Symbol:
Irf2bp2
Name:
interferon regulatory factor 2 binding protein 2
RGD ID:
8783948
Description:
ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN immature B cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); common variable immunodeficiency 14 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
interferon regulatory factor 2-binding protein 2
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information:
Annotation category: partial on reference assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955492 4,889,878 - 4,894,325 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955492 4,889,878 - 4,895,508 (-) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Irf2bp2 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955492 4,889,878 - 4,894,325 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955492 4,889,878 - 4,895,508 (-) NCBI ChiLan1.0 ChiLan1.0
IRF2BP2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 234,604,269 - 234,610,178 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 234,602,300 - 234,610,178 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 234,740,015 - 234,745,924 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 232,806,638 - 232,811,894 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 1 208,010,244 - 208,015,502 (-) NCBI Celera Cytogenetic Map 1 q42.3 NCBI HuRef 1 205,232,981 - 205,238,075 (-) NCBI HuRef CHM1_1 1 236,012,268 - 236,017,524 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 233,994,665 - 234,000,583 (-) NCBI T2T-CHM13v2.0
Irf2bp2 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 8 127,315,035 - 127,320,725 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 8 127,315,035 - 127,320,725 (-) Ensembl GRCm39 Ensembl GRCm38 8 126,588,296 - 126,593,986 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 8 126,588,296 - 126,593,986 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 8 129,112,196 - 129,117,336 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 8 129,474,384 - 129,479,526 (-) NCBI MGSCv36 mm8 Celera 8 130,897,219 - 130,902,103 (-) NCBI Celera Cytogenetic Map 8 E2 NCBI cM Map 8 74.57 NCBI
Irf2bp2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 19 71,456,689 - 71,462,368 (-) NCBI GRCr8 mRatBN7.2 19 54,559,417 - 54,565,096 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 19 54,560,128 - 54,566,642 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 19 61,345,743 - 61,351,427 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 19 62,205,652 - 62,211,336 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 19 64,291,822 - 64,297,510 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 19 59,497,021 - 59,502,298 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 19 59,499,876 - 59,502,161 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 19 70,169,829 - 70,175,053 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Celera 19 53,912,064 - 53,916,754 (-) NCBI Celera Cytogenetic Map 19 q12 NCBI
IRF2BP2 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 14,590,955 - 14,596,867 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 14,801,899 - 14,807,596 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 210,143,516 - 210,148,878 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 215,163,887 - 215,168,637 (-) NCBI panpan1.1 PanPan1.1 panPan2
IRF2BP2 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 4 5,242,225 - 5,249,371 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 4 5,244,869 - 5,247,247 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 4 5,226,563 - 5,232,031 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 4 5,264,484 - 5,269,969 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 4 5,264,541 - 5,266,921 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 4 5,277,144 - 5,282,623 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 4 5,393,163 - 5,398,624 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 4 5,617,176 - 5,622,660 (+) NCBI UU_Cfam_GSD_1.0
Irf2bp2 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409344 41,490,015 - 41,493,458 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936484 17,655,241 - 17,659,553 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936484 17,653,519 - 17,661,811 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
IRF2BP2
IRF2BP2 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 25 71,774,447 - 71,779,759 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 25 71,773,588 - 71,779,835 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666055 73,799,101 - 73,804,664 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Irf2bp2
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000005177 ⟹ ENSCLAP00000005084
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955492 4,889,878 - 4,894,325 (-) Ensembl
RefSeq Acc Id:
XM_005405019 ⟹ XP_005405076
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955492 4,889,878 - 4,895,508 (-) NCBI
Sequence:
AGCAGCAGCGGCAGCGGCAGCAGCAACAGCGGCAGCAACAGCAACAACAGCAACGAGGCGGCGGCGGCGCTGAGGCGGGCTGCGCGCTGCAGAGCGGCGACGCCAGGAGCTGGGAGAGCGCGGCGGCG
hide sequence
RefSeq Acc Id:
XP_005405076 ⟸ XM_005405019
- Sequence:
MAAAVAVAAASRRQSCYLCDLPRMPWAMLWDFTEPVCRGCVNYEGADRVELVIETARQLKRAHGCVPEGRSPPGAAPPAAAKPPPLSSAKDLLLPPPPAPEASPRAPQGLERFPRLGADLAGRAPANG
hide sequence
Ensembl Acc Id:
ENSCLAP00000005084 ⟸ ENSCLAT00000005177
