCBI chrNW_004955420:25,641,184...25,664,413 JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:1346270), (PMID:9368605)
(PMID:1385153), (PMID:7908303)
(PMID:9368605)		 MGI PMID:1346270 PMID:1385153 PMID:7908303 PMID:9368605 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cd80 CD80 molecule acts_upstream_of_or_within ISO (PMID:1385153) MGI PMID:1385153 NCBI chrNW_004955427:19,237,251...19,274,001
Ensembl chrNW_004955427:19,236,445...19,261,517 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:7751624) MGI PMID:7751624 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:9275205) MGI PMID:9275205 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3772919|PMID:16670306) BHF-UCL PMID:16670306 MGI:3772919 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:9275205) MGI PMID:9275205 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
positive regulation of B cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin2 akirin 2 involved_in ISO (MGI:6855963|PMID:26041538) UniProt PMID:26041538 MGI:6855963 NCBI chrNW_004955411:14,600,106...14,619,374
Ensembl chrNW_004955411:14,600,106...14,619,069 		JBrowse link
G Cd81 CD81 molecule involved_in ISO (MGI:5476553|PMID:23499492) UniProt PMID:23499492 MGI:5476553 NCBI chrNW_004955422:14,155,682...14,175,181
Ensembl chrNW_004955422:14,155,682...14,175,181 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:16129705), (PMID:8566034), (PMID:9798653) MGI PMID:8566034 PMID:9798653 PMID:16129705 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:3491322) BHF-UCL PMID:3491322 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:20844241) BHF-UCL PMID:20844241 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004955424:20,212,077...20,263,761
Ensembl chrNW_004955424:20,211,600...20,263,761 		JBrowse link
G Sh3kbp1 SH3 domain containing kinase binding protein 1 involved_in ISO (PMID:29636373) UniProt PMID:29636373 NCBI chrNW_004955509:6,157...344,930
Ensembl chrNW_004955509:4,960...345,012 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12855817) MGI PMID:12855817 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513 		JBrowse link
G Tlr9 toll like receptor 9 involved_in ISO (PMID:23857366) UniProt PMID:23857366 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4942267|PMID:9670042) BHF-UCL PMID:9670042 MGI:4942267 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chrNW_004955514:1,682,641...1,687,881 JBrowse link
positive regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (MGI:5002406|PMID:21423173) UniProt PMID:21423173 MGI:5002406 NCBI chrNW_004955489:5,394,553...5,567,295
Ensembl chrNW_004955489:5,394,357...5,567,405 		JBrowse link
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (PMID:12431371) MGI PMID:12431371 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO (PMID:9252128)
(PMID:23918385)		 MGI PMID:9252128 PMID:23918385 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:16797412) MGI PMID:16797412 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within ISO (PMID:10704460), (PMID:9620849) MGI PMID:9620849 PMID:10704460 NCBI chrNW_004955453:2,938,659...3,037,211
Ensembl chrNW_004955453:2,938,659...3,037,211 		JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISO (MGI:5013661|PMID:21572390) UniProt PMID:21572390 MGI:5013661 NCBI chrNW_004955409:37,438,924...37,448,704
Ensembl chrNW_004955409:37,440,541...37,448,437 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (MGI:3818191|PMID:19015308) UniProt PMID:19015308 MGI:3818191 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (MGI:4839685|PMID:20870947) UniProt PMID:20870947 MGI:4839685 NCBI chrNW_004955404:618,092...639,424
Ensembl chrNW_004955404:618,092...639,704 		JBrowse link
G Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma acts_upstream_of_or_within ISO (PMID:16129705) MGI PMID:16129705 NCBI chrNW_004955409:25,920,973...25,943,985 JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:33951726) UniProt PMID:33951726 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:10979977) MGI PMID:10979977 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:10979977) MGI PMID:10979977 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 ISO (PMID:18369315)
(PMID:7477353)
(PMID:7477352)		 CACAO
MGI		 PMID:7477352 PMID:7477353 PMID:18369315 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
positive regulation of B cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:14607964) MGI PMID:14607964 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Atad5 ATPase family AAA domain containing 5 acts_upstream_of_or_within ISO (PMID:25404367) MGI PMID:25404367 NCBI chrNW_004955481:6,986,128...7,031,113
Ensembl chrNW_004955481:6,986,502...7,030,742 		JBrowse link
G Bcl2 BCL2 apoptosis regulator involved_in ISO (PMID:17875758) UniProt PMID:17875758 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:9171827) MGI PMID:9171827 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in ISO (MGI:3615850|PMID:15964995) HGNC-UCL PMID:15964995 MGI:3615850 NCBI chrNW_004955429:6,548,586...6,553,730
Ensembl chrNW_004955429:6,547,731...6,558,105 		JBrowse link
G Btk Bruton tyrosine kinase ISO RGD PMID:28352114 RGD:151665126 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120 		JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cd320 CD320 molecule involved_in ISO (PMID:10727470) UniProt PMID:10727470 NCBI chrNW_004955563:1,084,523...1,089,395
Ensembl chrNW_004955563:1,084,474...1,093,111 		JBrowse link
G Cd38 CD38 molecule involved_in
acts_upstream_of_or_within		 ISO (PMID:17875758)
(PMID:8666928)		 UniProt
MGI		 PMID:8666928 PMID:17875758 NCBI chrNW_004955480:8,177,178...8,218,483
Ensembl chrNW_004955480:8,178,473...8,217,643 		JBrowse link
G Cd40 CD40 molecule acts_upstream_of_or_within ISO (PMID:10979977), (PMID:11894097), (PMID:14607964), (PMID:8666928), (PMID:8920854)
(PMID:15963492)		 MGI PMID:8666928 PMID:8920854 PMID:10979977 PMID:11894097 PMID:14607964 More... NCBI chrNW_004955445:11,191,817...11,202,156
Ensembl chrNW_004955445:11,190,603...11,202,093 		JBrowse link
G Cd40lg CD40 ligand ISO RGD PMID:18384807 RGD:2313415 NCBI chrNW_004955489:8,465,571...8,477,714
Ensembl chrNW_004955489:8,465,164...8,477,746 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:12782713) BHF-UCL PMID:12782713 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Cd81 CD81 molecule involved_in ISO (PMID:10400713) AgBase PMID:10400713 NCBI chrNW_004955422:14,155,682...14,175,181
Ensembl chrNW_004955422:14,155,682...14,175,181 		JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (PMID:12970760) MGI PMID:12970760 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15963492) MGI PMID:15963492 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526 		JBrowse link
G Clcf1 cardiotrophin like cytokine factor 1 involved_in ISO (MGI:3777853|PMID:12023368) BHF-UCL PMID:12023368 MGI:3777853 NCBI chrNW_004955422:18,097,779...18,108,628
Ensembl chrNW_004955422:18,097,779...18,108,628 		JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (PMID:24803541) ARUK-UCL PMID:24803541 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445 		JBrowse link
G Gpr183 G protein-coupled receptor 183 involved_in ISO (PMID:21673108)
(MGI:5430842|PMID:21673108)		 UniProt PMID:21673108 MGI:5430842 NCBI chrNW_004955404:11,264,954...11,277,531
Ensembl chrNW_004955404:11,264,954...11,277,531 		JBrowse link
G Il13 interleukin 13 ISO requires CD40 antigen RGD PMID:10331006 PMID:11573960 RGD:61509 RGD:633067 NCBI chrNW_004955408:4,046,406...4,049,795 JBrowse link
G Il13ra1 interleukin 13 receptor subunit alpha 1 ISO requires CD40 antigen RGD PMID:11573960 RGD:633067 NCBI chrNW_004955534:1,157,758...1,205,158
Ensembl chrNW_004955534:1,160,340...1,204,911 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:9184696) MGI PMID:9184696 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il21 interleukin 21 acts_upstream_of_or_within ISO (PMID:17673207) MGI PMID:17673207 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:10979977), (PMID:14607964) MGI PMID:10979977 PMID:14607964 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il5 interleukin 5 ISO RGD PMID:10529595 RGD:2303750 NCBI chrNW_004955408:3,937,128...3,951,784
Ensembl chrNW_004955408:3,937,894...3,939,358 		JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:12970760)
(PMID:7671324)		 MGI PMID:7671324 PMID:12970760 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO (MGI:4456946|PMID:15572028) BHF-UCL PMID:15572028 MGI:4456946 NCBI chrNW_004955404:2,531,484...2,555,383
Ensembl chrNW_004955404:2,531,484...2,555,689 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3829850|PMID:18955699) UniProt PMID:18955699 MGI:3829850 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434 		JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:12782713) BHF-UCL PMID:12782713 NCBI chrNW_004955455:8,367,566...8,368,460
Ensembl chrNW_004955455:8,367,566...8,368,460 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:17875758) UniProt PMID:17875758 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Nfatc2 nuclear factor of activated T cells 2 involved_in ISO (PMID:17875758) UniProt PMID:17875758 NCBI chrNW_004955445:7,035,876...7,153,199
Ensembl chrNW_004955445:7,035,876...7,153,237 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004955424:20,212,077...20,263,761
Ensembl chrNW_004955424:20,211,600...20,263,761 		JBrowse link
G Prlr prolactin receptor ISO RGD PMID:8650199 PMID:9447986 RGD:151665811 RGD:151667430 NCBI chrNW_004955426:20,161,406...20,326,688
Ensembl chrNW_004955426:20,168,830...20,326,840 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within		 ISO (PMID:1793833)
(PMID:8666928)
(PMID:8566034), (PMID:9015183), (PMID:9254656)		 UniProt
MGI		 PMID:1793833 PMID:8566034 PMID:8666928 PMID:9015183 PMID:9254656 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
G Slc39a10 solute carrier family 39 member 10 acts_upstream_of_or_within ISO (PMID:25074919) MGI PMID:25074919 NCBI chrNW_004955403:4,426,538...4,479,693 JBrowse link
G Tcf3 transcription factor 3 involved_in ISO (PMID:11509675) UniProt PMID:11509675 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tfrc transferrin receptor involved_in ISO (PMID:26642240)
(MGI:5775517|PMID:26642240)		 UniProt PMID:26642240 MGI:5775517 NCBI chrNW_004955420:12,348,392...12,372,714
Ensembl chrNW_004955420:12,348,821...12,372,691 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12855817) MGI PMID:12855817 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (MGI:3531416|PMID:12447442) BHF-UCL PMID:12447442 MGI:3531416 NCBI chrNW_004955412:27,303,548...27,315,031
Ensembl chrNW_004955412:27,312,489...27,315,031 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within ISO (PMID:10549626) MGI PMID:10549626 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Tlr9 toll like receptor 9 involved_in ISO (PMID:23857366) UniProt PMID:23857366 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of_or_within ISO (PMID:15240667) MGI PMID:15240667 NCBI chrNW_004955413:27,341,977...27,344,009 JBrowse link
G Tnfrsf4 TNF receptor superfamily member 4 involved_in ISO (MGI:74350|PMID:7749983) BHF-UCL PMID:7749983 MGI:74350 NCBI chrNW_004955486:9,565,424...9,569,836
Ensembl chrNW_004955486:9,567,220...9,569,676 		JBrowse link
G Tnfsf13b TNF superfamily member 13b involved_in
acts_upstream_of_or_within		 ISO (PMID:17499850)
(PMID:15240667)		 AgBase
MGI		 PMID:15240667 PMID:17499850 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
G Vav3 vav guanine nucleotide exchange factor 3 involved_in ISO (PMID:17875758) UniProt PMID:17875758 NCBI chrNW_004955435:11,326,910...11,599,043
Ensembl chrNW_004955435:11,326,910...11,599,043 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (PMID:10933391) MGI PMID:10933391 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541 		JBrowse link
positive regulation of CD4-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:16818763) UniProt PMID:16818763 NCBI chrNW_004955406:42,773,368...42,796,205 JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:15265931) UniProt PMID:15265931 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802 		JBrowse link
positive regulation of CD4-positive, alpha-beta T cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4819294|PMID:20639485) BHF-UCL PMID:20639485 MGI:4819294 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd83 CD83 molecule acts_upstream_of_or_within ISO (PMID:15322158) MGI PMID:15322158 NCBI chrNW_004955465:676,006...692,770
Ensembl chrNW_004955465:674,168...693,353 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:17028180) MGI PMID:17028180 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (MGI:3818191|PMID:19015308) UniProt PMID:19015308 MGI:3818191 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (MGI:6140589|PMID:24880459) UniProt PMID:24880459 MGI:6140589 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4819294|PMID:20639485) BHF-UCL PMID:20639485 MGI:4819294 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:6140589|PMID:24880459) UniProt PMID:24880459 MGI:6140589 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
positive regulation of CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:15314074)
(PMID:8125140)		 MGI PMID:8125140 PMID:15314074 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (PMID:14973438), (PMID:8125140), (PMID:9368605)
(PMID:9368605)		 MGI PMID:8125140 PMID:9368605 PMID:14973438 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (PMID:11894097), (PMID:14973438), (PMID:8125140) MGI PMID:8125140 PMID:11894097 PMID:14973438 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:16818763) UniProt PMID:16818763 NCBI chrNW_004955406:42,773,368...42,796,205 JBrowse link
G Cd81 CD81 molecule involved_in ISO (PMID:22307619) UniProt PMID:22307619 NCBI chrNW_004955422:14,155,682...14,175,181
Ensembl chrNW_004955422:14,155,682...14,175,181 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (MGI:3822251|PMID:18806793) UniProt PMID:18806793 MGI:3822251 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Prkcq protein kinase C theta acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894097)
(PMID:11894098)		 MGI PMID:11894097 PMID:11894098 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (PMID:17164348) BHF-UCL PMID:17164348 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837 		JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (MGI:5009207|PMID:9973465) BHF-UCL PMID:9973465 MGI:5009207 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384)
(PMID:12612578)
(PMID:16301745), (PMID:18573908)		 MGI PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Klhl25 kelch like family member 25 involved_in ISO (PMID:34491895)
(MGI:6765767|PMID:34491895)		 UniProt PMID:34491895 MGI:6765767 NCBI chrNW_004955416:18,965,966...18,991,099 JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:28467828) UniProt PMID:28467828 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802 		JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma involved_in ISO (PMID:20209097) UniProt PMID:20209097 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:20209097) UniProt PMID:20209097 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
positive regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta involved_in ISO (MGI:3772948|PMID:18258917) UniProt PMID:18258917 MGI:3772948 NCBI chrNW_004955484:9,503,286...9,557,066
Ensembl chrNW_004955484:9,503,227...9,557,066 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (MGI:3818191|PMID:19015308) UniProt PMID:19015308 MGI:3818191 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in ISO (MGI:3772948|PMID:18258917) UniProt PMID:18258917 MGI:3772948 NCBI chrNW_004955452:4,580,444...4,606,820
Ensembl chrNW_004955452:4,579,331...4,636,884 		JBrowse link
positive regulation of CD8-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd244 CD244 molecule involved_in ISO (MGI:5700312|PMID:11739483) UniProt PMID:11739483 MGI:5700312 NCBI chrNW_004955468:12,532,937...12,559,859
Ensembl chrNW_004955468:12,534,064...12,559,434 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (MGI:5562517|PMID:23871208) UniProt PMID:23871208 MGI:5562517 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:10887101) BHF-UCL PMID:10887101 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
positive regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in ISO (PMID:10209962) UniProt PMID:10209962 NCBI chrNW_004955422:19,360,641...19,370,623
Ensembl chrNW_004955422:19,360,641...19,371,105 		JBrowse link
G Tnfsf9 TNF superfamily member 9 ISO RGD PMID:19187795 RGD:2317344 NCBI chrNW_004955495:3,101,965...3,107,552 JBrowse link
positive regulation of establishment of T cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (MGI:6142789|PMID:22810897) UniProt PMID:22810897 MGI:6142789 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase involved_in ISO (MGI:6142789|PMID:22810897) UniProt PMID:22810897 MGI:6142789 NCBI chrNW_004955406:18,435,984...18,527,967
Ensembl chrNW_004955406:18,437,672...18,527,698 		JBrowse link
G Dock8 dedicator of cytokinesis 8 involved_in ISO (PMID:28028151)
(MGI:5824146|PMID:28028151)		 UniProt PMID:28028151 MGI:5824146 NCBI chrNW_004955434:4,849,147...5,050,545
Ensembl chrNW_004955434:4,867,016...5,049,118 		JBrowse link
G Flot2 flotillin 2 involved_in ISO (PMID:21696602) UniProt PMID:21696602 NCBI chrNW_004955481:4,276,847...4,298,523
Ensembl chrNW_004955481:4,276,860...4,298,523 		JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:7807014) MGI PMID:7807014 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (MGI:3818191|PMID:19015308) UniProt PMID:19015308 MGI:3818191 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:7807014) MGI PMID:7807014 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Sox13 SRY-box transcription factor 13 involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chrNW_004955406:39,959,458...39,994,214
Ensembl chrNW_004955406:39,966,055...39,994,214 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chrNW_004955483:5,076,664...5,077,059 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:8790395)
(PMID:7477352)		 MGI PMID:7477352 PMID:8790395 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955451:15,086,119...15,101,862
Ensembl chrNW_004955451:15,086,119...15,095,561 		JBrowse link
positive regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in ISO (MGI:3615850|PMID:15964995) HGNC-UCL PMID:15964995 MGI:3615850 NCBI chrNW_004955429:6,548,586...6,553,730
Ensembl chrNW_004955429:6,547,731...6,558,105 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16230479) MGI PMID:16230479 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:8590311 RGD:7401228 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3029054|PMID:14764698), (MGI:3847177|PMID:19273836) BHF-UCL PMID:14764698 PMID:19273836 MGI:3029054 MGI:3847177 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
positive regulation of immunological synapse formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955451:15,086,119...15,101,862
Ensembl chrNW_004955451:15,086,119...15,095,561 		JBrowse link
G Nedd9 neural precursor cell expressed, developmentally down-regulated 9 involved_in ISO (MGI:6838590|PMID:27359298) UniProt PMID:27359298 MGI:6838590 NCBI chrNW_004955465:3,101,409...3,281,481
Ensembl chrNW_004955465:3,129,707...3,282,632 		JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 acts_upstream_of_or_within ISO (PMID:21255825) MGI PMID:21255825 NCBI chrNW_004955419:28,683,896...28,692,006
Ensembl chrNW_004955419:28,683,896...28,693,395 		JBrowse link
G Exosc6 exosome component 6 acts_upstream_of_or_within ISO (PMID:21255825) MGI PMID:21255825 NCBI chrNW_004955484:3,088,133...3,089,551
Ensembl chrNW_004955484:3,088,624...3,089,472 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISO (MGI:6393148|PMID:31806351) UniProt PMID:31806351 MGI:6393148 NCBI chrNW_004955429:13,616,647...13,638,657
Ensembl chrNW_004955429:13,616,647...13,661,389 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO (MGI:6370097|PMID:28114273) UniProt PMID:28114273 MGI:6370097 NCBI chrNW_004955422:17,626,606...17,684,890
Ensembl chrNW_004955422:17,647,530...17,682,132 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO (MGI:6370097|PMID:28114273) UniProt PMID:28114273 MGI:6370097 NCBI chrNW_004955567:895,334...901,240
Ensembl chrNW_004955567:894,608...900,578 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004955486:2,191,903...2,197,193
Ensembl chrNW_004955486:2,191,903...2,198,538 		JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (MGI:4821506|PMID:20671152) UniProt PMID:20671152 MGI:4821506 NCBI chrNW_004955491:8,177,422...8,219,764
Ensembl chrNW_004955491:8,177,422...8,219,766 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (MGI:5468036|PMID:23306439), (MGI:5476381|PMID:23333305), (MGI:5490831|PMID:23333306) UniProt PMID:23306439 PMID:23333305 PMID:23333306 MGI:5468036 MGI:5476381 MGI:5490831 NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004955415:16,180,074...16,282,937
Ensembl chrNW_004955415:16,180,051...16,280,864 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004955510:6,021,477...6,114,745
Ensembl chrNW_004955510:6,075,510...6,114,898 		JBrowse link
G Tfrc transferrin receptor involved_in ISO (PMID:26642240) UniProt PMID:26642240 NCBI chrNW_004955420:12,348,392...12,372,714
Ensembl chrNW_004955420:12,348,821...12,372,691 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:23760478)
(MGI:3041657|PMID:15077110), (MGI:3046005|PMID:15159415)
(PMID:23345425)		 UniProt PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478 MGI:3041657 MGI:3046005 NCBI chrNW_004955416:9,962,736...10,035,433
Ensembl chrNW_004955416:9,962,897...10,035,278 		JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526 		JBrowse link
G Msh2 mutS homolog 2 involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO (PMID:23241889) MGI PMID:23241889 NCBI chrNW_004955514:1,084,522...1,162,624
Ensembl chrNW_004955514:1,069,085...1,162,624 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004955460:13,762,854...13,791,462 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:14988498) MGI PMID:14988498 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcf1 cardiotrophin like cytokine factor 1 involved_in ISO (MGI:3777853|PMID:12023368) BHF-UCL PMID:12023368 MGI:3777853 NCBI chrNW_004955422:18,097,779...18,108,628
Ensembl chrNW_004955422:18,097,779...18,108,628 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:14988498) MGI PMID:14988498 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within ISO (PMID:10490661) MGI PMID:10490661 NCBI chrNW_004955458:4,833,417...4,847,956
Ensembl chrNW_004955458:4,833,515...4,843,273 		JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 acts_upstream_of_or_within ISO (PMID:25404367) MGI PMID:25404367 NCBI chrNW_004955481:6,986,128...7,031,113
Ensembl chrNW_004955481:6,986,502...7,030,742 		JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (PMID:7688139) MGI PMID:7688139 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd40 CD40 molecule acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chrNW_004955445:11,191,817...11,202,156
Ensembl chrNW_004955445:11,190,603...11,202,093 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:1830926) MGI PMID:1830926 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:12882831), (PMID:14988498) MGI PMID:12882831 PMID:14988498 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Mlh1 mutL homolog 1 involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526 		JBrowse link
G Msh2 mutS homolog 2 involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698 		JBrowse link
G Pagr1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (MGI:5752090|PMID:26744420) UniProt PMID:26744420 MGI:5752090 NCBI chrNW_004955493:7,142,048...7,144,836
Ensembl chrNW_004955493:7,142,272...7,144,389 		JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (MGI:5752090|PMID:26744420) UniProt PMID:26744420 MGI:5752090 NCBI chrNW_004955491:8,177,422...8,219,764
Ensembl chrNW_004955491:8,177,422...8,219,766 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004955460:13,762,854...13,791,462 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:9015183) MGI PMID:9015183 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Tbx21 T-box transcription factor 21 acts_upstream_of_or_within ISO (PMID:12882831) MGI PMID:12882831 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
positive regulation of lymphocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
positive regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within ISO (PMID:9620849) MGI PMID:9620849 NCBI chrNW_004955453:2,938,659...3,037,211
Ensembl chrNW_004955453:2,938,659...3,037,211 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (MGI:3818191|PMID:19015308) UniProt PMID:19015308 MGI:3818191 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (MGI:6414739|PMID:32103174) UniProt PMID:32103174 MGI:6414739 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (MGI:6414739|PMID:32103174) UniProt PMID:32103174 MGI:6414739 NCBI chrNW_004955413:27,135,785...27,158,344
Ensembl chrNW_004955413:27,135,805...27,159,750 		JBrowse link
positive regulation of lymphocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:18434589 PMID:21519331 RGD:151665814 RGD:151665824 NCBI chrNW_004955415:4,434,486...4,462,505
Ensembl chrNW_004955415:4,434,453...4,461,751 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO (PMID:19152659) UniProt PMID:19152659 NCBI chrNW_004955446:18,163,117...18,244,840
Ensembl chrNW_004955446:18,163,117...18,245,199 		JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:1674604), (PMID:2204066) UniProt PMID:1674604 PMID:2204066 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:1674604) UniProt PMID:1674604 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Mpl MPL proto-oncogene, thrombopoietin receptor ISO RGD PMID:10606160 RGD:10449003 NCBI chrNW_004955537:2,922,156...2,937,223
Ensembl chrNW_004955537:2,922,156...2,937,223 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within ISO (PMID:10607756) MGI PMID:10607756 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138 		JBrowse link
G Tac1 tachykinin precursor 1 ISO RGD PMID:18621988 RGD:2304262 NCBI chrNW_004955432:13,991,647...13,999,665
Ensembl chrNW_004955432:13,991,414...13,999,728 		JBrowse link
G Tacr1 tachykinin receptor 1 ISO RGD PMID:18621988 RGD:2304262 NCBI chrNW_004955424:10,614,340...10,761,872
Ensembl chrNW_004955424:10,614,340...10,761,872 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within ISO (PMID:10607756) MGI PMID:10607756 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Znf335 zinc finger protein 335 involved_in ISO (PMID:23178126) UniProt PMID:23178126 NCBI chrNW_004955445:11,334,742...11,354,584
Ensembl chrNW_004955445:11,335,908...11,354,300 		JBrowse link
positive regulation of memory T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyrib CYFIP related Rac1 interactor B involved_in ISO (MGI:5432330|PMID:22522492) UniProt PMID:22522492 MGI:5432330 NCBI chrNW_004955461:4,634,324...4,786,723
Ensembl chrNW_004955461:4,632,263...4,662,016 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chrNW_004955406:43,002,817...43,034,555 JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (MGI:3027369|PMID:14688363) BHF-UCL PMID:14688363 MGI:3027369 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:27591323) UniProt PMID:27591323 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in ISO (MGI:6119963|PMID:29230018) UniProt PMID:29230018 MGI:6119963 NCBI chrNW_004955445:1,909,012...1,914,032
Ensembl chrNW_004955445:1,908,946...1,915,002 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3806904|PMID:18713990) BHF-UCL PMID:18713990 MGI:3806904 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of natural killer cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 acts_upstream_of_or_within ISO (PMID:7089489) MGI PMID:7089489 NCBI chrNW_004955555:2,183,752...2,186,154
Ensembl chrNW_004955555:2,184,490...2,185,138 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:7089489) MGI PMID:7089489 NCBI chrNW_004955409:7,902,125...7,913,966
Ensembl chrNW_004955409:7,899,601...7,913,966 		JBrowse link
G Hps1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (PMID:7089489) MGI PMID:7089489 NCBI chrNW_004955507:4,408,428...4,433,219
Ensembl chrNW_004955507:4,409,035...4,429,348 		JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:1674604) UniProt PMID:1674604 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:1674604) UniProt PMID:1674604 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Lyst lysosomal trafficking regulator acts_upstream_of_or_within ISO (PMID:7089489) MGI PMID:7089489 NCBI chrNW_004955492:4,161,976...4,371,637
Ensembl chrNW_004955492:4,209,749...4,369,762 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (MGI:5302428|PMID:21957144) CACAO PMID:21957144 MGI:5302428 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:21059856) MGI PMID:21059856 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (MGI:1276991|PMID:9647200) UniProt PMID:9647200 MGI:1276991 NCBI chrNW_004955468:2,673,657...2,677,633
Ensembl chrNW_004955468:2,673,980...2,677,321 		JBrowse link
positive regulation of natural killer cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO (PMID:23632890) UniProt PMID:23632890 NCBI chrNW_004955484:4,430,461...4,511,368
Ensembl chrNW_004955484:4,430,461...4,510,497 		JBrowse link
G Cd160 CD160 molecule involved_in ISO (PMID:19109136) UniProt PMID:19109136 NCBI chrNW_004955568:365,700...372,149 JBrowse link
G Lamp1 lysosomal associated membrane protein 1 involved_in ISO (PMID:23632890) UniProt PMID:23632890 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379 		JBrowse link
positive regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase involved_in ISO (PMID:18840707) UniProt PMID:18840707 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955559:1,364,056...1,371,245
Ensembl chrNW_004955559:1,365,938...1,370,002 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:18840707) UniProt PMID:18840707 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809 		JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:14607906)
(PMID:17318811)		 MGI PMID:14607906 PMID:17318811 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Il15ra interleukin 15 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955421:22,590,168...22,612,835
Ensembl chrNW_004955421:22,586,012...22,620,788 		JBrowse link
G Il21 interleukin 21 acts_upstream_of_or_within ISO (PMID:14764669) MGI PMID:14764669 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (MGI:5302428|PMID:21957144) CACAO PMID:21957144 MGI:5302428 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:9841920) MGI PMID:9841920 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:9841920) MGI PMID:9841920 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Tox thymocyte selection associated high mobility group box acts_upstream_of_or_within ISO (PMID:20818394) MGI PMID:20818394 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (MGI:5446979|PMID:22753936) UniProt PMID:22753936 MGI:5446979 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
positive regulation of natural killer cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd244 CD244 molecule involved_in ISO (MGI:3773416|PMID:15905190) UniProt PMID:15905190 MGI:3773416 NCBI chrNW_004955468:12,532,937...12,559,859
Ensembl chrNW_004955468:12,534,064...12,559,434 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand ISO RGD PMID:16528542 RGD:11049499 NCBI chrNW_004955559:1,364,056...1,371,245
Ensembl chrNW_004955559:1,365,938...1,370,002 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Il18 interleukin 18 involved_in ISO (PMID:19088061) BHF-UCL PMID:19088061 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:19088061) BHF-UCL PMID:19088061 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:9841920) MGI PMID:9841920 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Tyk2 tyrosine kinase 2 involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004955495:1,618,099...1,637,996
Ensembl chrNW_004955495:1,617,999...1,636,068 		JBrowse link
positive regulation of NK T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il12a interleukin 12A involved_in ISO (PMID:19088061) BHF-UCL PMID:19088061 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:19088061) BHF-UCL PMID:19088061 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:19088061) BHF-UCL PMID:19088061 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
positive regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO (PMID:14557411) MGI PMID:14557411 NCBI chrNW_004955425:22,792,616...23,051,509
Ensembl chrNW_004955425:22,792,616...23,051,737 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO (PMID:14557411) MGI PMID:14557411 NCBI chrNW_004955495:5,972,177...6,012,525
Ensembl chrNW_004955495:5,972,433...6,012,433 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:16973387) MGI PMID:16973387 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISO (MGI:3807724|PMID:18660811) UniProt PMID:18660811 MGI:3807724 NCBI chrNW_004955412:15,668,332...15,845,384
Ensembl chrNW_004955412:15,668,332...15,845,372 		JBrowse link
positive regulation of NK T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il12b interleukin 12B involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il18 interleukin 18 involved_in ISO (PMID:19088061) BHF-UCL PMID:19088061 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208 		JBrowse link
G Rasal3 RAS protein activator like 3 involved_in ISO (PMID:25652366) UniProt PMID:25652366 NCBI chrNW_004955495:7,795,619...7,808,674
Ensembl chrNW_004955495:7,795,842...7,808,511 		JBrowse link
G Tyk2 tyrosine kinase 2 involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004955495:1,618,099...1,637,996
Ensembl chrNW_004955495:1,617,999...1,636,068 		JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 acts_upstream_of ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
positive regulation of pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (MGI:5446979|PMID:22753936) UniProt PMID:22753936 MGI:5446979 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
positive regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30513302)
(MGI:6284097|PMID:30513302)		 UniProt PMID:30513302 MGI:6284097 NCBI chrNW_004955422:1,455,392...1,644,368
Ensembl chrNW_004955422:1,455,380...1,644,452 		JBrowse link
G Bcl6 BCL6 transcription repressor involved_in ISO (PMID:20935202), (PMID:22387553) BHF-UCL PMID:20935202 PMID:22387553 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004955484:9,025,409...9,037,942
Ensembl chrNW_004955484:9,025,460...9,037,580 		JBrowse link
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chrNW_004955406:43,002,817...43,034,555 JBrowse link
G Dusp10 dual specificity phosphatase 10 involved_in ISO (PMID:22387553) BHF-UCL PMID:22387553 NCBI chrNW_004955520:2,338,548...2,371,591
Ensembl chrNW_004955520:2,339,521...2,372,400 		JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (PMID:30513302) UniProt PMID:30513302 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:30513302)
(PMID:12522256), (PMID:15100250), (PMID:16769892), (PMID:17028180)
(PMID:15780990)		 UniProt
MGI		 PMID:12522256 PMID:15100250 PMID:15780990 PMID:16769892 PMID:17028180 More... NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il2 interleukin 2 ISO RGD PMID:6233372 RGD:1600097 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:25778793) UniProt PMID:25778793 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:24835996)
(MGI:5576410|PMID:24835996)		 UniProt PMID:24835996 MGI:5576410 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (PMID:22387553) BHF-UCL PMID:22387553 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109 		JBrowse link
G Sox12 SRY-box transcription factor 12 involved_in ISO (MGI:6203502|PMID:30190287) UniProt PMID:30190287 MGI:6203502 NCBI chrNW_004955597:225,796...229,350 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
positive regulation of T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:10845921), (PMID:11435465) MGI PMID:10845921 PMID:11435465 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor acts_upstream_of_or_within ISO (PMID:14614861) MGI PMID:14614861 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050 		JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Ccdc88b coiled-coil domain containing 88B involved_in ISO (MGI:5763360|PMID:25403443) UniProt PMID:25403443 MGI:5763360 NCBI chrNW_004955422:20,738,202...20,751,016
Ensembl chrNW_004955422:20,738,645...20,750,945 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISO (MGI:3699670|PMID:14662900) BHF-UCL PMID:14662900 MGI:3699670 NCBI chrNW_004955420:25,641,184...25,664,413 JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (PMID:12874832) MGI PMID:12874832 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cd4 CD4 molecule acts_upstream_of_or_within ISO (PMID:12421911) MGI PMID:12421911 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
G Cd47 CD47 molecule involved_in ISO (PMID:15383453) UniProt PMID:15383453 NCBI chrNW_004955427:8,704,519...8,740,962 JBrowse link
G Coro1a coronin 1A acts_upstream_of_or_within ISO (PMID:18199416) MGI PMID:18199416 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in ISO (MGI:5432330|PMID:22522492) UniProt PMID:22522492 MGI:5432330 NCBI chrNW_004955461:4,634,324...4,786,723
Ensembl chrNW_004955461:4,632,263...4,662,016 		JBrowse link
G Fbxo38 F-box protein 38 involved_in ISO (PMID:30487606) UniProt PMID:30487606 NCBI chrNW_004955415:5,841,269...5,888,830
Ensembl chrNW_004955415:5,841,038...5,889,110 		JBrowse link
G Fcho1 FCH and mu domain containing endocytic adaptor 1 involved_in ISO (PMID:32098969) UniProt PMID:32098969 NCBI chrNW_004955524:3,451,204...3,470,163
Ensembl chrNW_004955524:3,450,529...3,465,848 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103), (PMID:17164250)
(MGI:3708392|PMID:17164250)		 BHF-UCL PMID:16148103 PMID:17164250 MGI:3708392 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:8943371) UniProt PMID:8943371 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G LOC102025724 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in ISO (PMID:20356827) UniProt PMID:20356827 NCBI chrNW_004955437:1,644,037...1,657,094
Ensembl chrNW_004955437:1,643,238...1,651,071 		JBrowse link
G LOC102026469 HLA class II histocompatibility antigen, DP beta 1 chain involved_in ISO (PMID:20356827) UniProt PMID:20356827 NCBI chrNW_004955437:1,655,092...1,666,552
Ensembl chrNW_004955437:1,635,538...1,669,042 		JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:14614861) MGI PMID:14614861 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
G Prkcq protein kinase C theta involved_in
acts_upstream_of_or_within		 ISO (MGI:2663371|PMID:12782715)
(PMID:12867038)		 UniProt
MGI		 PMID:12782715 PMID:12867038 MGI:2663371 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699 		JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO PMID:7722293 UniProt PMID:7722293 RGD:8553490 NCBI chrNW_004955412:20,480,284...20,484,958
Ensembl chrNW_004955412:20,480,284...20,484,958 		JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in ISO (PMID:9367155) BHF-UCL PMID:9367155 NCBI chrNW_004955518:431,401...462,063
Ensembl chrNW_004955518:430,642...462,705 		JBrowse link
positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule involved_in ISO (PMID:8766544)
(MGI:1926561|PMID:11046035)		 UniProt PMID:8766544 PMID:11046035 MGI:1926561 NCBI chrNW_004955422:14,155,682...14,175,181
Ensembl chrNW_004955422:14,155,682...14,175,181 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G LOC102023521 HLA class II histocompatibility antigen, DM beta chain involved_in ISO (PMID:8139689) UniProt PMID:8139689 NCBI chrNW_004955437:1,544,906...1,551,412
Ensembl chrNW_004955437:1,541,491...1,551,159 		JBrowse link
positive regulation of T cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955451:15,086,119...15,101,862
Ensembl chrNW_004955451:15,086,119...15,095,561 		JBrowse link
G Ephb4 EPH receptor B4 acts_upstream_of_or_within ISO (PMID:15599401) MGI PMID:15599401 NCBI chrNW_004955573:132,328...150,879
Ensembl chrNW_004955573:132,328...152,595 		JBrowse link
G Ephb6 EPH receptor B6 acts_upstream_of_or_within ISO (PMID:15599401) MGI PMID:15599401 NCBI chrNW_004955494:812,482...820,679
Ensembl chrNW_004955494:812,855...820,475 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4819294|PMID:20639485) BHF-UCL PMID:20639485 MGI:4819294 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7731963)
(PMID:9478961)		 MGI PMID:7731963 PMID:9478961 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (PMID:12431371) MGI PMID:12431371 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (PMID:9432982)
(PMID:7679955), (PMID:8598040)		 MGI PMID:7679955 PMID:8598040 PMID:9432982 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (PMID:16501569) MGI PMID:16501569 NCBI chrNW_004955433:8,788,867...8,845,925
Ensembl chrNW_004955433:8,788,655...8,845,925 		JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO (MGI:5285154|PMID:20696860) UniProt PMID:20696860 MGI:5285154 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (PMID:22968459) MGI PMID:22968459 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il1rl2 interleukin 1 receptor like 2 acts_upstream_of_or_within ISO (PMID:22968459) MGI PMID:22968459 NCBI chrNW_004955470:7,703,369...7,742,058
Ensembl chrNW_004955470:7,704,134...7,742,064 		JBrowse link
G Il2 interleukin 2 ISO RGD PMID:9352365 RGD:1600138 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha ISO RGD PMID:9352365 RGD:1600138 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:12431371) MGI PMID:12431371 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G LOC102023843 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8638109)
(PMID:8598041), (PMID:9432982)
(PMID:8598040)		 MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chrNW_004955437:1,558,806...1,562,294
Ensembl chrNW_004955437:1,558,911...1,562,162 		JBrowse link
G Mdk midkine involved_in ISO (MGI:5897914|PMID:28183532) UniProt PMID:28183532 MGI:5897914 NCBI chrNW_004955422:1,655,351...1,657,026
Ensembl chrNW_004955422:1,655,358...1,657,044 		JBrowse link
G Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 involved_in ISO (MGI:3641361|PMID:12707323) CACAO PMID:12707323 MGI:3641361 NCBI chrNW_004955467:8,104,242...8,157,637
Ensembl chrNW_004955467:8,104,906...8,157,144 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:8666928) MGI PMID:8666928 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Rag1 recombination activating 1 involved_in ISO (MGI:50458|PMID:1547488) CACAO PMID:1547488 MGI:50458 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rhoh ras homolog family member H involved_in ISO (PMID:22850876) UniProt PMID:22850876 NCBI chrNW_004955443:7,227,751...7,269,984
Ensembl chrNW_004955443:7,227,751...7,264,821 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (PMID:19723499) MGI PMID:19723499 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:7630421)
(PMID:9208839)		 MGI PMID:7630421 PMID:9208839 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (MGI:5300225|PMID:22201126) UniProt PMID:22201126 MGI:5300225 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
G Zmiz1 zinc finger MIZ-type containing 1 involved_in ISO (MGI:5790022|PMID:26522984) UniProt PMID:26522984 MGI:5790022 NCBI chrNW_004955437:13,338,077...13,534,283
Ensembl chrNW_004955437:13,337,825...13,494,889 		JBrowse link
positive regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:11067867), (PMID:16670300)
(PMID:11435465)
(PMID:11067867), (PMID:12163459), (PMID:16670300)		 MGI PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (MGI:4836302|PMID:20856819) BHF-UCL PMID:20856819 MGI:4836302 NCBI chrNW_004955477:10,894,288...10,906,961
Ensembl chrNW_004955477:10,895,446...10,907,215 		JBrowse link
G Egr3 early growth response 3 acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chrNW_004955403:46,105,447...46,108,149
Ensembl chrNW_004955403:46,105,447...46,108,149 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:3836494|PMID:19109233) BHF-UCL PMID:19109233 MGI:3836494 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO (PMID:9916699)
(PMID:9252128)		 MGI PMID:9252128 PMID:9916699 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO (PMID:9215626) MGI PMID:9215626 NCBI chrNW_004955426:20,785,896...20,818,512
Ensembl chrNW_004955426:20,787,471...20,818,577 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (MGI:1891792|PMID:11017103) CACAO PMID:11017103 MGI:1891792 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3836494|PMID:19109233) BHF-UCL PMID:19109233 MGI:3836494 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 involved_in ISO (MGI:5432321|PMID:22561606) UniProt PMID:22561606 MGI:5432321 NCBI chrNW_004955458:2,084,931...2,108,328
Ensembl chrNW_004955458:2,084,868...2,108,335 		JBrowse link
G Vnn1 vanin 1 involved_in ISO (MGI:84472|PMID:8934567) BHF-UCL PMID:8934567 MGI:84472 NCBI chrNW_004955436:13,238,307...13,266,800
Ensembl chrNW_004955436:13,238,603...13,259,577 		JBrowse link
positive regulation of T cell homeostatic proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:15477346) MGI PMID:15477346 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
positive regulation of T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO decreased expression of mRNA under high glucose in the absence of insulin RGD PMID:16827901 RGD:2313341 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079 		JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISO (PMID:16049345) UniProt PMID:16049345 NCBI chrNW_004955437:157,509...158,919 JBrowse link
G Anxa1 annexin A1 involved_in ISO (PMID:17008549) UniProt PMID:17008549 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Btnl2 butyrophilin like 2 acts_upstream_of_or_within ISO (PMID:16751379) MGI PMID:16751379 NCBI chrNW_004955437:1,084,330...1,101,751
Ensembl chrNW_004955437:1,083,745...1,101,730 		JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004955484:9,025,409...9,037,942
Ensembl chrNW_004955484:9,025,460...9,037,580 		JBrowse link
G Ccdc88b coiled-coil domain containing 88B involved_in ISO (MGI:5763360|PMID:25403443) UniProt PMID:25403443 MGI:5763360 NCBI chrNW_004955422:20,738,202...20,751,016
Ensembl chrNW_004955422:20,738,645...20,750,945 		JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:18832695) BHF-UCL PMID:18832695 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143 		JBrowse link
G Cd274 CD274 molecule ISO RGD PMID:21717117 RGD:9589064 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Cd276 CD276 molecule involved_in
acts_upstream_of_or_within		 ISO (PMID:11224528)
(PMID:16751379)		 HGNC-UCL
MGI		 PMID:11224528 PMID:16751379 NCBI chrNW_004955450:3,884,437...3,896,416 JBrowse link
G Cd28 CD28 molecule involved_in
acts_upstream_of_or_within		 ISO (PMID:3159820), (PMID:8617933)
(PMID:10791997), (PMID:7688139)
(PMID:12867038), (PMID:12925852), (PMID:15240667)		 UniProt
MGI		 PMID:3159820 PMID:7688139 PMID:8617933 PMID:10791997 PMID:12867038 More... NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within
involved_in		 ISO (PMID:10072077), (PMID:10485657), (PMID:12874832), (PMID:15368291)
(PMID:12110186)		 RGD
MGI
UniProt		 PMID:10072077 PMID:10485657 PMID:10498748 PMID:12110186 PMID:12874832 More... RGD:1600792 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cd4 CD4 molecule ISO RGD PMID:15000837 RGD:10058971 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
G Cd40lg CD40 ligand involved_in ISO (PMID:8617933) UniProt PMID:8617933 NCBI chrNW_004955489:8,465,571...8,477,714
Ensembl chrNW_004955489:8,465,164...8,477,746 		JBrowse link
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chrNW_004955406:43,002,817...43,034,555 JBrowse link
G Cd59 CD59 molecule (CD59 blood group) ISO RGD PMID:8621904 RGD:1600498 NCBI chrNW_004955422:12,500,572...12,528,738 JBrowse link
G Cd6 CD6 molecule involved_in ISO (PMID:15294938) UniProt PMID:15294938 NCBI chrNW_004955511:5,592,176...5,617,421 JBrowse link
G Cd80 CD80 molecule acts_upstream_of_or_within ISO (PMID:23793062) RGD
MGI		 PMID:9237108 PMID:23793062 RGD:632472 NCBI chrNW_004955427:19,237,251...19,274,001
Ensembl chrNW_004955427:19,236,445...19,261,517 		JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within ISO (PMID:23793062) RGD
MGI		 PMID:19107191 PMID:23793062 RGD:4892215 NCBI chrNW_004955427:21,375,820...21,436,767
Ensembl chrNW_004955427:21,375,794...21,435,874 		JBrowse link
G Coro1a coronin 1A acts_upstream_of_or_within ISO (PMID:18199416) MGI PMID:18199416 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Dhps deoxyhypusine synthase acts_upstream_of_or_within ISO (PMID:24196968) MGI PMID:24196968 NCBI chrNW_004955415:31,778,632...31,782,782
Ensembl chrNW_004955415:31,778,632...31,782,782 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within ISO (PMID:15879105) MGI PMID:15879105 NCBI chrNW_004955442:12,971,031...13,002,605
Ensembl chrNW_004955442:12,967,438...13,010,943 		JBrowse link
G Efnb1 ephrin B1 acts_upstream_of_or_within ISO (PMID:15502157) MGI PMID:15502157 NCBI chrNW_004955475:8,360,504...8,372,431
Ensembl chrNW_004955475:8,360,465...8,373,578 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5568873|PMID:24567532) UniProt PMID:24567532 MGI:5568873 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:15870295) MGI PMID:15870295 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:16280321) MGI PMID:16280321 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (PMID:11057672) MGI PMID:11057672 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il12b interleukin 12B involved_in
acts_upstream_of_or_within		 ISO (PMID:12023369)
(PMID:11057672)		 BHF-UCL
MGI		 PMID:11057672 PMID:12023369 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:10704459) MGI PMID:10704459 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:1919436) BHF-UCL PMID:1919436 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:1588041)
(PMID:22968459)		 RGD
MGI		 PMID:1588041 PMID:6609839 PMID:6609879 PMID:6979751 PMID:22968459 RGD:1600093 RGD:2303493 RGD:2303494 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il21 interleukin 21 involved_in
acts_upstream_of_or_within		 ISO (PMID:15207081)
(PMID:17673207)		 UniProt
MGI		 PMID:15207081 PMID:17673207 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:12023369) BHF-UCL PMID:12023369 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha ISO RGD PMID:9352365 RGD:1600138 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:1588041), (PMID:18997793) MGI PMID:1588041 PMID:18997793 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:3130269) BHF-UCL PMID:3130269 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Il6st interleukin 6 cytokine family signal transducer involved_in ISO (PMID:14764690) BHF-UCL PMID:14764690 NCBI chrNW_004955446:11,790,636...11,837,734
Ensembl chrNW_004955446:11,790,444...11,835,001 		JBrowse link
G Itgal integrin subunit alpha L acts_upstream_of_or_within ISO (PMID:1346270) MGI PMID:1346270 NCBI chrNW_004955493:7,397,813...7,435,420
Ensembl chrNW_004955493:7,397,991...7,439,070 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (PMID:11114383)
(MGI:1927676|PMID:11114383)		 ComplexPortal PMID:11114383 MGI:1927676 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO PMID:9637481 BHF-UCL PMID:9637481 RGD:8554088 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Kitlg KIT ligand acts_upstream_of_or_within ISO (PMID:15947484) MGI PMID:15947484 NCBI chrNW_004955405:25,816,137...25,969,006
Ensembl chrNW_004955405:25,886,447...25,969,395 		JBrowse link
G Lep leptin involved_in ISO (PMID:25060689) UniProt PMID:25060689 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472 		JBrowse link
G LOC102023521 HLA class II histocompatibility antigen, DM beta chain involved_in ISO (PMID:8139689) UniProt PMID:8139689 NCBI chrNW_004955437:1,544,906...1,551,412
Ensembl chrNW_004955437:1,541,491...1,551,159 		JBrowse link
G LOC102025724 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in ISO (PMID:20356827) UniProt PMID:20356827 NCBI chrNW_004955437:1,644,037...1,657,094
Ensembl chrNW_004955437:1,643,238...1,651,071 		JBrowse link
G LOC102026469 HLA class II histocompatibility antigen, DP beta 1 chain involved_in ISO (PMID:20356827) UniProt PMID:20356827 NCBI chrNW_004955437:1,655,092...1,666,552
Ensembl chrNW_004955437:1,635,538...1,669,042 		JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:12110186) UniProt PMID:12110186 NCBI chrNW_004955501:1,867,956...1,963,091 JBrowse link
G Nck2 NCK adaptor protein 2 involved_in ISO (PMID:12110186) UniProt PMID:12110186 NCBI chrNW_004955470:10,487,962...10,593,046
Ensembl chrNW_004955470:10,487,481...10,593,046 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (MGI:3818191|PMID:19015308)
(PMID:32647003)		 UniProt PMID:19015308 PMID:32647003 MGI:3818191 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 acts_upstream_of_or_within ISO (PMID:11283156) MGI PMID:11283156 NCBI chrNW_004955434:9,540,047...9,559,335 JBrowse link
G Pnp purine nucleoside phosphorylase acts_upstream_of_or_within ISO (PMID:16964310) MGI PMID:16964310 NCBI chrNW_004955550:1,290,816...1,299,553
Ensembl chrNW_004955550:1,290,244...1,298,068 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in ISO (MGI:61371|PMID:8334701) UniProt PMID:8334701 MGI:61371 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
G Selenok selenoprotein K acts_upstream_of_or_within ISO (PMID:21220695) MGI PMID:21220695 NCBI chrNW_004955430:3,870,925...3,876,636 JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:12165075 RGD:10450475 NCBI chrNW_004955451:17,318,600...17,330,943
Ensembl chrNW_004955451:17,315,024...17,328,103 		JBrowse link
G Slc7a1 solute carrier family 7 member 1 acts_upstream_of ISO (PMID:26449889) ARUK-UCL PMID:26449889 NCBI chrNW_004955431:16,270,648...16,315,280
Ensembl chrNW_004955431:16,260,605...16,315,332 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:11380685), (PMID:7790813) MGI PMID:7790813 PMID:11380685 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Spta1 spectrin alpha, erythrocytic 1 acts_upstream_of_or_within ISO (PMID:7684329) MGI PMID:7684329 NCBI chrNW_004955468:10,472,601...10,545,402
Ensembl chrNW_004955468:10,472,671...10,545,313 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15947484) MGI PMID:15947484 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Tfrc transferrin receptor involved_in ISO (PMID:26642240)
(MGI:5775517|PMID:26642240)		 UniProt PMID:26642240 MGI:5775517 NCBI chrNW_004955420:12,348,392...12,372,714
Ensembl chrNW_004955420:12,348,821...12,372,691 		JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of_or_within ISO (PMID:15240667), (PMID:15368291) MGI PMID:15240667 PMID:15368291 NCBI chrNW_004955413:27,341,977...27,344,009 JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO (PMID:15240667), (PMID:15368291) MGI PMID:15240667 PMID:15368291 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (MGI:2181820|PMID:10421844) UniProt PMID:10421844 MGI:2181820 NCBI chrNW_004955422:9,925,765...9,950,354
Ensembl chrNW_004955422:9,932,680...9,949,100 		JBrowse link
G Tyk2 tyrosine kinase 2 involved_in ISO (PMID:11114383)
(MGI:1927676|PMID:11114383)		 ComplexPortal PMID:11114383 MGI:1927676 NCBI chrNW_004955495:1,618,099...1,637,996
Ensembl chrNW_004955495:1,617,999...1,636,068 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 involved_in ISO (PMID:1381355) BHF-UCL PMID:1381355 NCBI chrNW_004955435:5,390,745...5,410,025
Ensembl chrNW_004955435:5,390,751...5,411,691 		JBrowse link
G Vtcn1 V-set domain containing T cell activation inhibitor 1 acts_upstream_of_or_within ISO (PMID:16751379) MGI PMID:16751379 NCBI chrNW_004955435:20,250,236...20,332,329
Ensembl chrNW_004955435:20,256,954...20,332,330 		JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in ISO (MGI:4943411|PMID:15579591) UniProt PMID:15579591 MGI:4943411 NCBI chrNW_004955456:15,013,472...15,020,809 JBrowse link
G Zp4 zona pellucida glycoprotein 4 involved_in ISO (PMID:19004505) UniProt PMID:19004505 NCBI chrNW_004955492:2,599,579...2,606,837 JBrowse link
positive regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in ISO (PMID:17008549) UniProt PMID:17008549 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490 		JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894097) MGI PMID:11894097 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (MGI:3687909|PMID:12242343) UniProt PMID:12242343 MGI:3687909 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389 		JBrowse link
positive regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Malt1 MALT1 paracaspase involved_in ISO (MGI:6142401|PMID:25282160) UniProt PMID:25282160 MGI:6142401 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
G Nfkbid NFKB inhibitor delta involved_in ISO (MGI:6142401|PMID:25282160) UniProt PMID:25282160 MGI:6142401 NCBI chrNW_004955468:2,680,934...2,688,797
Ensembl chrNW_004955468:2,680,806...2,689,155 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (MGI:6142401|PMID:25282160) UniProt PMID:25282160 MGI:6142401 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (MGI:5689221|PMID:26098997) UniProt PMID:26098997 MGI:5689221 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410 		JBrowse link
positive regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd2 bromodomain containing 2 involved_in ISO (PMID:28262505)
(MGI:6106706|PMID:28262505)		 UniProt PMID:28262505 MGI:6106706 NCBI chrNW_004955437:1,584,890...1,592,486
Ensembl chrNW_004955437:1,584,479...1,592,826 		JBrowse link
G Brd4 bromodomain containing 4 involved_in ISO (MGI:6106706|PMID:28262505) UniProt PMID:28262505 MGI:6106706 NCBI chrNW_004955495:7,959,033...7,989,216
Ensembl chrNW_004955495:7,957,510...7,988,498 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:28262505) UniProt PMID:28262505 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (MGI:3851279|PMID:19501566) BHF-UCL PMID:19501566 MGI:3851279 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
positive regulation of T-helper 2 cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcq protein kinase C theta involved_in ISO (MGI:3587418|PMID:15263025) UniProt PMID:15263025 MGI:3587418 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il18 interleukin 18 involved_in ISO (MGI:3608083|PMID:12829194) BHF-UCL PMID:12829194 MGI:3608083 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955493:5,546,340...5,580,745
Ensembl chrNW_004955493:5,545,944...5,582,422 		JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (PMID:12594267) MGI PMID:12594267 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (MGI:5689221|PMID:26098997) UniProt PMID:26098997 MGI:5689221 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410 		JBrowse link
G Prkcz protein kinase C zeta involved_in ISO (MGI:3584076|PMID:15987782) UniProt PMID:15987782 MGI:3584076 NCBI chrNW_004955486:8,947,579...9,021,702
Ensembl chrNW_004955486:8,947,579...9,021,702 		JBrowse link
G Rara retinoic acid receptor alpha involved_in ISO (PMID:18416830) BHF-UCL PMID:18416830 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4943387|PMID:18354165) BHF-UCL PMID:18354165 MGI:4943387 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shb SH2 domain containing adaptor protein B acts_upstream_of_or_within ISO (PMID:24645804) MGI PMID:24645804 NCBI chrNW_004955419:28,423,354...28,555,948
Ensembl chrNW_004955419:28,421,354...28,558,823 		JBrowse link
positive T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:17998389) MGI PMID:17998389 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Themis thymocyte selection associated involved_in ISO (MGI:4352756|PMID:19597499), (MGI:4352757|PMID:19597498), (MGI:4352758|PMID:19597497), (MGI:4361774|PMID:19805304) UniProt PMID:19597497 PMID:19597498 PMID:19597499 PMID:19805304 MGI:4352756 MGI:4352757 MGI:4352758 MGI:4361774 NCBI chrNW_004955436:8,743,835...8,909,040 JBrowse link
positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd3d CD3d molecule involved_in ISO (MGI:87267|PMID:9135151) UniProt PMID:9135151 MGI:87267 NCBI chrNW_004955412:19,481,059...19,484,890
Ensembl chrNW_004955412:19,480,977...19,484,721 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (PMID:7679955), (PMID:8598040)
(PMID:9432982)		 MGI PMID:7679955 PMID:8598040 PMID:9432982 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (PMID:15064401) MGI PMID:15064401 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180 		JBrowse link
G LOC102023843 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598040)
(PMID:8598041), (PMID:9432982)
(PMID:8638109)		 MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chrNW_004955437:1,558,806...1,562,294
Ensembl chrNW_004955437:1,558,911...1,562,162 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 involved_in ISO (MGI:3820023|PMID:17579027) UniProt PMID:17579027 MGI:3820023 NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:8666928) MGI PMID:8666928 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3834308|PMID:17227833) BHF-UCL PMID:17227833 MGI:3834308 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:21098124) MGI PMID:21098124 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057 		JBrowse link
G Stk11 serine/threonine kinase 11 acts_upstream_of_or_within ISO (PMID:21487392) MGI PMID:21487392 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:7630421) MGI PMID:7630421 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
pre-B cell allelic exclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (MGI:3848557|PMID:19448632) UniProt PMID:19448632 MGI:3848557 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545 		JBrowse link
G Rag1 recombination activating 1 involved_in ISO (MGI:3848557|PMID:19448632) UniProt PMID:19448632 MGI:3848557 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rag2 recombination activating 2 involved_in ISO (MGI:3848557|PMID:19448632) UniProt PMID:19448632 MGI:3848557 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
pre-B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (MGI:5002406|PMID:21423173) UniProt PMID:21423173 MGI:5002406 NCBI chrNW_004955489:5,394,553...5,567,295
Ensembl chrNW_004955489:5,394,357...5,567,405 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:7795661), (PMID:9028339) MGI PMID:7795661 PMID:9028339 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chrNW_004955421:16,595,445...17,075,923
Ensembl chrNW_004955421:16,595,471...17,075,923 		JBrowse link
pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:7621074) MGI PMID:7621074 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:19934022) MGI PMID:19934022 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6508514|PMID:30171019) ARUK-UCL PMID:30171019 MGI:6508514 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
regulation of activated T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 molecule NOT|involved_in ISO (PMID:24187568), (PMID:25310899) UniProt PMID:24187568 PMID:25310899 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Icam1 intercellular adhesion molecule 1 NOT|involved_in ISO (PMID:25310899) UniProt PMID:25310899 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 NOT|involved_in ISO (PMID:25310899) UniProt PMID:25310899 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829 		JBrowse link
G Ripk3 receptor interacting serine/threonine kinase 3 involved_in ISO (MGI:5291865|PMID:21876153) UniProt PMID:21876153 MGI:5291865 NCBI chrNW_004955409:35,961,604...35,965,477
Ensembl chrNW_004955409:35,937,880...35,965,712 		JBrowse link
regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (MGI:5800654|PMID:27010503) UniProt PMID:27010503 MGI:5800654 NCBI chrNW_004955524:933,200...936,933 JBrowse link
regulation of B cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd19 CD19 molecule involved_in ISO (PMID:1373518) UniProt PMID:1373518 NCBI chrNW_004955493:6,540,160...6,544,077 JBrowse link
G Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma acts_upstream_of_or_within ISO (PMID:16129705) MGI PMID:16129705 NCBI chrNW_004955409:25,920,973...25,943,985 JBrowse link
G Themis2 thymocyte selection associated family member 2 involved_in ISO (MGI:5775861|PMID:24907343) UniProt PMID:24907343 MGI:5775861 NCBI chrNW_004955452:7,058,703...7,075,114
Ensembl chrNW_004955452:7,058,662...7,075,463 		JBrowse link
G Tlr9 toll like receptor 9 acts_upstream_of_or_within ISO (PMID:23109291) MGI PMID:23109291 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (MGI:5800654|PMID:27010503) UniProt PMID:27010503 MGI:5800654 NCBI chrNW_004955524:933,200...936,933 JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:7795661), (PMID:9028339) MGI PMID:7795661 PMID:9028339 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (PMID:16501569) MGI PMID:16501569 NCBI chrNW_004955433:8,788,867...8,845,925
Ensembl chrNW_004955433:8,788,655...8,845,925 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:6610701) MGI PMID:6610701 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (MGI:1307021|PMID:9806640) UniProt PMID:9806640 MGI:1307021 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 acts_upstream_of_or_within ISO (PMID:15143214) MGI PMID:15143214 NCBI chrNW_004955413:27,865,672...27,893,793
Ensembl chrNW_004955413:27,866,271...27,893,844 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of_or_within ISO (PMID:9254656) MGI PMID:9254656 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177 		JBrowse link
G Slamf8 SLAM family member 8 involved_in ISO (MGI:6215454|PMID:11313408) UniProt PMID:11313408 MGI:6215454 NCBI chrNW_004955468:11,623,092...11,632,566
Ensembl chrNW_004955468:11,623,197...11,632,573 		JBrowse link
G Tlr9 toll like receptor 9 involved_in ISO (PMID:23857366) UniProt PMID:23857366 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (MGI:5779430|PMID:27102483) UniProt PMID:27102483 MGI:5779430 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5779430|PMID:27102483) UniProt PMID:27102483 MGI:5779430 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
regulation of B cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:15681594) DFLAT PMID:15681594 NCBI chrNW_004955410:20,428,531...20,459,482
Ensembl chrNW_004955410:20,428,546...20,456,836 		JBrowse link
G Cd22 CD22 molecule involved_in ISO (MGI:4453395|PMID:20200274) ARUK-UCL PMID:20200274 MGI:4453395 NCBI chrNW_004955468:4,609,601...4,622,601
Ensembl chrNW_004955468:4,612,044...4,625,882 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (MGI:1307021|PMID:9806640) UniProt PMID:9806640 MGI:1307021 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Mzb1 marginal zone B and B1 cell specific protein involved_in ISO (MGI:4866969|PMID:21093319) UniProt PMID:21093319 MGI:4866969 NCBI chrNW_004955418:1,170,365...1,172,581
Ensembl chrNW_004955418:1,170,365...1,172,581 		JBrowse link
regulation of CD4-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in ISO (PMID:22473704) UniProt PMID:22473704 NCBI chrNW_004955437:645,482...648,607
Ensembl chrNW_004955437:645,897...648,479 		JBrowse link
regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sh3rf1 SH3 domain containing ring finger 1 involved_in ISO (MGI:6158776|PMID:27084103) UniProt PMID:27084103 MGI:6158776 NCBI chrNW_004955403:36,989,509...37,141,188
Ensembl chrNW_004955403:36,988,811...37,142,401 		JBrowse link
regulation of CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
regulation of CD8-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (MGI:4359960|PMID:19752223) UniProt PMID:19752223 MGI:4359960 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262 		JBrowse link
regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
regulation of CD8-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf1 interferon regulatory factor 1 involved_in ISO (MGI:5317515|PMID:21909274) UniProt PMID:21909274 MGI:5317515 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973 		JBrowse link
G Mapk8ip1 mitogen-activated protein kinase 8 interacting protein 1 involved_in ISO (MGI:5546548|PMID:23963642) UniProt PMID:23963642 MGI:5546548 NCBI chrNW_004955422:2,064,010...2,081,681
Ensembl chrNW_004955422:2,061,851...2,082,514 		JBrowse link
G Sh3rf1 SH3 domain containing ring finger 1 involved_in ISO (MGI:5546548|PMID:23963642) UniProt PMID:23963642 MGI:5546548 NCBI chrNW_004955403:36,989,509...37,141,188
Ensembl chrNW_004955403:36,988,811...37,142,401 		JBrowse link
regulation of establishment of T cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin involved_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361 		JBrowse link
regulation of extrathymic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm1 PR/SET domain 1 involved_in ISO (MGI:5779429|PMID:27102484) UniProt PMID:27102484 MGI:5779429 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056 		JBrowse link
G Znf683 zinc finger protein 683 involved_in ISO (MGI:5779429|PMID:27102484) UniProt PMID:27102484 MGI:5779429 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr3 early growth response 3 acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chrNW_004955403:46,105,447...46,108,149
Ensembl chrNW_004955403:46,105,447...46,108,149 		JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
G Sox13 SRY-box transcription factor 13 acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chrNW_004955406:39,959,458...39,994,214
Ensembl chrNW_004955406:39,966,055...39,994,214 		JBrowse link
G Tcf7 transcription factor 7 involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527 		JBrowse link
regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfrsf9 TNF receptor superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) MGI PMID:8405064 NCBI chrNW_004955486:4,986,245...5,009,437
Ensembl chrNW_004955486:4,989,582...5,010,213 		JBrowse link
G Tnfsf9 TNF superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) MGI PMID:8405064 NCBI chrNW_004955495:3,101,965...3,107,552 JBrowse link
regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor acts_upstream_of_or_within ISO (PMID:21211721) MGI PMID:21211721 NCBI chrNW_004955424:16,338,546...16,449,074
Ensembl chrNW_004955424:16,336,228...16,448,766 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO (MGI:5004983|PMID:21518874) UniProt PMID:21518874 MGI:5004983 NCBI chrNW_004955481:4,462,270...4,497,364
Ensembl chrNW_004955481:4,462,270...4,497,364 		JBrowse link
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384) MGI PMID:16275384 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il27ra interleukin 27 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:11057672) MGI PMID:11057672 NCBI chrNW_004955415:32,749,682...32,762,532
Ensembl chrNW_004955415:32,749,094...32,761,882 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (MGI:5649169|PMID:25310967) UniProt PMID:25310967 MGI:5649169 NCBI chrNW_004955482:2,327,137...2,343,980 JBrowse link
regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (MGI:87362|PMID:9155026) UniProt PMID:9155026 MGI:87362 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO (PMID:18495327) MGI PMID:18495327 NCBI chrNW_004955458:3,799,450...3,833,269
Ensembl chrNW_004955458:3,799,450...3,833,263 		JBrowse link
regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:15240675) MGI PMID:15240675 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
regulation of natural killer cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcaf15 DDB1 and CUL4 associated factor 15 involved_in ISO (PMID:31452512) UniProt PMID:31452512 NCBI chrNW_004955415:32,701,701...32,710,051
Ensembl chrNW_004955415:32,701,701...32,710,051 		JBrowse link
G Lep leptin involved_in ISO (PMID:12504075) UniProt PMID:12504075 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472 		JBrowse link
G Sh2d1b SH2 domain containing 1B acts_upstream_of_or_within ISO (PMID:19151721) MGI PMID:19151721 NCBI chrNW_004955462:13,909,266...13,934,239
Ensembl chrNW_004955462:13,909,258...13,931,526 		JBrowse link
G Slamf7 SLAM family member 7 acts_upstream_of_or_within ISO (PMID:19151721) MGI PMID:19151721 NCBI chrNW_004955468:12,440,157...12,457,445
Ensembl chrNW_004955468:12,439,841...12,458,000 		JBrowse link
regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals9 galectin 9 involved_in ISO (MGI:5491117|PMID:23408620) UniProt PMID:23408620 MGI:5491117 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Prdm1 PR/SET domain 1 involved_in ISO (MGI:5779429|PMID:27102484) UniProt PMID:27102484 MGI:5779429 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056 		JBrowse link
G Znf683 zinc finger protein 683 involved_in ISO (MGI:5779429|PMID:27102484) UniProt PMID:27102484 MGI:5779429 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Znf683 zinc finger protein 683 involved_in ISO (MGI:5437828|PMID:22885984) UniProt PMID:22885984 MGI:5437828 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
regulation of natural killer cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin involved_in ISO (PMID:12504075) UniProt PMID:12504075 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:20522204) BHF-UCL PMID:20522204 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm1 PR/SET domain 1 involved_in ISO (MGI:5779429|PMID:27102484) UniProt PMID:27102484 MGI:5779429 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056 		JBrowse link
G Znf683 zinc finger protein 683 involved_in ISO (MGI:5779429|PMID:27102484) UniProt PMID:27102484 MGI:5779429 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn1 forkhead box N1 involved_in ISO (MGI:5554515|PMID:24184560) UniProt PMID:24184560 MGI:5554515 NCBI chrNW_004955481:4,611,246...4,640,606
Ensembl chrNW_004955481:4,611,087...4,627,113 		JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:3773459|PMID:18195075) UniProt PMID:18195075 MGI:3773459 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (PMID:21245484) MGI PMID:21245484 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) MGI PMID:18725527 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Drosha drosha ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) MGI PMID:18725527 NCBI chrNW_004955426:17,387,595...17,505,126
Ensembl chrNW_004955426:17,387,534...17,502,294 		JBrowse link
G Fanca FA complementation group A acts_upstream_of_or_within ISO (PMID:24501220) MGI PMID:24501220 NCBI chrNW_004955541:3,272,936...3,320,229
Ensembl chrNW_004955541:3,273,022...3,320,052 		JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:24501220) MGI PMID:24501220 NCBI chrNW_004955561:1,460,080...1,538,026
Ensembl chrNW_004955561:1,464,869...1,538,045 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (MGI:5926326|PMID:28424240) UniProt PMID:28424240 MGI:5926326 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:21245484) MGI PMID:21245484 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Sh2b3 SH2B adaptor protein 3 ISO RGD PMID:25776069 RGD:13442483 NCBI chrNW_004955482:8,079,905...8,100,791
Ensembl chrNW_004955482:8,096,160...8,097,765 		JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:21245484) MGI PMID:21245484 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
regulation of T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10488085) BHF-UCL PMID:10488085 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143 		JBrowse link
G Cd4 CD4 molecule involved_in ISO (PMID:1533274) UniProt PMID:1533274 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
G Cgas cyclic GMP-AMP synthase acts_upstream_of_or_within ISO (PMID:26371324) MGI PMID:26371324 NCBI chrNW_004955493:8,593,104...8,607,297 JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (MGI:5581366|PMID:24687959) UniProt PMID:24687959 MGI:5581366 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262 		JBrowse link
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of_or_within ISO (PMID:19124723) MGI PMID:19124723 NCBI chrNW_004955501:1,826,687...1,863,261 JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (MGI:5926326|PMID:28424240) UniProt PMID:28424240 MGI:5926326 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574 		JBrowse link
G Lat linker for activation of T cells involved_in ISO (PMID:12646565) HGNC-UCL PMID:12646565 NCBI chrNW_004955493:6,501,504...6,506,089
Ensembl chrNW_004955493:6,499,311...6,507,543 		JBrowse link
G Pag1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 involved_in ISO (PMID:10790433) PINC PMID:10790433 NCBI chrNW_004955444:487,028...636,440
Ensembl chrNW_004955444:608,711...629,146 		JBrowse link
G Sit1 signaling threshold regulating transmembrane adaptor 1 involved_in ISO (PMID:10209036) UniProt PMID:10209036 NCBI chrNW_004955472:643,923...645,802 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:26371324) MGI PMID:26371324 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767 		JBrowse link
regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (MGI:5142352|PMID:21690296) UniProt PMID:21690296 MGI:5142352 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7670465) MGI PMID:7670465 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18228248) MGI PMID:18228248 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISO (MGI:5926947|PMID:28507030) UniProt PMID:28507030 MGI:5926947 NCBI chrNW_004955420:25,641,184...25,664,413 JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (MGI:5581366|PMID:24687959) UniProt PMID:24687959 MGI:5581366 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:6610701) MGI PMID:6610701 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:10704459) MGI PMID:10704459 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G LOC102023166 cytochrome P450 26B1 acts_upstream_of_or_within ISO (PMID:23991089) MGI PMID:23991089 NCBI chrNW_004955424:13,336,189...13,355,368
Ensembl chrNW_004955424:13,336,189...13,355,423 		JBrowse link
G LOC102025166 HLA class II histocompatibility antigen, DO alpha chain acts_upstream_of_or_within ISO (PMID:11069069) MGI PMID:11069069 NCBI chrNW_004955437:1,603,395...1,606,800
Ensembl chrNW_004955437:1,603,168...1,607,134 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:6094929|PMID:28792938) UniProt PMID:28792938 MGI:6094929 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Prelid1 PRELI domain containing 1 involved_in ISO (PMID:18945965) UniProt PMID:18945965 NCBI chrNW_004955408:29,551,253...29,554,778
Ensembl chrNW_004955408:29,551,424...29,554,436 		JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within ISO (PMID:18684012) MGI PMID:18684012 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Slc46a2 solute carrier family 46 member 2 acts_upstream_of_or_within ISO (PMID:18684012) MGI PMID:18684012 NCBI chrNW_004955419:14,547,393...14,557,447
Ensembl chrNW_004955419:14,547,103...14,557,531 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (MGI:5142352|PMID:21690296) UniProt PMID:21690296 MGI:5142352 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:3876160 RGD:152995412 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chrNW_004955528:1,753,450...1,759,886
Ensembl chrNW_004955528:1,753,450...1,759,886 		JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (MGI:5800654|PMID:27010503) UniProt PMID:27010503 MGI:5800654 NCBI chrNW_004955524:933,200...936,933 JBrowse link
G Clptm1 CLPTM1 regulator of GABA type A receptor forward trafficking involved_in ISO (MGI:1095293|PMID:9218588) BHF-UCL PMID:9218588 MGI:1095293 NCBI chrNW_004955555:2,029,591...2,056,321
Ensembl chrNW_004955555:2,029,546...2,058,497 		JBrowse link
G Foxn1 forkhead box N1 acts_upstream_of_or_within ISO (PMID:22072979) MGI PMID:22072979 NCBI chrNW_004955481:4,611,246...4,640,606
Ensembl chrNW_004955481:4,611,087...4,627,113 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:24043312) MGI PMID:24043312 NCBI chrNW_004955441:6,649,895...6,724,271
Ensembl chrNW_004955441:6,646,385...6,713,028 		JBrowse link
G Sos2 SOS Ras/Rho guanine nucleotide exchange factor 2 acts_upstream_of_or_within ISO (PMID:24043312) MGI PMID:24043312 NCBI chrNW_004955409:12,542,353...12,622,165
Ensembl chrNW_004955409:12,542,401...12,620,971 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO (PMID:9126927)
(PMID:9389660)		 MGI PMID:9126927 PMID:9389660 NCBI chrNW_004955429:23,011,627...23,198,188
Ensembl chrNW_004955429:23,010,790...23,198,250 		JBrowse link
regulation of T cell homeostatic proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Lmo1 LIM domain only 1 acts_upstream_of_or_within ISO (PMID:1508213) MGI PMID:1508213 NCBI chrNW_004955414:24,021,275...24,072,098
Ensembl chrNW_004955414:24,021,218...24,061,183 		JBrowse link
regulation of T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:15240675) MGI PMID:15240675 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Bid BH3 interacting domain death agonist acts_upstream_of_or_within ISO (PMID:15855651) MGI PMID:15855651 NCBI chrNW_004955454:5,776,656...5,785,500
Ensembl chrNW_004955454:5,777,667...5,783,118 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (PMID:14608382) MGI PMID:14608382 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G Il27 interleukin 27 acts_upstream_of_or_within ISO (PMID:12121660) MGI PMID:12121660 NCBI chrNW_004955493:6,712,005...6,717,417
Ensembl chrNW_004955493:6,712,005...6,717,417 		JBrowse link
G Lgals3 galectin 3 involved_in ISO (PMID:8692888) BHF-UCL PMID:8692888 NCBI chrNW_004955409:8,448,120...8,452,437
Ensembl chrNW_004955409:8,447,774...8,452,438 		JBrowse link
G Rac2 Rac family small GTPase 2 involved_in ISO (MGI:3702218|PMID:11581314) CACAO PMID:11581314 MGI:3702218 NCBI chrNW_004955413:23,697,504...23,710,668
Ensembl chrNW_004955413:23,693,669...23,710,704 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:24043312) MGI PMID:24043312 NCBI chrNW_004955441:6,649,895...6,724,271
Ensembl chrNW_004955441:6,646,385...6,713,028 		JBrowse link
G Sos2 SOS Ras/Rho guanine nucleotide exchange factor 2 acts_upstream_of_or_within ISO (PMID:24043312) MGI PMID:24043312 NCBI chrNW_004955409:12,542,353...12,622,165
Ensembl chrNW_004955409:12,542,401...12,620,971 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (MGI:5888814|PMID:28052249) ARUK-UCL PMID:28052249 MGI:5888814 NCBI chrNW_004955486:1,790,531...1,817,986
Ensembl chrNW_004955486:1,792,115...1,818,362 		JBrowse link
G Tnfsf18 TNF superfamily member 18 involved_in ISO (MGI:2682525|PMID:14608036) UniProt PMID:14608036 MGI:2682525 NCBI chrNW_004955406:13,391,162...13,402,479 JBrowse link
G Znhit1 zinc finger HIT-type containing 1 acts_upstream_of_or_within ISO (PMID:19501046) MGI PMID:19501046 NCBI chrNW_004955456:16,070,622...16,082,286
Ensembl chrNW_004955456:16,070,622...16,082,286 		JBrowse link
regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il27 interleukin 27 involved_in ISO (PMID:12734330) UniProt PMID:12734330 NCBI chrNW_004955493:6,712,005...6,717,417
Ensembl chrNW_004955493:6,712,005...6,717,417 		JBrowse link
regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 NOT|involved_in ISO (MGI:3820359|PMID:19050256) UniProt PMID:19050256 MGI:3820359 NCBI chrNW_004955453:6,846,625...6,850,007
Ensembl chrNW_004955453:6,846,549...6,850,031 		JBrowse link
G Ccr6 C-C motif chemokine receptor 6 NOT|involved_in ISO (MGI:3820359|PMID:19050256) UniProt PMID:19050256 MGI:3820359 NCBI chrNW_004955439:14,921,524...14,949,493
Ensembl chrNW_004955439:14,920,601...14,924,191 		JBrowse link
regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:15322540) UniProt PMID:15322540 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd28 CD28 molecule involved_in ISO (PMID:18641304) BHF-UCL PMID:18641304 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of		 ISO (PMID:32644293)
(PMID:16769892), (PMID:17028180)		 UniProt
MGI		 PMID:16769892 PMID:17028180 PMID:32644293 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:32644293)
(PMID:15100250)
(PMID:17481928)		 UniProt
MGI		 PMID:15100250 PMID:17481928 PMID:32644293 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (PMID:32644293) UniProt PMID:32644293 NCBI chrNW_004955405:31,977,045...32,006,733
Ensembl chrNW_004955405:31,977,602...32,006,810 		JBrowse link
T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of		 ISO (PMID:7594462)
(PMID:10845921), (PMID:11435465)		 UniProt
MGI		 PMID:7594462 PMID:10845921 PMID:11435465 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Azi2 5-azacytidine induced 2 acts_upstream_of_or_within ISO (PMID:23610142) MGI PMID:23610142 NCBI chrNW_004955430:19,802,106...19,829,566 JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:12867038)
(PMID:12818158)		 MGI PMID:12818158 PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cblb Cbl proto-oncogene B acts_upstream_of_or_within ISO (PMID:11070165) MGI PMID:11070165 NCBI chrNW_004955427:6,601,651...6,812,896
Ensembl chrNW_004955427:6,604,820...6,812,882 		JBrowse link
G Cd276 CD276 molecule involved_in ISO (PMID:18650384) UniProt PMID:18650384 NCBI chrNW_004955450:3,884,437...3,896,416 JBrowse link
G Cd28 CD28 molecule involved_in ISO (PMID:18337562)
(PMID:23918985)		 BHF-UCL
UniProt		 PMID:18337562 PMID:23918985 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of ISO (PMID:12874832) MGI PMID:12874832 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cd4 CD4 molecule acts_upstream_of ISO (PMID:12421911) MGI PMID:12421911 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:7528188) UniProt PMID:7528188 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Cd48 CD48 molecule acts_upstream_of_or_within ISO (PMID:1383383) MGI PMID:1383383 NCBI chrNW_004955468:12,398,671...12,411,241
Ensembl chrNW_004955468:12,396,032...12,410,086 		JBrowse link
G Cd80 CD80 molecule involved_in ISO (PMID:23918985) UniProt PMID:23918985 NCBI chrNW_004955427:19,237,251...19,274,001
Ensembl chrNW_004955427:19,236,445...19,261,517 		JBrowse link
G Cd86 CD86 molecule involved_in ISO (PMID:7527824) UniProt PMID:7527824 NCBI chrNW_004955427:21,375,820...21,436,767
Ensembl chrNW_004955427:21,375,794...21,435,874 		JBrowse link
G Cd8a CD8 subunit alpha involved_in ISO (PMID:17145893) ComplexPortal PMID:17145893 NCBI chrNW_004955424:952,595...979,159
Ensembl chrNW_004955424:952,502...978,636 		JBrowse link
G Cd8b CD8 subunit beta involved_in ISO (PMID:17145893) ComplexPortal PMID:17145893 NCBI chrNW_004955424:922,916...939,469 JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit acts_upstream_of_or_within ISO (PMID:16253349) MGI PMID:16253349 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700 		JBrowse link
G Coro1a coronin 1A acts_upstream_of ISO (PMID:18199416) MGI PMID:18199416 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Cul4a cullin 4A involved_in ISO (PMID:34065512) UniProt PMID:34065512 NCBI chrNW_004955404:583,261...617,914
Ensembl chrNW_004955404:583,261...617,914 		JBrowse link
G Dcaf12 DDB1 and CUL4 associated factor 12 involved_in ISO (PMID:34065512) UniProt PMID:34065512 NCBI chrNW_004955472:1,943,477...1,974,938
Ensembl chrNW_004955472:1,943,477...1,974,938 		JBrowse link
G Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit involved_in ISO (PMID:9642163) UniProt PMID:9642163 NCBI chrNW_004955452:1,186,733...1,195,691
Ensembl chrNW_004955452:1,186,733...1,240,087 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO (PMID:15699074), (PMID:17187070) MGI PMID:15699074 PMID:17187070 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Dpp4 dipeptidyl peptidase 4 involved_in ISO (PMID:7594462) UniProt PMID:7594462 NCBI chrNW_004955449:11,795,994...11,873,408
Ensembl chrNW_004955449:11,795,536...11,875,412 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:15466453)
(PMID:10072494)		 UniProt
MGI		 PMID:10072494 PMID:15466453 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Gja1 gap junction protein alpha 1 involved_in ISO (MGI:5301502|PMID:21844382) UniProt PMID:21844382 MGI:5301502 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095 		JBrowse link
G Hsh2d hematopoietic SH2 domain containing acts_upstream_of_or_within ISO (PMID:12960172) MGI PMID:12960172 NCBI chrNW_004955524:1,392,805...1,399,662
Ensembl chrNW_004955524:1,393,325...1,397,490 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 acts_upstream_of_or_within ISO (PMID:15371451), (PMID:17164250), (PMID:18256040)
(PMID:17164250)		 MGI PMID:15371451 PMID:17164250 PMID:18256040 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419 		JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 acts_upstream_of_or_within ISO (PMID:17164250) MGI PMID:17164250 NCBI chrNW_004955407:32,730,973...32,755,404
Ensembl chrNW_004955407:32,730,953...32,754,651 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:18337562) BHF-UCL PMID:18337562 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (PMID:18792410) MGI PMID:18792410 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Lag3 lymphocyte activating 3 acts_upstream_of ISO (PMID:12421911) MGI PMID:12421911 NCBI chrNW_004955413:4,379,529...4,385,456
Ensembl chrNW_004955413:4,378,972...4,385,909 		JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:12110186) UniProt PMID:12110186 NCBI chrNW_004955501:1,867,956...1,963,091 JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:18931680) MGI PMID:18931680 NCBI chrNW_004955409:183,645...281,252
Ensembl chrNW_004955409:183,545...281,318 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:15705585) UniProt PMID:15705585 NCBI chrNW_004955442:13,795,322...13,834,362
Ensembl chrNW_004955442:13,814,434...13,833,222 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of ISO (PMID:21874024) MGI PMID:21874024 NCBI chrNW_004955424:20,212,077...20,263,761
Ensembl chrNW_004955424:20,211,600...20,263,761 		JBrowse link
G Prkcq protein kinase C theta acts_upstream_of ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699 		JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:26021297) ParkinsonsUK-UCL PMID:26021297 NCBI chrNW_004955406:41,452,733...41,468,467
Ensembl chrNW_004955406:41,462,534...41,468,948 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:27776107), (PMID:29155103) UniProt PMID:27776107 PMID:29155103 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:34065512) UniProt PMID:34065512 NCBI chrNW_004955413:26,579,759...26,592,980
Ensembl chrNW_004955413:26,579,759...26,592,980 		JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941) MGI PMID:10716941 NCBI chrNW_004955430:10,587,539...10,683,887
Ensembl chrNW_004955430:10,587,539...10,683,887 		JBrowse link
G Sla2 Src like adaptor 2 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:11891219)
(PMID:11891219), (PMID:12024036)		 UniProt
MGI		 PMID:11891219 PMID:12024036 NCBI chrNW_004955422:24,978,447...25,003,732
Ensembl chrNW_004955422:24,986,028...25,003,732 		JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (MGI:1332876|PMID:10064594) UniProt PMID:10064594 MGI:1332876 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136 		JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:17481928)
(PMID:18997793)
(PMID:12646629)		 MGI PMID:12646629 PMID:17481928 PMID:18997793 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Tnfaip8l2 TNF alpha induced protein 8 like 2 acts_upstream_of ISO (PMID:21963221) MGI PMID:21963221 NCBI chrNW_004955588:514,567...517,314
Ensembl chrNW_004955588:514,567...517,314 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:20303295) MGI PMID:20303295 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
G Treml2 triggering receptor expressed on myeloid cells like 2 involved_in ISO (PMID:18650384) UniProt PMID:18650384 NCBI chrNW_004955437:7,812,005...7,824,344 JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:11070165) MGI PMID:11070165 NCBI chrNW_004955495:2,697,508...2,755,468
Ensembl chrNW_004955495:2,695,730...2,755,824 		JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (PMID:11070165) MGI PMID:11070165 NCBI chrNW_004955543:243,618...253,489
Ensembl chrNW_004955543:247,631...253,274 		JBrowse link
T cell activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5544501|PMID:24310610) UniProt PMID:24310610 MGI:5544501 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (MGI:4839888|PMID:19845798) UniProt PMID:19845798 MGI:4839888 NCBI chrNW_004955425:24,050,901...24,054,039 JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 involved_in ISO (PMID:17294403) UniProt PMID:17294403 NCBI chrNW_004955518:3,815,181...3,863,440
Ensembl chrNW_004955518:3,814,840...3,891,299 		JBrowse link
G Mdk midkine involved_in ISO (MGI:5897914|PMID:28183532) UniProt PMID:28183532 MGI:5897914 NCBI chrNW_004955422:1,655,351...1,657,026
Ensembl chrNW_004955422:1,655,358...1,657,044 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:17698590) MGI PMID:17698590 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17698590) MGI PMID:17698590 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234 		JBrowse link
T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1ip amyloid beta precursor protein binding family B member 1 interacting protein acts_upstream_of_or_within ISO (PMID:17403904) MGI PMID:17403904 NCBI chrNW_004955429:2,874,783...2,973,321
Ensembl chrNW_004955429:2,871,943...2,930,213 		JBrowse link
G Fgl2 fibrinogen like 2 acts_upstream_of_or_within ISO (PMID:29341118) MGI PMID:29341118 NCBI chrNW_004955410:7,899,263...7,903,499
Ensembl chrNW_004955410:7,899,309...7,902,722 		JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO (PMID:2477710) BHF-UCL PMID:2477710 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755 		JBrowse link
G Itgal integrin subunit alpha L involved_in ISO (PMID:2477710) BHF-UCL PMID:2477710 NCBI chrNW_004955493:7,397,813...7,435,420
Ensembl chrNW_004955493:7,397,991...7,439,070 		JBrowse link
T cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card11 caspase recruitment domain family member 11 involved_in ISO (PMID:17287217) UniProt PMID:17287217 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:17287217) UniProt PMID:17287217 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403 		JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490 		JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004955472:1,427,660...1,428,771
Ensembl chrNW_004955472:1,427,710...1,429,102 		JBrowse link
G Cd160 CD160 molecule involved_in ISO (PMID:11978774), (PMID:9973372) UniProt PMID:9973372 PMID:11978774 NCBI chrNW_004955568:365,700...372,149 JBrowse link
G Cd24 CD24 molecule involved_in ISO (PMID:11272271) UniProt PMID:11272271 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cd274 CD274 molecule involved_in ISO (PMID:10581077) UniProt PMID:10581077 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904 		JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (PMID:10429671), (PMID:12925852), (PMID:15240667), (PMID:8125140), (PMID:9368605)
(PMID:7688139), (PMID:9368605)
(PMID:23793062)		 RGD
MGI		 PMID:7688139 PMID:7730618 PMID:8125140 PMID:9368605 PMID:10429671 More... RGD:2303155 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cd5 CD5 molecule acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chrNW_004955511:5,656,333...5,670,510
Ensembl chrNW_004955511:5,664,682...5,669,368 		JBrowse link
G Cd80 CD80 molecule acts_upstream_of_or_within ISO (PMID:1385153), (PMID:15568026) MGI PMID:1385153 PMID:15568026 NCBI chrNW_004955427:19,237,251...19,274,001
Ensembl chrNW_004955427:19,236,445...19,261,517 		JBrowse link
G Dpp4 dipeptidyl peptidase 4 involved_in ISO (PMID:10900005), (PMID:17287217) UniProt PMID:10900005 PMID:17287217 NCBI chrNW_004955449:11,795,994...11,873,408
Ensembl chrNW_004955449:11,795,536...11,875,412 		JBrowse link
G Efnb1 ephrin B1 acts_upstream_of_or_within ISO (PMID:15599401) MGI PMID:15599401 NCBI chrNW_004955475:8,360,504...8,372,431
Ensembl chrNW_004955475:8,360,465...8,373,578 		JBrowse link
G Efnb2 ephrin B2 acts_upstream_of_or_within ISO (PMID:15599401) MGI PMID:15599401 NCBI chrNW_004955404:5,000,906...5,030,068
Ensembl chrNW_004955404:5,000,906...5,030,126 		JBrowse link
G Efnb3 ephrin B3 acts_upstream_of_or_within ISO (PMID:15599401) MGI PMID:15599401 NCBI chrNW_004955467:9,217,796...9,225,223
Ensembl chrNW_004955467:9,217,796...9,224,940 		JBrowse link
G Hhla2 HHLA2 member of B7 family involved_in ISO (PMID:23784006) UniProt PMID:23784006 NCBI chrNW_004955427:8,944,387...9,007,648
Ensembl chrNW_004955427:8,926,229...9,009,156 		JBrowse link
G Icos inducible T cell costimulator ISO RGD PMID:11006126 RGD:631942 NCBI chrNW_004955457:10,934,390...10,952,318
Ensembl chrNW_004955457:10,934,341...10,952,404 		JBrowse link
G Lgals1 galectin 1 acts_upstream_of_or_within ISO (PMID:22357632) MGI PMID:22357632 NCBI chrNW_004955413:24,072,086...24,075,452
Ensembl chrNW_004955413:24,072,086...24,075,452 		JBrowse link
G Lgals8 galectin 8 acts_upstream_of_or_within ISO (PMID:22357632) MGI PMID:22357632 NCBI chrNW_004955492:3,673,233...3,693,777
Ensembl chrNW_004955492:3,673,233...3,693,776 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:10429671), (PMID:11380685), (PMID:7790813) MGI PMID:7790813 PMID:10429671 PMID:11380685 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Tmigd2 transmembrane and immunoglobulin domain containing 2 involved_in ISO (PMID:23784006) UniProt PMID:23784006 NCBI chrNW_004955495:4,561,251...4,578,432
Ensembl chrNW_004955495:4,572,442...4,581,628 		JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of_or_within ISO (PMID:15240667), (PMID:15368291) MGI PMID:15240667 PMID:15368291 NCBI chrNW_004955413:27,341,977...27,344,009 JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 involved_in ISO (PMID:10754304) UniProt PMID:10754304 NCBI chrNW_004955486:8,670,182...8,684,677 JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO (PMID:15240667), (PMID:15368291) MGI PMID:15240667 PMID:15368291 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
G Tnfsf14 TNF superfamily member 14 involved_in
acts_upstream_of_or_within		 ISO (PMID:10754304)
(PMID:15568026)		 UniProt
MGI		 PMID:10754304 PMID:15568026 NCBI chrNW_004955495:2,829,314...2,834,826
Ensembl chrNW_004955495:2,829,402...2,835,335 		JBrowse link
T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of ISO (PMID:7731963)
(PMID:9478961)		 MGI PMID:7731963 PMID:9478961 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:31539517) MGI PMID:31539517 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:12717432) MGI PMID:12717432 NCBI chrNW_004955424:23,233,523...23,330,679
Ensembl chrNW_004955424:23,233,523...23,330,679 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8170972)
(PMID:9215624)		 MGI PMID:8170972 PMID:9215624 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 NOT|acts_upstream_of_or_within ISO (PMID:17028169) MGI PMID:17028169 NCBI chrNW_004955440:17,364,996...17,497,446
Ensembl chrNW_004955440:17,371,321...17,497,616 		JBrowse link
G Cd4 CD4 molecule involved_in ISO (PMID:1533274) UniProt PMID:1533274 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:17684005) BHF-UCL PMID:17684005 NCBI chrNW_004955444:17,859,999...18,067,623
Ensembl chrNW_004955444:17,858,771...18,067,248 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (PMID:14608382) MGI PMID:14608382 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (MGI:3044313|PMID:15146182) UniProt PMID:15146182 MGI:3044313 NCBI chrNW_004955416:7,807,049...7,816,346
Ensembl chrNW_004955416:7,807,049...7,817,420 		JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 acts_upstream_of ISO (PMID:12794108) MGI PMID:12794108 NCBI chrNW_004955482:9,416,456...9,447,265
Ensembl chrNW_004955482:9,417,116...9,446,239 		JBrowse link
G Egr1 early growth response 1 acts_upstream_of_or_within ISO (PMID:12165491) MGI PMID:12165491 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23169635) MGI PMID:23169635 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:32610127) MGI PMID:32610127 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:2017177)
(PMID:7956841)		 MGI PMID:2017177 PMID:7956841 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Gpr89a G protein-coupled receptor 89A involved_in ISO (MGI:6405642|PMID:32220963) UniProt PMID:32220963 MGI:6405642 NCBI chrNW_004955568:436,817...493,188 JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:15713121) MGI PMID:15713121 NCBI chrNW_004955437:2,478,414...2,486,809
Ensembl chrNW_004955437:2,478,414...2,486,809 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (MGI:6740265|PMID:34155405) UniProt PMID:34155405 MGI:6740265 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO (PMID:9215624) MGI PMID:9215624 NCBI chrNW_004955426:20,785,896...20,818,512
Ensembl chrNW_004955426:20,787,471...20,818,577 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (PMID:14517551) MGI PMID:14517551 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (PMID:10383933) UniProt PMID:10383933 NCBI chrNW_004955538:3,421,685...3,433,829
Ensembl chrNW_004955538:3,421,685...3,433,842 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (MGI:6393224|PMID:27733580) GO_Central PMID:27733580 MGI:6393224 NCBI chrNW_004955451:11,770,201...11,802,992
Ensembl chrNW_004955451:11,770,201...11,802,992 		JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 acts_upstream_of_or_within ISO (PMID:26438836) MGI PMID:26438836 NCBI chrNW_004955559:2,080,085...2,087,579
Ensembl chrNW_004955559:2,080,085...2,087,579 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase involved_in ISO (MGI:2387257|PMID:12354381) UniProt PMID:12354381 MGI:2387257 NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:1579166) UniProt PMID:1579166 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Lep leptin involved_in ISO (MGI:1277764|PMID:9732873) UniProt PMID:9732873 MGI:1277764 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472 		JBrowse link
G Lepr leptin receptor involved_in ISO (MGI:1277764|PMID:9732873) UniProt PMID:9732873 MGI:1277764 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (MGI:3838059|PMID:19217325) UniProt PMID:19217325 MGI:3838059 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:19179613) MGI PMID:19179613 NCBI chrNW_004955425:3,718,291...3,755,942
Ensembl chrNW_004955425:3,718,206...3,756,142 		JBrowse link
G Lmbr1l limb development membrane protein 1 like involved_in ISO (MGI:6303730|PMID:31073040) UniProt PMID:31073040 MGI:6303730 NCBI chrNW_004955500:7,922,422...7,934,538
Ensembl chrNW_004955500:7,921,233...7,934,538 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:31539517) MGI PMID:31539517 NCBI chrNW_004955505:729...64,653 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:9768749) MGI PMID:9768749 NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:26019294)
(PMID:31182790)		 MGI PMID:26019294 PMID:31182790 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in ISO (PMID:16439204) UniProt PMID:16439204 NCBI chrNW_004955453:14,278,773...14,362,167
Ensembl chrNW_004955453:14,281,069...14,363,876 		JBrowse link
G Patz1 POZ/BTB and AT hook containing zinc finger 1 acts_upstream_of_or_within ISO (PMID:16491076) MGI PMID:16491076 NCBI chrNW_004955455:5,544,841...5,566,630
Ensembl chrNW_004955455:5,542,659...5,565,154 		JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:16314502) MGI PMID:16314502 NCBI chrNW_004955407:38,949,060...38,982,984
Ensembl chrNW_004955407:38,948,200...38,982,984 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta acts_upstream_of_or_within ISO (PMID:12091710) MGI PMID:12091710 NCBI chrNW_004955437:18,323,852...18,377,815
Ensembl chrNW_004955437:18,323,857...18,377,815 		JBrowse link
G Prex1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 acts_upstream_of_or_within ISO (PMID:21178006) MGI PMID:21178006 NCBI chrNW_004955445:9,229,775...9,401,277
Ensembl chrNW_004955445:9,229,793...9,398,662 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (MGI:1096020|PMID:9271584) UniProt PMID:9271584 MGI:1096020 NCBI chrNW_004955402:771,410...846,671 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 acts_upstream_of_or_within ISO (PMID:14752163) MGI PMID:14752163 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in ISO (MGI:3521537|PMID:15557316), (MGI:61371|PMID:8334701) UniProt PMID:8334701 PMID:15557316 MGI:3521537 MGI:61371 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K ISO RGD PMID:17434290 RGD:15036800 NCBI chrNW_004955436:8,975,742...9,371,608
Ensembl chrNW_004955436:8,975,554...9,380,971 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:11980719), (PMID:14595002) MGI PMID:11980719 PMID:14595002 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Rhoh ras homolog family member H involved_in ISO (MGI:3686961|PMID:17028588), (MGI:3822992|PMID:17119112) UniProt PMID:17028588 PMID:17119112 MGI:3686961 MGI:3822992 NCBI chrNW_004955443:7,227,751...7,269,984
Ensembl chrNW_004955443:7,227,751...7,264,821 		JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within ISO (PMID:7862157) MGI PMID:7862157 NCBI chrNW_004955437:10,598,145...10,885,858
Ensembl chrNW_004955437:10,598,145...10,800,560 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (MGI:3813366|PMID:9174623) BHF-UCL PMID:9174623 MGI:3813366 NCBI chrNW_004955483:5,076,664...5,077,059 JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chrNW_004955449:1,347,781...1,404,368 JBrowse link
G Tbx21 T-box transcription factor 21 acts_upstream_of_or_within ISO (PMID:20399120) MGI PMID:20399120 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:15294947) MGI PMID:15294947 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:17481928) MGI PMID:17481928 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:22585710) MGI PMID:22585710 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:21178006) MGI PMID:21178006 NCBI chrNW_004955495:2,697,508...2,755,468
Ensembl chrNW_004955495:2,695,730...2,755,824 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of ISO (PMID:19723499) MGI PMID:19723499 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of ISO (PMID:9208839) MGI PMID:9208839 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of ISO (PMID:11435465)
(PMID:11067867), (PMID:12163459), (PMID:16670300)
(PMID:11067867), (PMID:16670300)		 MGI PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (MGI:3828349|PMID:17371977) BHF-UCL PMID:17371977 MGI:3828349 NCBI chrNW_004955487:5,180,241...5,218,298
Ensembl chrNW_004955487:5,180,252...5,218,216 		JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:16025118) MGI PMID:16025118 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832 		JBrowse link
G B2m beta-2-microglobulin acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568 		JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:16670294) MGI PMID:16670294 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8170972), (PMID:9028316) MGI PMID:8170972 PMID:9028316 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Cd3e CD3e molecule ISO RGD PMID:11896936 RGD:2313407 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cdk6 cyclin dependent kinase 6 acts_upstream_of_or_within ISO (PMID:21508411) MGI PMID:21508411 NCBI chrNW_004955432:9,521,794...9,727,772
Ensembl chrNW_004955432:9,521,794...9,726,417 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (PMID:16025118) MGI PMID:16025118 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within ISO (PMID:15879105) MGI PMID:15879105 NCBI chrNW_004955442:12,971,031...13,002,605
Ensembl chrNW_004955442:12,967,438...13,010,943 		JBrowse link
G Fadd Fas associated via death domain involved_in ISO (MGI:5291865|PMID:21876153) UniProt PMID:21876153 MGI:5291865 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918 		JBrowse link
G Fzd7 frizzled class receptor 7 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955457:12,729,277...12,733,057
Ensembl chrNW_004955457:12,731,279...12,732,979 		JBrowse link
G Fzd8 frizzled class receptor 8 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955462:5,870,410...5,873,714 JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:8945476)
(PMID:14670303)
(PMID:18776904)
(PMID:19934022)		 MGI PMID:8945476 PMID:14670303 PMID:18776904 PMID:19934022 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:22665763) MGI PMID:22665763 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15855276) MGI PMID:15855276 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:9252128)
(PMID:9916699)		 MGI PMID:9252128 PMID:9916699 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of ISO (PMID:9215626) MGI PMID:9215626 NCBI chrNW_004955426:20,785,896...20,818,512
Ensembl chrNW_004955426:20,787,471...20,818,577 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase acts_upstream_of_or_within ISO (PMID:14715629) MGI PMID:14715629 NCBI chrNW_004955506:5,577,735...5,588,307
Ensembl chrNW_004955506:5,577,437...5,588,372 		JBrowse link
G LOC102013688 major histocompatibility complex class I-related gene protein involved_in ISO (MGI:3664456|PMID:12634786) UniProt PMID:12634786 MGI:3664456 NCBI chrNW_004955406:20,098,544...20,117,065
Ensembl chrNW_004955406:20,098,538...20,125,057 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO (PMID:19164599) MGI PMID:19164599 NCBI chrNW_004955445:16,219,675...16,222,913 JBrowse link
G Mpzl2 myelin protein zero like 2 acts_upstream_of_or_within ISO (PMID:19851463) MGI PMID:19851463 NCBI chrNW_004955412:19,422,532...19,434,596
Ensembl chrNW_004955412:19,422,537...19,434,596 		JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 acts_upstream_of_or_within ISO (PMID:17640884) MGI PMID:17640884 NCBI chrNW_004955413:33,492,348...33,503,804 JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842 		JBrowse link
G Nfkbid NFKB inhibitor delta acts_upstream_of ISO (PMID:11931770) MGI PMID:11931770 NCBI chrNW_004955468:2,680,934...2,688,797
Ensembl chrNW_004955468:2,680,806...2,689,155 		JBrowse link
G Nkap NFKB activating protein acts_upstream_of_or_within ISO (PMID:20610818) MGI PMID:20610818 NCBI chrNW_004955534:106,122...119,508
Ensembl chrNW_004955534:106,122...119,344 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Prr7 proline rich 7, synaptic involved_in ISO (PMID:27657535) MGI PMID:27657535 NCBI chrNW_004955408:29,685,254...29,695,113
Ensembl chrNW_004955408:29,692,004...29,695,113 		JBrowse link
G Psmb11 proteasome subunit beta 11 acts_upstream_of_or_within ISO (PMID:31915251) MGI PMID:31915251 NCBI chrNW_004955409:37,260,080...37,260,866 JBrowse link
G Rabl3 RAB, member of RAS oncogene family like 3 involved_in ISO (MGI:6405642|PMID:32220963) UniProt PMID:32220963 MGI:6405642 NCBI chrNW_004955427:20,204,901...20,242,242
Ensembl chrNW_004955427:20,204,901...20,242,242 		JBrowse link
G Rag1 recombination activating 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:50458|PMID:1547488)
(PMID:9215624)		 UniProt
MGI		 PMID:1547488 PMID:9215624 MGI:50458 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rag2 recombination activating 2 involved_in ISO (MGI:50458|PMID:1547488) UniProt PMID:1547488 MGI:50458 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Ripk3 receptor interacting serine/threonine kinase 3 involved_in ISO (MGI:5291865|PMID:21876153) UniProt PMID:21876153 MGI:5291865 NCBI chrNW_004955409:35,961,604...35,965,477
Ensembl chrNW_004955409:35,937,880...35,965,712 		JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
G Rps6 ribosomal protein S6 acts_upstream_of_or_within ISO (PMID:16357222) MGI PMID:16357222 NCBI chrNW_004955434:21,744,045...21,745,646
Ensembl chrNW_004955434:21,744,082...21,746,626 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of		 ISO (MGI:3847177|PMID:19273836)
(PMID:10981962)		 BHF-UCL
MGI		 PMID:10981962 PMID:19273836 MGI:3847177 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) MGI PMID:18958875 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 acts_upstream_of ISO (PMID:28598420) MGI PMID:28598420 NCBI chrNW_004955458:2,084,931...2,108,328
Ensembl chrNW_004955458:2,084,868...2,108,335 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:16357222) MGI PMID:16357222 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within ISO (PMID:22201126) MGI PMID:22201126 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (MGI:4818820|PMID:20622884) UniProt
BHF-UCL		 PMID:20622884 MGI:4818820 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:4818820|PMID:20622884) UniProt
BHF-UCL		 PMID:20622884 MGI:4818820 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4d C-type lectin domain family 4 member D acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chrNW_004955413:5,267,548...5,276,969
Ensembl chrNW_004955413:5,267,161...5,277,090 		JBrowse link
G Clec4e C-type lectin domain family 4 member E acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chrNW_004955413:5,256,523...5,261,385
Ensembl chrNW_004955413:5,256,440...5,262,938 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chrNW_004955468:12,971,931...12,975,206
Ensembl chrNW_004955468:12,971,931...12,975,206 		JBrowse link
G Sema4a semaphorin 4A involved_in ISO (MGI:3574161|PMID:15780988) UniProt PMID:15780988 MGI:3574161 NCBI chrNW_004955545:2,316,402...2,341,873
Ensembl chrNW_004955545:2,316,390...2,342,233 		JBrowse link
T cell homeostatic proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:7569956), (PMID:9241272) MGI PMID:7569956 PMID:9241272 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of ISO (PMID:15477346) MGI PMID:15477346 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Foxn1 forkhead box N1 involved_in ISO (MGI:5554515|PMID:24184560) UniProt PMID:24184560 MGI:5554515 NCBI chrNW_004955481:4,611,246...4,640,606
Ensembl chrNW_004955481:4,611,087...4,627,113 		JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:9252127) MGI PMID:9252127 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO (PMID:28169274) MGI PMID:28169274 NCBI chrNW_004955493:8,295,868...8,302,638
Ensembl chrNW_004955493:8,295,868...8,304,520 		JBrowse link
G Ccnd3 cyclin D3 acts_upstream_of_or_within ISO (PMID:14706337) MGI PMID:14706337 NCBI chrNW_004955437:8,266,523...8,273,855
Ensembl chrNW_004955437:8,268,118...8,273,855 		JBrowse link
G Cd151 CD151 molecule (Raph blood group) acts_upstream_of_or_within ISO (PMID:15199151) MGI PMID:15199151 NCBI chrNW_004955476:11,294,359...11,298,990
Ensembl chrNW_004955476:11,294,359...11,337,825 		JBrowse link
G Cd276 CD276 molecule acts_upstream_of ISO (PMID:12925852) MGI PMID:12925852 NCBI chrNW_004955450:3,884,437...3,896,416 JBrowse link
G Cd28 CD28 molecule acts_upstream_of ISO (PMID:12925852), (PMID:15240667)
(PMID:10791997), (PMID:7688139)		 MGI PMID:7688139 PMID:10791997 PMID:12925852 PMID:15240667 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd37 CD37 molecule acts_upstream_of ISO (PMID:20709950) MGI PMID:20709950 NCBI chrNW_004955559:1,465,937...1,471,249
Ensembl chrNW_004955559:1,465,937...1,471,249 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of ISO (PMID:10072077), (PMID:10485657), (PMID:12874832), (PMID:15368291) MGI PMID:10072077 PMID:10485657 PMID:12874832 PMID:15368291 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Coro1a coronin 1A acts_upstream_of ISO (PMID:18199416) MGI PMID:18199416 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Crip3 cysteine rich protein 3 acts_upstream_of_or_within ISO (PMID:11713292) MGI PMID:11713292 NCBI chrNW_004955437:9,210,901...9,215,471
Ensembl chrNW_004955437:9,210,901...9,215,471 		JBrowse link
G Ctps1 CTP synthase 1 involved_in ISO (PMID:24870241) UniProt PMID:24870241 NCBI chrNW_004955537:773,664...811,084
Ensembl chrNW_004955537:774,002...813,254 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12707343) MGI PMID:12707343 NCBI chrNW_004955546:1,929,269...1,941,690
Ensembl chrNW_004955546:1,929,269...1,941,690 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (PMID:12707343) MGI PMID:12707343 NCBI chrNW_004955440:3,456,165...3,460,024
Ensembl chrNW_004955440:3,455,153...3,460,109 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of ISO (PMID:17724087) MGI PMID:17724087 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Ebi3 Epstein-Barr virus induced 3 involved_in ISO (MGI:2181922|PMID:12121660) CACAO PMID:12121660 MGI:2181922 NCBI chrNW_004955495:4,609,841...4,615,686 JBrowse link
G Efnb1 ephrin B1 acts_upstream_of ISO (PMID:15502157) MGI PMID:15502157 NCBI chrNW_004955475:8,360,504...8,372,431
Ensembl chrNW_004955475:8,360,465...8,373,578 		JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A acts_upstream_of_or_within ISO (PMID:14605212) MGI PMID:14605212 NCBI chrNW_004955596:580,106...606,210
Ensembl chrNW_004955596:580,106...603,255 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B acts_upstream_of_or_within ISO (PMID:14605212) MGI PMID:14605212 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:16769892)
(PMID:16203996)		 MGI PMID:16203996 PMID:16769892 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Gja1 gap junction protein alpha 1 involved_in ISO (MGI:6274954|PMID:26648560) UniProt PMID:26648560 MGI:6274954 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of ISO (PMID:15870295) MGI PMID:15870295 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of ISO (PMID:18077788) MGI PMID:18077788 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829 		JBrowse link
G Ifng interferon gamma acts_upstream_of ISO (PMID:16280321) MGI PMID:16280321 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Il12a interleukin 12A acts_upstream_of ISO (PMID:11057672) MGI PMID:11057672 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il12b interleukin 12B acts_upstream_of ISO (PMID:11057672) MGI PMID:11057672 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO (PMID:1588041) MGI PMID:1588041 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of ISO (PMID:19124723) MGI PMID:19124723 NCBI chrNW_004955501:1,826,687...1,863,261 JBrowse link
G Il23a interleukin 23 subunit alpha acts_upstream_of_or_within ISO (PMID:16982811) MGI PMID:16982811 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (PMID:1588041) MGI PMID:1588041 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Kitlg KIT ligand acts_upstream_of ISO (PMID:15947484) MGI PMID:15947484 NCBI chrNW_004955405:25,816,137...25,969,006
Ensembl chrNW_004955405:25,886,447...25,969,395 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:19179613), (PMID:24287405) MGI PMID:19179613 PMID:24287405 NCBI chrNW_004955425:3,718,291...3,755,942
Ensembl chrNW_004955425:3,718,206...3,756,142 		JBrowse link
G Lmbr1l limb development membrane protein 1 like involved_in ISO (MGI:6303730|PMID:31073040) UniProt PMID:31073040 MGI:6303730 NCBI chrNW_004955500:7,922,422...7,934,538
Ensembl chrNW_004955500:7,921,233...7,934,538 		JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:14576442) MGI PMID:14576442 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
G Msn moesin involved_in ISO (PMID:27405666) UniProt PMID:27405666 NCBI chrNW_004955475:5,301,856...5,370,378
Ensembl chrNW_004955475:5,301,910...5,370,691 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chrNW_004955505:729...64,653 JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within ISO (PMID:17913918) MGI PMID:17913918 NCBI chrNW_004955468:12,111,078...12,126,404
Ensembl chrNW_004955468:12,111,078...12,127,033 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:15914561) MGI PMID:15914561 NCBI chrNW_004955482:7,048,674...7,087,525
Ensembl chrNW_004955482:7,048,776...7,086,926 		JBrowse link
G Pde5a phosphodiesterase 5A acts_upstream_of ISO (PMID:17101732) MGI PMID:17101732 NCBI chrNW_004955428:20,785,497...20,904,717
Ensembl chrNW_004955428:20,785,423...20,904,717 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of ISO (PMID:21874024) MGI PMID:21874024 NCBI chrNW_004955424:20,212,077...20,263,761
Ensembl chrNW_004955424:20,211,600...20,263,761 		JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO (PMID:15259009) MGI PMID:15259009 NCBI chrNW_004955415:31,880,801...31,884,453
Ensembl chrNW_004955415:31,880,588...31,884,778 		JBrowse link
G Psmb10 proteasome 20S subunit beta 10 acts_upstream_of_or_within ISO (PMID:15199151) MGI PMID:15199151 NCBI chrNW_004955484:8,777,618...8,780,393
Ensembl chrNW_004955484:8,777,621...8,780,320 		JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of ISO (PMID:16027169) MGI PMID:16027169 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of ISO (PMID:9064344) MGI PMID:9064344 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:12902479) MGI PMID:12902479 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:29155103) UniProt PMID:29155103 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within ISO (PMID:23583643) MGI PMID:23583643 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within ISO (PMID:23583643) MGI PMID:23583643 NCBI chrNW_004955419:5,054,288...5,103,926
Ensembl chrNW_004955419:5,054,289...5,103,926 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:14638696) MGI PMID:14638696 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of ISO (PMID:15356574) MGI PMID:15356574 NCBI chrNW_004955599:688,414...690,644 JBrowse link
G Selenok selenoprotein K acts_upstream_of ISO (PMID:21220695) MGI PMID:21220695 NCBI chrNW_004955430:3,870,925...3,876,636 JBrowse link
G Sh2d2a SH2 domain containing 2A acts_upstream_of_or_within ISO (PMID:10587356) MGI PMID:10587356 NCBI chrNW_004955545:2,881,954...2,891,021
Ensembl chrNW_004955545:2,881,563...2,891,509 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO (PMID:10981962) MGI PMID:10981962 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Spn sialophorin acts_upstream_of ISO (PMID:11380685) MGI PMID:11380685 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO (PMID:15947484) MGI PMID:15947484 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of ISO (PMID:17481928) MGI PMID:17481928 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of ISO (PMID:15240667), (PMID:15368291) MGI PMID:15240667 PMID:15368291 NCBI chrNW_004955413:27,341,977...27,344,009 JBrowse link
G Tnfrsf4 TNF receptor superfamily member 4 involved_in ISO PMID:2828930 BHF-UCL PMID:2828930 RGD:730097 NCBI chrNW_004955486:9,565,424...9,569,836
Ensembl chrNW_004955486:9,567,220...9,569,676 		JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of ISO (PMID:15240667), (PMID:15368291) MGI PMID:15240667 PMID:15368291 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
G Tnfsf4 TNF superfamily member 4 ISO RGD PMID:10772947 RGD:2289071 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of ISO (PMID:16027169) MGI PMID:16027169 NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362 		JBrowse link
G Tspan32 tetraspanin 32 acts_upstream_of ISO (PMID:20709950) MGI PMID:20709950 NCBI chrNW_004955422:14,101,833...14,121,784
Ensembl chrNW_004955422:14,101,833...14,116,101 		JBrowse link
G Zbtb32 zinc finger and BTB domain containing 32 acts_upstream_of_or_within ISO (PMID:15542853) MGI PMID:15542853 NCBI chrNW_004955468:2,834,832...2,844,258 JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D acts_upstream_of ISO (PMID:24415781) MGI PMID:24415781 NCBI chrNW_004955439:11,761,099...11,787,508
Ensembl chrNW_004955439:11,768,812...11,785,230 		JBrowse link
T cell proliferation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule ISO RGD PMID:20500684 RGD:4892204 NCBI chrNW_004955427:21,375,820...21,436,767
Ensembl chrNW_004955427:21,375,794...21,435,874 		JBrowse link
G Rps6 ribosomal protein S6 acts_upstream_of_or_within ISO (PMID:16357222) MGI PMID:16357222 NCBI chrNW_004955434:21,744,045...21,745,646
Ensembl chrNW_004955434:21,744,082...21,746,626 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO (PMID:9176118) MGI PMID:9176118 NCBI chrNW_004955453:14,980,562...14,995,118
Ensembl chrNW_004955453:14,980,562...14,995,608 		JBrowse link
G Tnfsf18 TNF superfamily member 18 involved_in ISO (MGI:2682525|PMID:14608036) UniProt PMID:14608036 MGI:2682525 NCBI chrNW_004955406:13,391,162...13,402,479 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:16357222) MGI PMID:16357222 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:12717433) MGI PMID:12717433 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (PMID:10911993) MGI PMID:10911993 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527 		JBrowse link
T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd4 CD4 molecule involved_in ISO (PMID:9551897) UniProt PMID:9551897 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
T follicular helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (MGI:5565031|PMID:24463518) UniProt PMID:24463518 MGI:5565031 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (MGI:5607369|PMID:24859450) UniProt PMID:24859450 MGI:5607369 NCBI chrNW_004955421:16,595,445...17,075,923
Ensembl chrNW_004955421:16,595,471...17,075,923 		JBrowse link
G Gpr183 G protein-coupled receptor 183 involved_in ISO (MGI:5787848|PMID:27147029) UniProt PMID:27147029 MGI:5787848 NCBI chrNW_004955404:11,264,954...11,277,531
Ensembl chrNW_004955404:11,264,954...11,277,531 		JBrowse link
G Il21 interleukin 21 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Il6 interleukin 6 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within ISO (PMID:23583643) MGI PMID:23583643 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within ISO (PMID:23583643) MGI PMID:23583643 NCBI chrNW_004955419:5,054,288...5,103,926
Ensembl chrNW_004955419:5,054,289...5,103,926 		JBrowse link
T-helper 1 cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT enhancer binding protein beta involved_in ISO (MGI:4360613|PMID:17911624) UniProt PMID:17911624 MGI:4360613 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:22473704) UniProt PMID:22473704 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (PMID:22851706) MGI PMID:22851706 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:15284856) MGI PMID:15284856 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracr2a calcium release activated channel regulator 2A involved_in ISO (PMID:29987160)
(MGI:6195365|PMID:29987160)		 UniProt PMID:29987160 MGI:6195365 NCBI chrNW_004955413:1,425,165...1,544,226
Ensembl chrNW_004955413:1,429,021...1,543,662 		JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15944249) UniProt PMID:15944249 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Il18r1 interleukin 18 receptor 1 acts_upstream_of_or_within ISO (PMID:10227969) MGI PMID:10227969 NCBI chrNW_004955470:7,854,995...7,887,810
Ensembl chrNW_004955470:7,854,988...7,887,883 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955493:5,546,340...5,580,745
Ensembl chrNW_004955493:5,545,944...5,582,422 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (MGI:4834989|PMID:18579517) UniProt PMID:18579517 MGI:4834989 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:31182790) MGI PMID:31182790 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (PMID:16081776) MGI PMID:16081776 NCBI chrNW_004955555:2,060,533...2,086,229
Ensembl chrNW_004955555:2,060,533...2,086,229 		JBrowse link
G Sema4a semaphorin 4A involved_in ISO (MGI:3574161|PMID:15780988) UniProt PMID:15780988 MGI:3574161 NCBI chrNW_004955545:2,316,402...2,341,873
Ensembl chrNW_004955545:2,316,390...2,342,233 		JBrowse link
G Stat4 signal transducer and activator of transcription 4 involved_in ISO (PMID:14688310) UniProt PMID:14688310 NCBI chrNW_004955403:8,061,471...8,144,252
Ensembl chrNW_004955403:8,061,471...8,144,276 		JBrowse link
G Tmem98 transmembrane protein 98 involved_in ISO (MGI:6294180|PMID:25946230) UniProt PMID:25946230 MGI:6294180 NCBI chrNW_004955481:7,788,066...7,797,433
Ensembl chrNW_004955481:7,785,967...7,798,575 		JBrowse link
T-helper 1 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:26410627) MGI PMID:26410627 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Spn sialophorin involved_in ISO (PMID:18036228) UniProt PMID:18036228 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chrNW_004955458:4,833,417...4,847,956
Ensembl chrNW_004955458:4,833,515...4,843,273 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (MGI:1354779|PMID:10761931) UniProt PMID:10761931 MGI:1354779 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISO (MGI:4456325|PMID:20421391), (MGI:5004732|PMID:21572431) UniProt PMID:20421391 PMID:21572431 MGI:4456325 MGI:5004732 NCBI chrNW_004955523:42,365...66,103
Ensembl chrNW_004955523:42,218...66,103 		JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (MGI:5461233|PMID:23241884) UniProt PMID:23241884 MGI:5461233 NCBI chrNW_004955507:5,552,788...5,594,911
Ensembl chrNW_004955507:5,552,764...5,594,911 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:20383124) MGI PMID:20383124 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:3772713|PMID:18164222) GO_Central PMID:18164222 MGI:3772713 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233 		JBrowse link
G Rorc RAR related orphan receptor C involved_in
acts_upstream_of_or_within		 ISO (MGI:3692468|PMID:16990136), (MGI:3772713|PMID:18164222)
(PMID:20383124)
(PMID:18792410)		 GO_Central
MGI		 PMID:16990136 PMID:18164222 PMID:18792410 PMID:20383124 MGI:3692468 MGI:3772713 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISO (MGI:3851267|PMID:19578362), (MGI:5448096|PMID:22983707) UniProt PMID:19578362 PMID:22983707 MGI:3851267 MGI:5448096 NCBI chrNW_004955523:42,365...66,103
Ensembl chrNW_004955523:42,218...66,103 		JBrowse link
G Il6 interleukin 6 involved_in ISO (MGI:6142555|PMID:27893700)
(MGI:3692468|PMID:16990136)		 UniProt PMID:16990136 PMID:27893700 MGI:3692468 MGI:6142555 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Il6r interleukin 6 receptor involved_in ISO (MGI:6142555|PMID:27893700) UniProt PMID:27893700 MGI:6142555 NCBI chrNW_004955545:932,814...979,359
Ensembl chrNW_004955545:950,765...981,762 		JBrowse link
G Irf4 interferon regulatory factor 4 involved_in ISO (MGI:5448096|PMID:22983707) UniProt PMID:22983707 MGI:5448096 NCBI chrNW_004955465:12,497,534...12,512,529
Ensembl chrNW_004955465:12,497,462...12,513,106 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004955543:452,172...484,564
Ensembl chrNW_004955543:452,121...484,560 		JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (PMID:22184727) UniProt PMID:22184727 NCBI chrNW_004955468:12,233,629...12,264,502 JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (MGI:5825383|PMID:28065600) UniProt PMID:28065600 MGI:5825383 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687 		JBrowse link
T-helper 2 cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISO (MGI:4456325|PMID:20421391), (MGI:5004732|PMID:21572431) UniProt PMID:20421391 PMID:21572431 MGI:4456325 MGI:5004732 NCBI chrNW_004955523:42,365...66,103
Ensembl chrNW_004955523:42,218...66,103 		JBrowse link
G Bcl3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:16081776) MGI PMID:16081776 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of ISO (PMID:12594267) MGI PMID:12594267 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Gata3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:20484083)
(PMID:20706986)		 UniProt
MGI		 PMID:20484083 PMID:20706986 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955493:5,546,340...5,580,745
Ensembl chrNW_004955493:5,545,944...5,582,422 		JBrowse link
G Il6 interleukin 6 acts_upstream_of ISO (PMID:12594267) MGI PMID:12594267 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (PMID:20484083) UniProt PMID:20484083 NCBI chrNW_004955412:19,586,435...19,670,149
Ensembl chrNW_004955412:19,586,141...19,665,527 		JBrowse link
G Men1 menin 1 involved_in ISO (PMID:20484083) UniProt PMID:20484083 NCBI chrNW_004955422:20,356,491...20,363,374
Ensembl chrNW_004955422:20,356,491...20,363,575 		JBrowse link
G Myb MYB proto-oncogene, transcription factor involved_in ISO (PMID:20484083) UniProt PMID:20484083 NCBI chrNW_004955439:1,523,516...1,560,185
Ensembl chrNW_004955439:1,521,292...1,560,220 		JBrowse link
T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8434133) MGI PMID:8434133 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:1673147) UniProt PMID:1673147 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Pdp2 pyruvate dehyrogenase phosphatase catalytic subunit 2 involved_in ISO (MGI:6200169|PMID:30150402) UniProt PMID:30150402 MGI:6200169 NCBI chrNW_004955433:23,392,193...23,396,229
Ensembl chrNW_004955433:23,392,193...23,396,229 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in ISO (MGI:4353445|PMID:19465928) UniProt PMID:19465928 MGI:4353445 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822 		JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (MGI:2686818|PMID:14691482) UniProt PMID:14691482 MGI:2686818 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:14670303) MGI PMID:14670303 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (PMID:14517551) MGI PMID:14517551 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (PMID:10383933) UniProt PMID:10383933 NCBI chrNW_004955538:3,421,685...3,433,829
Ensembl chrNW_004955538:3,421,685...3,433,842 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:9208839) MGI PMID:9208839 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
transitional one stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:19228876) MGI PMID:19228876 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO (PMID:17581616) MGI PMID:17581616 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
transitional two stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:20543113) MGI PMID:20543113 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12360
    immune system process 1980
      leukocyte activation 888
        lymphocyte activation 720
          B cell activation + 256
          T cell activation + 507
          establishment of lymphocyte polarity + 14
          immunological synapse formation + 18
          lymphocyte activation involved in immune response + 189
          lymphocyte differentiation + 394
          lymphocyte proliferation + 306
          natural killer cell activation + 74
          negative regulation of lymphocyte activation + 155
          positive regulation of lymphocyte activation + 275
          regulation of lymphocyte activation + 447
Path 2
Term Annotations click to browse term
  biological_process 12360
    cellular process 11484
      cell activation 1018
        leukocyte activation 888
          lymphocyte activation 720
            B cell activation + 256
            T cell activation + 507
            establishment of lymphocyte polarity + 14
            immunological synapse formation + 18
            lymphocyte activation involved in immune response + 189
            lymphocyte differentiation + 394
            lymphocyte proliferation + 306
            natural killer cell activation + 74
            negative regulation of lymphocyte activation + 155
            positive regulation of lymphocyte activation + 275
            regulation of lymphocyte activation + 447
paths to the root