Prelid1 (PRELI domain containing 1) - Rat Genome Database
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Gene: Prelid1 (PRELI domain containing 1) Chinchilla lanigera
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Symbol: Prelid1
Name: PRELI domain containing 1
RGD ID: 8728581
Description: ENCODES a protein that exhibits phosphatidic acid transfer activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of mitochondrial membrane potential (ortholog); negative regulation of release of cytochrome c from mitochondria (ortholog); ASSOCIATED WITH Chromosome 5, Trisomy 5q (ortholog); COVID-19 (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: PRELI domain-containing protein 1, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,551,424 - 29,554,436 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,551,253 - 29,554,778 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Prelid1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,551,424 - 29,554,436 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,551,253 - 29,554,778 (+)NCBIChiLan1.0ChiLan1.0
PRELID1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5177,303,799 - 177,306,949 (+)EnsemblGRCh38hg38GRCh38
GRCh385177,303,799 - 177,306,949 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh375176,730,763 - 176,733,960 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh375176,730,800 - 176,733,950 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365176,663,441 - 176,666,556 (+)NCBINCBI36hg18NCBI36
Celera5171,767,411 - 171,770,526 (-)NCBI
Cytogenetic Map5q35.3NCBI
HuRef5171,651,496 - 171,654,693 (+)NCBIHuRef
CHM1_15176,163,805 - 176,167,002 (+)NCBICHM1_1
Prelid1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,469,868 - 55,473,085 (+)NCBIGRCm39mm39
GRCm381355,322,055 - 55,325,272 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,320,500 - 55,325,272 (+)EnsemblGRCm38mm10GRCm38
MGSCv371355,423,416 - 55,426,633 (+)NCBIGRCm37mm9NCBIm37
MGSCv361355,331,677 - 55,334,894 (+)NCBImm8
Celera1356,377,635 - 56,380,852 (+)NCBICelera
Cytogenetic Map13B1NCBI
Prelid1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2179,305,349 - 9,308,389 (-)NCBI
Rnor_6.0 Ensembl179,834,242 - 9,837,303 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0179,834,245 - 9,837,285 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01711,943,925 - 11,946,965 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41715,350,084 - 15,353,124 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11715,350,084 - 15,353,124 (-)NCBI
Celera179,383,719 - 9,386,759 (-)NCBICelera
Cytogenetic Map17p14NCBI
PRELID1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15179,669,885 - 179,672,965 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5179,669,885 - 179,672,965 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05172,605,767 - 172,608,901 (+)NCBIMhudiblu_PPA_v0panPan3
PRELID1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl436,051,879 - 36,055,043 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1436,051,562 - 36,055,080 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Prelid1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365971,580,849 - 1,584,445 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRELID1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl280,641,847 - 80,653,685 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1280,641,844 - 80,646,390 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2282,222,450 - 82,226,996 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRELID1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12379,313,442 - 79,316,788 (+)NCBI
Prelid1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473312,774,456 - 12,778,174 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000022650   ⟹   ENSCLAP00000022444
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540829,551,424 - 29,554,436 (+)Ensembl
RefSeq Acc Id: XM_005376421   ⟹   XP_005376478
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540829,551,256 - 29,554,778 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005376423   ⟹   XP_005376480
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540829,551,253 - 29,554,778 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005376478 (Get FASTA)   NCBI Sequence Viewer  
  XP_005376480 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005376480   ⟸   XM_005376423
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005376478   ⟸   XM_005376421
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000022444   ⟸   ENSCLAT00000022650


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000015398 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000022444 ENTREZGENE
Ensembl Transcript ENSCLAT00000022650 ENTREZGENE
NCBI Gene Prelid1 ENTREZGENE