Cblb (Cbl proto-oncogene B) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Cblb (Cbl proto-oncogene B) Chinchilla lanigera
Analyze
Symbol: Cblb
Name: Cbl proto-oncogene B
RGD ID: 9004883
Description: ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell proliferation (ortholog); cellular response to hydrogen peroxide (ortholog); immune response (ortholog); ASSOCIATED WITH Experimental Arthritis (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); Insulin Resistance (ortholog); FOUND IN cytosol (ortholog); membrane raft (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Cbl proto-oncogene B, E3 ubiquitin protein ligase; E3 ubiquitin-protein ligase CBL-B
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554276,604,820 - 6,812,882 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554276,601,651 - 6,812,896 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Cblb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554276,604,820 - 6,812,882 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554276,601,651 - 6,812,896 (-)NCBIChiLan1.0ChiLan1.0
CBLB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383105,655,461 - 105,869,449 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl3105,655,461 - 105,869,552 (-)EnsemblGRCh38hg38GRCh38
GRCh373105,374,305 - 105,588,245 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363106,859,799 - 107,070,577 (-)NCBINCBI36hg18NCBI36
Build 343106,859,798 - 107,070,577NCBI
Celera3103,775,519 - 103,986,437 (-)NCBI
Cytogenetic Map3q13.11NCBI
HuRef3102,751,829 - 102,962,841 (-)NCBIHuRef
CHM1_13105,340,227 - 105,551,366 (-)NCBICHM1_1
T2T-CHM13v2.03108,373,636 - 108,587,703 (-)NCBI
Cblb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391651,851,593 - 52,028,410 (+)NCBIGRCm39mm39
GRCm39 Ensembl1651,851,588 - 52,028,411 (+)Ensembl
GRCm381652,031,230 - 52,208,047 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1652,031,225 - 52,208,048 (+)EnsemblGRCm38mm10GRCm38
MGSCv371652,031,662 - 52,208,160 (+)NCBIGRCm37mm9NCBIm37
MGSCv361651,950,573 - 52,127,397 (+)NCBImm8
Celera1652,360,484 - 52,539,724 (+)NCBICelera
Cytogenetic Map16B5NCBI
Cblb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21148,589,878 - 48,756,940 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1148,592,703 - 48,756,839 (-)Ensembl
Rnor_6.01151,037,383 - 51,202,761 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1151,037,393 - 51,202,820 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01154,218,260 - 54,383,403 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41149,690,402 - 49,856,762 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11149,747,990 - 49,914,351 (-)NCBI
Celera1148,274,821 - 48,438,836 (-)NCBICelera
Cytogenetic Map11q21NCBI
CBLB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13109,690,120 - 109,905,306 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3109,690,120 - 109,905,191 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03102,752,406 - 102,966,414 (-)NCBIMhudiblu_PPA_v0panPan3
CBLB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13311,255,453 - 11,665,755 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3311,199,863 - 11,530,810 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3311,363,164 - 11,770,049 (-)NCBI
ROS_Cfam_1.03311,418,045 - 11,825,614 (-)NCBI
ROS_Cfam_1.0 Ensembl3311,418,236 - 11,631,415 (-)Ensembl
UMICH_Zoey_3.13311,285,163 - 11,691,897 (-)NCBI
UNSW_CanFamBas_1.03311,352,619 - 11,761,772 (-)NCBI
UU_Cfam_GSD_1.03311,761,341 - 12,168,419 (-)NCBI
Cblb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602145,313,740 - 145,509,343 (+)NCBI
SpeTri2.0NW_0049367011,157,790 - 1,353,375 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CBLB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13153,395,978 - 153,700,064 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113153,480,525 - 153,700,115 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213162,675,952 - 162,892,734 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CBLB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12274,961,831 - 75,181,307 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2274,961,859 - 75,178,548 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604191,314,990 - 91,530,969 (-)NCBIVero_WHO_p1.0
Cblb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473143,803,768 - 44,015,870 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462473143,803,743 - 44,018,682 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000014961   ⟹   ENSCLAP00000014802
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554276,604,820 - 6,812,882 (-)Ensembl
RefSeq Acc Id: XM_013515156   ⟹   XP_013370610
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554276,601,651 - 6,812,896 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013370610 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013370610   ⟸   XM_013515156
- Sequence:
RefSeq Acc Id: ENSCLAP00000014802   ⟸   ENSCLAT00000014961


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010209 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000014802 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000014961 ENTREZGENE, UniProtKB/TrEMBL
NCBI Gene Cblb ENTREZGENE
UniProt A0A8C2VJD7_CHILA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Cblb  Cbl proto-oncogene B    Cbl proto-oncogene B, E3 ubiquitin protein ligase  Symbol and/or name change 5135510 APPROVED