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ONTOLOGY REPORT - ANNOTATIONS

Term:lymphocyte differentiation
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Accession:GO:0030098 term browser browse the term
Definition:The process in which a relatively unspecialized precursor cell acquires specialized features of a lymphocyte. A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:exact_synonym: lymphocyte cell differentiation;   lymphocytic blood cell differentiation
 related_synonym: lymphocyte development
 alt_id: GO:0046650

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lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta acts_upstream_of_or_within ISO (PMID:12434155) MGI PMID:12434155 NCBI chrNW_004955484:9,503,286...9,557,066
Ensembl chrNW_004955484:9,503,227...9,557,066 		JBrowse link
G Fbxo7 F-box protein 7 acts_upstream_of ISO (PMID:21652635) MGI PMID:21652635 NCBI chrNW_004955405:41,429,421...41,449,670
Ensembl chrNW_004955405:41,433,082...41,453,909 		JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:12387740) MGI PMID:12387740 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:12387740) MGI PMID:12387740 NCBI chrNW_004955559:1,364,056...1,371,245
Ensembl chrNW_004955559:1,365,938...1,370,002 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 involved_in ISO (PMID:17934067) UniProt PMID:17934067 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:23918385) MGI PMID:23918385 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Ly6d lymphocyte antigen 6 family member D involved_in ISO (PMID:19833765) UniProt PMID:19833765 NCBI chrNW_004955454:1,473,405...1,474,950
Ensembl chrNW_004955454:1,473,191...1,475,038 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8133891) MGI PMID:8133891 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO (PMID:26385063) UniProt PMID:26385063 NCBI chrNW_004955555:2,060,533...2,086,229
Ensembl chrNW_004955555:2,060,533...2,086,229 		JBrowse link
G Spi1 Spi-1 proto-oncogene acts_upstream_of_or_within ISO (PMID:11980719) MGI PMID:11980719 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) MGI PMID:18958875 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tox thymocyte selection associated high mobility group box acts_upstream_of_or_within ISO (PMID:20818394) MGI PMID:20818394 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955406:18,435,984...18,527,967
Ensembl chrNW_004955406:18,437,672...18,527,698 		JBrowse link
G Ada adenosine deaminase acts_upstream_of ISO (PMID:11067867), (PMID:12163459), (PMID:16670300)
(PMID:11067867), (PMID:16670300)		 MGI PMID:11067867 PMID:12163459 PMID:16670300 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Anxa1 annexin A1 involved_in ISO (PMID:20139728) BHF-UCL PMID:20139728 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:12717433) MGI PMID:12717433 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15855276) MGI PMID:15855276 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Prr7 proline rich 7, synaptic involved_in ISO (PMID:27657535) MGI PMID:27657535 NCBI chrNW_004955408:29,685,254...29,695,113
Ensembl chrNW_004955408:29,692,004...29,695,113 		JBrowse link
G Ptcra pre T cell antigen receptor alpha involved_in ISO (PMID:38422122) UniProt PMID:38422122 NCBI chrNW_004955437:8,920,997...8,927,354 JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
G Rpl22 ribosomal protein L22 acts_upstream_of_or_within ISO (PMID:17555992) MGI PMID:17555992 NCBI chrNW_004955486:6,302,092...6,310,789
Ensembl chrNW_004955486:6,302,092...6,310,789 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO (PMID:10981962) MGI PMID:10981962 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of ISO (PMID:9275205)
(PMID:7630421)
(PMID:9208839)		 MGI PMID:7630421 PMID:9208839 PMID:9275205 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A involved_in ISO (PMID:25398325) CACAO PMID:25398325 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase acts_upstream_of_or_within ISO (PMID:7680896) MGI PMID:7680896 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:20543113) MGI PMID:20543113 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17371977) BHF-UCL PMID:17371977 NCBI chrNW_004955487:5,180,241...5,218,298
Ensembl chrNW_004955487:5,180,252...5,218,216 		JBrowse link
G Adgrg3 adhesion G protein-coupled receptor G3 involved_in ISO (PMID:24113187) UniProt PMID:24113187 NCBI chrNW_004955433:15,290,538...15,317,020
Ensembl chrNW_004955433:15,290,394...15,319,361 		JBrowse link
G Aqp8 aquaporin 8 involved_in ISO (PMID:27256569) UniProt PMID:27256569 NCBI chrNW_004955493:3,550,697...3,558,875
Ensembl chrNW_004955493:3,550,120...3,559,206 		JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:12717432) MGI PMID:12717432 NCBI chrNW_004955424:23,233,523...23,330,679
Ensembl chrNW_004955424:23,233,523...23,330,679 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8170972), (PMID:9028316) MGI PMID:8170972 PMID:9028316 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:14647274) MGI PMID:14647274 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12818158) MGI PMID:12818158 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cd40lg CD40 ligand acts_upstream_of_or_within ISO (PMID:14647274) MGI PMID:14647274 NCBI chrNW_004955489:8,465,571...8,477,714
Ensembl chrNW_004955489:8,465,164...8,477,746 		JBrowse link
G Cd79a CD79a molecule involved_in ISO (PMID:11514602), (PMID:12097390) UniProt PMID:11514602 PMID:12097390 NCBI chrNW_004955555:961,522...965,605
Ensembl chrNW_004955555:961,522...965,605 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) UniProt PMID:15688343 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128 		JBrowse link
G Cebpg CCAAT enhancer binding protein gamma involved_in ISO (PMID:1431100) UniProt PMID:1431100 NCBI chrNW_004955468:3,137,106...3,141,733
Ensembl chrNW_004955468:3,137,106...3,141,733 		JBrowse link
G Clcf1 cardiotrophin like cytokine factor 1 acts_upstream_of_or_within ISO (PMID:10500198) MGI PMID:10500198 NCBI chrNW_004955422:18,097,779...18,108,628
Ensembl chrNW_004955422:18,097,779...18,108,628 		JBrowse link
G Cr2 complement C3d receptor 2 involved_in ISO (PMID:2995485) UniProt PMID:2995485 NCBI chrNW_004955406:42,877,041...42,910,970
Ensembl chrNW_004955406:42,876,966...42,911,564 		JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in ISO (PMID:22157821) UniProt PMID:22157821 NCBI chrNW_004955532:3,085,386...3,153,952
Ensembl chrNW_004955532:3,085,386...3,154,671 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO (PMID:12504013) MGI PMID:12504013 NCBI chrNW_004955429:19,461,446...19,501,908
Ensembl chrNW_004955429:19,461,528...19,505,321 		JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in ISO (PMID:25222125) UniProt PMID:25222125 NCBI chrNW_004955410:12,814,993...12,820,852
Ensembl chrNW_004955410:12,814,479...12,822,777 		JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO (PMID:18684867) MGI PMID:18684867 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:23531880) MGI PMID:23531880 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235 		JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 involved_in ISO (PMID:21228325) UniProt PMID:21228325 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand involved_in ISO (PMID:38701783) UniProt PMID:38701783 NCBI chrNW_004955559:1,364,056...1,371,245
Ensembl chrNW_004955559:1,365,938...1,370,002 		JBrowse link
G Fnip1 folliculin interacting protein 1 involved_in ISO (PMID:32905580) UniProt PMID:32905580 NCBI chrNW_004955408:3,117,258...3,238,223
Ensembl chrNW_004955408:3,117,277...3,238,223 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:28566276) MGI PMID:28566276 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180 		JBrowse link
G Fzd9 frizzled class receptor 9 acts_upstream_of_or_within ISO (PMID:15572594) MGI PMID:15572594 NCBI chrNW_004955456:14,245,994...14,247,551
Ensembl chrNW_004955456:14,246,324...14,247,550 		JBrowse link
G Gon4l gon-4 like acts_upstream_of_or_within ISO (PMID:20530203) MGI PMID:20530203 NCBI chrNW_004955545:1,990,202...2,054,614 JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (PMID:28039360) UniProt PMID:28039360 NCBI chrNW_004955467:9,600,829...9,604,148
Ensembl chrNW_004955467:9,600,829...9,603,606 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within
involved_in		 ISO (PMID:12522149) MGI
BHF-UCL		 PMID:12522149 NCBI chrNW_004955425:737,506...742,775
Ensembl chrNW_004955425:735,378...742,775 		JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:32341372) MGI PMID:32341372 NCBI chrNW_004955437:2,478,414...2,486,809
Ensembl chrNW_004955437:2,478,414...2,486,809 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:18523151) MGI PMID:18523151 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:23071339)
(PMID:7923373)		 MGI PMID:7923373 PMID:23071339 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:34155405) UniProt PMID:34155405 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:9252128) MGI PMID:9252128 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Il9 interleukin 9 acts_upstream_of_or_within ISO (PMID:30082831) MGI PMID:30082831 NCBI chrNW_004955408:30,950,816...30,953,571
Ensembl chrNW_004955408:30,950,816...30,953,571 		JBrowse link
G Il9r interleukin 9 receptor acts_upstream_of_or_within ISO (PMID:30082831) MGI PMID:30082831 NCBI chrNW_004955442:17,115,207...17,128,899
Ensembl chrNW_004955442:17,117,429...17,127,451 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (PMID:9498750) BHF-UCL PMID:9498750 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Lyl1 LYL1 basic helix-loop-helix family member involved_in ISO (PMID:16514064) UniProt PMID:16514064 NCBI chrNW_004955415:32,121,808...32,124,730
Ensembl chrNW_004955415:32,121,808...32,124,730 		JBrowse link
G Ms4a1 membrane spanning 4-domains A1 involved_in ISO (PMID:3925015) UniProt PMID:3925015 NCBI chrNW_004955511:5,252,934...5,263,961
Ensembl chrNW_004955511:5,258,341...5,267,113 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO (PMID:9697843) MGI PMID:9697843 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chrNW_004955505:729...64,653 JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:17927961) MGI PMID:17927961 NCBI chrNW_004955439:1,523,516...1,560,185
Ensembl chrNW_004955439:1,521,292...1,560,220 		JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 involved_in ISO (PMID:15143214) HGNC-UCL PMID:15143214 NCBI chrNW_004955413:27,865,672...27,893,793
Ensembl chrNW_004955413:27,866,271...27,893,844 		JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in ISO (PMID:16439204) UniProt PMID:16439204 NCBI chrNW_004955453:14,278,773...14,362,167
Ensembl chrNW_004955453:14,281,069...14,363,876 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO (PMID:12682228) MGI PMID:12682228 NCBI chrNW_004955507:5,454,871...5,457,247
Ensembl chrNW_004955507:5,455,087...5,457,660 		JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:15459109) MGI PMID:15459109 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579 		JBrowse link
G Onecut1 one cut homeobox 1 acts_upstream_of_or_within ISO (PMID:12874218) MGI PMID:12874218 NCBI chrNW_004955409:2,181,364...2,214,636
Ensembl chrNW_004955409:2,181,346...2,207,888 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within ISO (PMID:9988280) MGI PMID:9988280 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:10925250) UniProt PMID:10925250 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986 		JBrowse link
G Polm DNA polymerase mu acts_upstream_of_or_within ISO (PMID:15789338) MGI PMID:15789338 NCBI chrNW_004955456:7,886,182...7,893,800
Ensembl chrNW_004955456:7,886,291...7,895,085 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:9300691) MGI PMID:9300691 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:9271584) UniProt PMID:9271584 NCBI chrNW_004955402:771,410...846,671 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within
involved_in		 ISO (PMID:9254656)
(PMID:15557316), (PMID:18249142)
(PMID:12902479), (PMID:8666928)		 MGI
ARUK-UCL		 PMID:8666928 PMID:9254656 PMID:12902479 PMID:15557316 PMID:18249142 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J involved_in ISO (PMID:18249142) ARUK-UCL PMID:18249142 NCBI chrNW_004955422:396,266...438,792
Ensembl chrNW_004955422:399,357...443,054 		JBrowse link
G Rabl3 RAB, member of RAS oncogene family like 3 involved_in ISO (PMID:32220963) UniProt PMID:32220963 NCBI chrNW_004955427:20,204,901...20,242,242
Ensembl chrNW_004955427:20,204,901...20,242,242 		JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:11976687)
(PMID:1547488)		 MGI
UniProt		 PMID:1547488 PMID:11976687 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:11980719), (PMID:14595002)
(PMID:1547487), (PMID:1547488)		 MGI
UniProt		 PMID:1547487 PMID:1547488 PMID:11980719 PMID:14595002 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (PMID:11967543) MGI PMID:11967543 NCBI chrNW_004955443:18,783,061...19,029,441
Ensembl chrNW_004955443:18,783,061...18,910,228 		JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISO (PMID:25613378) UniProt PMID:25613378 NCBI chrNW_004955534:497,518...500,309
Ensembl chrNW_004955534:496,933...510,934 		JBrowse link
G Slc39a7 solute carrier family 39 member 7 involved_in ISO (PMID:30718914) UniProt PMID:30718914 NCBI chrNW_004955437:1,774,301...1,778,092
Ensembl chrNW_004955437:1,774,301...1,778,092 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chrNW_004955449:1,347,781...1,404,368 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO (PMID:10979977) MGI PMID:10979977 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO (PMID:10979977) MGI PMID:10979977 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of ISO (PMID:7477353)
(PMID:7477352)		 MGI PMID:7477352 PMID:7477353 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:15284856), (PMID:16797412)
(PMID:15294947)		 MGI PMID:15284856 PMID:15294947 PMID:16797412 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
G Tnfsf13b TNF superfamily member 13b involved_in
acts_upstream_of_or_within		 ISO (PMID:18624351)
(PMID:17581616)		 MGI PMID:17581616 PMID:18624351 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:31409799), (PMID:32128574) UniProt PMID:31409799 PMID:32128574 NCBI chrNW_004955430:17,457,603...17,523,115
Ensembl chrNW_004955430:17,457,603...17,507,012 		JBrowse link
G Tpd52 tumor protein D52 involved_in ISO (PMID:15576473) UniProt PMID:15576473 NCBI chrNW_004955444:1,230,730...1,261,839
Ensembl chrNW_004955444:1,230,730...1,264,526 		JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO (PMID:9300691) MGI PMID:9300691 NCBI chrNW_004955438:4,601,765...4,758,922
Ensembl chrNW_004955438:4,614,584...4,761,582 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23531880) MGI PMID:23531880 NCBI chrNW_004955438:21,341,374...21,377,674 JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within ISO (PMID:22201126) MGI PMID:22201126 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A involved_in ISO (PMID:17495164) UniProt PMID:17495164 NCBI chrNW_004955495:4,747,905...4,754,066
Ensembl chrNW_004955495:4,740,901...4,753,992 		JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Tcf3 transcription factor 3 involved_in ISO (PMID:15030778) UniProt PMID:15030778 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
B cell negative selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (PMID:16055554) MGI PMID:16055554 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:16055554) MGI PMID:16055554 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
B-1 B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd19 CD19 molecule involved_in ISO (PMID:7543183) UniProt PMID:7543183 NCBI chrNW_004955493:6,540,160...6,544,077 JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:14614861) MGI PMID:14614861 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slamf8 SLAM family member 8 involved_in ISO (PMID:11313408) UniProt PMID:11313408 NCBI chrNW_004955468:11,623,092...11,632,566
Ensembl chrNW_004955468:11,623,197...11,632,573 		JBrowse link
B-1a B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtm7 CKLF like MARVEL transmembrane domain containing 7 acts_upstream_of_or_within ISO (PMID:24080084) MGI PMID:24080084 NCBI chrNW_004955430:23,752,910...23,803,754
Ensembl chrNW_004955430:23,752,919...23,807,141 		JBrowse link
G Dpp4 dipeptidyl peptidase 4 ISO RGD PMID:19327106 RGD:41408336 NCBI chrNW_004955449:11,795,994...11,873,408
Ensembl chrNW_004955449:11,795,536...11,875,412 		JBrowse link
G Nfatc1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (PMID:14595020) MGI PMID:14595020 NCBI chrNW_004955402:62,558,392...62,674,347
Ensembl chrNW_004955402:62,558,286...62,674,457 		JBrowse link
G Plcl2 phospholipase C like 2 acts_upstream_of_or_within ISO (PMID:14517301) MGI PMID:14517301 NCBI chrNW_004955430:9,157,074...9,347,366
Ensembl chrNW_004955430:9,157,074...9,348,563 		JBrowse link
beta selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A involved_in ISO (PMID:25398325) CACAO PMID:25398325 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:9275205) MGI PMID:9275205 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:9275205) MGI PMID:9275205 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
CD4-positive or CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18228248) MGI PMID:18228248 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (PMID:16501569) MGI PMID:16501569 NCBI chrNW_004955433:8,788,867...8,845,925
Ensembl chrNW_004955433:8,788,655...8,845,925 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:17227833) BHF-UCL PMID:17227833 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO (PMID:28169274) MGI PMID:28169274 NCBI chrNW_004955493:8,295,868...8,302,638
Ensembl chrNW_004955493:8,295,868...8,304,520 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Cd83 CD83 molecule acts_upstream_of ISO (PMID:15322158) MGI PMID:15322158 NCBI chrNW_004955465:676,006...692,770
Ensembl chrNW_004955465:674,168...693,353 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:17028180) MGI PMID:17028180 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO (PMID:10926756) MGI PMID:10926756 NCBI chrNW_004955507:5,454,871...5,457,247
Ensembl chrNW_004955507:5,455,087...5,457,660 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO (PMID:16093716) MGI PMID:16093716 NCBI chrNW_004955415:29,413,253...29,420,682
Ensembl chrNW_004955415:29,413,253...29,420,682 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in ISO (PMID:19047684) UniProt PMID:19047684 NCBI chrNW_004955487:1,988,226...2,001,731
Ensembl chrNW_004955487:1,987,405...2,001,731 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941) MGI PMID:10716941 NCBI chrNW_004955430:10,587,539...10,683,887
Ensembl chrNW_004955430:10,587,539...10,683,887 		JBrowse link
CD4-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection associated high mobility group box involved_in ISO (PMID:18195075) UniProt PMID:18195075 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in
acts_upstream_of		 ISO (PMID:22079196)
(PMID:16275384)
(PMID:16301745), (PMID:18573908)		 CACAO
MGI		 PMID:16275384 PMID:16301745 PMID:18573908 PMID:22079196 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Fut7 fucosyltransferase 7 acts_upstream_of_or_within ISO (PMID:18573908) MGI PMID:18573908 NCBI chrNW_004955513:5,056,718...5,061,974 JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842 		JBrowse link
G Pla2g2d phospholipase A2 group IID acts_upstream_of_or_within ISO (PMID:19564598) MGI PMID:19564598 NCBI chrNW_004955452:738,133...743,718
Ensembl chrNW_004955452:736,600...743,806 		JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection associated high mobility group box involved_in ISO (PMID:18195075) UniProt PMID:18195075 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
CD8-positive, alpha-beta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO (PMID:25348153) MGI PMID:25348153 NCBI chrNW_004955404:11,293,897...11,321,072
Ensembl chrNW_004955404:11,293,897...11,321,072 		JBrowse link
CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf1 interferon regulatory factor 1 acts_upstream_of_or_within ISO (PMID:11359801) MGI PMID:11359801 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004955543:452,172...484,564
Ensembl chrNW_004955543:452,121...484,560 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO (PMID:16093716) MGI PMID:16093716 NCBI chrNW_004955415:29,413,253...29,420,682
Ensembl chrNW_004955415:29,413,253...29,420,682 		JBrowse link
G Psmb11 proteasome subunit beta 11 acts_upstream_of_or_within ISO (PMID:17540904)
(PMID:31915251)		 MGI PMID:17540904 PMID:31915251 NCBI chrNW_004955409:37,260,080...37,260,866 JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941), (PMID:15814699) MGI PMID:10716941 PMID:15814699 NCBI chrNW_004955430:10,587,539...10,683,887
Ensembl chrNW_004955430:10,587,539...10,683,887 		JBrowse link
G Tnfsf8 TNF superfamily member 8 acts_upstream_of_or_within ISO (PMID:16177108) MGI PMID:16177108 NCBI chrNW_004955419:12,763,343...12,790,044
Ensembl chrNW_004955419:12,762,748...12,788,117 		JBrowse link
CD8-positive, alpha-beta T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in ISO (PMID:17566017)
(PMID:14605368)		 UniProt PMID:14605368 PMID:17566017 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:17277142) MGI PMID:17277142 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8170972) MGI PMID:8170972 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (PMID:11850626), (PMID:15078895) UniProt PMID:11850626 PMID:15078895 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 C-C motif chemokine receptor 9 acts_upstream_of_or_within ISO (PMID:25348153) MGI PMID:25348153 NCBI chrNW_004955420:26,083,445...26,093,740
Ensembl chrNW_004955420:26,083,040...26,093,775 		JBrowse link
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO (PMID:25348153) MGI PMID:25348153 NCBI chrNW_004955404:11,293,897...11,321,072
Ensembl chrNW_004955404:11,293,897...11,321,072 		JBrowse link
cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd8a CD8 subunit alpha acts_upstream_of_or_within ISO (PMID:1673361) MGI PMID:1673361 NCBI chrNW_004955424:952,595...979,159
Ensembl chrNW_004955424:952,502...978,636 		JBrowse link
DN2 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO (PMID:24638065) UniProt PMID:24638065 NCBI chrNW_004955439:14,921,524...14,949,493
Ensembl chrNW_004955439:14,920,601...14,924,191 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (PMID:10911993), (PMID:9823897) MGI PMID:9823897 PMID:10911993 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264 		JBrowse link
DN3 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO (PMID:24638065) UniProt PMID:24638065 NCBI chrNW_004955439:14,921,524...14,949,493
Ensembl chrNW_004955439:14,920,601...14,924,191 		JBrowse link
DN4 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chrNW_004955406:18,435,984...18,527,967
Ensembl chrNW_004955406:18,437,672...18,527,698 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 involved_in ISO (PMID:17579027) UniProt PMID:17579027 NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680 		JBrowse link
extrathymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:10704459) MGI PMID:10704459 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf8 interferon regulatory factor 8 involved_in ISO (PMID:31000603) ARUK-UCL PMID:31000603 NCBI chrNW_004955541:973,004...988,493
Ensembl chrNW_004955541:973,022...990,106 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chrNW_004955505:729...64,653 JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (PMID:12928432) MGI PMID:12928432 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:31000603) ARUK-UCL PMID:31000603 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (PMID:10383933) UniProt PMID:10383933 NCBI chrNW_004955538:3,421,685...3,433,829
Ensembl chrNW_004955538:3,421,685...3,433,842 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of ISO (PMID:7807014) MGI PMID:7807014 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of ISO (PMID:7807014) MGI PMID:7807014 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Sox13 SRY-box transcription factor 13 involved_in ISO (PMID:17218525), (PMID:30413363) UniProt PMID:17218525 PMID:30413363 NCBI chrNW_004955406:39,959,458...39,994,214
Ensembl chrNW_004955406:39,966,055...39,994,214 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of ISO (PMID:7477352)
(PMID:8790395)		 MGI PMID:7477352 PMID:8790395 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Tcf7 transcription factor 7 involved_in ISO (PMID:30413363) UniProt PMID:30413363 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527 		JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:14607964) MGI PMID:14607964 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) UniProt PMID:15688343 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128 		JBrowse link
G Il21 interleukin 21 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO (PMID:31000603) ARUK-UCL PMID:31000603 NCBI chrNW_004955541:973,004...988,493
Ensembl chrNW_004955541:973,022...990,106 		JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 acts_upstream_of_or_within ISO (PMID:23997217) MGI PMID:23997217 NCBI chrNW_004955429:18,356,642...18,372,928
Ensembl chrNW_004955429:18,356,642...18,372,928 		JBrowse link
G Phf14 PHD finger protein 14 involved_in ISO (PMID:33035772) UniProt PMID:33035772 NCBI chrNW_004955432:17,535,222...17,807,106
Ensembl chrNW_004955432:17,535,224...17,697,936 		JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chrNW_004955412:13,131,229...13,167,150
Ensembl chrNW_004955412:13,131,168...13,156,128 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:31000603) ARUK-UCL PMID:31000603 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
immature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fnip1 folliculin interacting protein 1 acts_upstream_of_or_within ISO (PMID:22608497) MGI PMID:22608497 NCBI chrNW_004955408:3,117,258...3,238,223
Ensembl chrNW_004955408:3,117,277...3,238,223 		JBrowse link
G Irf2bp2 interferon regulatory factor 2 binding protein 2 involved_in ISO (PMID:27016798) UniProt PMID:27016798 NCBI chrNW_004955492:4,889,878...4,895,508
Ensembl chrNW_004955492:4,889,878...4,894,325 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase involved_in ISO (PMID:15067126) UniProt PMID:15067126 NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:28062693) ARUK-UCL PMID:28062693 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
G Spib Spi-B transcription factor involved_in ISO (PMID:28062693) ARUK-UCL PMID:28062693 NCBI chrNW_004955559:705,809...711,407
Ensembl chrNW_004955559:705,809...711,407 		JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (PMID:29907570) UniProt PMID:29907570 NCBI chrNW_004955422:20,067,933...20,074,947
Ensembl chrNW_004955422:20,068,848...20,073,850 		JBrowse link
immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of ISO (PMID:23487419) MGI PMID:23487419 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of ISO (PMID:16230479) MGI PMID:16230479 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:16230479) MGI PMID:16230479 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Ifnar2 interferon alpha and beta receptor subunit 2 acts_upstream_of_or_within ISO (PMID:11154225) MGI PMID:11154225 NCBI chrNW_004955407:32,601,862...32,637,852
Ensembl chrNW_004955407:32,601,826...32,638,564 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO (PMID:18617424) MGI PMID:18617424 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989 		JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:9009202) MGI PMID:9009202 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) UniProt PMID:15688343 NCBI chrNW_004955417:10,370,606...10,441,008
Ensembl chrNW_004955417:10,370,471...10,441,128 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:15146182), (PMID:19217325) UniProt PMID:15146182 PMID:19217325 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604 		JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (PMID:25729399) UniProt PMID:25729399 NCBI chrNW_004955453:9,229,535...9,424,570
Ensembl chrNW_004955453:9,264,666...9,424,570 		JBrowse link
G Dock11 dedicator of cytokinesis 11 involved_in ISO (PMID:25729399) UniProt PMID:25729399 NCBI chrNW_004955534:1,239,241...1,431,714
Ensembl chrNW_004955534:1,239,247...1,431,714 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512 		JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chrNW_004955413:23,901,987...23,917,720
Ensembl chrNW_004955413:23,902,707...23,917,542 		JBrowse link
G Notch2 notch receptor 2 involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (PMID:10881171) UniProt PMID:10881171 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225 		JBrowse link
mature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:23918385) MGI PMID:23918385 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Pou2f2 POU class 2 homeobox 2 acts_upstream_of_or_within ISO (PMID:8096198) MGI PMID:8096198 NCBI chrNW_004955555:759,308...793,500
Ensembl chrNW_004955555:759,308...793,485 		JBrowse link
mature B cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH17orf99 chromosome unknown C17orf99 homolog involved_in ISO (PMID:28978694) UniProt PMID:28978694 NCBI chrNW_004955506:4,397,221...4,408,645 JBrowse link
G Gpr183 G protein-coupled receptor 183 involved_in ISO (PMID:19597478) UniProt PMID:19597478 NCBI chrNW_004955404:11,264,954...11,277,531
Ensembl chrNW_004955404:11,264,954...11,277,531 		JBrowse link
G Rag2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
memory B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:10755614) UniProt PMID:10755614 NCBI chrNW_004955461:7,960,901...8,036,221
Ensembl chrNW_004955461:7,960,690...7,976,183 		JBrowse link
memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO (PMID:25271321) MGI PMID:25271321 NCBI chrNW_004955513:2,197,037...2,244,992
Ensembl chrNW_004955513:2,197,037...2,244,992 		JBrowse link
natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:16751775) MGI PMID:16751775 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of
involved_in		 ISO (PMID:14607906)
(PMID:38701783)		 MGI
UniProt		 PMID:14607906 PMID:38701783 NCBI chrNW_004955559:1,364,056...1,371,245
Ensembl chrNW_004955559:1,365,938...1,370,002 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:24855001) MGI PMID:24855001 NCBI chrNW_004955409:29,373,572...29,470,623
Ensembl chrNW_004955409:29,373,572...29,470,623 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791 		JBrowse link
G Il11ra interleukin 11 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:15499555) MGI PMID:15499555 NCBI chrNW_004955472:1,474,802...1,485,352
Ensembl chrNW_004955472:1,475,178...1,482,206 		JBrowse link
G Il15 interleukin 15 acts_upstream_of ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Il15ra interleukin 15 receptor subunit alpha acts_upstream_of ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955421:22,590,168...22,612,835
Ensembl chrNW_004955421:22,586,012...22,620,788 		JBrowse link
G Il21 interleukin 21 acts_upstream_of ISO (PMID:14764669) MGI PMID:14764669 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (PMID:27733580) UniProt PMID:27733580 NCBI chrNW_004955451:11,770,201...11,802,992
Ensembl chrNW_004955451:11,770,201...11,802,992 		JBrowse link
G Kctd9 potassium channel tetramerization domain containing 9 acts_upstream_of_or_within ISO (PMID:31024568) MGI PMID:31024568 NCBI chrNW_004955403:48,349,349...48,373,903
Ensembl chrNW_004955403:48,349,354...48,373,903 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within ISO (PMID:16751775) MGI PMID:16751775 NCBI chrNW_004955470:2,065,468...2,167,909
Ensembl chrNW_004955470:2,065,411...2,167,909 		JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in ISO (PMID:32190943) UniProt PMID:32190943 NCBI chrNW_004955515:908,313...910,159
Ensembl chrNW_004955515:908,477...909,868 		JBrowse link
G Pbx1 PBX homeobox 1 involved_in ISO (PMID:32190943) UniProt PMID:32190943 NCBI chrNW_004955462:11,777,168...12,083,068
Ensembl chrNW_004955462:11,812,649...12,082,316 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in ISO (PMID:15557316) ARUK-UCL PMID:15557316 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Rabl3 RAB, member of RAS oncogene family like 3 involved_in ISO (PMID:32220963) UniProt PMID:32220963 NCBI chrNW_004955427:20,204,901...20,242,242
Ensembl chrNW_004955427:20,204,901...20,242,242 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:18031695) UniProt PMID:18031695 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (PMID:18031695) UniProt PMID:18031695 NCBI chrNW_004955468:12,233,629...12,264,502 JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chrNW_004955449:1,347,781...1,404,368 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:9841920)
(PMID:10072077)		 MGI PMID:9841920 PMID:10072077 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:9841920)
(PMID:10072077)		 MGI PMID:9841920 PMID:10072077 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (PMID:21126536) UniProt PMID:21126536 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO (PMID:17318811) MGI PMID:17318811 NCBI chrNW_004955532:2,128,430...2,131,235
Ensembl chrNW_004955532:2,128,430...2,131,235 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within ISO (PMID:16751775) MGI PMID:16751775 NCBI chrNW_004955416:8,361,722...8,377,629
Ensembl chrNW_004955416:8,359,207...8,377,692 		JBrowse link
G Znf683 zinc finger protein 683 acts_upstream_of_or_within ISO (PMID:22885984) MGI PMID:22885984 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
negative regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 involved_in ISO (PMID:19667090) BHF-UCL PMID:19667090 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) BHF-UCL PMID:19109233 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10981962) MGI PMID:10981962 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
negative regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:16618805) MGI PMID:16618805 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Hmgb3 high mobility group box 3 acts_upstream_of_or_within ISO (PMID:12714519) MGI PMID:12714519 NCBI chrNW_004955498:6,633,540...6,640,393
Ensembl chrNW_004955498:6,633,336...6,640,459 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:18523151) MGI PMID:18523151 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in ISO (PMID:18941195) UniProt PMID:18941195 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514 		JBrowse link
negative regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chrNW_004955484:9,503,286...9,557,066
Ensembl chrNW_004955484:9,503,227...9,557,066 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:22473704) UniProt PMID:22473704 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chrNW_004955452:4,580,444...4,606,820
Ensembl chrNW_004955452:4,579,331...4,636,884 		JBrowse link
negative regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (PMID:24515893) UniProt PMID:24515893 NCBI chrNW_004955491:5,498,472...5,513,389
Ensembl chrNW_004955491:5,499,033...5,517,319 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (PMID:24880459) UniProt PMID:24880459 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (PMID:22730529), (PMID:24880459) UniProt PMID:22730529 PMID:24880459 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
negative regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:12421925) BHF-UCL PMID:12421925 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of_or_within ISO (PMID:23487419) MGI PMID:23487419 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:16230479) MGI PMID:16230479 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) BHF-UCL PMID:19109233 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Tmem131l transmembrane 131 like involved_in ISO (PMID:23690469) UniProt PMID:23690469 NCBI chrNW_004955471:7,797,687...7,952,265
Ensembl chrNW_004955471:7,797,780...7,952,131 		JBrowse link
negative regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo7 F-box protein 7 acts_upstream_of_or_within ISO (PMID:21652635) MGI PMID:21652635 NCBI chrNW_004955405:41,429,421...41,449,670
Ensembl chrNW_004955405:41,433,082...41,453,909 		JBrowse link
negative regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen like 2 acts_upstream_of_or_within ISO (PMID:29341118) MGI PMID:29341118 NCBI chrNW_004955410:7,899,263...7,903,499
Ensembl chrNW_004955410:7,899,309...7,902,722 		JBrowse link
negative regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pglyrp1 peptidoglycan recognition protein 1 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955495:7,785,398...7,792,158
Ensembl chrNW_004955495:7,785,193...7,796,210 		JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chrNW_004955592:100,022...111,609
Ensembl chrNW_004955592:100,088...111,610 		JBrowse link
negative regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:15240705) MGI PMID:15240705 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
negative regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:22080863) UniProt PMID:22080863 NCBI chrNW_004955402:771,410...846,671 JBrowse link
negative regulation of pre-B cell receptor expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:22949502) ARUK-UCL PMID:22949502 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
negative regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 involved_in ISO (PMID:18641304) BHF-UCL PMID:18641304 NCBI chrNW_004955457:11,028,707...11,034,898
Ensembl chrNW_004955457:11,028,698...11,073,460 		JBrowse link
G Hspb1 heat shock protein family B (small) member 1 ISO RGD PMID:30287503 RGD:38549580 NCBI chrNW_004955844:8,094...9,565
Ensembl chrNW_004955844:7,790...10,004 		JBrowse link
G Irf1 interferon regulatory factor 1 involved_in ISO (PMID:18641303) UniProt PMID:18641303 NCBI chrNW_004955408:3,882,282...3,887,965
Ensembl chrNW_004955408:3,880,155...3,887,973 		JBrowse link
G Lag3 lymphocyte activating 3 involved_in ISO (PMID:15485628) UniProt PMID:15485628 NCBI chrNW_004955413:4,379,529...4,385,456
Ensembl chrNW_004955413:4,378,972...4,385,909 		JBrowse link
G Mdk midkine involved_in ISO (PMID:22323540) UniProt PMID:22323540 NCBI chrNW_004955422:1,655,351...1,657,026
Ensembl chrNW_004955422:1,655,358...1,657,044 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:18713990) BHF-UCL PMID:18713990 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
negative regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (PMID:7679955) MGI PMID:7679955 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:12794108) MGI PMID:12794108 NCBI chrNW_004955482:9,416,456...9,447,265
Ensembl chrNW_004955482:9,417,116...9,446,239 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO (PMID:16290204) MGI PMID:16290204 NCBI chrNW_004955415:31,880,801...31,884,453
Ensembl chrNW_004955415:31,880,588...31,884,778 		JBrowse link
negative regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:12421925) BHF-UCL PMID:12421925 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (PMID:16339515) BHF-UCL PMID:16339515 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) BHF-UCL PMID:19109233 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Nfkbid NFKB inhibitor delta acts_upstream_of_or_within ISO (PMID:11931770) MGI PMID:11931770 NCBI chrNW_004955468:2,680,934...2,688,797
Ensembl chrNW_004955468:2,680,806...2,689,155 		JBrowse link
G Rag2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10981962) MGI PMID:10981962 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Zc3h8 zinc finger CCCH-type containing 8 involved_in ISO (PMID:12153508) UniProt PMID:12153508 NCBI chrNW_004955470:1,888,903...1,913,077
Ensembl chrNW_004955470:1,888,871...1,916,581 		JBrowse link
negative regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) UniProt PMID:24463518 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955493:5,546,340...5,580,745
Ensembl chrNW_004955493:5,545,944...5,582,422 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (PMID:16020505) BHF-UCL PMID:16020505 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:9670042) BHF-UCL PMID:9670042 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
negative regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) UniProt PMID:24463518 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:23169781) UniProt PMID:23169781 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il2 interleukin 2 involved_in ISO (PMID:25642768) BHF-UCL PMID:25642768 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:18792410) MGI PMID:18792410 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chrNW_004955419:5,054,288...5,103,926
Ensembl chrNW_004955419:5,054,289...5,103,926 		JBrowse link
G Smad7 SMAD family member 7 involved_in ISO (PMID:25642768) BHF-UCL PMID:25642768 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:21151104) UniProt PMID:21151104 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (PMID:23034280) MGI PMID:23034280 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
negative regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd69 CD69 molecule involved_in ISO (PMID:24752896) UniProt PMID:24752896 NCBI chrNW_004955413:5,579,037...5,586,238
Ensembl chrNW_004955413:5,579,072...5,587,491 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (PMID:20696842) UniProt PMID:20696842 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643 		JBrowse link
G Lgals1 galectin 1 involved_in ISO (PMID:24752896) UniProt PMID:24752896 NCBI chrNW_004955413:24,072,086...24,075,452
Ensembl chrNW_004955413:24,072,086...24,075,452 		JBrowse link
G Loxl3 lysyl oxidase like 3 involved_in ISO (PMID:28065600) UniProt PMID:28065600 NCBI chrNW_004955424:11,236,415...11,255,801
Ensembl chrNW_004955424:11,236,836...11,259,570 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A involved_in ISO (PMID:20696842) UniProt PMID:20696842 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:21151104) UniProt PMID:21151104 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
G Tnfsf18 TNF superfamily member 18 involved_in ISO (PMID:24107315) UniProt PMID:24107315 NCBI chrNW_004955406:13,391,162...13,402,479 JBrowse link
negative regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in ISO (PMID:17008549) UniProt PMID:17008549 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) UniProt PMID:24463518 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:12594267) MGI PMID:12594267 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:12242343) UniProt PMID:12242343 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389 		JBrowse link
negative regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within ISO (PMID:15917799) MGI PMID:15917799 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
negative T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Themis thymocyte selection associated involved_in ISO (PMID:19597498), (PMID:19597499) UniProt PMID:19597498 PMID:19597499 NCBI chrNW_004955436:8,743,835...8,909,040 JBrowse link
negative thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aire autoimmune regulator acts_upstream_of_or_within ISO (PMID:23382543) MGI PMID:23382543 NCBI chrNW_004955407:41,157,503...41,165,032
Ensembl chrNW_004955407:41,157,484...41,165,014 		JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO (PMID:23382543) MGI PMID:23382543 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827 		JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (PMID:17785582) BHF-UCL PMID:17785582 NCBI chrNW_004955451:15,086,119...15,101,862
Ensembl chrNW_004955451:15,086,119...15,095,561 		JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (PMID:7630421) MGI PMID:7630421 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (PMID:7679955) MGI PMID:7679955 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in ISO (PMID:19667090) BHF-UCL PMID:19667090 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Mink1 misshapen like kinase 1 acts_upstream_of_or_within ISO (PMID:15608642) MGI PMID:15608642 NCBI chrNW_004955467:10,256,722...10,312,011
Ensembl chrNW_004955467:10,256,434...10,313,834 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:8666928) MGI PMID:8666928 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:17227833) BHF-UCL PMID:17227833 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:7630421) MGI PMID:7630421 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO (PMID:16223777) MGI PMID:16223777 NCBI chrNW_004955449:332,563...411,218
Ensembl chrNW_004955449:338,193...411,218 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:19620306) MGI PMID:19620306 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180 		JBrowse link
G Itk IL2 inducible T cell kinase acts_upstream_of_or_within ISO (PMID:18292523) MGI PMID:18292523 NCBI chrNW_004955408:11,387,595...11,447,896
Ensembl chrNW_004955408:11,387,589...11,448,199 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
G Stk17a serine/threonine kinase 17a involved_in ISO (PMID:26423156) MGI PMID:26423156 NCBI chrNW_004955460:288,335...307,033
Ensembl chrNW_004955460:288,843...307,386 		JBrowse link
G Txk TXK tyrosine kinase acts_upstream_of_or_within ISO (PMID:18292523) MGI PMID:18292523 NCBI chrNW_004955443:474,099...556,697
Ensembl chrNW_004955443:474,099...556,697 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (PMID:23105140) UniProt PMID:23105140 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
G Znf683 zinc finger protein 683 acts_upstream_of_or_within ISO (PMID:22885984) MGI PMID:22885984 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
NK T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kctd9 potassium channel tetramerization domain containing 9 acts_upstream_of_or_within ISO (PMID:31024568) MGI PMID:31024568 NCBI chrNW_004955403:48,349,349...48,373,903
Ensembl chrNW_004955403:48,349,354...48,373,903 		JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (PMID:18195075) UniProt PMID:18195075 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of ISO (PMID:15240705) MGI PMID:15240705 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29259245) MGI PMID:29259245 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359 		JBrowse link
G Itm2a integral membrane protein 2A acts_upstream_of_or_within ISO (PMID:24831988) MGI PMID:24831988 NCBI chrNW_004955557:2,235,223...2,243,911
Ensembl chrNW_004955557:2,235,223...2,243,927 		JBrowse link
G Lgals1 galectin 1 acts_upstream_of_or_within ISO (PMID:21753146) MGI PMID:21753146 NCBI chrNW_004955413:24,072,086...24,075,452
Ensembl chrNW_004955413:24,072,086...24,075,452 		JBrowse link
G Lgals8 galectin 8 acts_upstream_of_or_within ISO (PMID:21753146) MGI PMID:21753146 NCBI chrNW_004955492:3,673,233...3,693,777
Ensembl chrNW_004955492:3,673,233...3,693,776 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:25124037) MGI PMID:25124037 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO (PMID:10926756) MGI PMID:10926756 NCBI chrNW_004955507:5,454,871...5,457,247
Ensembl chrNW_004955507:5,455,087...5,457,660 		JBrowse link
positive regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:11067867), (PMID:16670300)
(PMID:11067867), (PMID:12163459), (PMID:16670300)		 MGI PMID:11067867 PMID:12163459 PMID:16670300 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in ISO (PMID:15855276) BHF-UCL PMID:15855276 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) BHF-UCL PMID:19109233 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (PMID:15064401) MGI PMID:15064401 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180 		JBrowse link
G Nkap NFKB activating protein involved_in ISO (PMID:19409814) UniProt PMID:19409814 NCBI chrNW_004955534:106,122...119,508
Ensembl chrNW_004955534:106,122...119,344 		JBrowse link
G Pnp purine nucleoside phosphorylase acts_upstream_of_or_within ISO (PMID:16964310) MGI PMID:16964310 NCBI chrNW_004955550:1,290,816...1,299,553
Ensembl chrNW_004955550:1,290,244...1,298,068 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:25398325) CACAO PMID:25398325 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:14764698) BHF-UCL PMID:14764698 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:9275205) MGI PMID:9275205 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:7630421)
(PMID:9208839)
(PMID:9275205)		 MGI PMID:7630421 PMID:9208839 PMID:9275205 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
positive regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (PMID:21423173) UniProt PMID:21423173 NCBI chrNW_004955489:5,394,553...5,567,295
Ensembl chrNW_004955489:5,394,357...5,567,405 		JBrowse link
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (PMID:12431371) MGI PMID:12431371 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO (PMID:9252128)
(PMID:23918385)		 MGI PMID:9252128 PMID:23918385 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:16797412) MGI PMID:16797412 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within ISO (PMID:10704460), (PMID:9620849) MGI PMID:9620849 PMID:10704460 NCBI chrNW_004955453:2,938,659...3,037,211
Ensembl chrNW_004955453:2,938,659...3,037,211 		JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISO (PMID:21572390) UniProt PMID:21572390 NCBI chrNW_004955409:37,438,924...37,448,704
Ensembl chrNW_004955409:37,440,541...37,448,437 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (PMID:20870947) UniProt PMID:20870947 NCBI chrNW_004955404:618,092...639,424
Ensembl chrNW_004955404:618,092...639,704 		JBrowse link
G Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma acts_upstream_of_or_within ISO (PMID:16129705) MGI PMID:16129705 NCBI chrNW_004955409:25,920,973...25,943,985 JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:33951726) UniProt PMID:33951726 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:10979977) MGI PMID:10979977 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:10979977) MGI PMID:10979977 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 ISO (PMID:18369315)
(PMID:7477353)
(PMID:7477352)		 CACAO
MGI		 PMID:7477352 PMID:7477353 PMID:18369315 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
positive regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd83 CD83 molecule acts_upstream_of_or_within ISO (PMID:15322158) MGI PMID:15322158 NCBI chrNW_004955465:676,006...692,770
Ensembl chrNW_004955465:674,168...693,353 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:17028180) MGI PMID:17028180 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within ISO (PMID:16227612) MGI PMID:16227612 NCBI chrNW_004955473:5,224,635...5,237,066
Ensembl chrNW_004955473:5,222,408...5,237,260 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (PMID:24880459) UniProt PMID:24880459 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20639485) BHF-UCL PMID:20639485 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (PMID:24880459) UniProt PMID:24880459 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16275384)
(PMID:12612578)
(PMID:16301745), (PMID:18573908)		 MGI PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO (PMID:16227984) MGI PMID:16227984 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Klhl25 kelch like family member 25 involved_in ISO (PMID:34491895) UniProt PMID:34491895 NCBI chrNW_004955416:18,965,966...18,991,099 JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:28467828) UniProt PMID:28467828 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802 		JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma involved_in ISO (PMID:20209097) UniProt PMID:20209097 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:20209097) UniProt PMID:20209097 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
positive regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chrNW_004955484:9,503,286...9,557,066
Ensembl chrNW_004955484:9,503,227...9,557,066 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chrNW_004955452:4,580,444...4,606,820
Ensembl chrNW_004955452:4,579,331...4,636,884 		JBrowse link
positive regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in ISO (PMID:10209962) UniProt PMID:10209962 NCBI chrNW_004955422:19,360,641...19,370,623
Ensembl chrNW_004955422:19,360,641...19,371,105 		JBrowse link
G Tnfsf9 TNF superfamily member 9 ISO RGD PMID:19187795 RGD:2317344 NCBI chrNW_004955495:3,101,965...3,107,552 JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:7807014) MGI PMID:7807014 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:23562159) UniProt PMID:23562159 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:7807014) MGI PMID:7807014 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Sox13 SRY-box transcription factor 13 involved_in ISO (PMID:23562159) UniProt PMID:23562159 NCBI chrNW_004955406:39,959,458...39,994,214
Ensembl chrNW_004955406:39,966,055...39,994,214 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:23562159) UniProt PMID:23562159 NCBI chrNW_004955483:5,076,664...5,077,059 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:8790395)
(PMID:7477352)		 MGI PMID:7477352 PMID:8790395 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
positive regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in ISO (PMID:15964995) HGNC-UCL PMID:15964995 NCBI chrNW_004955429:6,548,586...6,553,730
Ensembl chrNW_004955429:6,547,731...6,558,105 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16230479) MGI PMID:16230479 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:8590311 RGD:7401228 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:14764698), (PMID:19273836) BHF-UCL PMID:14764698 PMID:19273836 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
positive regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within ISO (PMID:9620849) MGI PMID:9620849 NCBI chrNW_004955453:2,938,659...3,037,211
Ensembl chrNW_004955453:2,938,659...3,037,211 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chrNW_004955458:1,733,799...1,785,591
Ensembl chrNW_004955458:1,733,883...1,784,182 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:32103174) UniProt PMID:32103174 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:32103174) UniProt PMID:32103174 NCBI chrNW_004955413:27,135,785...27,158,344
Ensembl chrNW_004955413:27,135,805...27,159,750 		JBrowse link
positive regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chrNW_004955406:43,002,817...43,034,555 JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:14688363) BHF-UCL PMID:14688363 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:27591323) UniProt PMID:27591323 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in ISO (PMID:29230018) UniProt PMID:29230018 NCBI chrNW_004955445:1,909,012...1,914,032
Ensembl chrNW_004955445:1,908,946...1,915,002 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:18713990) BHF-UCL PMID:18713990 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase involved_in ISO (PMID:18840707) UniProt PMID:18840707 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955559:1,364,056...1,371,245
Ensembl chrNW_004955559:1,365,938...1,370,002 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:18840707) UniProt PMID:18840707 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809 		JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:14607906)
(PMID:17318811)		 MGI PMID:14607906 PMID:17318811 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Il15ra interleukin 15 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chrNW_004955421:22,590,168...22,612,835
Ensembl chrNW_004955421:22,586,012...22,620,788 		JBrowse link
G Il21 interleukin 21 acts_upstream_of_or_within ISO (PMID:14764669) MGI PMID:14764669 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:21957144) CACAO PMID:21957144 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:9841920) MGI PMID:9841920 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:9841920) MGI PMID:9841920 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Tox thymocyte selection associated high mobility group box acts_upstream_of_or_within ISO (PMID:20818394) MGI PMID:20818394 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:22753936) UniProt PMID:22753936 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
positive regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO (PMID:14557411) MGI PMID:14557411 NCBI chrNW_004955425:22,792,616...23,051,509
Ensembl chrNW_004955425:22,792,616...23,051,737 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO (PMID:14557411) MGI PMID:14557411 NCBI chrNW_004955495:5,972,177...6,012,525
Ensembl chrNW_004955495:5,972,433...6,012,433 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:16973387) MGI PMID:16973387 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837 		JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:30842412) UniProt PMID:30842412 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856 		JBrowse link
G Il10 interleukin 10 acts_upstream_of ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
positive regulation of pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:22753936) UniProt PMID:22753936 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
positive regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30513302) UniProt PMID:30513302 NCBI chrNW_004955422:1,455,392...1,644,368
Ensembl chrNW_004955422:1,455,380...1,644,452 		JBrowse link
G Bcl6 BCL6 transcription repressor involved_in ISO (PMID:20935202), (PMID:22387553) BHF-UCL PMID:20935202 PMID:22387553 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004955484:9,025,409...9,037,942
Ensembl chrNW_004955484:9,025,460...9,037,580 		JBrowse link
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chrNW_004955406:43,002,817...43,034,555 JBrowse link
G Dusp10 dual specificity phosphatase 10 involved_in ISO (PMID:22387553) BHF-UCL PMID:22387553 NCBI chrNW_004955520:2,338,548...2,371,591
Ensembl chrNW_004955520:2,339,521...2,372,400 		JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (PMID:30513302) UniProt PMID:30513302 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:30513302)
(PMID:12522256), (PMID:15100250), (PMID:16769892), (PMID:17028180)
(PMID:15780990)		 UniProt
MGI		 PMID:12522256 PMID:15100250 PMID:15780990 PMID:16769892 PMID:17028180 More... NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Il2 interleukin 2 ISO RGD PMID:6233372 RGD:1600097 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:25778793) UniProt PMID:25778793 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:24835996) UniProt PMID:24835996 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (PMID:22387553) BHF-UCL PMID:22387553 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109 		JBrowse link
G Sox12 SRY-box transcription factor 12 involved_in ISO (PMID:30190287) UniProt PMID:30190287 NCBI chrNW_004955597:225,796...229,350 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
positive regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7731963)
(PMID:9478961)		 MGI PMID:7731963 PMID:9478961 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (PMID:12431371) MGI PMID:12431371 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (PMID:9432982)
(PMID:7679955), (PMID:8598040)		 MGI PMID:7679955 PMID:8598040 PMID:9432982 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (PMID:16501569) MGI PMID:16501569 NCBI chrNW_004955433:8,788,867...8,845,925
Ensembl chrNW_004955433:8,788,655...8,845,925 		JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO (PMID:20696860) UniProt PMID:20696860 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (PMID:22968459) MGI PMID:22968459 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il1rl2 interleukin 1 receptor like 2 acts_upstream_of_or_within ISO (PMID:22968459) MGI PMID:22968459 NCBI chrNW_004955470:7,703,369...7,742,058
Ensembl chrNW_004955470:7,704,134...7,742,064 		JBrowse link
G Il2 interleukin 2 ISO RGD PMID:9352365 RGD:1600138 NCBI chrNW_004955428:18,163,010...18,168,157
Ensembl chrNW_004955428:18,162,467...18,168,265 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha ISO RGD PMID:9352365 RGD:1600138 NCBI chrNW_004955421:22,642,004...22,694,729
Ensembl chrNW_004955421:22,641,511...22,694,913 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:12431371) MGI PMID:12431371 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G LOC102023843 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8638109)
(PMID:8598041), (PMID:9432982)
(PMID:8598040)		 MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chrNW_004955437:1,558,806...1,562,294
Ensembl chrNW_004955437:1,558,911...1,562,162 		JBrowse link
G Mdk midkine involved_in ISO (PMID:28183532) UniProt PMID:28183532 NCBI chrNW_004955422:1,655,351...1,657,026
Ensembl chrNW_004955422:1,655,358...1,657,044 		JBrowse link
G Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 involved_in ISO (PMID:12707323) CACAO PMID:12707323 NCBI chrNW_004955467:8,104,242...8,157,637
Ensembl chrNW_004955467:8,104,906...8,157,144 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:8666928) MGI PMID:8666928 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Rag1 recombination activating 1 involved_in ISO (PMID:1547488) CACAO PMID:1547488 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rhoh ras homolog family member H involved_in ISO (PMID:22850876) UniProt PMID:22850876 NCBI chrNW_004955443:7,227,751...7,269,984
Ensembl chrNW_004955443:7,227,751...7,264,821 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (PMID:19723499) MGI PMID:19723499 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:7630421)
(PMID:9208839)		 MGI PMID:7630421 PMID:9208839 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:22201126) UniProt PMID:22201126 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
G Zmiz1 zinc finger MIZ-type containing 1 involved_in ISO (PMID:26522984) UniProt PMID:26522984 NCBI chrNW_004955437:13,338,077...13,534,283
Ensembl chrNW_004955437:13,337,825...13,494,889 		JBrowse link
positive regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:11067867), (PMID:16670300)
(PMID:11435465)
(PMID:11067867), (PMID:12163459), (PMID:16670300)		 MGI PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:20856819) BHF-UCL PMID:20856819 NCBI chrNW_004955477:10,894,288...10,906,961
Ensembl chrNW_004955477:10,895,446...10,907,215 		JBrowse link
G Egr3 early growth response 3 acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chrNW_004955403:46,105,447...46,108,149
Ensembl chrNW_004955403:46,105,447...46,108,149 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) BHF-UCL PMID:19109233 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO (PMID:9916699)
(PMID:9252128)		 MGI PMID:9252128 PMID:9916699 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO (PMID:9215626) MGI PMID:9215626 NCBI chrNW_004955426:20,785,896...20,818,512
Ensembl chrNW_004955426:20,787,471...20,818,577 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:11017103) CACAO PMID:11017103 NCBI chrNW_004955416:5,494,030...5,561,608
Ensembl chrNW_004955416:5,494,030...5,561,614 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:19109233) BHF-UCL PMID:19109233 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 involved_in ISO (PMID:22561606) UniProt PMID:22561606 NCBI chrNW_004955458:2,084,931...2,108,328
Ensembl chrNW_004955458:2,084,868...2,108,335 		JBrowse link
G Vnn1 vanin 1 involved_in ISO (PMID:8934567) BHF-UCL PMID:8934567 NCBI chrNW_004955436:13,238,307...13,266,800
Ensembl chrNW_004955436:13,238,603...13,259,577 		JBrowse link
positive regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in ISO (PMID:17008549) UniProt PMID:17008549 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490 		JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894097) MGI PMID:11894097 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:12242343) UniProt PMID:12242343 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389 		JBrowse link
positive regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Malt1 MALT1 paracaspase involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
G Nfkbid NFKB inhibitor delta involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chrNW_004955468:2,680,934...2,688,797
Ensembl chrNW_004955468:2,680,806...2,689,155 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:26098997) UniProt PMID:26098997 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410 		JBrowse link
positive regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd2 bromodomain containing 2 involved_in ISO (PMID:28262505) UniProt PMID:28262505 NCBI chrNW_004955437:1,584,890...1,592,486
Ensembl chrNW_004955437:1,584,479...1,592,826 		JBrowse link
G Brd4 bromodomain containing 4 involved_in ISO (PMID:28262505) UniProt PMID:28262505 NCBI chrNW_004955495:7,959,033...7,989,216
Ensembl chrNW_004955495:7,957,510...7,988,498 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:28262505) UniProt PMID:28262505 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:19501566) BHF-UCL PMID:19501566 NCBI chrNW_004955458:3,946,964...3,949,180
Ensembl chrNW_004955458:3,947,803...3,949,312 		JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase involved_in ISO (PMID:36171294) UniProt PMID:36171294 NCBI chrNW_004955420:14,927,490...15,007,082
Ensembl chrNW_004955420:14,923,575...15,007,081 		JBrowse link
positive regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il18 interleukin 18 involved_in ISO (PMID:12829194) BHF-UCL PMID:12829194 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955493:5,546,340...5,580,745
Ensembl chrNW_004955493:5,545,944...5,582,422 		JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (PMID:12594267) MGI PMID:12594267 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:26098997) UniProt PMID:26098997 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410 		JBrowse link
G Prkcz protein kinase C zeta involved_in ISO (PMID:15987782) UniProt PMID:15987782 NCBI chrNW_004955486:8,947,579...9,021,702
Ensembl chrNW_004955486:8,947,579...9,021,702 		JBrowse link
G Rara retinoic acid receptor alpha involved_in ISO (PMID:18416830) BHF-UCL PMID:18416830 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:18354165) BHF-UCL PMID:18354165 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
positive regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shb SH2 domain containing adaptor protein B acts_upstream_of_or_within ISO (PMID:24645804) MGI PMID:24645804 NCBI chrNW_004955419:28,423,354...28,555,948
Ensembl chrNW_004955419:28,421,354...28,558,823 		JBrowse link
positive T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:17998389) MGI PMID:17998389 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Themis thymocyte selection associated involved_in ISO (PMID:19597497), (PMID:19597498), (PMID:19597499), (PMID:19805304) UniProt PMID:19597497 PMID:19597498 PMID:19597499 PMID:19805304 NCBI chrNW_004955436:8,743,835...8,909,040 JBrowse link
positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd3d CD3d molecule involved_in ISO (PMID:9135151) UniProt PMID:9135151 NCBI chrNW_004955412:19,481,059...19,484,890
Ensembl chrNW_004955412:19,480,977...19,484,721 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (PMID:7679955), (PMID:8598040)
(PMID:9432982)		 MGI PMID:7679955 PMID:8598040 PMID:9432982 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (PMID:12871644) MGI PMID:12871644 NCBI chrNW_004955408:22,630,375...23,059,832
Ensembl chrNW_004955408:22,630,364...23,059,899 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (PMID:15064401) MGI PMID:15064401 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180 		JBrowse link
G LOC102023843 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598040)
(PMID:8598041), (PMID:9432982)
(PMID:8638109)		 MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chrNW_004955437:1,558,806...1,562,294
Ensembl chrNW_004955437:1,558,911...1,562,162 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 involved_in ISO (PMID:17579027) UniProt PMID:17579027 NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (PMID:8666928) MGI PMID:8666928 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:17227833) BHF-UCL PMID:17227833 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:21098124) MGI PMID:21098124 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057 		JBrowse link
G Stk11 serine/threonine kinase 11 acts_upstream_of_or_within ISO (PMID:21487392) MGI PMID:21487392 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:7630421) MGI PMID:7630421 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
pre-B cell allelic exclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:19448632) UniProt PMID:19448632 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545 		JBrowse link
G Rag1 recombination activating 1 involved_in ISO (PMID:19448632) UniProt PMID:19448632 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rag2 recombination activating 2 involved_in ISO (PMID:19448632) UniProt PMID:19448632 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
pre-B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (PMID:21423173) UniProt PMID:21423173 NCBI chrNW_004955489:5,394,553...5,567,295
Ensembl chrNW_004955489:5,394,357...5,567,405 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:7795661), (PMID:9028339) MGI PMID:7795661 PMID:9028339 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chrNW_004955421:16,595,445...17,075,923
Ensembl chrNW_004955421:16,595,471...17,075,923 		JBrowse link
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A involved_in ISO (PMID:14660746) UniProt PMID:14660746 NCBI chrNW_004955570:1,270,710...1,295,658
Ensembl chrNW_004955570:1,271,131...1,295,773 		JBrowse link
pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:7621074) MGI PMID:7621074 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:19934022) MGI PMID:19934022 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:30171019) ARUK-UCL PMID:30171019 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chrNW_004955524:933,200...936,933 JBrowse link
regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chrNW_004955524:933,200...936,933 JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:7795661), (PMID:9028339) MGI PMID:7795661 PMID:9028339 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (PMID:16501569) MGI PMID:16501569 NCBI chrNW_004955433:8,788,867...8,845,925
Ensembl chrNW_004955433:8,788,655...8,845,925 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:6610701) MGI PMID:6610701 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:9806640) UniProt PMID:9806640 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 acts_upstream_of_or_within ISO (PMID:15143214) MGI PMID:15143214 NCBI chrNW_004955413:27,865,672...27,893,793
Ensembl chrNW_004955413:27,866,271...27,893,844 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of_or_within ISO (PMID:9254656) MGI PMID:9254656 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177 		JBrowse link
G Slamf8 SLAM family member 8 involved_in ISO (PMID:11313408) UniProt PMID:11313408 NCBI chrNW_004955468:11,623,092...11,632,566
Ensembl chrNW_004955468:11,623,197...11,632,573 		JBrowse link
G Tlr9 toll like receptor 9 involved_in ISO (PMID:23857366) UniProt PMID:23857366 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:27102483) UniProt PMID:27102483 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:27102483) UniProt PMID:27102483 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sh3rf1 SH3 domain containing ring finger 1 involved_in ISO (PMID:27084103) UniProt PMID:27084103 NCBI chrNW_004955403:36,989,509...37,141,188
Ensembl chrNW_004955403:36,988,811...37,142,401 		JBrowse link
regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk18 potassium two pore domain channel subfamily K member 18 involved_in ISO (PMID:34702947) UniProt PMID:34702947 NCBI chrNW_004955431:21,916,587...21,927,346 JBrowse link
regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
regulation of extrathymic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm1 PR/SET domain 1 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056 		JBrowse link
G Znf683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr3 early growth response 3 acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chrNW_004955403:46,105,447...46,108,149
Ensembl chrNW_004955403:46,105,447...46,108,149 		JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
G Sox13 SRY-box transcription factor 13 acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chrNW_004955406:39,959,458...39,994,214
Ensembl chrNW_004955406:39,966,055...39,994,214 		JBrowse link
G Tcf7 transcription factor 7 involved_in ISO (PMID:23562159) UniProt PMID:23562159 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527 		JBrowse link
regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfrsf9 TNF receptor superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) MGI PMID:8405064 NCBI chrNW_004955486:4,986,245...5,009,437
Ensembl chrNW_004955486:4,989,582...5,010,213 		JBrowse link
G Tnfsf9 TNF superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) MGI PMID:8405064 NCBI chrNW_004955495:3,101,965...3,107,552 JBrowse link
regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:9155026) UniProt PMID:9155026 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004955415:11,643,846...11,666,131
Ensembl chrNW_004955415:11,643,846...11,666,131 		JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO (PMID:18495327) MGI PMID:18495327 NCBI chrNW_004955458:3,799,450...3,833,269
Ensembl chrNW_004955458:3,799,450...3,833,263 		JBrowse link
regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:15240675) MGI PMID:15240675 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals9 galectin 9 involved_in ISO (PMID:23408620) UniProt PMID:23408620 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Prdm1 PR/SET domain 1 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056 		JBrowse link
G Znf683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Znf683 zinc finger protein 683 involved_in ISO (PMID:22885984) UniProt PMID:22885984 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm1 PR/SET domain 1 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056 		JBrowse link
G Znf683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chrNW_004955452:5,748,569...5,758,389
Ensembl chrNW_004955452:5,748,639...5,754,911 		JBrowse link
regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn1 forkhead box N1 involved_in ISO (PMID:24184560) UniProt PMID:24184560 NCBI chrNW_004955481:4,611,246...4,640,606
Ensembl chrNW_004955481:4,611,087...4,627,113 		JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (PMID:18195075) UniProt PMID:18195075 NCBI chrNW_004955444:19,453,789...19,796,419
Ensembl chrNW_004955444:19,453,783...19,795,167 		JBrowse link
regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (PMID:21245484) MGI PMID:21245484 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) MGI PMID:18725527 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Drosha drosha ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) MGI PMID:18725527 NCBI chrNW_004955426:17,387,595...17,505,126
Ensembl chrNW_004955426:17,387,534...17,502,294 		JBrowse link
G Fanca FA complementation group A acts_upstream_of_or_within ISO (PMID:24501220) MGI PMID:24501220 NCBI chrNW_004955541:3,272,936...3,320,229
Ensembl chrNW_004955541:3,273,022...3,320,052 		JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:24501220) MGI PMID:24501220 NCBI chrNW_004955561:1,460,080...1,538,026
Ensembl chrNW_004955561:1,464,869...1,538,045 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:28424240) UniProt PMID:28424240 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:21245484) MGI PMID:21245484 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Sh2b3 SH2B adaptor protein 3 ISO RGD PMID:25776069 RGD:13442483 NCBI chrNW_004955482:8,079,905...8,100,791
Ensembl chrNW_004955482:8,096,160...8,097,765 		JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:21245484) MGI PMID:21245484 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:21690296) UniProt PMID:21690296 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7670465) MGI PMID:7670465 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18228248) MGI PMID:18228248 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISO (PMID:28507030) UniProt PMID:28507030 NCBI chrNW_004955420:25,641,184...25,664,413 JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (PMID:24687959) UniProt PMID:24687959 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:6610701) MGI PMID:6610701 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within ISO (PMID:10704459) MGI PMID:10704459 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G LOC102023166 cytochrome P450 26B1 acts_upstream_of_or_within ISO (PMID:23991089) MGI PMID:23991089 NCBI chrNW_004955424:13,336,189...13,355,368
Ensembl chrNW_004955424:13,336,189...13,355,423 		JBrowse link
G LOC102025166 HLA class II histocompatibility antigen, DO alpha chain acts_upstream_of_or_within ISO (PMID:11069069) MGI PMID:11069069 NCBI chrNW_004955437:1,603,395...1,606,800
Ensembl chrNW_004955437:1,603,168...1,607,134 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28792938) UniProt PMID:28792938 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G Prelid1 PRELI domain containing 1 involved_in ISO (PMID:18945965) UniProt PMID:18945965 NCBI chrNW_004955408:29,551,253...29,554,778
Ensembl chrNW_004955408:29,551,424...29,554,436 		JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within ISO (PMID:18684012) MGI PMID:18684012 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Slc46a2 solute carrier family 46 member 2 acts_upstream_of_or_within ISO (PMID:18684012) MGI PMID:18684012 NCBI chrNW_004955419:14,547,393...14,557,447
Ensembl chrNW_004955419:14,547,103...14,557,531 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:21690296) UniProt PMID:21690296 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:3876160 RGD:152995412 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chrNW_004955528:1,753,450...1,759,886
Ensembl chrNW_004955528:1,753,450...1,759,886 		JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chrNW_004955524:933,200...936,933 JBrowse link
G Clptm1 CLPTM1 regulator of GABA type A receptor forward trafficking involved_in ISO (PMID:9218588) BHF-UCL PMID:9218588 NCBI chrNW_004955555:2,029,591...2,056,321
Ensembl chrNW_004955555:2,029,546...2,058,497 		JBrowse link
G Foxn1 forkhead box N1 acts_upstream_of_or_within ISO (PMID:22072979) MGI PMID:22072979 NCBI chrNW_004955481:4,611,246...4,640,606
Ensembl chrNW_004955481:4,611,087...4,627,113 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:24043312) MGI PMID:24043312 NCBI chrNW_004955441:6,649,895...6,724,271
Ensembl chrNW_004955441:6,646,385...6,713,028 		JBrowse link
G Sos2 SOS Ras/Rho guanine nucleotide exchange factor 2 acts_upstream_of_or_within ISO (PMID:24043312) MGI PMID:24043312 NCBI chrNW_004955409:12,542,353...12,622,165
Ensembl chrNW_004955409:12,542,401...12,620,971 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO (PMID:9126927)
(PMID:9389660)		 MGI PMID:9126927 PMID:9389660 NCBI chrNW_004955429:23,011,627...23,198,188
Ensembl chrNW_004955429:23,010,790...23,198,250 		JBrowse link
regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il27 interleukin 27 involved_in ISO (PMID:12734330) UniProt PMID:12734330 NCBI chrNW_004955493:6,712,005...6,717,417
Ensembl chrNW_004955493:6,712,005...6,717,417 		JBrowse link
regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 NOT|involved_in ISO (PMID:19050256) UniProt PMID:19050256 NCBI chrNW_004955453:6,846,625...6,850,007
Ensembl chrNW_004955453:6,846,549...6,850,031 		JBrowse link
G Ccr6 C-C motif chemokine receptor 6 NOT|involved_in ISO (PMID:19050256) UniProt PMID:19050256 NCBI chrNW_004955439:14,921,524...14,949,493
Ensembl chrNW_004955439:14,920,601...14,924,191 		JBrowse link
regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain involved_in ISO (PMID:15322540) UniProt PMID:15322540 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chrNW_004955545:1,504,656...1,519,954
Ensembl chrNW_004955545:1,503,514...1,521,003 		JBrowse link
regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd28 CD28 molecule involved_in ISO (PMID:18641304) BHF-UCL PMID:18641304 NCBI chrNW_004955457:11,159,769...11,253,099
Ensembl chrNW_004955457:11,162,282...11,192,991 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of		 ISO (PMID:32644293)
(PMID:16769892), (PMID:17028180)		 UniProt
MGI		 PMID:16769892 PMID:17028180 PMID:32644293 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:32644293)
(PMID:15100250)
(PMID:17481928)		 UniProt
MGI		 PMID:15100250 PMID:17481928 PMID:32644293 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (PMID:32644293) UniProt PMID:32644293 NCBI chrNW_004955405:31,977,045...32,006,733
Ensembl chrNW_004955405:31,977,602...32,006,810 		JBrowse link
T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of ISO (PMID:7731963)
(PMID:9478961)		 MGI PMID:7731963 PMID:9478961 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:31539517) MGI PMID:31539517 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:12717432) MGI PMID:12717432 NCBI chrNW_004955424:23,233,523...23,330,679
Ensembl chrNW_004955424:23,233,523...23,330,679 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8170972)
(PMID:9215624)		 MGI PMID:8170972 PMID:9215624 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 NOT|acts_upstream_of_or_within ISO (PMID:17028169) MGI PMID:17028169 NCBI chrNW_004955440:17,364,996...17,497,446
Ensembl chrNW_004955440:17,371,321...17,497,616 		JBrowse link
G Cd4 CD4 molecule involved_in ISO (PMID:1533274) UniProt PMID:1533274 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:17684005) BHF-UCL PMID:17684005 NCBI chrNW_004955444:17,859,999...18,067,623
Ensembl chrNW_004955444:17,858,771...18,067,248 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (PMID:14608382) MGI PMID:14608382 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (PMID:15146182) UniProt PMID:15146182 NCBI chrNW_004955416:7,807,049...7,816,346
Ensembl chrNW_004955416:7,807,049...7,817,420 		JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 acts_upstream_of ISO (PMID:12794108) MGI PMID:12794108 NCBI chrNW_004955482:9,416,456...9,447,265
Ensembl chrNW_004955482:9,417,116...9,446,239 		JBrowse link
G Egr1 early growth response 1 acts_upstream_of_or_within ISO (PMID:12165491) MGI PMID:12165491 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23169635) MGI PMID:23169635 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:32610127) MGI PMID:32610127 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:2017177)
(PMID:7956841)		 MGI PMID:2017177 PMID:7956841 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Gpr89a G protein-coupled receptor 89A involved_in ISO (PMID:32220963) UniProt PMID:32220963 NCBI chrNW_004955568:436,817...493,188 JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:15713121) MGI PMID:15713121 NCBI chrNW_004955437:2,478,414...2,486,809
Ensembl chrNW_004955437:2,478,414...2,486,809 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:34155405) UniProt PMID:34155405 NCBI chrNW_004955451:14,483,669...14,571,108
Ensembl chrNW_004955451:14,484,132...14,536,916 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO (PMID:9215624) MGI PMID:9215624 NCBI chrNW_004955426:20,785,896...20,818,512
Ensembl chrNW_004955426:20,787,471...20,818,577 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (PMID:14517551) MGI PMID:14517551 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180 		JBrowse link
G Itpripl1 ITPRIP like 1 acts_upstream_of_or_within ISO (PMID:38614099) MGI PMID:38614099 NCBI chrNW_004955470:3,870,296...3,873,212
Ensembl chrNW_004955470:3,870,296...3,873,212 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (PMID:10383933) UniProt PMID:10383933 NCBI chrNW_004955538:3,421,685...3,433,829
Ensembl chrNW_004955538:3,421,685...3,433,842 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (PMID:27733580) GO_Central PMID:27733580 NCBI chrNW_004955451:11,770,201...11,802,992
Ensembl chrNW_004955451:11,770,201...11,802,992 		JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 acts_upstream_of_or_within ISO (PMID:26438836) MGI PMID:26438836 NCBI chrNW_004955559:2,080,085...2,087,579
Ensembl chrNW_004955559:2,080,085...2,087,579 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase involved_in ISO (PMID:12354381) UniProt PMID:12354381 NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:1579166) UniProt PMID:1579166 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Lep leptin involved_in ISO (PMID:9732873) UniProt PMID:9732873 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472 		JBrowse link
G Lepr leptin receptor involved_in ISO (PMID:9732873) UniProt PMID:9732873 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:19179613) MGI PMID:19179613 NCBI chrNW_004955425:3,718,291...3,755,942
Ensembl chrNW_004955425:3,718,206...3,756,142 		JBrowse link
G Lmbr1l limb development membrane protein 1 like involved_in ISO (PMID:31073040) UniProt PMID:31073040 NCBI chrNW_004955500:7,922,422...7,934,538
Ensembl chrNW_004955500:7,921,233...7,934,538 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:31539517) MGI PMID:31539517 NCBI chrNW_004955505:729...64,653 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:9768749) MGI PMID:9768749 NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:26019294)
(PMID:31182790)		 MGI PMID:26019294 PMID:31182790 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in ISO (PMID:16439204) UniProt PMID:16439204 NCBI chrNW_004955453:14,278,773...14,362,167
Ensembl chrNW_004955453:14,281,069...14,363,876 		JBrowse link
G Patz1 POZ/BTB and AT hook containing zinc finger 1 acts_upstream_of_or_within ISO (PMID:16491076) MGI PMID:16491076 NCBI chrNW_004955455:5,544,841...5,566,630
Ensembl chrNW_004955455:5,542,659...5,565,154 		JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:16314502) MGI PMID:16314502 NCBI chrNW_004955407:38,949,060...38,982,984
Ensembl chrNW_004955407:38,948,200...38,982,984 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta acts_upstream_of_or_within ISO (PMID:12091710) MGI PMID:12091710 NCBI chrNW_004955437:18,323,852...18,377,815
Ensembl chrNW_004955437:18,323,857...18,377,815 		JBrowse link
G Prex1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 acts_upstream_of_or_within ISO (PMID:21178006) MGI PMID:21178006 NCBI chrNW_004955445:9,229,775...9,401,277
Ensembl chrNW_004955445:9,229,793...9,398,662 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:9271584) UniProt PMID:9271584 NCBI chrNW_004955402:771,410...846,671 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 acts_upstream_of_or_within ISO (PMID:14752163) MGI PMID:14752163 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in ISO (PMID:15557316), (PMID:8334701) UniProt PMID:8334701 PMID:15557316 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552 		JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K ISO RGD PMID:17434290 RGD:15036800 NCBI chrNW_004955436:8,975,742...9,371,608
Ensembl chrNW_004955436:8,975,554...9,380,971 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:11980719), (PMID:14595002) MGI PMID:11980719 PMID:14595002 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Rhoh ras homolog family member H involved_in ISO (PMID:17028588), (PMID:17119112) UniProt PMID:17028588 PMID:17119112 NCBI chrNW_004955443:7,227,751...7,269,984
Ensembl chrNW_004955443:7,227,751...7,264,821 		JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within ISO (PMID:7862157) MGI PMID:7862157 NCBI chrNW_004955437:10,598,145...10,885,858
Ensembl chrNW_004955437:10,598,145...10,800,560 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:9174623) BHF-UCL PMID:9174623 NCBI chrNW_004955483:5,076,664...5,077,059 JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chrNW_004955449:1,347,781...1,404,368 JBrowse link
G Tbx21 T-box transcription factor 21 acts_upstream_of_or_within ISO (PMID:20399120) MGI PMID:20399120 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:15294947) MGI PMID:15294947 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:17481928) MGI PMID:17481928 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:22585710) MGI PMID:22585710 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:21178006) MGI PMID:21178006 NCBI chrNW_004955495:2,697,508...2,755,468
Ensembl chrNW_004955495:2,695,730...2,755,824 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of ISO (PMID:19723499) MGI PMID:19723499 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of ISO (PMID:9208839) MGI PMID:9208839 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of ISO (PMID:11435465)
(PMID:11067867), (PMID:12163459), (PMID:16670300)
(PMID:11067867), (PMID:16670300)		 MGI PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17371977) BHF-UCL PMID:17371977 NCBI chrNW_004955487:5,180,241...5,218,298
Ensembl chrNW_004955487:5,180,252...5,218,216 		JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:16025118) MGI PMID:16025118 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832 		JBrowse link
G B2m beta-2-microglobulin acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568 		JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:16670294) MGI PMID:16670294 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8170972), (PMID:9028316) MGI PMID:8170972 PMID:9028316 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Cd3e CD3e molecule ISO RGD PMID:11896936 RGD:2313407 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cdk6 cyclin dependent kinase 6 acts_upstream_of_or_within ISO (PMID:21508411) MGI PMID:21508411 NCBI chrNW_004955432:9,521,794...9,727,772
Ensembl chrNW_004955432:9,521,794...9,726,417 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (PMID:16025118) MGI PMID:16025118 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within ISO (PMID:15879105) MGI PMID:15879105 NCBI chrNW_004955442:12,971,031...13,002,605
Ensembl chrNW_004955442:12,967,438...13,010,943 		JBrowse link
G Fadd Fas associated via death domain involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918 		JBrowse link
G Fzd7 frizzled class receptor 7 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955457:12,729,277...12,733,057
Ensembl chrNW_004955457:12,731,279...12,732,979 		JBrowse link
G Fzd8 frizzled class receptor 8 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955462:5,870,410...5,873,714 JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:8945476)
(PMID:14670303)
(PMID:18776904)
(PMID:19934022)		 MGI PMID:8945476 PMID:14670303 PMID:18776904 PMID:19934022 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:22665763) MGI PMID:22665763 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:15855276) MGI
BHF-UCL		 PMID:15855276 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (PMID:9252128)
(PMID:9916699)		 MGI PMID:9252128 PMID:9916699 NCBI chrNW_004955475:10,676,592...10,680,565
Ensembl chrNW_004955475:10,676,870...10,680,517 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of ISO (PMID:9215626) MGI PMID:9215626 NCBI chrNW_004955426:20,785,896...20,818,512
Ensembl chrNW_004955426:20,787,471...20,818,577 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase acts_upstream_of_or_within ISO (PMID:14715629) MGI PMID:14715629 NCBI chrNW_004955506:5,577,735...5,588,307
Ensembl chrNW_004955506:5,577,437...5,588,372 		JBrowse link
G LOC102013688 major histocompatibility complex class I-related gene protein involved_in ISO (PMID:12634786) UniProt PMID:12634786 NCBI chrNW_004955406:20,098,544...20,117,065
Ensembl chrNW_004955406:20,098,538...20,125,057 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO (PMID:19164599) MGI PMID:19164599 NCBI chrNW_004955445:16,219,675...16,222,913 JBrowse link
G Mpzl2 myelin protein zero like 2 acts_upstream_of_or_within ISO (PMID:19851463) MGI PMID:19851463 NCBI chrNW_004955412:19,422,532...19,434,596
Ensembl chrNW_004955412:19,422,537...19,434,596 		JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 acts_upstream_of_or_within ISO (PMID:17640884) MGI PMID:17640884 NCBI chrNW_004955413:33,492,348...33,503,804 JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842 		JBrowse link
G Nfkbid NFKB inhibitor delta acts_upstream_of ISO (PMID:11931770) MGI PMID:11931770 NCBI chrNW_004955468:2,680,934...2,688,797
Ensembl chrNW_004955468:2,680,806...2,689,155 		JBrowse link
G Nkap NFKB activating protein acts_upstream_of_or_within ISO (PMID:20610818) MGI PMID:20610818 NCBI chrNW_004955534:106,122...119,508
Ensembl chrNW_004955534:106,122...119,344 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Prr7 proline rich 7, synaptic involved_in ISO (PMID:27657535) MGI PMID:27657535 NCBI chrNW_004955408:29,685,254...29,695,113
Ensembl chrNW_004955408:29,692,004...29,695,113 		JBrowse link
G Psmb11 proteasome subunit beta 11 acts_upstream_of_or_within ISO (PMID:31915251) MGI PMID:31915251 NCBI chrNW_004955409:37,260,080...37,260,866 JBrowse link
G Rabl3 RAB, member of RAS oncogene family like 3 involved_in ISO (PMID:32220963) UniProt PMID:32220963 NCBI chrNW_004955427:20,204,901...20,242,242
Ensembl chrNW_004955427:20,204,901...20,242,242 		JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:9215624)
(PMID:1547488)		 MGI
UniProt		 PMID:1547488 PMID:9215624 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rag2 recombination activating 2 involved_in ISO (PMID:1547488) UniProt PMID:1547488 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Ripk3 receptor interacting serine/threonine kinase 3 involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chrNW_004955409:35,961,604...35,965,477
Ensembl chrNW_004955409:35,937,880...35,965,712 		JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
G Rps6 ribosomal protein S6 acts_upstream_of_or_within ISO (PMID:16357222) MGI PMID:16357222 NCBI chrNW_004955434:21,744,045...21,745,646
Ensembl chrNW_004955434:21,744,082...21,746,626 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of
involved_in		 ISO (PMID:10981962)
(PMID:19273836)		 MGI
BHF-UCL		 PMID:10981962 PMID:19273836 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,305,363...16,319,219
Ensembl chrNW_004955451:16,305,363...16,318,534 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO (PMID:15294943) MGI PMID:15294943 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) MGI PMID:18958875 NCBI chrNW_004955495:6,337,311...6,365,193
Ensembl chrNW_004955495:6,337,870...6,367,487 		JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 acts_upstream_of ISO (PMID:28598420) MGI PMID:28598420 NCBI chrNW_004955458:2,084,931...2,108,328
Ensembl chrNW_004955458:2,084,868...2,108,335 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:16357222) MGI PMID:16357222 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within ISO (PMID:22201126) MGI PMID:22201126 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:20622884) UniProt
BHF-UCL		 PMID:20622884 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:20622884) BHF-UCL
UniProt		 PMID:20622884 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4d C-type lectin domain family 4 member D acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chrNW_004955413:5,267,548...5,276,969
Ensembl chrNW_004955413:5,267,161...5,277,090 		JBrowse link
G Clec4e C-type lectin domain family 4 member E acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chrNW_004955413:5,256,523...5,261,385
Ensembl chrNW_004955413:5,256,440...5,262,938 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chrNW_004955468:12,971,931...12,975,206
Ensembl chrNW_004955468:12,971,931...12,975,206 		JBrowse link
G Sema4a semaphorin 4A involved_in ISO (PMID:15780988) UniProt PMID:15780988 NCBI chrNW_004955545:2,316,402...2,341,873
Ensembl chrNW_004955545:2,316,390...2,342,233 		JBrowse link
T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Foxn1 forkhead box N1 involved_in ISO (PMID:24184560) UniProt PMID:24184560 NCBI chrNW_004955481:4,611,246...4,640,606
Ensembl chrNW_004955481:4,611,087...4,627,113 		JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:9252127) MGI PMID:9252127 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:12717433) MGI PMID:12717433 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (PMID:10911993) MGI PMID:10911993 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chrNW_004955408:5,362,423...5,388,684
Ensembl chrNW_004955408:5,362,084...5,388,527 		JBrowse link
T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd4 CD4 molecule involved_in ISO (PMID:9551897) UniProt PMID:9551897 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
T follicular helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) UniProt PMID:24463518 NCBI chrNW_004955422:14,051,140...14,053,521
Ensembl chrNW_004955422:14,051,140...14,053,521 		JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:24859450) UniProt PMID:24859450 NCBI chrNW_004955421:16,595,445...17,075,923
Ensembl chrNW_004955421:16,595,471...17,075,923 		JBrowse link
G Gpr183 G protein-coupled receptor 183 involved_in ISO (PMID:27147029) UniProt PMID:27147029 NCBI chrNW_004955404:11,264,954...11,277,531
Ensembl chrNW_004955404:11,264,954...11,277,531 		JBrowse link
G Icos inducible T cell costimulator involved_in ISO (PMID:27135603) UniProt PMID:27135603 NCBI chrNW_004955457:10,934,390...10,952,318
Ensembl chrNW_004955457:10,934,341...10,952,404 		JBrowse link
G Icoslg inducible T cell costimulator ligand involved_in ISO (PMID:24411167) UniProt PMID:24411167 NCBI chrNW_004955407:41,190,875...41,197,521
Ensembl chrNW_004955407:41,189,974...41,198,254 		JBrowse link
G Il21 interleukin 21 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO (PMID:30523347) UniProt PMID:30523347 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within ISO (PMID:23583643) MGI PMID:23583643 NCBI chrNW_004955406:14,053,122...14,123,023
Ensembl chrNW_004955406:14,053,122...14,123,029 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within ISO (PMID:23583643) MGI PMID:23583643 NCBI chrNW_004955419:5,054,288...5,103,926
Ensembl chrNW_004955419:5,054,289...5,103,926 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:27135603) UniProt PMID:27135603 NCBI chrNW_004955458:11,210,120...11,263,632
Ensembl chrNW_004955458:11,211,398...11,263,867 		JBrowse link
T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracr2a calcium release activated channel regulator 2A involved_in ISO (PMID:29987160) UniProt PMID:29987160 NCBI chrNW_004955413:1,425,165...1,544,226
Ensembl chrNW_004955413:1,429,021...1,543,662 		JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15944249) UniProt PMID:15944249 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Il18r1 interleukin 18 receptor 1 acts_upstream_of_or_within ISO (PMID:10227969) MGI PMID:10227969 NCBI chrNW_004955470:7,854,995...7,887,810
Ensembl chrNW_004955470:7,854,988...7,887,883 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955493:5,546,340...5,580,745
Ensembl chrNW_004955493:5,545,944...5,582,422 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:18579517) UniProt PMID:18579517 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:31182790) MGI PMID:31182790 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (PMID:16081776) MGI PMID:16081776 NCBI chrNW_004955555:2,060,533...2,086,229
Ensembl chrNW_004955555:2,060,533...2,086,229 		JBrowse link
G Sema4a semaphorin 4A involved_in ISO (PMID:15780988) UniProt PMID:15780988 NCBI chrNW_004955545:2,316,402...2,341,873
Ensembl chrNW_004955545:2,316,390...2,342,233 		JBrowse link
G Stat4 signal transducer and activator of transcription 4 involved_in ISO (PMID:14688310) UniProt PMID:14688310 NCBI chrNW_004955403:8,061,471...8,144,252
Ensembl chrNW_004955403:8,061,471...8,144,276 		JBrowse link
G Tmem98 transmembrane protein 98 involved_in ISO (PMID:25946230) UniProt PMID:25946230 NCBI chrNW_004955481:7,788,066...7,797,433
Ensembl chrNW_004955481:7,785,967...7,798,575 		JBrowse link
T-helper 1 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:26410627) MGI PMID:26410627 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Spn sialophorin involved_in ISO (PMID:18036228) UniProt PMID:18036228 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chrNW_004955458:4,833,417...4,847,956
Ensembl chrNW_004955458:4,833,515...4,843,273 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:10761931) UniProt PMID:10761931 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937 		JBrowse link
T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISO (PMID:20421391), (PMID:21572431) UniProt PMID:20421391 PMID:21572431 NCBI chrNW_004955523:42,365...66,103
Ensembl chrNW_004955523:42,218...66,103 		JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:23241884) UniProt PMID:23241884 NCBI chrNW_004955507:5,552,788...5,594,911
Ensembl chrNW_004955507:5,552,764...5,594,911 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:20383124) MGI PMID:20383124 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (PMID:18164222) GO_Central PMID:18164222 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233 		JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within
involved_in		 ISO (PMID:18792410)
(PMID:16990136), (PMID:18164222)
(PMID:20383124)		 MGI
UniProt		 PMID:16990136 PMID:18164222 PMID:18792410 PMID:20383124 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISO (PMID:19578362), (PMID:22983707) UniProt PMID:19578362 PMID:22983707 NCBI chrNW_004955523:42,365...66,103
Ensembl chrNW_004955523:42,218...66,103 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:16990136)
(PMID:27893700)		 UniProt PMID:16990136 PMID:27893700 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Il6r interleukin 6 receptor involved_in ISO (PMID:27893700) UniProt PMID:27893700 NCBI chrNW_004955545:932,814...979,359
Ensembl chrNW_004955545:950,765...981,762 		JBrowse link
G Irf4 interferon regulatory factor 4 involved_in ISO (PMID:22983707) UniProt PMID:22983707 NCBI chrNW_004955465:12,497,534...12,512,529
Ensembl chrNW_004955465:12,497,462...12,513,106 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004955543:452,172...484,564
Ensembl chrNW_004955543:452,121...484,560 		JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (PMID:22184727) UniProt PMID:22184727 NCBI chrNW_004955468:12,233,629...12,264,502 JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:28065600) UniProt PMID:28065600 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687 		JBrowse link
T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISO (PMID:20421391), (PMID:21572431) UniProt PMID:20421391 PMID:21572431 NCBI chrNW_004955523:42,365...66,103
Ensembl chrNW_004955523:42,218...66,103 		JBrowse link
G Bcl3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:16081776) MGI PMID:16081776 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of ISO (PMID:12594267) MGI PMID:12594267 NCBI chrNW_004955420:19,998,960...20,021,200
Ensembl chrNW_004955420:19,998,742...20,022,259 		JBrowse link
G Gata3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:20484083)
(PMID:20706986)		 UniProt
MGI		 PMID:20484083 PMID:20706986 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 NCBI chrNW_004955493:5,546,340...5,580,745
Ensembl chrNW_004955493:5,545,944...5,582,422 		JBrowse link
G Il6 interleukin 6 acts_upstream_of ISO (PMID:12594267) MGI PMID:12594267 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (PMID:20484083) UniProt PMID:20484083 NCBI chrNW_004955412:19,586,435...19,670,149
Ensembl chrNW_004955412:19,586,141...19,665,527 		JBrowse link
G Men1 menin 1 involved_in ISO (PMID:20484083) UniProt PMID:20484083 NCBI chrNW_004955422:20,356,491...20,363,374
Ensembl chrNW_004955422:20,356,491...20,363,575 		JBrowse link
G Myb MYB proto-oncogene, transcription factor involved_in ISO (PMID:20484083) UniProt PMID:20484083 NCBI chrNW_004955439:1,523,516...1,560,185
Ensembl chrNW_004955439:1,521,292...1,560,220 		JBrowse link
T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8434133) MGI PMID:8434133 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:1673147) UniProt PMID:1673147 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in ISO (PMID:19465928) UniProt PMID:19465928 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822 		JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (PMID:14691482) UniProt PMID:14691482 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694 		JBrowse link
thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chrNW_004955460:12,368,987...12,487,675
Ensembl chrNW_004955460:12,368,918...12,490,041 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:14670303) MGI PMID:14670303 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (PMID:14517551) MGI PMID:14517551 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (PMID:10383933) UniProt PMID:10383933 NCBI chrNW_004955538:3,421,685...3,433,829
Ensembl chrNW_004955538:3,421,685...3,433,842 		JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase 70kDa acts_upstream_of_or_within ISO (PMID:9208839) MGI PMID:9208839 NCBI chrNW_004955470:4,379,260...4,397,851
Ensembl chrNW_004955470:4,386,311...4,396,419 		JBrowse link
transitional one stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:19228876) MGI PMID:19228876 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO (PMID:17581616) MGI PMID:17581616 NCBI chrNW_004955404:3,536,041...3,573,242
Ensembl chrNW_004955404:3,536,868...3,569,750 		JBrowse link
transitional two stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Traf3ip2 TRAF3 interacting protein 2 involved_in ISO (PMID:20543113) MGI PMID:20543113 NCBI chrNW_004955411:36,328,152...36,363,614
Ensembl chrNW_004955411:36,326,926...36,363,288 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12619
    immune system process 2046
      leukocyte activation 916
        lymphocyte activation 742
          lymphocyte differentiation 403
            B cell differentiation + 139
            T cell differentiation + 302
            natural killer cell differentiation + 34
            negative regulation of lymphocyte differentiation + 58
            positive regulation of lymphocyte differentiation + 110
            regulation of lymphocyte differentiation + 192
Path 2
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  biological_process 12619
    developmental process 5988
      cellular developmental process 3975
        cell differentiation 3974
          cell development 2914
            hemopoiesis 946
              leukocyte differentiation 611
                mononuclear cell differentiation 496
                  lymphocyte differentiation 403
                    B cell differentiation + 139
                    T cell differentiation + 302
                    natural killer cell differentiation + 34
                    negative regulation of lymphocyte differentiation + 58
                    positive regulation of lymphocyte differentiation + 110
                    regulation of lymphocyte differentiation + 192
paths to the root